+D GENES KO
#
KEGG Orthology (KO) - Streptococcus ratti
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:srat00010]
D FY406_05285 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D FY406_01630 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D FY406_09415 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D FY406_07000 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D FY406_03820 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_05140 class II fructose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_07380 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_06910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D FY406_01315 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D FY406_01300 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D FY406_00775 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D FY406_07440 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D FY406_09410 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D FY406_05160 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D FY406_03475 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D FY406_03480 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D FY406_03485 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D FY406_09900 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_03525 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D FY406_08510 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_09780 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_08925 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D FY406_00410 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D FY406_00405 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D FY406_03675 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D FY406_06515 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D FY406_08885 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D FY406_09030 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:srat00020]
D FY406_00440 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D FY406_00445 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D FY406_00435 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_00405 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D FY406_03475 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D FY406_03480 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D FY406_03485 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D FY406_09900 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:srat00030]
D FY406_01630 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D FY406_01145 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D FY406_01365 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D FY406_01770 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D FY406_09665 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D FY406_01140 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D FY406_01860 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D FY406_09140 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D FY406_09660 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D FY406_08925 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D FY406_03010 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D FY406_08675 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D FY406_04045 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D FY406_00410 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D FY406_03820 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_05140 class II fructose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_07380 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_07000 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D FY406_09415 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:srat00040]
D FY406_01565 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D FY406_01840 3-keto-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D FY406_01835 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D FY406_01830 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D FY406_01145 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D FY406_01365 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D FY406_01160 sugar phosphate isomerase/epimerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D FY406_01865 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:srat00051]
D FY406_04695 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D FY406_04700 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D FY406_09415 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D FY406_07000 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D FY406_09375 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D FY406_01625 SDR family oxidoreductase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D FY406_08130 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D FY406_01865 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D FY406_01160 sugar phosphate isomerase/epimerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D FY406_03820 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_05140 class II fructose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_07380 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_06910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D FY406_01140 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D FY406_01715 ribulose-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D FY406_01725 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_03645 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_07365 PTS mannose transporter subunit IIAB K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_09755 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_01730 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_03650 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_07370 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_01720 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_03655 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_07375 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_08135 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_09760 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_04550 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D FY406_04250 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D FY406_04545 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D FY406_04540 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D FY406_09380 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D FY406_09390 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D FY406_01600 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D FY406_01605 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D FY406_01610 srlA; PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:srat00052]
D FY406_01220 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D FY406_01215 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D FY406_01210 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D FY406_02225 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D FY406_01565 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D FY406_08925 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D FY406_05285 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D FY406_09605 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D FY406_01260 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D FY406_01880 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D FY406_01875 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D FY406_01870 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D FY406_10240 tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D FY406_09415 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D FY406_09750 lacD; tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D FY406_10235 lacD; tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D FY406_10245 lacB; galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D FY406_10250 lacA; galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D FY406_10200 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D FY406_10210 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D FY406_10205 PTS lactose transporter subunit IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D FY406_04675 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D FY406_04685 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D FY406_04240 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
C 00053 Ascorbate and aldarate metabolism [PATH:srat00053]
D FY406_01845 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D FY406_01850 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D FY406_05125 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D FY406_01855 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D FY406_05130 PTS sugar transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D FY406_01775 ulaG; L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D FY406_01840 3-keto-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D FY406_01835 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D FY406_01830 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D FY406_02025 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D FY406_02035 glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D FY406_02030 mandelate racemase/muconate lactonizing enzyme family protein K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:srat00500]
D FY406_04690 PTS beta-glucoside transporter subunit IIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D FY406_04675 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D FY406_04685 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D FY406_01950 glycoside hydrolase 68 family protein K20811 inuJ; inulosucrase [EC:2.4.1.9]
D FY406_08205 glucosyltransferase K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D FY406_08815 glucosyltransferase K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D FY406_01240 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D FY406_01565 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D FY406_06535 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D FY406_06525 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D FY406_06545 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D FY406_03675 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D FY406_06515 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D FY406_08885 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D FY406_09030 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D FY406_00160 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D FY406_00165 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D FY406_00155 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D FY406_00170 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D FY406_00150 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D FY406_00250 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D FY406_00175 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D FY406_06580 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D FY406_02110 LPXTG cell wall anchor domain-containing protein K05988 dexA; dextranase [EC:3.2.1.11]
D FY406_00255 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D FY406_02135 PTS glucose/maltose transporter subunit IIBCA K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D FY406_02130 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D FY406_02100 treB; PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D FY406_02095 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D FY406_08925 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D FY406_05285 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D FY406_01630 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D FY406_04695 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:srat00520]
D FY406_05475 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D FY406_00630 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D FY406_04695 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D FY406_09395 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D FY406_09925 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D FY406_06335 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D FY406_00100 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D FY406_00285 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D FY406_08570 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D FY406_09975 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D FY406_05285 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D FY406_08925 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D FY406_01565 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D FY406_01220 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D FY406_01215 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D FY406_01210 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D FY406_02225 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D FY406_09605 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D FY406_04550 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D FY406_04250 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D FY406_04545 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D FY406_04540 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D FY406_01630 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D FY406_04700 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D FY406_00160 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D FY406_00165 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:srat00620]
D FY406_03475 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D FY406_03480 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D FY406_03485 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D FY406_09900 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_01015 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D FY406_07995 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D FY406_03525 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D FY406_08510 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_09780 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_04180 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D FY406_08700 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D FY406_08010 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D FY406_09410 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D FY406_05865 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D FY406_05845 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D FY406_03090 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D FY406_05855 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D FY406_05860 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D FY406_05905 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D FY406_06280 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D FY406_06500 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D FY406_09050 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D FY406_07025 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D FY406_08730 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D FY406_08755 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D FY406_07155 NAD-dependent malic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D FY406_06895 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D FY406_00405 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D FY406_05160 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D FY406_00380 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:srat00630]
D FY406_00440 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D FY406_00445 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D FY406_07420 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D FY406_01285 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D FY406_08950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_02010 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D FY406_02015 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D FY406_04045 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D FY406_02485 cupin domain-containing protein K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
C 00640 Propanoate metabolism [PATH:srat00640]
D FY406_04180 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D FY406_08700 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D FY406_08010 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_01015 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D FY406_05865 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D FY406_05845 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D FY406_03090 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D FY406_05855 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D FY406_05860 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D FY406_03990 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
C 00650 Butanoate metabolism [PATH:srat00650]
D FY406_07995 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D FY406_03525 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D FY406_08755 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D FY406_08760 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D FY406_02610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D FY406_01015 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D FY406_08395 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D FY406_03845 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D FY406_10035 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D FY406_03850 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D FY406_10030 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D FY406_07030 (S)-acetoin forming diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:srat00660]
D FY406_03845 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D FY406_10035 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D FY406_03850 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D FY406_10030 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D FY406_00365 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D FY406_00360 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D FY406_00375 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:srat00562]
D FY406_09220 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D FY406_06910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:srat00190]
D FY406_00125 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D FY406_00115 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D FY406_00120 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D FY406_00130 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D FY406_00110 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D FY406_00140 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D FY406_00135 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D FY406_00145 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D FY406_01445 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D FY406_01440 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D FY406_01455 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D FY406_01435 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D FY406_01460 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D FY406_01450 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D FY406_01475 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D FY406_01470 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D FY406_01465 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D FY406_06070 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:srat00680]
D FY406_08950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D FY406_07440 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D FY406_06895 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D FY406_03820 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_05140 class II fructose-bisphosphate aldolase family protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_07380 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D FY406_07000 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D FY406_09415 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D FY406_04180 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D FY406_08700 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D FY406_00775 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D FY406_06250 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D FY406_06240 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D FY406_07325 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:srat00910]
D FY406_08215 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D FY406_01285 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D FY406_01280 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D FY406_01275 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D FY406_01910 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D FY406_02370 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D FY406_01540 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:srat00920]
D FY406_00565 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D FY406_00555 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D FY406_00560 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D FY406_07215 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D FY406_03565 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D FY406_05690 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D FY406_10110 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D FY406_06135 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:srat00061]
