+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Verrucomicrobia bacterium S94
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ACRISPR-Cas system
B Universal Cas proteins
C EGM51_01825 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
C EGM51_16660 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
C EGM51_01830 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
C EGM51_16665 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D EGM51_01795 CRISPR-associated endonuclease Cas3'' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D EGM51_01820 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-B factors
D EGM51_01820 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D EGM51_01805 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D EGM51_01810 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D EGM51_01820 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D EGM51_01800 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d
C Subtype I-D factors
D EGM51_01820 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D EGM51_01820 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
D EGM51_16640 cmr1; type III-B CRISPR module RAMP protein Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1
D EGM51_16610 cas10; type III-B CRISPR-associated protein Cas10/Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2
D EGM51_16620 hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3
D EGM51_16625 cmr4; type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D EGM51_16630 cmr5; type III-B CRISPR module-associated protein Cmr5 K19141 cmr5; CRISPR-associated protein Cmr5
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C EGM51_13085 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C EGM51_15735 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C EGM51_13060 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C EGM51_12425 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C EGM51_15745 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C EGM51_13050 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C EGM51_12430 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C EGM51_15750 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D EGM51_01005 DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type III R-M system
C EGM51_13540 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
C EGM51_09470 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
D EGM51_14030 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D EGM51_14025 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
C HipA-HipB
D EGM51_13035 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D EGM51_13040 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
D EGM51_16120 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
C Doc-Phd
C HigB-HigA
D EGM51_16135 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D EGM51_01855 hypothetical protein K03531 ftsZ; cell division protein FtsZ
D EGM51_15730 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D EGM51_01380 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D EGM51_01420 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D EGM51_10790 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D EGM51_11675 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C EGM51_04370 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C EGM51_06510 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023