+D GENES KO
#
KEGG Orthology (KO) - Vibrio cholerae O1 El Tor FJ147
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vcf00010]
D IR04_06830 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IR04_18495 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IR04_17810 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D IR04_18490 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IR04_07415 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IR04_18405 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IR04_03670 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IR04_15135 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IR04_07405 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IR04_06600 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D IR04_17325 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IR04_03035 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_15175 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_07445 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_04345 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D IR04_17150 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IR04_17145 aceF; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_02205 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D IR04_15305 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D IR04_14270 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D IR04_09475 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D IR04_06385 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IR04_13180 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IR04_15615 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IR04_15140 aldose epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D IR04_18735 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D IR04_11720 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IR04_13020 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IR04_10165 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IR04_15205 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:vcf00020]
D IR04_15600 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D IR04_07970 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D IR04_11030 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IR04_15570 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D IR04_15565 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_15555 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IR04_15560 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IR04_15580 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IR04_15575 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IR04_15590 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IR04_15585 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IR04_18340 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IR04_18345 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IR04_18350 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D IR04_18355 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D IR04_11815 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D IR04_13080 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IR04_07130 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IR04_18735 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D IR04_17150 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IR04_17145 aceF; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IR04_02205 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:vcf00030]
D IR04_06830 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IR04_03920 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IR04_03925 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D IR04_03930 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D IR04_18205 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IR04_07385 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IR04_02655 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IR04_02650 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D IR04_17480 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D IR04_16855 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D IR04_00580 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D IR04_16845 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D IR04_15615 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IR04_16000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D IR04_06345 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D IR04_06330 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D IR04_06340 idnK; gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D IR04_07415 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IR04_17810 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D IR04_18490 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IR04_18495 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:vcf00040]
D IR04_03390 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D IR04_01080 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D IR04_01075 xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D IR04_01090 araD; ribulose 5-phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D IR04_18205 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:vcf00051]
D IR04_06255 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IR04_02810 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IR04_14310 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IR04_06250 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IR04_06135 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IR04_04590 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IR04_06130 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D IR04_06140 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D IR04_18495 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IR04_17810 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D IR04_18490 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IR04_04615 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D IR04_02145 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D IR04_07415 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IR04_18405 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IR04_14275 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D IR04_14290 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D IR04_02140 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IR04_04610 PTS system mannitol-specific transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:vcf00052]
D IR04_13180 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IR04_13185 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IR04_13190 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IR04_03365 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IR04_15615 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IR04_16795 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D IR04_13670 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D IR04_18495 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IR04_02805 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:vcf00053]
D IR04_03390 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D IR04_01095 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D IR04_01100 PTS ascorbate-specific subunit IIBC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D IR04_01110 ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D IR04_01080 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D IR04_01075 xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D IR04_01090 araD; ribulose 5-phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:vcf00500]
D IR04_02795 PTS system trehalose-specific transporter subunits IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D IR04_02805 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IR04_11715 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D IR04_11705 cytochrome C biogenesis protein CcmE K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D IR04_11710 PTS sugar transporter K02761 celB; cellobiose PTS system EIIC component
D IR04_11720 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IR04_13020 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IR04_13850 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D IR04_02995 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D IR04_13845 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D IR04_00060 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D IR04_00050 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D IR04_18555 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D IR04_03745 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D IR04_00055 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D IR04_10165 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IR04_04530 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D IR04_09905 PTS system trehalose(maltose)-specific transporter subunits IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D IR04_09910 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D IR04_15615 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IR04_06830 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IR04_06255 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IR04_02810 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vcf00520]
D IR04_00115 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D IR04_14910 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D IR04_08875 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D IR04_08015 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IR04_16240 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IR04_08010 N,N'-diacetylchitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D IR04_10165 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IR04_10310 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D IR04_12890 N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D IR04_14095 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D IR04_10305 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D IR04_04510 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D IR04_08020 N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D IR04_06255 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IR04_02810 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IR04_07455 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IR04_08140 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D IR04_18905 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D IR04_05965 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D IR04_08865 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D IR04_05960 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D IR04_08870 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D IR04_17680 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IR04_06490 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IR04_14090 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D IR04_14085 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D IR04_14065 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D IR04_09945 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D IR04_09950 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D IR04_15205 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D IR04_15615 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IR04_03390 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D IR04_13185 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IR04_13190 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IR04_03365 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IR04_06830 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IR04_14310 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IR04_06250 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IR04_06135 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IR04_04590 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IR04_06130 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D IR04_06140 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D IR04_06145 perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102]