D FY406_05865 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D FY406_05845 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D FY406_03090 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D FY406_05855 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D FY406_05860 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D FY406_03030 acyl carrier protein K02078 acpP; acyl carrier protein
D FY406_05820 acyl carrier protein K02078 acpP; acyl carrier protein
D FY406_05830 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D FY406_05815 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D FY406_05840 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D FY406_05835 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D FY406_05850 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D FY406_05825 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D FY406_05805 enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D FY406_03525 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D FY406_08510 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_09780 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:srat00561]
D FY406_02015 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D FY406_04490 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D FY406_03025 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D FY406_09515 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D FY406_00685 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D FY406_00180 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D FY406_06590 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D FY406_06585 glycosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D FY406_07495 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D FY406_01260 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:srat00564]
D FY406_01560 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D FY406_09515 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D FY406_00685 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D FY406_09580 tagD; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D FY406_00180 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D FY406_00345 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D FY406_06990 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D FY406_07970 eutA; ethanolamine ammonia-lyase reactivating factor EutA K04019 eutA; ethanolamine utilization protein EutA
D FY406_07975 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D FY406_07980 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D FY406_04905 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D FY406_02715 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D FY406_08875 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:srat00600]
D FY406_01260 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:srat00230]
D FY406_06340 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D FY406_09660 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D FY406_08925 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D FY406_03010 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D FY406_08675 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D FY406_03045 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D FY406_03130 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D FY406_03055 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D FY406_03040 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D FY406_03050 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D FY406_03140 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D FY406_03135 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D FY406_03035 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D FY406_03170 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D FY406_03060 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D FY406_10115 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D FY406_09650 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D FY406_09635 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D FY406_02870 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D FY406_02745 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D FY406_05940 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D FY406_08605 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D FY406_09640 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D FY406_05630 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D FY406_00455 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D FY406_00460 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D FY406_02275 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D FY406_02125 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D FY406_08295 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D FY406_08685 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D FY406_01900 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D FY406_07230 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D FY406_00010 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D FY406_03335 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D FY406_01910 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D FY406_02370 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:srat00240]
D FY406_08080 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D FY406_08075 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D FY406_08070 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D FY406_09525 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D FY406_09565 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D FY406_09570 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D FY406_00795 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D FY406_09555 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D FY406_09560 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D FY406_06390 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D FY406_03805 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D FY406_07475 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D FY406_00390 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D FY406_06150 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D FY406_08065 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D FY406_00010 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D FY406_09145 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D FY406_09135 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D FY406_02275 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D FY406_00455 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D FY406_00460 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D FY406_04655 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D FY406_06205 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D FY406_01555 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D FY406_08970 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D FY406_08400 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D FY406_08715 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:srat00250]
D FY406_04740 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D FY406_07090 pyridoxal phosphate-dependent aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D FY406_04395 carbon-nitrogen family hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D FY406_04760 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D FY406_10170 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D FY406_01510 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D FY406_01505 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D FY406_01900 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D FY406_03170 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D FY406_08070 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D FY406_02610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D FY406_01280 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D FY406_01275 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D FY406_08215 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D FY406_01285 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D FY406_08080 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D FY406_08075 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D FY406_09395 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D FY406_03045 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:srat00260]
D FY406_05795 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D FY406_08870 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D FY406_08530 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D FY406_08535 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D FY406_03205 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D FY406_08950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D FY406_02015 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D FY406_00775 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D FY406_06250 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D FY406_06240 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D FY406_07325 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D FY406_08715 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_03860 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D FY406_03150 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D FY406_05265 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D FY406_05260 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:srat00270]
D FY406_03565 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D FY406_05690 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D FY406_06140 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D FY406_08435 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D FY406_08145 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D FY406_08140 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D FY406_00290 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D FY406_06350 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D FY406_00320 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D FY406_05620 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D FY406_05795 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D FY406_08870 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D FY406_08530 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D FY406_10110 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D FY406_06135 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D FY406_09330 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D FY406_09495 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D FY406_01905 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D FY406_03150 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D FY406_06250 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D FY406_06240 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:srat00280]
D FY406_09495 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_08395 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:srat00290]
D FY406_03860 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D FY406_00365 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D FY406_00360 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D FY406_00375 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D FY406_03845 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D FY406_10035 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D FY406_03850 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D FY406_03855 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D FY406_02620 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D FY406_09495 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D FY406_04760 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D FY406_00380 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:srat00300]
D FY406_08530 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D FY406_05795 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D FY406_08870 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D FY406_02020 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D FY406_06945 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D FY406_08865 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D FY406_08170 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D FY406_01585 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D FY406_00485 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D FY406_04380 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D FY406_05925 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D FY406_03015 pyridoxal phosphate-dependent aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D FY406_01580 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D FY406_00750 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:srat00310]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_03150 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D FY406_02610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:srat00220]
D FY406_00920 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D FY406_02375 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D FY406_01510 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D FY406_01505 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D FY406_02380 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D FY406_01285 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D FY406_08215 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D FY406_01910 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D FY406_02370 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D FY406_04760 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D FY406_00495 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D FY406_00490 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D FY406_00500 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D FY406_00485 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:srat00330]
D FY406_01915 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D FY406_09545 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D FY406_04190 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D FY406_05500 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D FY406_05505 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:srat00340]
D FY406_07315 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D FY406_07310 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D FY406_07355 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D FY406_07350 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D FY406_07340 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D FY406_07335 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D FY406_07345 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D FY406_07330 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D FY406_07305 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D FY406_10185 hypothetical protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D FY406_07320 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D FY406_03685 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism [PATH:srat00350]
D FY406_07305 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D FY406_03525 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D FY406_08510 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_09780 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_02610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:srat00360]
D FY406_07305 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D FY406_09545 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:srat00380]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09545 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:srat00400]
D FY406_04710 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D FY406_04715 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D FY406_07515 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D FY406_07505 type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D FY406_07575 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D FY406_07580 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D FY406_07520 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D FY406_05235 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D FY406_05240 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D FY406_05245 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D FY406_05255 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D FY406_05250 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D FY406_05265 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D FY406_05260 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D FY406_07250 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D FY406_07525 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D FY406_07585 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D FY406_07305 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:srat00430]
D FY406_10170 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D FY406_08700 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D FY406_08010 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D FY406_04180 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:srat00450]
D FY406_06135 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D FY406_06140 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D FY406_08145 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D FY406_08140 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D FY406_03975 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D FY406_05560 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D FY406_06300 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:srat00460]
D FY406_04740 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D FY406_08950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:srat00470]
D FY406_04725 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D FY406_00760 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D FY406_07625 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D FY406_07635 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D FY406_03150 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D FY406_05935 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D FY406_00990 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D FY406_05925 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:srat00480]
D FY406_03095 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D FY406_01905 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D FY406_09180 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D FY406_02490 NAD(P)/FAD-dependent oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D FY406_06815 NAD(P)/FAD-dependent oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D FY406_07840 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D FY406_00435 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:srat00542]
D FY406_03960 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:srat00541]
D FY406_01565 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D FY406_01210 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D FY406_02225 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D FY406_09605 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D FY406_10085 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D FY406_10070 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D FY406_10080 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D FY406_07780 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D FY406_04700 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D FY406_06335 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D FY406_09975 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:srat00550]
D FY406_00100 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D FY406_00285 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D FY406_08570 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D FY406_05880 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D FY406_00990 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D FY406_00760 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D FY406_00750 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D FY406_06440 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D FY406_04900 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D FY406_03950 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D FY406_06015 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D FY406_05525 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D FY406_00985 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D FY406_05585 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D FY406_04285 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D FY406_04015 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D FY406_00720 YSIRK-type signal peptide-containing protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_03725 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_06125 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D FY406_09940 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D FY406_09945 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D FY406_06920 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D FY406_06915 aminoacyltransferase K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D FY406_04105 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D FY406_00770 penicillin-binding protein 2 K00687 pbp2B; penicillin-binding protein 2B
D FY406_05520 penicillin-binding protein K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:srat00552]
