+C Peptidases and inhibitors KO
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Peptidases and Inhibitors - Serratia plymuthica 4Rx13
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AAspartic peptidases
B Family A1: pepsin family
B Family A2: retropepsin family
B Family A5: thermopsin family
B Family A8: signal peptidase II family
C SOD_c05710 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
B Family A22: presenilin family
B Family A24: type IV prepilin peptidase family
B Family A25: gpr protease family
B Family A26: omptin family
B Family A28
B Family A31: HybD endopeptidase family
C SOD_c40280 hycI; hydrogenase 3 maturation protease HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
B Family A36
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ACysteine peptidases
B Family C1: papain family
B Family C2: calpain family
B Family C3: picornain family
B Family C4: NIa protease family
B Family C5
B Family C9
B Family C10: streptopain family
B Family C11: clostripain family
B Family C12: ubiquitin C-terminal hydrolase family
B Family C13: legumain family
B Family C14: caspase family
B Family C15: pyroglutamyl peptidase I family
C SOD_c11300 pcp1; pyrrolidone-carboxylate peptidase Pcp K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
C SOD_c28180 pcp2; pyrrolidone-carboxylate peptidase 2 K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
B Family C16
B Family C19: ubiquitin-specific protease family
B Family C25: gingipain family
B Family C26: gamma-glutamyl hydrolase family
C SOD_c41210 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
C SOD_c24290 yfeJ; glutamine amidotransferase-like protein YfeJ K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
C SOD_c35290 guaA; GMp synthase [glutamine-hydrolyzing] GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
C SOD_c18790 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
B Family C27
B Family C30
B Family C37
B Family C39
C SOD_c21480 cvaB; colicin V secretion/processing ATP-binding protein CvaB K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
C SOD_c38330 mchF; putative microcin-H47 secretion/processing ATP-binding protein MchF K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
C SOD_c31020 mchF2; putative microcin-H47 secretion/processing ATP-binding protein MchF K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
B Family C40
C SOD_c31570 spr; putative endopeptidase Spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
C SOD_c20130 ydhO; putative endopeptidase YdhO K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
C SOD_c19750 nlpC; putative endopeptidase NlpC K13695 nlpC; probable lipoprotein NlpC
B Family C44
C SOD_c32440 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C SOD_c41520 gltB; glutamate synthase [NADpH] large chain GltB K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
C SOD_c47230 glmS; glutamine--fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C SOD_c10930 asnB; asparagine synthetase AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
B Family C45
B Family C46: hedgehog family
B Family C47: staphopain family
B Family C48: Ulp1 endopeptidase family
B Family C50: separase family
B Family C54: Aut2 peptidase family
B Family C55: YopJ protease family
B Family C56: PfpI endopeptidase family
C SOD_c23190 pfpI; intracellular protease 1 K05520 yhbO; deglycase [EC:3.5.1.124]
C SOD_c09210 yajL; chaperone protein YajL K03152 thiJ; protein deglycase [EC:3.5.1.124]
C SOD_c12300 inhA; isonitrile hydratase InhA K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
B Family C57: vaccinia virus I7 peptidase family
B Family C58
B Family C59
B Family C60
B Family C63
B Family C64
B Family C65
B Family C67
B Family C69
B Family C70
B Family C75
B Family C76
B Family C78
B Family C79
B Family C82
C SOD_c04680 ybiS; putative L,D-transpeptidase YbiS K19235 ybiS; L,D-transpeptidase YbiS
C SOD_c19990 ycfS; putative L,D-transpeptidase YcfS K19236 ycfS; L,D-transpeptidase YcfS
C SOD_c15910 ycbB; putative L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
B Family C83
B Family C85
B Family C86
B Family C88
B Family C89
B Family C97
B Family C98
B Family C110
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AGlutamic peptidases
B Family G1
B Family G4
B Family G5: prenyl protease 2 family
C SOD_c11680 putative abortive infection protein K07052 K07052; CAAX protease family protein
C SOD_c31030 hypothetical protein K07052 K07052; CAAX protease family protein
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AMetallo peptidases
B Family M1
C SOD_c15990 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
B Family M2
B Family M3
C SOD_c45000 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
C SOD_c21360 dcp; peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