D IR04_13850 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D IR04_02995 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:vcf00620]
D IR04_06385 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IR04_02205 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D IR04_17150 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IR04_17145 aceF; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_14495 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D IR04_15305 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D IR04_10820 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IR04_01040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IR04_10815 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IR04_03035 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_15175 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_07445 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_16360 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D IR04_06375 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D IR04_06370 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D IR04_10330 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D IR04_12050 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D IR04_14270 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D IR04_09475 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D IR04_04325 lldD; lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D IR04_00860 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D IR04_04330 4Fe-4S ferredoxin K18930 dld; D-lactate dehydrogenase
D IR04_10380 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D IR04_16325 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D IR04_11650 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D IR04_03875 hypothetical protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D IR04_11255 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D IR04_18455 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D IR04_07735 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D IR04_09355 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D IR04_09350 oxaloacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IR04_07740 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IR04_09360 sodium pump decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D IR04_07730 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D IR04_07130 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IR04_11815 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D IR04_13080 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IR04_18340 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IR04_18345 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IR04_18350 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D IR04_18355 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D IR04_18305 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D IR04_18735 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D IR04_04345 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D IR04_09080 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_17525 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vcf00630]
D IR04_09085 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D IR04_06385 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IR04_09080 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D IR04_07130 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IR04_15600 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D IR04_07970 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_02965 3-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D IR04_17625 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D IR04_18200 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D IR04_06930 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IR04_18775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IR04_01245 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_10060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_01235 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IR04_01255 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_01240 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D IR04_03955 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IR04_06330 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D IR04_12795 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D IR04_12790 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D IR04_12785 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma
D IR04_15100 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:vcf00640]
D IR04_06385 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IR04_11980 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D IR04_10820 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IR04_01040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IR04_10815 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_14495 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D IR04_05045 quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D IR04_16360 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D IR04_06375 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D IR04_06370 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D IR04_10330 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D IR04_15560 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IR04_15555 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IR04_11965 methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D IR04_11970 aconitate hydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D IR04_11975 3-methylitaconate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D IR04_07970 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D IR04_11960 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D IR04_03050 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D IR04_03005 aldehyde reductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:vcf00650]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D IR04_03410 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D IR04_15305 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D IR04_02950 poly(3-hydroxyalkanoate) synthetase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D IR04_02965 3-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D IR04_09350 oxaloacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IR04_07740 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IR04_15580 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IR04_15575 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IR04_15590 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IR04_15585 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IR04_18340 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IR04_18345 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IR04_18350 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D IR04_18355 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D IR04_13920 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IR04_14495 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D IR04_02205 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D IR04_03615 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D IR04_13160 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_17495 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_05070 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_17490 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IR04_05065 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D IR04_13165 3-oxoacyl-ACP reductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:vcf00660]
D IR04_13160 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_17495 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_05070 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_17490 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IR04_05065 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D IR04_15560 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IR04_15555 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IR04_17535 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D IR04_17540 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D IR04_17530 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vcf00562]
D IR04_09120 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D IR04_18405 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vcf00190]
D IR04_14610 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D IR04_15580 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IR04_15575 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IR04_15590 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IR04_15585 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IR04_18340 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IR04_18345 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IR04_18350 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D IR04_18355 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D IR04_07835 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D IR04_07845 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D IR04_12450 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D IR04_12445 hypothetical protein K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D IR04_12440 cytochrome C oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D IR04_12435 cytochrome Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D IR04_14385 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IR04_13070 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IR04_03800 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IR04_14380 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IR04_13065 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IR04_03805 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IR04_14375 membrane protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D IR04_18925 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D IR04_18915 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D IR04_18920 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D IR04_18930 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D IR04_18910 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D IR04_18945 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D IR04_18935 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D IR04_18940 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D IR04_17815 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D IR04_13655 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D IR04_09035 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IR04_09060 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:vcf00680]
D IR04_12795 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D IR04_12790 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D IR04_12785 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma
D IR04_01245 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_10060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_06930 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IR04_17625 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D IR04_17325 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IR04_18305 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D IR04_07130 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IR04_07415 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IR04_17810 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D IR04_18490 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IR04_18495 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IR04_13675 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D IR04_13680 nitrate reductase K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D IR04_13815 molecular chaperone TorD K03533 torD; TorA specific chaperone