D FY406_03950 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D FY406_06015 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D FY406_03960 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D FY406_07895 gtfA; accessory Sec system glycosyltransferase GtfA K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D FY406_07625 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D FY406_07635 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D FY406_07630 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D FY406_07640 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D FY406_07590 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D FY406_05340 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D FY406_09620 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D FY406_07495 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D FY406_06590 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D FY406_09575 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D FY406_09585 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:srat00543]
D FY406_03960 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D FY406_03565 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:srat00730]
D FY406_07855 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_08670 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_07860 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D FY406_01370 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D FY406_01360 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D FY406_03335 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:srat00740]
D FY406_00470 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D FY406_00480 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D FY406_05315 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D FY406_00465 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D FY406_00475 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D FY406_09235 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D FY406_06340 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:srat00750]
D FY406_03765 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D FY406_08445 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D FY406_06240 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D FY406_03205 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:srat00760]
D FY406_05570 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D FY406_09650 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D FY406_09635 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D FY406_04820 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D FY406_05575 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D FY406_08690 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D FY406_02610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:srat00770]
D FY406_03845 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D FY406_10035 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D FY406_03850 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D FY406_03855 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D FY406_02620 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D FY406_09155 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D FY406_08910 phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D FY406_08915 coaC; phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D FY406_05170 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D FY406_06465 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D FY406_04720 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D FY406_09495 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:srat00780]
D FY406_05840 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D FY406_05835 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D FY406_05850 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D FY406_00305 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:srat00785]
D FY406_03495 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_03475 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D FY406_03480 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D FY406_03485 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D FY406_09900 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:srat00790]
D FY406_08550 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D FY406_08560 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D FY406_08565 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D FY406_08555 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D FY406_08410 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D FY406_07845 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D FY406_08545 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D FY406_00470 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D FY406_08250 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D FY406_08245 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D FY406_08255 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D FY406_08240 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:srat00670]
D FY406_08410 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D FY406_08905 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D FY406_00885 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D FY406_08950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D FY406_03055 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D FY406_03060 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D FY406_05645 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D FY406_08145 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D FY406_08400 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D FY406_01575 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:srat00860]
D FY406_07945 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D FY406_04310 bacterioferritin (cytochrome b1) K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:srat00130]
D FY406_09895 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D FY406_06685 NAD(P)H-binding protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D FY406_07670 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:srat00900]
D FY406_04080 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D FY406_08395 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D FY406_08390 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D FY406_03690 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D FY406_08370 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D FY406_08365 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D FY406_08375 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D FY406_00845 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D FY406_04900 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D FY406_01770 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:srat00523]
D FY406_10085 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D FY406_10070 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D FY406_10080 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D FY406_07780 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D FY406_05230 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D FY406_10070 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:srat00332]
D FY406_05500 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D FY406_05505 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:srat00261]
D FY406_05795 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D FY406_08870 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D FY406_02020 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D FY406_06945 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D FY406_08865 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D FY406_08170 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:srat00521]
D FY406_05285 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D FY406_08925 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D FY406_09220 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D FY406_10085 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D FY406_10070 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D FY406_10080 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D FY406_07780 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D FY406_05285 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:srat00525]
D FY406_10085 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D FY406_10070 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:srat00401]
D FY406_07525 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D FY406_07305 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D FY406_05235 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D FY406_05240 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D FY406_05830 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D FY406_05835 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D FY406_03030 acyl carrier protein K02078 acpP; acyl carrier protein
D FY406_05820 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D FY406_00290 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:srat00362]
D FY406_08975 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D FY406_08505 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D FY406_08755 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D FY406_08760 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
C 00627 Aminobenzoate degradation [PATH:srat00627]
D FY406_09545 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D FY406_05905 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:srat00625]
D FY406_08510 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_09780 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_03525 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D FY406_08975 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:srat00643]
D FY406_09545 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D FY406_08975 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:srat00626]
D FY406_08510 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_09780 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D FY406_03525 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:srat03020]
D FY406_04110 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D FY406_04115 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D FY406_03360 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D FY406_05635 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D FY406_03800 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:srat03010]
D FY406_09475 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D FY406_01970 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D FY406_03255 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D FY406_02650 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D FY406_03315 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D FY406_04610 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D FY406_01325 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D FY406_03295 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D FY406_03625 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D FY406_03215 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D FY406_03355 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D FY406_01330 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D FY406_03350 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D FY406_03290 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D FY406_03530 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D FY406_08100 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D FY406_03270 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D FY406_04620 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D FY406_03245 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D FY406_09160 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D FY406_07750 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D FY406_06385 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D FY406_03240 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D FY406_03225 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D FY406_03230 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D FY406_03285 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D FY406_03305 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D FY406_08470 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D FY406_02665 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D FY406_08465 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D FY406_06380 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D FY406_03620 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D FY406_03275 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D FY406_03325 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D FY406_03260 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D FY406_03365 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D FY406_03310 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D FY406_07265 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D FY406_07490 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D FY406_07920 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D FY406_03250 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D FY406_03235 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D FY406_03280 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D FY406_07930 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D FY406_03830 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D FY406_03265 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D FY406_03320 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D FY406_07205 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D FY406_02435 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D FY406_02440 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D FY406_04290 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D FY406_06480 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D FY406_01485 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D FY406_07485 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D FY406_03345 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D FY406_05730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_04050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_03375 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_02890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_04925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_02900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_03385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_04060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_04935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_05740 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_04065 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_05745 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_04940 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_03390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_02905 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:srat00970]
D FY406_02895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_04055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_04930 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_05735 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_03380 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_05785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_07270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_09460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_02775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_02945 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_04070 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D FY406_02765 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D FY406_05755 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D FY406_02915 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D FY406_04950 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D FY406_01975 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D FY406_09480 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D FY406_03445 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D FY406_02770 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D FY406_04975 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D FY406_03410 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D FY406_02935 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D FY406_02980 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D FY406_05775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D FY406_03400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D FY406_03440 tRNA-His K14226 tRNA-His; tRNA His
D FY406_02985 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D FY406_04970 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D FY406_03405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D FY406_02925 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_03450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_04960 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_05780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_01375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_02940 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_03815 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_05765 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_05760 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D FY406_02180 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D FY406_02920 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D FY406_04955 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D FY406_03420 tRNA-Met K14230 tRNA-Met; tRNA Met
D FY406_02955 tRNA-Met K14230 tRNA-Met; tRNA Met
D FY406_02970 tRNA-Met K14230 tRNA-Met; tRNA Met
D FY406_02960 tRNA-Ile K14230 tRNA-Met; tRNA Met
D FY406_02975 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D FY406_03425 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D FY406_05790 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D FY406_02950 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D FY406_01380 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_05375 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_02990 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_02965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_03415 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_05770 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_05020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_03825 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_04965 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_02930 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_03435 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D FY406_09485 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D FY406_03430 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D FY406_04945 tRNA-Val K14237 tRNA-Val; tRNA Val
D FY406_03395 tRNA-Val K14237 tRNA-Val; tRNA Val
D FY406_05750 tRNA-Val K14237 tRNA-Val; tRNA Val
D FY406_02910 tRNA-Val K14237 tRNA-Val; tRNA Val
D FY406_01530 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D FY406_04785 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D FY406_04790 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D FY406_04780 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D FY406_00585 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D FY406_02415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D FY406_04775 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D FY406_07095 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D FY406_05480 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D FY406_05485 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D FY406_06600 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D FY406_04510 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D FY406_03570 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D FY406_06300 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D FY406_05645 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D FY406_05060 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D FY406_04315 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D FY406_00940 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D FY406_06830 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D FY406_02400 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D FY406_04915 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D FY406_02420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D FY406_00015 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D FY406_04100 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D FY406_02750 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:srat03060]
D FY406_03330 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D FY406_07870 accessory Sec system protein translocase subunit SecY2 K03076 secY; preprotein translocase subunit SecY
D FY406_04295 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D FY406_06485 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D FY406_04890 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D FY406_01495 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_05900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_04705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D FY406_07890 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D FY406_08635 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D FY406_01640 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D FY406_06640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D FY406_04565 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D FY406_09400 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D FY406_08050 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:srat04122]
D FY406_07855 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_08670 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_02685 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D FY406_07860 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:srat03018]
