+F Repair protein KO
#
DNA Repair and Recombination Proteins - Talaromyces marneffei
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D EYB26_009389 uncharacterized protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E EYB26_001318 uncharacterized protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E EYB26_002519 uncharacterized protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E EYB26_008459 uncharacterized protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E EYB26_000155 uncharacterized protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E EYB26_005900 uncharacterized protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E EYB26_008906 uncharacterized protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F EYB26_002318 uncharacterized protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F EYB26_007102 uncharacterized protein K02328 POLD2; DNA polymerase delta subunit 2
F EYB26_002046 uncharacterized protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F EYB26_003330 uncharacterized protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F EYB26_001313 uncharacterized protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
E EYB26_008291 uncharacterized protein K04802 PCNA; proliferating cell nuclear antigen
E EYB26_009022 uncharacterized protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E EYB26_005781 uncharacterized protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E EYB26_003554 uncharacterized protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E EYB26_002272 uncharacterized protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E EYB26_004521 uncharacterized protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F EYB26_002601 uncharacterized protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F EYB26_003690 uncharacterized protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F EYB26_004551 uncharacterized protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F EYB26_004703 uncharacterized protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F EYB26_001826 uncharacterized protein K10609 CUL4; cullin 4
F EYB26_008424 uncharacterized protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F EYB26_005594 uncharacterized protein K15082 RAD7; DNA repair protein RAD7
F EYB26_005595 uncharacterized protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F EYB26_006074 uncharacterized protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F EYB26_009534 uncharacterized protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F EYB26_006261 uncharacterized protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F EYB26_009852 uncharacterized protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F EYB26_006125 uncharacterized protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F EYB26_008319 uncharacterized protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F EYB26_009446 uncharacterized protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F EYB26_001788 uncharacterized protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F EYB26_005739 uncharacterized protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F EYB26_009607 uncharacterized protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F EYB26_005592 uncharacterized protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F EYB26_005417 uncharacterized protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F EYB26_004703 uncharacterized protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F EYB26_001826 uncharacterized protein K10609 CUL4; cullin 4
F EYB26_008424 uncharacterized protein K10610 DDB1; DNA damage-binding protein 1
F EYB26_008069 uncharacterized protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F EYB26_004901 uncharacterized protein K10841 ERCC6; DNA excision repair protein ERCC-6
F EYB26_004681 uncharacterized protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E EYB26_004296 uncharacterized protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E EYB26_002855 uncharacterized protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E EYB26_005388 uncharacterized protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E EYB26_006994 uncharacterized protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E EYB26_001535 uncharacterized protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E EYB26_004613 uncharacterized protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E EYB26_009946 uncharacterized protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E EYB26_005604 uncharacterized protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E EYB26_002216 uncharacterized protein K06634 CCNH; cyclin H
E EYB26_003921 uncharacterized protein K06634 CCNH; cyclin H
E EYB26_008033 uncharacterized protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E EYB26_001299 uncharacterized protein K07466 RFA1; replication factor A1
E EYB26_008408 uncharacterized protein K10739 RFA2; replication factor A2
D Other NER factors
E EYB26_005144 uncharacterized protein K10847 XPA; DNA-repair protein complementing XP-A cells
E EYB26_001222 uncharacterized protein K10849 ERCC1; DNA excision repair protein ERCC-1
E EYB26_000340 uncharacterized protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E EYB26_007924 uncharacterized protein K10846 ERCC5; DNA excision repair protein ERCC-5
E EYB26_005781 uncharacterized protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E EYB26_009425 uncharacterized protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E EYB26_005914 uncharacterized protein K03869 CUL3; cullin 3
E EYB26_002051 uncharacterized protein K03872 ELOC; elongin-C
E EYB26_005697 uncharacterized protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E EYB26_001035 uncharacterized protein K08735 MSH2; DNA mismatch repair protein MSH2