D IR04_14905 cytochrome C K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D IR04_14900 trimethylamine N-oxide reductase I catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D IR04_10820 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IR04_01040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IR04_10815 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IR04_06385 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IR04_04345 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D IR04_06600 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D IR04_17485 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IR04_02680 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IR04_11115 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IR04_16830 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:vcf00910]
D IR04_02895 nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D IR04_02900 nitrate reductase K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D IR04_12695 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IR04_18775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IR04_16955 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IR04_16965 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IR04_16970 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IR04_16960 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IR04_07895 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D IR04_01225 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vcf00920]
D IR04_07635 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D IR04_07640 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D IR04_07645 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D IR04_07650 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D IR04_17880 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IR04_17885 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IR04_17875 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D IR04_18660 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D IR04_06880 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D IR04_06870 cysJ; sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D IR04_06875 sulfite reductase subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D IR04_02635 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IR04_05435 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D IR04_18315 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09955 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09975 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_10645 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IR04_10180 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IR04_13280 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D IR04_18465 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vcf00061]
D IR04_16360 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D IR04_06375 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D IR04_06370 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D IR04_10330 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D IR04_15240 acyl carrier protein K02078 acpP; acyl carrier protein
D IR04_06165 acyl carrier protein K02078 acpP; acyl carrier protein
D IR04_15250 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IR04_03245 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IR04_15255 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IR04_15675 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D IR04_15235 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IR04_15245 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IR04_12660 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D IR04_16385 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D IR04_03410 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D IR04_17500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_15065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_06170 rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_16810 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vcf00071]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_18890 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_10570 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D IR04_16300 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D IR04_13900 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D IR04_17500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_15065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_06170 rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_16810 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_15305 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vcf00561]
D IR04_03955 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IR04_03215 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D IR04_05400 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D IR04_15260 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D IR04_07565 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D IR04_17675 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IR04_03060 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D IR04_00980 lactonizing lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D IR04_13670 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:vcf00564]
D IR04_18320 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D IR04_03230 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D IR04_02815 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D IR04_03235 glycerol-3-phosphate dehydrogenase K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D IR04_03240 glpC; glycerol-3-phosphate dehydrogenase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D IR04_05400 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D IR04_07565 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D IR04_17675 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IR04_03060 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D IR04_05835 patatin K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D IR04_05575 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D IR04_13000 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D IR04_00610 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D IR04_14835 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D IR04_16415 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D IR04_06480 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D IR04_06615 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D IR04_11390 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D IR04_16460 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D IR04_00155 phospholipid phosphatase K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D IR04_13570 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:vcf00600]
D IR04_16795 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D IR04_13670 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D IR04_08015 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IR04_16240 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:vcf00592]
D IR04_05835 patatin K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D IR04_18890 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_10570 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vcf01040]
D IR04_03405 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D IR04_13725 acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vcf00230]
D IR04_03320 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D IR04_17260 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D IR04_18655 ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D IR04_16845 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D IR04_15615 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IR04_16000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D IR04_10350 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IR04_06275 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D IR04_16285 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D IR04_11455 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D IR04_16280 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D IR04_05170 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D IR04_05175 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D IR04_11265 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D IR04_10955 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D IR04_06280 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IR04_10605 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D IR04_02280 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IR04_15955 ushA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IR04_07605 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D IR04_10970 guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D IR04_03490 guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D IR04_00230 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IR04_16840 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IR04_04255 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D IR04_08955 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D IR04_07890 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D IR04_09230 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IR04_09175 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IR04_08920 yjjX; inositol monophosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D IR04_07295 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D IR04_16520 xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D IR04_09235 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IR04_00880 guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D IR04_18590 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D IR04_11580 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IR04_11575 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IR04_02115 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D IR04_15040 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D IR04_15035 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D IR04_18600 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D IR04_09030 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D IR04_06410 guanosine polyphosphate pyrophosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D IR04_17345 relA; (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D IR04_05515 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D IR04_18095 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D IR04_18805 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D IR04_09850 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D IR04_17160 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D IR04_17895 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D IR04_10270 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IR04_17340 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D IR04_17250 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D IR04_07180 bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D IR04_17875 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D IR04_17880 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IR04_17885 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IR04_02345 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:vcf00240]