B Family M4: thermolysin family
B Family M5: mycolysin family
B Family M6: immune inhibitor A family
B Family M7: snapalysin family
B Family M8: leishmanolysin family
B Family M9
B Family M10
C SOD_c01670 serralysin K01406 prtC; serralysin [EC:3.4.24.40]
C SOD_c22200 serralysin K01406 prtC; serralysin [EC:3.4.24.40]
B Family M12: astacin/adamalysin family
B Family M13: neprilysin family
B Family M14: carboxypeptidase A family
B Family M15: zinc D-Ala-D-Ala carboxypeptidase family
C SOD_c21700 ddpX; D-alanyl-D-alanine dipeptidase DdpX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
C SOD_c33920 putative phagelysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
B Family M16: pitrilysin family
C SOD_c37810 ptrA; protease 3 K01407 ptrA; protease III [EC:3.4.24.55]
C SOD_c01100 yhjJ; protein YhjJ K07263 pqqL; zinc protease [EC:3.4.24.-]
B Family M17: leucyl aminopeptidase family
C SOD_c04380 pepA; putative cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
C SOD_c35520 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
B Family M18
B Family M19: membrane dipeptidase family
C SOD_c22520 hypothetical protein in pqqA 5'region K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
B Family M20
C SOD_c34170 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C SOD_c32730 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
C SOD_c18410 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
C SOD_c08170 pepD; cytosol non-specific dipeptidase PepD K01270 pepD; dipeptidase D [EC:3.4.13.-]
C SOD_c31190 hipO; hippurate hydrolase HipO K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
C SOD_c02710 amhX; amidohydrolase AmhX K14665 amhX; amidohydrolase [EC:3.5.1.-]
C SOD_c07910 hyuC; hydantoin utilization protein C K02083 allC; allantoate deiminase [EC:3.5.3.9]
B Family M23
C SOD_c26140 yebA; putative metalloprotease YebA K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
B Family M24
C SOD_c12490 map1; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
C SOD_c37560 map; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
C SOD_c02140 pepQ; Xaa-pro dipeptidase PepQ K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
C SOD_c23910 putative peptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
C SOD_c38790 pepP; Xaa-pro aminopeptidase PepP K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
B Family M26
B Family M27
B Family M28: aminopeptidase Y family
C SOD_c06820 iap; alkaline phosphatase isozyme conversion protein Iap K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
B Family M29: aminopeptidase T family
B Family M32: carboxypeptidase Taq family
C SOD_c24460 thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
B Family M34: anthrax lethal factor family
B Family M35: deuterolysin family
B Family M36: fungalysin family
B Family M38: beta-aspartyl dipeptidase family
B Family M41: FtsH endopeptidase family
C SOD_c03570 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
B Family M42: glutamyl aminopeptidase family
B Family M43: cytophagalysin family
B Family M44
B Family M48: Ste24 endopeptidase family
C SOD_c19340 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
C SOD_c39110 yggG; putative metalloprotease YggG K07387 K07387; metalloprotease [EC:3.4.24.-]
C SOD_c34460 TpR repeat-containing protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
B Family M49: dipeptidyl-peptidase III family
B Family M50: S2P protease family
C SOD_c37480 rseP; protease rsep K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
B Family M54
B Family M55: DppA aminopeptidase family
B Family M56
B Family M67
B Family M72
B Family M73
B Family M74
C SOD_c32870 mepA; penicillin-insensitive murein endopeptidase MepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
B Family M80
B Family M82
B Family M85
B Family M88
B Family M90
C SOD_c29170 mtfA; protein MtfA K09933 mtfA; MtfA peptidase
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AAsparagine peptide lyases
B Family N1
B Family N8
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AMixed peptidases
B Family P1: DmpA aminopeptidase family
C SOD_c04750 peptidase S58 DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
B Family P2
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ASerine peptidases
B Family S1: chymotrypsin family
C SOD_c24480 ydgD; putative serine protease YdgD K04775 ydgD; protease YdgD [EC:3.4.21.-]
C SOD_c06550 degP; periplasmic serine endoprotease degp K04771 degP; serine protease Do [EC:3.4.21.107]
C SOD_c41600 degQ; periplasmic pH-dependent serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-]
C SOD_c41610 degS; serine endoprotease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
B Family S3: togavirin family
B Family S6
B Family S7: flavivirin family