D FY406_07440 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D FY406_03555 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D FY406_06490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D FY406_00715 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D FY406_05625 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D FY406_01200 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D FY406_10000 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D FY406_09415 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D FY406_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D FY406_04270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:srat03030]
D FY406_09420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D FY406_03455 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D FY406_00315 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D FY406_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D FY406_00665 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D FY406_02810 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D FY406_02660 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D FY406_07765 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D FY406_04215 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_04615 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_08840 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D FY406_04570 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D FY406_01675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D FY406_00185 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:srat03410]
D FY406_06265 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D FY406_09530 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D FY406_04600 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D FY406_02605 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D FY406_06460 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D FY406_02330 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D FY406_06285 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D FY406_01675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D FY406_10125 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D FY406_00185 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:srat03420]
D FY406_02840 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D FY406_04640 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D FY406_07715 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D FY406_09705 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D FY406_09335 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D FY406_01675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D FY406_00185 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:srat03430]
D FY406_02345 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D FY406_04585 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D FY406_02340 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D FY406_09335 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D FY406_00855 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D FY406_00850 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D FY406_10125 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D FY406_04215 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_04615 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_09420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D FY406_03455 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D FY406_02810 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D FY406_00315 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D FY406_00665 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D FY406_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D FY406_00185 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D FY406_03125 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:srat03440]
D FY406_10125 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D FY406_04215 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_04615 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_02740 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D FY406_03020 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D FY406_00765 recR; recombination protein RecR K06187 recR; recombination protein RecR
D FY406_02320 recA; recombinase RecA K03553 recA; recombination protein RecA
D FY406_01675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D FY406_02335 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D FY406_03180 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D FY406_04730 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D FY406_04560 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D FY406_09420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D FY406_03455 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D FY406_02810 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D FY406_00315 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D FY406_00665 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D FY406_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D FY406_05640 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:srat03250]
D FY406_06355 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:srat02010]
D FY406_00565 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D FY406_00555 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D FY406_00560 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D FY406_08590 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D FY406_08585 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D FY406_08580 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D FY406_08575 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D FY406_08625 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D FY406_08620 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D FY406_02595 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D FY406_09005 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D FY406_02590 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D FY406_02600 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D FY406_02585 betaine/proline/choline family ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D FY406_09010 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D FY406_00280 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D FY406_01235 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D FY406_00265 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D FY406_00270 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D FY406_00275 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D FY406_01255 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D FY406_01250 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D FY406_01245 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D FY406_09130 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D FY406_09120 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D FY406_09115 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D FY406_09125 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D FY406_04220 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D FY406_09210 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D FY406_09205 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D FY406_09200 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D FY406_09190 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D FY406_09195 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D FY406_07710 ABC transporter permease subunit K10036 glnH; glutamine transport system substrate-binding protein
D FY406_07705 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_00075 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D FY406_00080 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D FY406_00085 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D FY406_00070 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_05540 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_09540 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_04370 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_09535 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D FY406_05545 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D FY406_05550 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_08345 transporter substrate-binding domain-containing protein K16956 tcyJ; L-cystine transport system substrate-binding protein
D FY406_08325 amino acid ABC transporter substrate-binding protein K16957 tcyK; L-cystine transport system substrate-binding protein
D FY406_08330 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D FY406_08335 amino acid ABC transporter permease K16959 tcyM; L-cystine transport system permease protein
D FY406_08340 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_07740 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D FY406_07745 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D FY406_00910 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D FY406_00905 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_03895 ABC transporter substrate-binding protein/permease K17073 lysX1; putative lysine transport system substrate-binding protein
D FY406_03890 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D FY406_06170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D FY406_06175 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D FY406_06180 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D FY406_06185 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D FY406_06190 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D FY406_04375 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D FY406_04390 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D FY406_04385 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D FY406_04020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D FY406_04025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D FY406_04030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D FY406_04035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D FY406_04040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D FY406_07185 zinc ABC transporter substrate-binding protein AdcA K09815 znuA; zinc transport system substrate-binding protein
D FY406_04095 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D FY406_04090 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D FY406_04755 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D FY406_02700 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D FY406_04415 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D FY406_02710 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D FY406_02705 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D FY406_05460 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D FY406_05455 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D FY406_09260 ABC transporter permease K20460 nukE; lantibiotic transport system permease protein
D FY406_09265 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D FY406_09255 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D FY406_00545 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D FY406_00540 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D FY406_00550 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D FY406_08805 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D FY406_08810 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D FY406_07020 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D FY406_07015 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D FY406_05200 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_05205 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08935 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08190 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08265 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08270 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08930 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08195 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_01795 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D FY406_04535 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS) [PATH:srat02060]
D FY406_00415 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D FY406_00420 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D FY406_02135 PTS glucose/maltose transporter subunit IIBCA K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D FY406_04690 PTS beta-glucoside transporter subunit IIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D FY406_01155 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D FY406_03670 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D FY406_08600 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D FY406_02100 treB; PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D FY406_09380 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D FY406_09390 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D FY406_10210 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D FY406_10205 PTS lactose transporter subunit IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D FY406_06535 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D FY406_06525 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D FY406_06545 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D FY406_04550 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D FY406_04250 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D FY406_04545 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D FY406_04540 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D FY406_04240 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D FY406_01600 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D FY406_01605 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D FY406_01610 srlA; PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D FY406_01880 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D FY406_01875 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D FY406_01870 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D FY406_10230 PTS sugar transporter subunit IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D FY406_10225 PTS fructose transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D FY406_10220 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component
D FY406_01845 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D FY406_01850 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D FY406_05125 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D FY406_01855 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D FY406_05130 PTS sugar transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D FY406_01720 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_03655 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_07375 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_08135 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_09760 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_01730 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_03650 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_07370 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_01725 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_03645 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_07365 PTS mannose transporter subunit IIAB K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_09755 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_08130 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D FY406_01735 hypothetical protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:srat03070]
D FY406_04295 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D FY406_06485 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D FY406_03330 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D FY406_07870 accessory Sec system protein translocase subunit SecY2 K03076 secY; preprotein translocase subunit SecY
D FY406_04890 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D FY406_01495 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_05900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_04705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D FY406_07890 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D FY406_06640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D FY406_08635 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:srat02020]
D FY406_03635 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D FY406_09210 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D FY406_02795 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D FY406_00060 vicK; cell wall metabolism sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D FY406_00065 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D FY406_08205 glucosyltransferase K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D FY406_08815 glucosyltransferase K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D FY406_02805 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D FY406_08805 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D FY406_08810 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D FY406_08795 HAMP domain-containing histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D FY406_08800 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D FY406_07625 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D FY406_07630 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D FY406_07635 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D FY406_07640 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D FY406_08305 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D FY406_09165 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D FY406_09170 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D FY406_00720 YSIRK-type signal peptide-containing protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_03725 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_07565 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW
D FY406_04450 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D FY406_00530 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D FY406_00535 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D FY406_00550 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D FY406_00545 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D FY406_00540 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D FY406_08790 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D FY406_08750 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D FY406_08745 citE; citrate (pro-3S)-lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D FY406_08740 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D FY406_08735 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D FY406_08780 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D FY406_00860 sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D FY406_00865 response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D FY406_00870 murein hydrolase transporter LrgA K05338 lrgA; holin-like protein
D FY406_00875 lrgB; antiholin-like protein LrgB K05339 lrgB; holin-like protein LrgB
D FY406_04075 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
D FY406_02860 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D FY406_00205 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D FY406_00200 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D FY406_05670 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D FY406_05675 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D FY406_06235 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D FY406_01285 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D FY406_03185 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D FY406_09975 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:srat02024]
D FY406_05620 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D FY406_05235 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D FY406_05240 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D FY406_04710 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D FY406_04715 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D FY406_01920 APC family permease K20265 gadC; glutamate:GABA antiporter
D FY406_06170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D FY406_06175 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D FY406_06180 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D FY406_06185 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D FY406_06190 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D FY406_00480 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D FY406_08290 hypothetical protein K20341 blpL; immunity protein
D FY406_08305 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D FY406_09165 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D FY406_09170 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D FY406_04020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D FY406_04025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D FY406_04030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D FY406_04035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D FY406_04040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D FY406_03175 helix-turn-helix transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D FY406_03940 helix-turn-helix transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D FY406_04075 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