D IR04_17035 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IR04_17040 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IR04_17660 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D IR04_17665 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D IR04_04055 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D IR04_12690 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D IR04_05985 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D IR04_14715 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D IR04_16430 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D IR04_09175 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IR04_17340 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D IR04_07060 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D IR04_13300 metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D IR04_17330 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D IR04_14740 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D IR04_10520 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D IR04_02280 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IR04_15955 ushA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IR04_07605 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D IR04_02585 dUMP phosphatase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D IR04_10495 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D IR04_00600 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D IR04_04255 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D IR04_16275 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D IR04_17160 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D IR04_17895 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D IR04_09850 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D IR04_11465 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D IR04_02115 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D IR04_11580 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IR04_11575 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IR04_15035 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D IR04_03665 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D IR04_15220 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D IR04_16850 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D IR04_11155 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D IR04_08795 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vcf00250]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D IR04_17430 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D IR04_15115 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D IR04_18100 peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D IR04_10290 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D IR04_15030 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IR04_06930 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IR04_14685 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D IR04_18540 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D IR04_18285 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IR04_18280 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IR04_18095 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D IR04_10955 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D IR04_17660 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D IR04_17665 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D IR04_13920 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IR04_16955 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IR04_16965 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IR04_16970 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IR04_16960 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IR04_12695 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IR04_04735 pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IR04_18775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IR04_17035 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IR04_17040 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IR04_07285 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IR04_07455 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IR04_10350 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vcf00260]
D IR04_07675 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_03585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_06925 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_16915 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D IR04_18470 metL; aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D IR04_15665 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IR04_15315 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IR04_16910 serine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D IR04_16905 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D IR04_03325 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D IR04_01245 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_10060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_06930 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IR04_17625 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D IR04_03955 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IR04_06600 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D IR04_17485 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IR04_02680 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IR04_11115 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IR04_16830 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D IR04_03865 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D IR04_03860 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D IR04_01235 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IR04_01255 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_01240 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D IR04_06480 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D IR04_02850 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IR04_11795 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IR04_05050 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IR04_03815 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D IR04_11855 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D IR04_11165 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D IR04_11170 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D IR04_13350 aminotransferase class III K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D IR04_03595 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D IR04_03600 2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D IR04_03590 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vcf00270]
D IR04_18315 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09955 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09975 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_10645 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IR04_10180 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IR04_13575 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IR04_06920 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D IR04_13740 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D IR04_07375 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D IR04_16980 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D IR04_08955 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D IR04_11760 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D IR04_12725 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D IR04_00885 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IR04_07765 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D IR04_07675 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_03585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_06925 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_16915 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D IR04_18470 metL; aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D IR04_15665 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IR04_15315 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IR04_13280 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D IR04_18465 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IR04_05060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IR04_07760 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D IR04_07355 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D IR04_02635 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IR04_11855 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D IR04_07130 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IR04_02850 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IR04_11795 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IR04_07630 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D IR04_17485 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IR04_02680 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IR04_11115 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vcf00280]
D IR04_05060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D IR04_18890 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_10570 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_00030 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D IR04_03615 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vcf00290]
D IR04_05050 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IR04_17535 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D IR04_17540 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D IR04_17530 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D IR04_13160 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_17495 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_05070 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_17490 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IR04_05065 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D IR04_05720 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D IR04_05055 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IR04_05060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IR04_05010 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D IR04_15030 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IR04_17525 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vcf00300]
D IR04_07675 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_03585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_06925 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_16915 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D IR04_18470 metL; aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D IR04_15665 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IR04_15315 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IR04_15890 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IR04_17050 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D IR04_16750 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D IR04_18170 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IR04_15870 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IR04_05535 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D IR04_05530 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IR04_17120 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IR04_17115 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vcf00310]
D IR04_15565 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_11855 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D IR04_06305 lysine decarboxylase LdcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D IR04_13920 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IR04_00655 hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D IR04_11305 membrane protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:vcf00220]
