+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Serratia sp. AS12

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D SerAS12_0510 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D SerAS12_3431 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D SerAS12_2820 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E SerAS12_3861 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D SerAS12_2737 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D SerAS12_0252 histone family protein DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D SerAS12_1011 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D SerAS12_2090 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D SerAS12_1681 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D SerAS12_4067 Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D SerAS12_4068 chaperone-modulator protein CbpM K18997 cbpM; chaperone modulatory protein CbpM D SerAS12_0537 transcriptional regulator, AraC family K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SerAS12_1879 transcriptional regulator, AraC family K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SerAS12_1494 transcriptional regulator, AraC family K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SerAS12_0619 transcriptional regulator, AraC family K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SerAS12_3221 helix-turn-helix domain-containing protein AraC type K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SerAS12_4225 transcriptional regulator, AraC family K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SerAS12_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D SerAS12_4444 DnaA initiator-associating protein diaA K12961 diaA; DnaA initiator-associating protein D SerAS12_1735 Heat shock protein hspQ K11940 hspQ; heat shock protein HspQ D SerAS12_1466 DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D SerAS12_4529 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D SerAS12_0370 RNA chaperone Hfq K03666 hfq; host factor-I protein D SerAS12_4132 transcriptional regulator, ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D SerAS12_1663 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SerAS12_1447 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SerAS12_3237 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SerAS12_3793 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SerAS12_2375 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SerAS12_1635 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SerAS12_3396 Nucleoid-associated protein ndpA K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D SerAS12_1696 Chromosome partition protein mukB K03632 mukB; chromosome partition protein MukB D SerAS12_1695 Chromosome partition protein mukE K03804 mukE; chromosome partition protein MukE D SerAS12_1694 Chromosome partition protein mukF K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D SerAS12_0699 cell division protein FtsA K03590 ftsA; cell division protein FtsA D SerAS12_0749 Cell division protein ftsB-like protein K05589 ftsB; cell division protein FtsB D SerAS12_0177 Type II (General) Secretory Pathway (IISP) Family protein K09812 ftsE; cell division transport system ATP-binding protein D SerAS12_0689 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SerAS12_2317 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SerAS12_1664 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D SerAS12_0688 cell division protein FtsL K03586 ftsL; cell division protein FtsL D SerAS12_4888 cell division protein FtsN K03591 ftsN; cell division protein FtsN D SerAS12_0698 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D SerAS12_0694 cell division protein FtsW K03588 ftsW; cell division protein FtsW D SerAS12_0178 protein insertion ABC transporter, inner membrane subunit FtsX K09811 ftsX; cell division transport system permease protein D SerAS12_0700 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SerAS12_3637 Cell division protein zipA-like protein K03528 zipA; cell division protein ZipA D SerAS12_4893 Cell division protein zapB K09892 zapB; cell division protein ZapB D SerAS12_1713 protein of unknown function DUF1379 K18657 zapC; cell division protein ZapC D SerAS12_0707 UPF0289 protein yacF K18778 zapD; cell division protein ZapD D SerAS12_4456 AFG1-family ATPase K06916 zapE; cell division protein ZapE D SerAS12_0390 Opacity-associated protein A K07269 ytfB; cell division protein YtfB D SerAS12_0367 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SerAS12_3658 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SerAS12_4001 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SerAS12_2459 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D SerAS12_1055 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D SerAS12_2849 septum site-determining protein minC K03610 minC; septum site-determining protein MinC D SerAS12_2850 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D SerAS12_2851 Cell division topological specificity factor K03608 minE; cell division topological specificity factor D SerAS12_1727 Cell division inhibitor sulA K13053 sulA; cell division inhibitor SulA D SerAS12_4943 HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D SerAS12_1213 SeqA family protein K03645 seqA; negative modulator of initiation of replication D SerAS12_4516 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D SerAS12_4515 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D SerAS12_4514 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D SerAS12_1172 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D SerAS12_1351 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D SerAS12_4375 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D SerAS12_4379 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SerAS12_4995 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D SerAS12_4996 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SerAS12_0145 Tyrosine recombinase xerC K03733 xerC; integrase/recombinase XerC D SerAS12_4101 Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD D SerAS12_1543 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D SerAS12_0029 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D SerAS12_4973 GTP-binding protein engB K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 10, 2024