D FY406_01795 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D FY406_04535 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D FY406_01790 HlyD family efflux transporter periplasmic adaptor subunit K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D FY406_02090 Rgg/GadR/MutR family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D FY406_04320 helix-turn-helix domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D FY406_09750 lacD; tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D FY406_10235 lacD; tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D FY406_01495 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_05900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_04295 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D FY406_06485 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D FY406_03330 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D FY406_07870 accessory Sec system protein translocase subunit SecY2 K03076 secY; preprotein translocase subunit SecY
D FY406_04890 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D FY406_04705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D FY406_07890 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D FY406_06640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D FY406_08635 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D FY406_00530 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D FY406_00535 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D FY406_00550 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D FY406_00545 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D FY406_00540 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D FY406_04220 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:srat02040]
D FY406_05540 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_09540 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_04370 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_07770 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D FY406_07440 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D FY406_07945 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:srat01501]
D FY406_02860 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D FY406_04020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D FY406_04025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D FY406_04030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D FY406_04035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D FY406_04040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D FY406_05585 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D FY406_04105 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D FY406_04285 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D FY406_00770 penicillin-binding protein 2 K00687 pbp2B; penicillin-binding protein 2B
D FY406_05520 penicillin-binding protein K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:srat01502]
D FY406_00760 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D FY406_04725 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D FY406_00750 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D FY406_05525 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D FY406_00985 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D FY406_00720 YSIRK-type signal peptide-containing protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_03725 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_07565 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:srat01503]
D FY406_02795 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D FY406_06355 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D FY406_07625 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D FY406_07630 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D FY406_07635 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D FY406_07640 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:srat01000]
C 01001 Protein kinases [BR:srat01001]
D FY406_05660 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D FY406_03635 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D FY406_00060 vicK; cell wall metabolism sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D FY406_08795 HAMP domain-containing histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D FY406_08305 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D FY406_09165 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D FY406_00530 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D FY406_00205 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D FY406_05670 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D FY406_00860 sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D FY406_07965 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:srat01009]
D FY406_09415 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D FY406_05655 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D FY406_07325 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:srat01002]
D FY406_08050 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D FY406_05580 pepC; aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D FY406_08605 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D FY406_09640 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D FY406_08655 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D FY406_01795 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D FY406_04535 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D FY406_01205 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D FY406_03005 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D FY406_03045 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D FY406_01280 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D FY406_09395 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D FY406_09090 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D FY406_07140 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D FY406_00505 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D FY406_02195 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D FY406_03155 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D FY406_04185 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D FY406_07600 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D FY406_09180 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D FY406_00610 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D FY406_02055 endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D FY406_00720 YSIRK-type signal peptide-containing protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_03725 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_09685 pepV; dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D FY406_04380 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D FY406_07455 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D FY406_01580 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D FY406_00225 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D FY406_06570 aminopeptidase P family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D FY406_04650 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D FY406_02875 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D FY406_04195 pepA; glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D FY406_04440 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D FY406_04910 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D FY406_03925 hypothetical protein K16922 yydH; putative peptide zinc metalloprotease protein
D FY406_02795 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D FY406_04015 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D FY406_06155 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D FY406_01040 Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D FY406_05175 PDZ domain-containing protein K07177 K07177; Lon-like protease
D FY406_03705 helix-turn-helix domain-containing protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D FY406_04565 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D FY406_09400 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D FY406_00325 peptidase S51 K05995 pepE; dipeptidase E [EC:3.4.13.21]
D FY406_01980 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D FY406_06770 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:srat01003]
D FY406_06590 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D FY406_06585 glycosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D FY406_00155 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D FY406_05585 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D FY406_04105 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D FY406_04285 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D FY406_07895 gtfA; accessory Sec system glycosyltransferase GtfA K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D FY406_03960 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:srat01005]
D FY406_07785 glycosyltransferase family 1 protein K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D FY406_07790 glycosyltransferase family 2 protein K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D FY406_07805 glycosyltransferase K12998 rgpE; glucosyltransferase [EC:2.4.1.-]
D FY406_07810 alpha-L-Rha alpha-1,3-L-rhamnosyltransferase K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D FY406_02235 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D FY406_07825 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D FY406_03960 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:srat01011]
D FY406_00100 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D FY406_00285 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D FY406_08570 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D FY406_05880 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D FY406_00990 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D FY406_06125 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D FY406_00760 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D FY406_06920 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D FY406_06915 aminoacyltransferase K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D FY406_04725 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D FY406_05935 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D FY406_01980 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D FY406_05525 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D FY406_00985 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D FY406_03950 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D FY406_06015 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D FY406_05585 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D FY406_04105 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D FY406_04285 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D FY406_00770 penicillin-binding protein 2 K00687 pbp2B; penicillin-binding protein 2B
D FY406_05520 penicillin-binding protein K12556 pbp2X; penicillin-binding protein 2X
D FY406_04015 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D FY406_00720 YSIRK-type signal peptide-containing protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_03725 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_01205 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D FY406_03005 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D FY406_09090 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D FY406_05890 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:srat01004]
D FY406_05830 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D FY406_05815 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D FY406_05840 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D FY406_05835 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D FY406_05850 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D FY406_05825 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D FY406_05805 enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D FY406_03025 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D FY406_09515 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D FY406_00685 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:srat01008]
C 01006 Prenyltransferases [BR:srat01006]
D FY406_00845 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D FY406_04900 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D FY406_10150 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:srat01007]
D FY406_01530 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D FY406_04100 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D FY406_02750 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D FY406_03570 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D FY406_02400 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D FY406_06300 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D FY406_00940 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D FY406_05060 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D FY406_04315 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D FY406_06830 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D FY406_02415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D FY406_04775 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D FY406_07095 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D FY406_02420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D FY406_05480 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D FY406_05485 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D FY406_04510 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D FY406_04915 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D FY406_06600 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D FY406_00585 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D FY406_00015 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D FY406_04760 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D FY406_03015 pyridoxal phosphate-dependent aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D FY406_07305 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D FY406_06140 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D FY406_00485 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D FY406_09495 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D FY406_06240 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:srat00194]
D FY406_00110 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D FY406_00115 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D FY406_00120 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D FY406_00125 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D FY406_00130 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D FY406_00135 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D FY406_00145 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D FY406_00140 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:srat03000]
D FY406_01265 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D FY406_00330 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D FY406_10255 DeoR/GlpR transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D FY406_01150 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D FY406_08125 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D FY406_05105 DeoR/GlpR transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D FY406_05150 helix-turn-helix transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D FY406_00260 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FY406_01225 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FY406_06575 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FY406_04680 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D FY406_02105 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D FY406_08610 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D FY406_06705 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D FY406_01180 winged helix-turn-helix transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FY406_06800 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FY406_09015 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FY406_01290 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D FY406_00805 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D FY406_02385 Crp/Fnr family transcriptional regulator K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D FY406_03515 cyclic nucleotide-binding domain-containing protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D FY406_02530 winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D FY406_00790 winged helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D FY406_06005 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D FY406_06320 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D FY406_03700 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D FY406_00305 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D FY406_03175 helix-turn-helix transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D FY406_03940 helix-turn-helix transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D FY406_02090 Rgg/GadR/MutR family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D FY406_04320 helix-turn-helix domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D FY406_01345 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D FY406_02045 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D FY406_08660 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D FY406_04765 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D FY406_01390 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D FY406_03615 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D FY406_08595 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D FY406_01785 transcription antiterminator K03493 bglG1; transcriptional antiterminator
D FY406_05120 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator
D FY406_09385 HTH domain-containing protein K03483 mtlR; mannitol operon transcriptional activator
D FY406_01620 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator
D FY406_03640 transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D FY406_06530 BglG family transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D FY406_07360 transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D FY406_02800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FY406_10215 PRD domain-containing protein K02531 lacT; transcriptional antiterminator
D FY406_00835 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D FY406_02355 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D FY406_02395 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D FY406_03740 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D FY406_01960 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D FY406_06735 PspC domain-containing protein K03973 pspC; phage shock protein C
D FY406_08065 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D FY406_04455 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D FY406_04075 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:srat03021]
D FY406_03360 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D FY406_04110 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D FY406_04115 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D FY406_03800 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D FY406_05635 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D FY406_07770 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D FY406_05390 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D FY406_04670 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D FY406_04300 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D FY406_05895 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:srat03019]
D FY406_00040 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D FY406_01200 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D FY406_10000 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D FY406_05625 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D FY406_06490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D FY406_01350 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D FY406_00715 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D FY406_05530 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D FY406_07440 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D FY406_03555 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D FY406_09415 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D FY406_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D FY406_04270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D FY406_07125 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:srat03011]