D IR04_17650 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D IR04_18285 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IR04_18280 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IR04_07085 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D IR04_07285 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IR04_18775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IR04_12695 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D IR04_15030 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IR04_16705 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D IR04_01915 GCN5 family acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D IR04_18290 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D IR04_18295 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D IR04_18170 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IR04_18300 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vcf00330]
D IR04_03555 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D IR04_03550 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D IR04_04700 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D IR04_13345 saccharopine dehydrogenase K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D IR04_13340 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D IR04_04155 spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D IR04_18165 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D IR04_11520 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D IR04_07315 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D IR04_04735 pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IR04_16505 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D IR04_16500 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:vcf00340]
D IR04_10985 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D IR04_11020 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D IR04_11010 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D IR04_11005 imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D IR04_11015 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D IR04_11000 imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D IR04_10995 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IR04_10990 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D IR04_11325 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D IR04_11330 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D IR04_11340 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D IR04_11335 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:vcf00350]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D IR04_10995 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IR04_11760 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D IR04_12005 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D IR04_12010 dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D IR04_12020 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D IR04_12015 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D IR04_15305 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D IR04_18400 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D IR04_13920 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:vcf00360]
D IR04_03610 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D IR04_10995 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IR04_11760 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D IR04_12005 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D IR04_09320 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00380 Tryptophan metabolism [PATH:vcf00380]
D IR04_15565 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_00720 tnaA; cysteine desulfhydrase K01667 tnaA; tryptophanase [EC:4.1.99.1]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vcf00400]
D IR04_08890 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IR04_12765 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IR04_04565 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IR04_18220 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D IR04_06380 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D IR04_05190 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D IR04_18225 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D IR04_13870 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D IR04_15705 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D IR04_11190 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IR04_11185 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D IR04_11180 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D IR04_11175 indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D IR04_11165 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D IR04_11170 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D IR04_08895 tyrA; chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D IR04_08935 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D IR04_10995 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IR04_11760 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D IR04_03610 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vcf00410]
D IR04_07915 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:vcf00430]
D IR04_05905 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IR04_14685 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D IR04_12695 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IR04_10815 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IR04_10820 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IR04_01040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:vcf00440]
D IR04_02575 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D IR04_02565 2-aminoethylphosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D IR04_01735 GCN5 family acetyltransferase K03823 pat; phosphinothricin acetyltransferase [EC:2.3.1.183]
C 00450 Selenocompound metabolism [PATH:vcf00450]
D IR04_18465 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IR04_13575 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IR04_06920 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D IR04_13740 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D IR04_11225 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D IR04_17880 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IR04_17885 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IR04_10505 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vcf00460]
D IR04_05905 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IR04_15115 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D IR04_18100 peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D IR04_01245 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_10060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vcf00470]
D IR04_06820 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IR04_02420 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IR04_11855 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D IR04_07285 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IR04_05680 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D IR04_17105 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IR04_03815 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D IR04_05535 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D IR04_05530 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IR04_09320 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:vcf00480]
D IR04_05905 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IR04_03370 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D IR04_03380 allophanate hydrolase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D IR04_07760 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D IR04_07355 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D IR04_17610 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D IR04_09170 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D IR04_12705 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IR04_16530 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D IR04_11030 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IR04_03930 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D IR04_03920 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IR04_18265 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D IR04_12035 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D IR04_04700 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:vcf00511]
D IR04_16795 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D IR04_08015 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IR04_16240 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:vcf00540]
D IR04_16380 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D IR04_17070 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D IR04_16390 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D IR04_14415 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D IR04_16375 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D IR04_14550 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D IR04_17720 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D IR04_15960 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D IR04_17725 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D IR04_14540 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D IR04_06090 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D IR04_05995 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D IR04_05990 lauroyl acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D IR04_14500 exonuclease K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D IR04_04875 hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D IR04_06060 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D IR04_16295 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D IR04_17270 heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D IR04_09895 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D IR04_06125 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D IR04_06105 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D IR04_06110 polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vcf00541]
D IR04_03365 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IR04_03390 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D IR04_14310 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IR04_06250 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IR04_06135 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IR04_04590 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IR04_06130 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D IR04_06140 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D IR04_06145 perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102]
D IR04_18905 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D IR04_09945 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D IR04_09950 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D IR04_06210 nucleoside-diphosphate sugar epimerase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D IR04_06215 NAD-dependent dehydratase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:vcf00550]
D IR04_17680 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IR04_06490 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IR04_17090 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D IR04_17105 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IR04_17120 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IR04_02420 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IR04_17115 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D IR04_16420 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D IR04_07580 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IR04_17515 membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IR04_17110 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IR04_17095 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IR04_18255 penicillin-sensitive transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D IR04_07960 peptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D IR04_10100 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D IR04_17125 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IR04_01210 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IR04_10085 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IR04_08105 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:vcf00552]