B Family S8: subtilisin family
B Family S9: prolyl oligopeptidase family
C SOD_c20520 putative peptidase y4nA K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
C SOD_c17690 ptrB; protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
B Family S10
B Family S11: D-Ala-D-Ala carboxypeptidase A family
C SOD_c10640 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C SOD_c14990 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C SOD_c24910 dacD; D-alanyl-D-alanine carboxypeptidase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C SOD_c12330 pbpG1; D-alanyl-D-alanine endopeptidase PbpG K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
C SOD_c24250 pbpG; D-alanyl-D-alanine endopeptidase PbpG K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
B Family S12: D-Ala-D-Ala carboxypeptidase B family
C SOD_c05040 ampH; D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
B Family S13: D-Ala-D-Ala peptidase C family
C SOD_c03530 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
B Family S14: ClpP endopeptidase family
C SOD_c09340 clpP; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
C SOD_c18130 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
C SOD_c36080 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
B Family S15
B Family S16: lon protease family
C SOD_c09360 lon; Lon protease Lon K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C SOD_c16160 ycbZ; Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
B Family S21: assemblin family
B Family S24: LexA family
C SOD_c42690 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
C SOD_c28280 umuD; protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
C SOD_p00470 umuD; error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
B Family S26: signal peptidase I family
C SOD_c36420 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
B Family S28
B Family S31
B Family S32
B Family S33
C SOD_c17730 pip; proline iminopeptidase Pip K01259 pip; proline iminopeptidase [EC:3.4.11.5]
B Family S41: C-terminal processing peptidase family
C SOD_c19320 prc; tail-specific protease Prc K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
B Family S45
B Family S49: protease IV family
C SOD_c25630 sppA; protease 4 K04773 sppA; protease IV [EC:3.4.21.-]
C SOD_c25100 sohB; putative protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
B Family S50
B Family S51
C SOD_c02080 pepE; peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
B Family S53
B Family S54: Rhomboid family
C SOD_c44380 glpG; rhomboid protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
B Family S55: SpoIVB peptidase family
B Family S62
B Family S66
B Family S77: phage prohead processing peptidase family
B Family S78
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AThreonine peptidases
B Family T1: proteasome family
C SOD_c46030 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
B Family T2
C SOD_c14200 iaaA; isoaspartyl peptidase IaaA K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
B Family T3: gamma-glutamyltransferase family
C SOD_c09020 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C SOD_c07840 ywrD; gamma-glutamyltransferase YwrD K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
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APeptidases of unknown catalytic type
B Family U32
C SOD_c34830 yegQ; putative protease YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C SOD_c03830 yhbV; YhbV K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
C SOD_c03840 yhbU; putative protease YhbU K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
B Family U62
C SOD_c41960 pmbA; protein PmbA K03592 pmbA; PmbA protein
C SOD_c42070 tldD; protein TldD K03568 tldD; TldD protein
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APeptidase inhibitors
B Family I1: Kazal family
B Family I2: Kunitz - BPTI family
B Family I4: serpin family
B Family I11: ecotin family
C SOD_c15080 eco; ecotin K08276 eco; ecotin
B Family I17: WAP-type family
B Family I25: cystatin family
B Family I27: calpastatin family
B Family I32: IAP family
B Family I34: IA3 family
B Family I35: timp family
B Family I39: alpha2M family
C SOD_c35500 yfhM; putative lipoprotein YfhM K06894 yfhM; alpha-2-macroglobulin
B Family I47: latexin family
B Family I49: proSAAS family
B Family I51: IC family
B Family I57: staphostatin B family
B Family I63
B Family I80
B Family I87
C SOD_c03070 hflC; protein HflC K04087 hflC; modulator of FtsH protease HflC
C SOD_c03060 hflK; modulator of FtsH protease HflK K04088 hflK; modulator of FtsH protease HflK
B Family I93
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: December 13, 2023
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Classification taken and modified from MEROPS