D FY406_09475 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D FY406_01970 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D FY406_03255 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D FY406_02650 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D FY406_03315 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D FY406_04610 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D FY406_01325 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D FY406_03295 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D FY406_03625 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D FY406_03215 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D FY406_03355 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D FY406_01330 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D FY406_03350 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D FY406_03290 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D FY406_03530 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D FY406_08100 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D FY406_03270 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D FY406_04620 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D FY406_03245 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D FY406_09160 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D FY406_07750 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D FY406_06385 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D FY406_03240 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D FY406_03225 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D FY406_03230 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D FY406_03285 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D FY406_03305 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D FY406_02665 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D FY406_08465 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D FY406_06380 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D FY406_08470 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D FY406_03620 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D FY406_03275 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D FY406_03325 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D FY406_03260 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D FY406_03365 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D FY406_03310 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D FY406_07265 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D FY406_07490 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D FY406_07920 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D FY406_03250 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D FY406_03235 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D FY406_03280 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D FY406_07930 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D FY406_03830 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D FY406_03265 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D FY406_03320 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D FY406_07205 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D FY406_02435 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D FY406_02440 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D FY406_04290 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D FY406_06480 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D FY406_01485 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D FY406_07485 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D FY406_03345 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D FY406_04065 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_05745 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_04940 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_03390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_02905 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_05730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_04050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_03375 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_02890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_04925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_02900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_03385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_04060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_04935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_05740 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:srat03009]
D FY406_00040 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D FY406_06445 GTPase Era K03595 era; GTPase
D FY406_07690 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D FY406_05390 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D FY406_04670 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D FY406_04300 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D FY406_01405 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D FY406_05650 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D FY406_09150 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D FY406_05165 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D FY406_02150 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D FY406_04430 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D FY406_05510 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D FY406_06225 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D FY406_00840 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D FY406_03595 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D FY406_02790 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D FY406_07500 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D FY406_05190 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D FY406_07595 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D FY406_05970 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D FY406_04280 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D FY406_08055 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D FY406_08695 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D FY406_01170 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D FY406_08110 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D FY406_02155 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D FY406_02290 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D FY406_03575 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D FY406_00715 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D FY406_05530 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D FY406_01370 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D FY406_04470 ribosome biogenesis GTPase Der K03977 engA; GTPase
D FY406_08845 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D FY406_10145 hflX; GTPase HflX K03665 hflX; GTPase
D FY406_04810 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D FY406_08955 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D FY406_02125 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D FY406_05410 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D FY406_05385 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D FY406_02735 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D FY406_04830 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D FY406_06435 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D FY406_04815 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D FY406_05710 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D FY406_02830 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D FY406_04445 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:srat03016]
D FY406_10135 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D FY406_08175 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D FY406_04915 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D FY406_00940 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D FY406_04315 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D FY406_06300 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D FY406_02400 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D FY406_06830 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D FY406_02415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D FY406_04775 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D FY406_00585 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D FY406_07095 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D FY406_06600 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D FY406_04510 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D FY406_03570 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D FY406_05060 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D FY406_02420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D FY406_00015 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D FY406_04100 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D FY406_02750 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D FY406_02120 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D FY406_05350 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D FY406_05370 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D FY406_03760 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D FY406_09240 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D FY406_07855 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_08670 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_08955 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D FY406_10150 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D FY406_09670 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D FY406_02675 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D FY406_01500 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D FY406_05605 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D FY406_05480 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D FY406_05485 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D FY406_01530 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D FY406_06855 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D FY406_02880 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D FY406_01645 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D FY406_01945 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D FY406_08820 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D FY406_08115 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D FY406_10100 tRNA (adenine(22)-N(1))-methyltransferase TrmK K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D FY406_05990 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D FY406_05910 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D FY406_02685 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D FY406_00640 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D FY406_08255 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D FY406_08250 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D FY406_08245 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D FY406_08240 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D FY406_07005 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D FY406_01660 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D FY406_07860 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D FY406_02865 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D FY406_01175 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D FY406_01165 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D FY406_05330 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D FY406_04850 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D FY406_06490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D FY406_03555 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:srat03012]
D FY406_05405 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D FY406_07480 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D FY406_09950 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D FY406_01965 elongation factor Ts K02357 tsf; elongation factor Ts
D FY406_06905 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D FY406_01320 fusA; elongation factor G K02355 fusA; elongation factor G
D FY406_08965 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D FY406_06395 ribosome recycling factor K02838 frr; ribosome recycling factor
D FY406_08960 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D FY406_02835 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D FY406_03340 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D FY406_04660 efp; elongation factor P K02356 efp; elongation factor P
D FY406_07010 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D FY406_00735 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:srat03110]
D FY406_09920 AAA domain-containing protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D FY406_01955 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D FY406_00925 ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D FY406_08455 ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D FY406_08420 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D FY406_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D FY406_04270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D FY406_03755 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D FY406_01940 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D FY406_03745 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D FY406_04265 co-chaperone GroES K04078 groES; chaperonin GroES
D FY406_02795 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D FY406_02875 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D FY406_00140 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D FY406_06355 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D FY406_05680 Cof-type HAD-IIB family hydrolase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D FY406_00595 prsA; peptidylprolyl isomerase PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D FY406_04590 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:srat04131]
D FY406_01315 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D FY406_00775 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D FY406_09410 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:srat03032]
D FY406_00810 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D FY406_02805 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D FY406_02660 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D FY406_07765 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D FY406_04460 helicase loader K03346 dnaB; replication initiation and membrane attachment protein
D FY406_04465 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D FY406_04215 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_04615 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_09420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D FY406_03455 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D FY406_02810 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D FY406_00665 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D FY406_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D FY406_00315 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D FY406_08840 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D FY406_04570 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D FY406_01675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D FY406_00185 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D FY406_03125 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D FY406_09095 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D FY406_07290 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D FY406_09500 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D FY406_09510 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D FY406_08825 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:srat03036]
D FY406_00040 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D FY406_00810 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D FY406_02805 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D FY406_05275 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D FY406_00035 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D FY406_05960 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D FY406_05965 segregation/condensation protein B K06024 scpB; segregation and condensation protein B
D FY406_00975 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D FY406_02850 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D FY406_07015 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D FY406_06360 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D FY406_05515 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D FY406_00980 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D FY406_06900 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D FY406_07020 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D FY406_00970 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D FY406_07295 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D FY406_00945 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D FY406_00960 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D FY406_02995 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D FY406_03000 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D FY406_07275 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA
D FY406_02800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FY406_09500 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D FY406_09510 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D FY406_02675 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D FY406_04430 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D FY406_08820 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D FY406_04845 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D FY406_08425 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D FY406_07135 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:srat03400]
D FY406_06255 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D FY406_09530 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D FY406_02605 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D FY406_04600 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D FY406_06265 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D FY406_00930 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D FY406_07735 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D FY406_10050 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D FY406_01555 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D FY406_00330 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D FY406_02330 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D FY406_06460 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D FY406_06285 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D FY406_10125 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D FY406_00185 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D FY406_01675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D FY406_04640 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D FY406_07715 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D FY406_09705 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D FY406_09335 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D FY406_04110 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D FY406_04115 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D FY406_03360 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D FY406_03800 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D FY406_05635 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D FY406_02840 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D FY406_02345 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D FY406_04585 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D FY406_02340 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D FY406_00855 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D FY406_00850 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D FY406_09420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D FY406_03455 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D FY406_02810 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D FY406_00665 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D FY406_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D FY406_00315 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D FY406_04215 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_04615 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_03125 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D FY406_04560 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D FY406_02320 recA; recombinase RecA K03553 recA; recombination protein RecA
D FY406_02335 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D FY406_03180 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D FY406_05640 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D FY406_01545 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D FY406_02740 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D FY406_04730 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D FY406_03020 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D FY406_00765 recR; recombination protein RecR K06187 recR; recombination protein RecR
D FY406_00830 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D FY406_05590 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D FY406_10270 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D FY406_10275 rexB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D FY406_09845 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D FY406_10300 cas1e; type I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D FY406_09095 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D FY406_07290 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D FY406_08825 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D FY406_00810 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D FY406_01010 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D FY406_03705 helix-turn-helix domain-containing protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D FY406_04995 recX; recombination regulator RecX K03565 recX; regulatory protein
D FY406_07085 bifunctional DnaQ family exonuclease/ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D FY406_00455 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D FY406_00460 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D FY406_07215 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:srat03029]
D FY406_05405 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D FY406_07480 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D FY406_01965 elongation factor Ts K02357 tsf; elongation factor Ts
D FY406_06905 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D FY406_01320 fusA; elongation factor G K02355 fusA; elongation factor G
D FY406_06445 GTPase Era K03595 era; GTPase