D IR04_07580 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IR04_17515 membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IR04_06210 nucleoside-diphosphate sugar epimerase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vcf00543]
D IR04_10025 capsular biosynthesis protein K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D IR04_09960 glycosyl transferase family 1 K20921 vpsD; polysaccharide biosynthesis protein VpsD
D IR04_09985 polysaccharide biosynthesis protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D IR04_09995 UDP-N-acetyl-D-mannosamine transferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D IR04_18315 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09955 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09975 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vcf00730]
D IR04_05245 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D IR04_11775 hydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D IR04_05255 molybdopterin-synthase adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D IR04_09135 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IR04_09825 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D IR04_05270 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D IR04_09800 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D IR04_05265 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D IR04_16465 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D IR04_06620 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IR04_10270 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:vcf00740]
D IR04_11615 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IR04_16480 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D IR04_16490 ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D IR04_05550 2-haloalkanoic acid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D IR04_04685 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D IR04_16475 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D IR04_16485 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D IR04_08825 FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D IR04_06445 fre; FMN reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D IR04_08995 NADPH-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D IR04_03320 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D IR04_17260 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D IR04_17800 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vcf00750]
D IR04_07400 gapA; glyceraldehyde-3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D IR04_15670 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D IR04_11115 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IR04_07195 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D IR04_17380 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D IR04_16905 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vcf00760]
D IR04_17430 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D IR04_14330 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D IR04_17190 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D IR04_00425 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D IR04_00230 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IR04_16840 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IR04_02280 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IR04_15955 ushA; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IR04_07605 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D IR04_00925 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D IR04_17340 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D IR04_06575 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D IR04_00920 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D IR04_07655 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D IR04_03055 isochorismatase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D IR04_12775 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D IR04_09645 ppnK; inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D IR04_05650 pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D IR04_02370 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D IR04_02375 pntB; pyridine nucleotide transhydrogenase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D IR04_13920 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vcf00770]
D IR04_13160 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_17495 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_05070 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IR04_17490 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IR04_05065 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D IR04_05720 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D IR04_05055 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IR04_07920 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D IR04_16670 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D IR04_07915 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D IR04_06500 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D IR04_06005 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D IR04_17340 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D IR04_06040 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D IR04_17215 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D IR04_17375 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D IR04_03345 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D IR04_05060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IR04_11070 glutamate decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:vcf00780]
D IR04_10895 biotin synthase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D IR04_15675 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D IR04_15235 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IR04_15245 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IR04_16385 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D IR04_18640 pimelyl-ACP methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D IR04_10890 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D IR04_10880 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D IR04_10900 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D IR04_10885 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D IR04_06495 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vcf00785]
D IR04_10075 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D IR04_10070 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17150 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IR04_17145 aceF; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IR04_15570 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D IR04_15565 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D IR04_01235 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IR04_01255 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IR04_01240 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vcf00790]
D IR04_02615 folE; GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D IR04_07570 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D IR04_07925 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D IR04_07575 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D IR04_08135 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D IR04_08305 type VI secretion protein K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D IR04_08335 dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D IR04_07175 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IR04_08655 dihydrofolate reductase K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D IR04_10335 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D IR04_11615 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IR04_16480 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D IR04_18175 anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D IR04_11810 pabB; aminodeoxychorismate synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D IR04_15230 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D IR04_11790 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D IR04_03605 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D IR04_03610 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D IR04_12095 pyrroloquinoline quinone biosynthesis protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D IR04_12100 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D IR04_09865 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D IR04_10455 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D IR04_10465 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D IR04_10475 molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D IR04_10460 molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D IR04_12865 bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D IR04_02620 molybdenum cofactor biosynthesis protein MoaA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D IR04_12860 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vcf00670]
D IR04_07175 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IR04_08655 dihydrofolate reductase K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D IR04_02605 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D IR04_14870 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IR04_01245 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_10060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IR04_16285 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D IR04_06280 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IR04_05140 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D IR04_01255 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IR04_06920 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D IR04_08795 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D IR04_15100 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D IR04_18480 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vcf00860]
D IR04_16225 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IR04_15985 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D IR04_08070 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D IR04_05445 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D IR04_05505 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D IR04_05500 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D IR04_06580 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D IR04_05185 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D IR04_05485 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D IR04_18870 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D IR04_10275 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D IR04_05495 uroporphyrin-III methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D IR04_17890 uroporphyrin-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D IR04_12085 ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D IR04_08585 ATPase K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D IR04_10530 cobinamide adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D IR04_03125 cobalamin biosynthesis protein CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D IR04_16985 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D IR04_11510 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D IR04_11505 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D IR04_11500 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D IR04_11515 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D IR04_03975 HugZ protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D IR04_06785 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vcf00130]