E EYB26_004890 uncharacterized protein K08736 MSH3; DNA mismatch repair protein MSH3
E EYB26_003410 uncharacterized protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E EYB26_001557 uncharacterized protein K08734 MLH1; DNA mismatch repair protein MLH1
E EYB26_002004 uncharacterized protein K10858 PMS2; DNA mismatch repair protein PMS2
E EYB26_001238 uncharacterized protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E EYB26_002318 uncharacterized protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E EYB26_007102 uncharacterized protein K02328 POLD2; DNA polymerase delta subunit 2
E EYB26_002046 uncharacterized protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E EYB26_001299 uncharacterized protein K07466 RFA1; replication factor A1
E EYB26_008408 uncharacterized protein K10739 RFA2; replication factor A2
D RFC (replication factor C)
E EYB26_007316 uncharacterized protein K10754 RFC1; replication factor C subunit 1
E EYB26_009654 uncharacterized protein K10755 RFC2_4; replication factor C subunit 2/4
E EYB26_009819 uncharacterized protein K10755 RFC2_4; replication factor C subunit 2/4
E EYB26_005156 uncharacterized protein K10756 RFC3_5; replication factor C subunit 3/5
E EYB26_007313 uncharacterized protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E EYB26_008291 uncharacterized protein K04802 PCNA; proliferating cell nuclear antigen
E EYB26_009732 uncharacterized protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E EYB26_005781 uncharacterized protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E EYB26_004053 uncharacterized protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E EYB26_008364 uncharacterized protein K10865 MRE11; double-strand break repair protein MRE11
E EYB26_005222 uncharacterized protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E EYB26_008364 uncharacterized protein K10865 MRE11; double-strand break repair protein MRE11
E EYB26_005222 uncharacterized protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E EYB26_003123 uncharacterized protein K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E EYB26_003123 uncharacterized protein K04482 RAD51; DNA repair protein RAD51
E EYB26_005491 uncharacterized protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E EYB26_001192 uncharacterized protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E EYB26_003945 uncharacterized protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E EYB26_006026 uncharacterized protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E EYB26_001419 uncharacterized protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E EYB26_001419 uncharacterized protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E EYB26_000960 uncharacterized protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E EYB26_009751 uncharacterized protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E EYB26_001299 uncharacterized protein K07466 RFA1; replication factor A1
E EYB26_008408 uncharacterized protein K10739 RFA2; replication factor A2
D Protein phosphatase 4
E EYB26_002257 uncharacterized protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E EYB26_007231 uncharacterized protein K22803 SMC5; structural maintenance of chromosomes protein 5
E EYB26_009115 uncharacterized protein K22804 SMC6; structural maintenance of chromosomes protein 6
E EYB26_009170 uncharacterized protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E EYB26_001688 uncharacterized protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E EYB26_004034 uncharacterized protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E EYB26_002067 uncharacterized protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E EYB26_000744 uncharacterized protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E EYB26_003127 uncharacterized protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E EYB26_004546 uncharacterized protein K10991 SWI5; DNA repair protein Swi5/Sae3
E EYB26_006072 uncharacterized protein K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E EYB26_004259 uncharacterized protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E EYB26_000412 uncharacterized protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E EYB26_005266 uncharacterized protein K11339 MORF4L1; mortality factor 4-like protein 1
E EYB26_003953 uncharacterized protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E EYB26_008510 uncharacterized protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E EYB26_008541 uncharacterized protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E EYB26_002249 uncharacterized protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E EYB26_003209 uncharacterized protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E EYB26_008364 uncharacterized protein K10865 MRE11; double-strand break repair protein MRE11
E EYB26_005222 uncharacterized protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E EYB26_001593 uncharacterized protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E EYB26_004158 uncharacterized protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E EYB26_003116 uncharacterized protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
E EYB26_005767 uncharacterized protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E EYB26_002272 uncharacterized protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E EYB26_008249 uncharacterized protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E EYB26_009491 uncharacterized protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E EYB26_001419 uncharacterized protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E EYB26_000960 uncharacterized protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E EYB26_009751 uncharacterized protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E EYB26_008452 uncharacterized protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E EYB26_003123 uncharacterized protein K04482 RAD51; DNA repair protein RAD51