D FY406_04100 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D FY406_04315 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D FY406_02415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D FY406_04775 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D FY406_02400 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D FY406_04785 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D FY406_04790 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D FY406_04780 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D FY406_04215 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_04615 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D FY406_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D FY406_03745 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D FY406_04270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D FY406_04265 co-chaperone GroES K04078 groES; chaperonin GroES
D FY406_03755 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D FY406_07855 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_08670 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_01495 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_05900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:srat02000]
D FY406_05200 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_05205 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08935 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08190 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08265 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08270 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08930 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_08195 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D FY406_01795 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D FY406_04535 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D FY406_08180 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D FY406_00565 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D FY406_00555 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D FY406_00560 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D FY406_08590 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D FY406_08585 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D FY406_08580 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D FY406_08575 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D FY406_08625 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D FY406_08620 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D FY406_02595 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D FY406_09005 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D FY406_02590 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D FY406_02600 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D FY406_02585 betaine/proline/choline family ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D FY406_09010 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D FY406_00280 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D FY406_01235 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D FY406_00265 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D FY406_00270 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D FY406_00275 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D FY406_01255 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D FY406_01250 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D FY406_01245 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D FY406_04220 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D FY406_09130 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D FY406_09120 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D FY406_09115 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D FY406_09125 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D FY406_04235 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D FY406_09210 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D FY406_09205 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D FY406_09200 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D FY406_09190 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D FY406_09195 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D FY406_07710 ABC transporter permease subunit K10036 glnH; glutamine transport system substrate-binding protein
D FY406_07705 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_00075 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D FY406_00080 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D FY406_00085 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D FY406_00070 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_05540 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_09540 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_04370 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_09535 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D FY406_05545 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D FY406_05550 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_08345 transporter substrate-binding domain-containing protein K16956 tcyJ; L-cystine transport system substrate-binding protein
D FY406_08325 amino acid ABC transporter substrate-binding protein K16957 tcyK; L-cystine transport system substrate-binding protein
D FY406_08330 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D FY406_08335 amino acid ABC transporter permease K16959 tcyM; L-cystine transport system permease protein
D FY406_08340 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_07740 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D FY406_07745 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D FY406_00910 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D FY406_00905 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D FY406_06170 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D FY406_06175 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D FY406_06180 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D FY406_06185 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D FY406_06190 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D FY406_04375 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D FY406_04390 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D FY406_04385 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D FY406_10015 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D FY406_10010 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D FY406_10005 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D FY406_03895 ABC transporter substrate-binding protein/permease K17073 lysX1; putative lysine transport system substrate-binding protein
D FY406_03890 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D FY406_09355 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D FY406_09365 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D FY406_09360 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D FY406_04020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D FY406_04025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D FY406_04030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D FY406_04035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D FY406_04040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D FY406_06115 ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D FY406_06110 iron ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D FY406_06105 iron ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D FY406_06120 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D FY406_06050 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D FY406_07185 zinc ABC transporter substrate-binding protein AdcA K09815 znuA; zinc transport system substrate-binding protein
D FY406_04095 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D FY406_04090 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D FY406_04755 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D FY406_06885 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component
D FY406_02700 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D FY406_04415 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D FY406_02710 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D FY406_02705 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D FY406_04410 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D FY406_05460 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D FY406_05455 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D FY406_09255 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D FY406_09260 ABC transporter permease K20460 nukE; lantibiotic transport system permease protein
D FY406_09265 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D FY406_00545 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D FY406_00540 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D FY406_00550 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D FY406_08805 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D FY406_08810 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D FY406_08235 ABC transporter permease subunit K25147 berB; beta-exotoxin I transport system permease protein
D FY406_08230 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D FY406_08095 FtsX-like permease family protein K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D FY406_08090 ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D FY406_07020 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D FY406_07015 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D FY406_05360 multidrug ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D FY406_05355 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D FY406_00210 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_00520 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_02065 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_02215 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_03875 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_03905 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_07070 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_07795 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_08705 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D FY406_00215 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_00525 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_02060 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_02080 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_02210 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_03880 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_03900 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_04330 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_07075 AAA family ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_07800 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_08710 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_09435 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D FY406_08995 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D FY406_09300 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D FY406_09865 ABC transporter ATP-binding protein/permease K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D FY406_10340 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D FY406_09000 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D FY406_09305 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D FY406_10345 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D FY406_03965 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D FY406_03210 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D FY406_06475 multidrug efflux MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D FY406_06645 multidrug efflux MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D FY406_00415 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D FY406_00420 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D FY406_02135 PTS glucose/maltose transporter subunit IIBCA K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D FY406_04690 PTS beta-glucoside transporter subunit IIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D FY406_01155 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D FY406_03670 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D FY406_08600 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D FY406_02100 treB; PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D FY406_01725 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_03645 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_07365 PTS mannose transporter subunit IIAB K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_09755 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D FY406_01720 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_03655 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_07375 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_08135 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_09760 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D FY406_01730 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_03650 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_07370 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D FY406_09380 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D FY406_09390 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D FY406_10210 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D FY406_10205 PTS lactose transporter subunit IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D FY406_06535 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D FY406_06525 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D FY406_06545 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D FY406_01600 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D FY406_01605 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D FY406_01610 srlA; PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D FY406_01880 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D FY406_01875 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D FY406_01870 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D FY406_10230 PTS sugar transporter subunit IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D FY406_10225 PTS fructose transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D FY406_10220 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component
D FY406_04550 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D FY406_04250 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D FY406_04545 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D FY406_04540 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D FY406_04240 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D FY406_01845 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D FY406_01850 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D FY406_05125 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D FY406_01855 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D FY406_05130 PTS sugar transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D FY406_01735 hypothetical protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D FY406_00350 aquaporin K06188 aqpZ; aquaporin Z
D FY406_01035 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D FY406_06715 two pore domain potassium channel family protein K10716 kch; voltage-gated potassium channel
D FY406_06230 ammonium transporter K03320 amt; ammonium transporter, Amt family
D FY406_07755 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D FY406_03780 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D FY406_04635 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D FY406_06060 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D FY406_00870 murein hydrolase transporter LrgA K05338 lrgA; holin-like protein
D FY406_08005 BMC domain-containing protein K04027 eutM; ethanolamine utilization protein EutM
D FY406_08430 amino acid permease K16235 mmuP; S-methylmethionine transporter
D FY406_02365 arcD; arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D FY406_01920 APC family permease K20265 gadC; glutamate:GABA antiporter
D FY406_06020 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D FY406_02255 zupT; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D FY406_00780 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D FY406_08540 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D FY406_05980 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D FY406_05985 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D FY406_05325 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D FY406_06720 chloride transporter K03281 clcA; chloride channel protein, CIC family
D FY406_07260 voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D FY406_07255 voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family
D FY406_06785 divalent metal cation transporter K03322 mntH; manganese transport protein
D FY406_07160 AEC family transporter K24180 mleP; malate permease and related proteins
D FY406_08200 permease K24180 mleP; malate permease and related proteins
D FY406_01135 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D FY406_01130 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D FY406_06010 ECF transporter S component K23675 fmnP; riboflavin transporter
D FY406_06870 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D FY406_01520 hypothetical protein K16788 niaX; niacin transporter
D FY406_00635 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D FY406_06305 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D FY406_06900 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D FY406_08755 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D FY406_08730 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D FY406_08760 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D FY406_09320 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D FY406_01790 HlyD family efflux transporter periplasmic adaptor subunit K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D FY406_08085 HlyD family efflux transporter periplasmic adaptor subunit K24950 yknX; membrane fusion protein, antimicrobial resistance system
D FY406_08405 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D FY406_00900 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D FY406_00895 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:srat02044]
D FY406_00955 YggT family protein K02221 yggT; YggT family protein
D FY406_00680 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D FY406_04655 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D FY406_00675 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D FY406_05700 DEAD/DEAH box helicase K02240 comFA; competence protein ComFA
D FY406_05705 ComF family protein K02242 comFC; competence protein ComFC
D FY406_04140 type II/IV secretion system protein K02243 comGA; competence protein ComGA
D FY406_04145 type II secretion system F family protein K02244 comGB; competence protein ComGB
D FY406_04150 prepilin-type N-terminal cleavage/methylation domain-containing protein K02245 comGC; competence protein ComGC
D FY406_04155 type II secretion system protein K02246 comGD; competence protein ComGD
D FY406_04165 prepilin-type N-terminal cleavage/methylation domain-containing protein K02248 comGF; competence protein ComGF
D FY406_05270 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D FY406_04705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D FY406_07890 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D FY406_04295 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D FY406_06485 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D FY406_03330 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D FY406_07870 accessory Sec system protein translocase subunit SecY2 K03076 secY; preprotein translocase subunit SecY
D FY406_08635 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D FY406_06640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D FY406_04890 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D FY406_01495 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_05900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D FY406_07875 asp1; accessory Sec system protein Asp1 K12268 asp1; accessory secretory protein Asp1
D FY406_07880 asp2; accessory Sec system protein Asp2 K12269 asp2; accessory secretory protein Asp2
D FY406_07885 asp3; accessory Sec system protein Asp3 K12270 asp3; accessory secretory protein Asp3
C 02042 Bacterial toxins [BR:srat02042]
D FY406_02630 TDT family transporter K11041 eta; exfoliative toxin A/B
D FY406_06060 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D FY406_08380 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:srat02022]
D FY406_03635 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D FY406_00060 vicK; cell wall metabolism sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D FY406_00065 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D FY406_08795 HAMP domain-containing histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D FY406_08800 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D FY406_08305 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D FY406_09165 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D FY406_09170 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D FY406_04450 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D FY406_00530 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D FY406_00535 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D FY406_00205 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D FY406_00200 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D FY406_05670 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D FY406_05675 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D FY406_00860 sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D FY406_00865 response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D FY406_07965 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D FY406_07960 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:srat02035]
D FY406_05540 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_09540 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D FY406_04370 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:srat04812]