D IR04_05410 chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D IR04_05405 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D IR04_06435 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D IR04_17800 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D IR04_17455 oxidoreductase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D IR04_11585 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D IR04_17460 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D IR04_05350 ubiE; ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D IR04_10160 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D IR04_15025 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D IR04_09265 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D IR04_15020 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D IR04_15015 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D IR04_15005 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D IR04_15000 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D IR04_15010 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D IR04_02455 esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D IR04_18420 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D IR04_15930 Trp operon repressor K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D IR04_12005 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vcf00900]
D IR04_09800 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D IR04_16410 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D IR04_07590 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D IR04_15995 kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D IR04_07595 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D IR04_09190 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D IR04_08845 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_03105 3-hydroxy-3-methylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D IR04_17800 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D IR04_09805 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D IR04_07145 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D IR04_16420 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:vcf00907]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D IR04_18890 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_10570 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D IR04_07385 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IR04_02655 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:vcf01053]
D IR04_15025 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D IR04_09265 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D IR04_09255 Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D IR04_09270 2,3-dihydroxybenzoate-2,3-dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D IR04_09300 vibriobactin synthase D K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D IR04_09260 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D IR04_13110 enterobactin synthase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D IR04_09275 vibriobactin synthetase K04778 vibH; vibriobactin synthetase
D IR04_16200 peptide synthetase K12237 vibF; nonribosomal peptide synthetase VibF
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:vcf00332]
D IR04_16505 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D IR04_16500 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:vcf00261]
D IR04_17880 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IR04_17885 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IR04_07675 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_03585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_06925 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IR04_16915 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D IR04_18470 metL; aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D IR04_15665 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IR04_15315 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IR04_15890 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IR04_17050 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vcf00521]
D IR04_15615 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IR04_09120 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:vcf00401]
D IR04_08895 tyrA; chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D IR04_10995 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IR04_11760 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D IR04_11190 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IR04_11185 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D IR04_15250 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IR04_15245 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D IR04_15240 acyl carrier protein K02078 acpP; acyl carrier protein
D IR04_06165 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vcf00999]
D IR04_07375 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D IR04_05190 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
D IR04_14875 hypothetical protein K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vcf00362]
D IR04_18890 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_10570 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_09350 oxaloacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IR04_07740 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vcf00627]
D IR04_12050 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D IR04_17800 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:vcf00625]
D IR04_15305 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:vcf00633]
D IR04_04375 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D IR04_18890 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IR04_10570 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:vcf00643]
D IR04_12010 dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D IR04_12020 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D IR04_12015 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:vcf00930]
D IR04_18885 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D IR04_10575 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:vcf00626]
D IR04_15305 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vcf03020]
D IR04_06560 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IR04_06565 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IR04_17940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IR04_18595 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vcf03010]
D IR04_14735 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D IR04_16440 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D IR04_18035 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D IR04_17945 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D IR04_17980 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D IR04_06790 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D IR04_06765 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D IR04_17995 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D IR04_07830 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D IR04_18070 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D IR04_17950 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D IR04_06760 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D IR04_17955 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D IR04_18000 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D IR04_08185 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D IR04_07785 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D IR04_18020 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D IR04_06800 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D IR04_18045 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D IR04_08815 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D IR04_07550 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D IR04_06545 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D IR04_18050 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D IR04_18065 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D IR04_18060 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D IR04_18005 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D IR04_17990 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D IR04_06555 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D IR04_06805 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D IR04_06550 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D IR04_06540 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D IR04_07825 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D IR04_18015 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D IR04_17970 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D IR04_18030 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D IR04_17935 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D IR04_17985 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D IR04_07800 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D IR04_01305 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D IR04_07150 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D IR04_18040 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D IR04_18055 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D IR04_18010 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D IR04_13420 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D IR04_07155 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D IR04_06020 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D IR04_18025 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D IR04_17975 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D IR04_09750 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D IR04_18450 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D IR04_15265 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D IR04_06025 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D IR04_04955 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D IR04_01300 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D IR04_09755 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IR04_17960 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IR04_18830 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_05690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_18860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_06885 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_06450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_17580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_08965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_05210 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_18820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_06465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_05220 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_05700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_06900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_17565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_08975 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_18840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_17550 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_05225 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_06905 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_08980 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_05705 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_18815 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_17560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_06470 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_18835 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vcf00970]