E EYB26_001980 uncharacterized protein K11137 TELO2; telomere length regulation protein
E EYB26_001562 uncharacterized protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E EYB26_002027 uncharacterized protein K23314 WRAP53; telomerase Cajal body protein 1
E EYB26_002215 uncharacterized protein K24752 WDR70; WD repeat-containing protein 70
E EYB26_004053 uncharacterized protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D EYB26_003968 uncharacterized protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D EYB26_000120 uncharacterized protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D EYB26_001440 uncharacterized protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D EYB26_008901 uncharacterized protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D EYB26_000058 uncharacterized protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D EYB26_002309 uncharacterized protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D EYB26_005960 uncharacterized protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D EYB26_004502 uncharacterized protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D EYB26_005425 uncharacterized protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D EYB26_000294 uncharacterized protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D EYB26_008291 uncharacterized protein K04802 PCNA; proliferating cell nuclear antigen
D EYB26_004045 uncharacterized protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D EYB26_003525 uncharacterized protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D EYB26_000233 uncharacterized protein K10903 HUS1; HUS1 checkpoint protein
D EYB26_005217 uncharacterized protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D EYB26_007629 uncharacterized protein K06662 HRAD17; cell cycle checkpoint protein
D EYB26_009654 uncharacterized protein K10755 RFC2_4; replication factor C subunit 2/4
D EYB26_009819 uncharacterized protein K10755 RFC2_4; replication factor C subunit 2/4
D EYB26_005156 uncharacterized protein K10756 RFC3_5; replication factor C subunit 3/5
D EYB26_007313 uncharacterized protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D EYB26_005217 uncharacterized protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D EYB26_004615 uncharacterized protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D EYB26_004659 uncharacterized protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D EYB26_005009 uncharacterized protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D EYB26_001980 uncharacterized protein K11137 TELO2; telomere length regulation protein
D EYB26_005780 uncharacterized protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D EYB26_005145 uncharacterized protein K23388 UBL4; ubiquitin-like protein 4
D EYB26_009651 uncharacterized protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D EYB26_004662 uncharacterized protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D EYB26_001824 uncharacterized protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D EYB26_003859 uncharacterized protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D EYB26_005601 uncharacterized protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D EYB26_005912 uncharacterized protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D EYB26_007168 uncharacterized protein K06630 YWHAE; 14-3-3 protein epsilon
D EYB26_008090 uncharacterized protein K06630 YWHAE; 14-3-3 protein epsilon
D EYB26_005649 uncharacterized protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D EYB26_000848 uncharacterized protein K24664 FKH; forkhead protein FKH
D EYB26_003271 uncharacterized protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D EYB26_003887 uncharacterized protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D EYB26_005905 uncharacterized protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D EYB26_008756 uncharacterized protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D EYB26_002875 uncharacterized protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
D EYB26_004962 uncharacterized protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D EYB26_003450 uncharacterized protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D EYB26_001867 uncharacterized protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D EYB26_005810 uncharacterized protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D EYB26_001062 uncharacterized protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D EYB26_005455 uncharacterized protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D EYB26_008584 uncharacterized protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D EYB26_008570 uncharacterized protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D EYB26_001248 uncharacterized protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D EYB26_005959 uncharacterized protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D EYB26_009389 uncharacterized protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E EYB26_001318 uncharacterized protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E EYB26_001261 uncharacterized protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E EYB26_005415 uncharacterized protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E EYB26_000155 uncharacterized protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E EYB26_007061 uncharacterized protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E EYB26_007061 uncharacterized protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D EYB26_008584 uncharacterized protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D EYB26_008570 uncharacterized protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024