D FY406_00970 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D FY406_00975 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D FY406_02800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:srat04147]
D FY406_07440 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D FY406_01315 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D FY406_01300 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D FY406_09410 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D FY406_06355 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D FY406_04270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D FY406_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D FY406_01630 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D FY406_02745 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D FY406_06905 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D FY406_05350 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D FY406_03335 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D FY406_10115 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D FY406_01505 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D FY406_01510 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D FY406_01220 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D FY406_00170 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D FY406_04490 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D FY406_01285 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D FY406_06250 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D FY406_03060 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D FY406_03490 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_09915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D FY406_06910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D FY406_00775 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:srat02048]
D FY406_09845 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D FY406_10300 cas1e; type I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D FY406_09840 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D FY406_10295 cas2e; type I-E CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D FY406_10330 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D FY406_10325 type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA
D FY406_10320 casB; type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D FY406_10315 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D FY406_10310 cas5e; type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D FY406_10305 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D FY406_09850 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D FY406_09835 csn2; type II-A CRISPR-associated protein Csn2 K19137 csn2; CRISPR-associated protein Csn2
D FY406_09730 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D FY406_03125 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D FY406_04175 class I SAM-dependent methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D FY406_07400 restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5]
D FY406_02455 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D FY406_07385 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D FY406_02460 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE
D FY406_03105 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D FY406_05080 plasmid addiction system poison protein K06218 relE; mRNA interferase RelE/StbE
D FY406_10285 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D FY406_10280 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D FY406_04865 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D FY406_04860 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D FY406_06735 PspC domain-containing protein K03973 pspC; phage shock protein C
D FY406_00970 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D FY406_09500 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D FY406_09510 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D FY406_07855 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D FY406_08670 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:srat01504]
D FY406_00720 YSIRK-type signal peptide-containing protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_03725 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D FY406_07565 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW
D FY406_07625 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D FY406_07630 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D FY406_07635 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D FY406_07640 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:srat03100]
D FY406_02895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_04055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_04930 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_05735 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_03380 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D FY406_05785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_07270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_09460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_02775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_02945 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D FY406_04070 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D FY406_02765 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D FY406_05755 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D FY406_02915 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D FY406_04950 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D FY406_01975 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D FY406_09480 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D FY406_03445 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D FY406_02770 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D FY406_04975 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D FY406_03410 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D FY406_02935 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D FY406_02980 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D FY406_05775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D FY406_03400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D FY406_03440 tRNA-His K14226 tRNA-His; tRNA His
D FY406_02985 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D FY406_04970 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D FY406_03405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D FY406_02925 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_03450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_04960 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_05780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_01375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_02940 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_03815 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_05765 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D FY406_05760 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D FY406_02180 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D FY406_02920 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D FY406_04955 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D FY406_03420 tRNA-Met K14230 tRNA-Met; tRNA Met
D FY406_02955 tRNA-Met K14230 tRNA-Met; tRNA Met
D FY406_02970 tRNA-Met K14230 tRNA-Met; tRNA Met
D FY406_02960 tRNA-Ile K14230 tRNA-Met; tRNA Met
D FY406_02975 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D FY406_03425 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D FY406_05790 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D FY406_02950 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D FY406_01380 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_05375 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_02990 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_02965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_03415 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D FY406_05770 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_05020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_03825 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_04965 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_02930 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D FY406_03435 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D FY406_09485 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D FY406_03430 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D FY406_04945 tRNA-Val K14237 tRNA-Val; tRNA Val
D FY406_03395 tRNA-Val K14237 tRNA-Val; tRNA Val
D FY406_05750 tRNA-Val K14237 tRNA-Val; tRNA Val
D FY406_02910 tRNA-Val K14237 tRNA-Val; tRNA Val
D FY406_05730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_04050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_03375 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_02890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_04925 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D FY406_02900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_03385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_04060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_04935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_05740 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D FY406_04065 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_05745 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_04940 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_03390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_02905 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D FY406_01640 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D FY406_05605 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D FY406_09450 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D FY406_06975 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D FY406_09910 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D FY406_09905 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D FY406_00240 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D FY406_05215 dihydrodipicolinate reductase K25950 amdH; secondary-alkyl amine dehydrogenase [NAD(P)+] [EC:1.4.1.28]
D FY406_07190 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D FY406_06675 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D FY406_06370 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D FY406_06415 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D FY406_06825 msrA; peptide-methionine (S)-S-oxide reductase MsrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D FY406_06820 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D FY406_07225 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D FY406_06315 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D FY406_08355 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D FY406_08360 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D FY406_08275 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D FY406_06365 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D FY406_06410 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D FY406_08120 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D FY406_02265 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D FY406_06065 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D FY406_05610 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D FY406_01925 putrescine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D FY406_00020 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D FY406_09800 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D FY406_08835 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D FY406_08185 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D FY406_06745 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D FY406_08980 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D FY406_06965 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D FY406_09765 pfkB; 1-phosphofructokinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D FY406_03840 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D FY406_05155 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D FY406_09935 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D FY406_06740 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D FY406_01125 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D FY406_09990 esterase family protein K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D FY406_07665 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D FY406_02555 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D FY406_04805 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D FY406_07560 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D FY406_02670 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D FY406_01425 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D FY406_01420 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D FY406_01230 alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D FY406_03660 mngB; mannosylglycerate hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D FY406_06865 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D FY406_03510 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D FY406_04875 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D FY406_07105 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D FY406_05100 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D FY406_00880 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D FY406_06985 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D FY406_00785 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D FY406_06200 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D FY406_07465 ferredoxin K05337 fer; ferredoxin
D FY406_03980 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D FY406_09340 FAD-containing oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D FY406_08165 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D FY406_00825 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D FY406_05005 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D FY406_06805 ribonucleotide reductase K03647 nrdI; protein involved in ribonucleotide reduction
D FY406_00090 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D FY406_08025 eutH; ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D FY406_07985 eutL; ethanolamine utilization microcompartment protein EutL K04026 eutL; ethanolamine utilization protein EutL
D FY406_07940 eutP; EutP/PduV family microcompartment system protein K04029 eutP; ethanolamine utilization protein EutP
D FY406_08030 cupin domain-containing protein K04030 eutQ; ethanolamine utilization protein EutQ
D FY406_07935 BMC domain-containing protein K04031 eutS; ethanolamine utilization protein EutS
D FY406_07955 BMC domain-containing protein K04031 eutS; ethanolamine utilization protein EutS
D FY406_09085 VOC family protein K08234 yaeR; glyoxylase I family protein
D FY406_00965 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D FY406_09055 AarF/ABC1/UbiB kinase family protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D FY406_02315 transcriptional regulator Spx K16509 spxA; regulatory protein spx
D FY406_09230 Spx/MgsR family RNA polymerase-binding regulatory protein K16509 spxA; regulatory protein spx
D FY406_06725 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D FY406_05685 S1 RNA-binding domain-containing protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D FY406_03790 trigger factor K03545 tig; trigger factor
D FY406_06495 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D FY406_00450 redoxin NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D FY406_03955 mecA; adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D FY406_08650 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D FY406_01355 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D FY406_08830 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D FY406_10105 DnaD domain-containing protein K02086 dnaD; DNA replication protein
D FY406_02170 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D FY406_02580 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D FY406_02140 ISL3 family transposase K07485 K07485; transposase
D FY406_04360 ISL3 family transposase K07485 K07485; transposase
D FY406_04920 ISL3 family transposase K07485 K07485; transposase
D FY406_00995 IS110 family transposase K07486 K07486; transposase
D FY406_01890 IS110 family transposase K07486 K07486; transposase
D FY406_05305 IS110 family transposase K07486 K07486; transposase
D FY406_06310 IS110 family transposase K07486 K07486; transposase
D FY406_07280 IS110 family transposase K07486 K07486; transposase
D FY406_07550 IS110 family transposase K07486 K07486; transposase
D FY406_09855 IS110 family transposase K07486 K07486; transposase
D FY406_03470 IS3 family transposase K07497 K07497; putative transposase
D FY406_04420 IS3 family transposase K07497 K07497; putative transposase
D FY406_05725 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D FY406_01100 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D FY406_10025 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D FY406_02885 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D FY406_04000 citrate:proton symporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D FY406_08770 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D FY406_09345 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D FY406_05615 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D FY406_01490 protein jag K06346 jag; spoIIIJ-associated protein
D FY406_03085 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI
D FY406_03080 pxpB; 5-oxoprolinase subunit PxpB K06351 kipI; inhibitor of KinA
C 99993 Cell motility
C 99995 Signaling proteins
D FY406_05295 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D FY406_03710 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D FY406_06425 phoH; phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D FY406_06875 N-acetylmuramoyl-L-alanine amidase K07273 acm; lysozyme
C 99994 Others
D FY406_09185 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D FY406_03630 SdpI family protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D FY406_07220 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D FY406_00615 competence protein CoiA K06198 coiA; competence protein CoiA
D FY406_04210 DUF4479 domain-containing protein K06878 K06878; tRNA-binding protein
D FY406_06840 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D FY406_01045 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D FY406_03985 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D FY406_07240 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D FY406_03970 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D FY406_00220 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D FY406_06275 VOC family protein K04750 phnB; PhnB protein
D FY406_04435 LemA family protein K03744 lemA; LemA protein
D FY406_06730 SprT family protein K03095 sprL; SprT-like protein
D FY406_02640 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D FY406_06860 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D FY406_06650 TIGR03943 family protein K08986 ycgQ; putative membrane protein
D FY406_08310 DUF1304 family protein K08987 K08987; putative membrane protein
D FY406_09370 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D FY406_06930 HD domain-containing protein K06885 K06885; uncharacterized protein
D FY406_00645 prolyl oligopeptidase family serine peptidase K06889 K06889; uncharacterized protein
D FY406_08495 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D FY406_05920 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D FY406_01665 CoA-binding protein K06929 K06929; uncharacterized protein
D FY406_09745 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D FY406_05050 HD domain-containing protein K06950 K06950; uncharacterized protein
D FY406_05915 HD domain-containing protein K06950 K06950; uncharacterized protein
D FY406_01750 cation:dicarboxylase symporter family transporter K06956 K06956; uncharacterized protein
D FY406_08105 KH domain-containing protein K06960 K06960; uncharacterized protein
D FY406_08475 amidohydrolase K07045 K07045; uncharacterized protein
D FY406_10335 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D FY406_01935 nitroreductase family protein K07078 K07078; uncharacterized protein
D FY406_02535 permease K07089 K07089; uncharacterized protein
D FY406_06655 permease K07089 K07089; uncharacterized protein
D FY406_05945 metallophosphoesterase K07095 K07095; uncharacterized protein
D FY406_01525 transcription repressor NadR K07105 K07105; uncharacterized protein
D FY406_08785 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D FY406_02515 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D FY406_10130 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D FY406_06025 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D FY406_00580 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D FY406_05975 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D FY406_09275 DUF438 domain-containing protein K09155 K09155; uncharacterized protein
D FY406_03715 PFL family protein K09157 K09157; uncharacterized protein
D FY406_08630 putative DNA-binding protein K09787 K09787; uncharacterized protein
D FY406_06400 S1 RNA-binding domain-containing protein K00243 K00243; uncharacterized protein
D FY406_02260 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D FY406_01895 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D FY406_05930 YneF family protein K09976 K09976; uncharacterized protein
D FY406_07925 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D FY406_04990 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein
D FY406_05395 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024