D IR04_05215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_06460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_06895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_17570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_18825 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_05755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07705 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07715 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07710 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_14865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07695 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07215 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IR04_07225 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IR04_07245 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IR04_10425 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IR04_05230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_08985 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_06910 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_06475 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_18810 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_11395 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IR04_03265 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IR04_03305 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IR04_16055 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_16030 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_16045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_16085 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_16075 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_05695 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IR04_18855 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IR04_08970 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IR04_06635 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_11400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_11410 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_06655 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_06640 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_06645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_02340 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_06515 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_05760 tRNA-His K14226 tRNA-His; tRNA His
D IR04_05770 tRNA-His K14226 tRNA-His; tRNA His
D IR04_06455 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IR04_06890 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IR04_17575 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IR04_08150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_03270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_11405 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_17590 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16070 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_18850 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IR04_16015 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_16065 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_16035 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_06670 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_08155 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_06650 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_06665 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_06660 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_07530 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_07235 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IR04_07260 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IR04_07250 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IR04_05765 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IR04_05775 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IR04_16250 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IR04_15345 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IR04_13975 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_05710 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_15350 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_07690 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_07700 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_07255 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_07230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_06505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_07220 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_17555 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_06520 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_05235 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D IR04_06510 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IR04_09915 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IR04_09925 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IR04_09920 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IR04_18845 tRNA-Val K14237 tRNA-Val; tRNA Val
D IR04_13205 tRNA-Val K14237 tRNA-Val; tRNA Val
D IR04_13210 tRNA-Val K14237 tRNA-Val; tRNA Val
D IR04_16225 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IR04_10315 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D IR04_09215 metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IR04_07670 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IR04_11150 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IR04_11780 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D IR04_05020 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D IR04_05015 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D IR04_01290 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IR04_10875 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IR04_14405 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IR04_10505 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IR04_05140 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D IR04_17620 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IR04_10125 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IR04_08830 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IR04_08745 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IR04_15510 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IR04_09740 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IR04_09195 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IR04_11425 phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IR04_11430 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IR04_08100 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IR04_07340 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IR04_18195 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vcf03060]
D IR04_17965 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IR04_06530 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IR04_08145 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IR04_02975 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IR04_09110 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IR04_09115 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IR04_02970 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IR04_09105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IR04_04945 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IR04_17060 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IR04_18325 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D IR04_07780 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IR04_05630 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IR04_05365 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA
D IR04_02220 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D IR04_05370 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D IR04_05375 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D IR04_17400 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IR04_08835 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vcf04122]
D IR04_09135 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IR04_02635 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IR04_05035 sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D IR04_15915 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D IR04_06755 sulfur relay protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D IR04_06750 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D IR04_06745 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D IR04_12055 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D IR04_10965 mnmA; tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D IR04_10475 molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D IR04_10455 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D IR04_10470 molybdopterin synthase K03636 moaD; sulfur-carrier protein
D IR04_02625 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D IR04_10465 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D IR04_10460 molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D IR04_09825 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D IR04_05260 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D IR04_05255 molybdopterin-synthase adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:vcf03018]
D IR04_08775 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D IR04_15290 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D IR04_06415 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D IR04_17325 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IR04_08190 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D IR04_03340 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D IR04_00910 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D IR04_12275 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D IR04_18080 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D IR04_03505 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IR04_05915 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IR04_06425 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D IR04_18495 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IR04_09655 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D IR04_18375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_03575 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_06700 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D IR04_09035 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IR04_09060 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D IR04_07930 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vcf03030]
D IR04_08370 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_06390 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_11750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_16310 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_16365 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IR04_10610 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IR04_15215 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IR04_10115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IR04_08235 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D IR04_17615 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D IR04_04980 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IR04_06815 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D IR04_07540 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D IR04_08565 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_06955 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_16315 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D IR04_16370 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D IR04_05455 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IR04_10195 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vcf03410]
D IR04_10385 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D IR04_16890 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D IR04_07275 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D IR04_06035 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D IR04_04480 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D IR04_13580 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D IR04_14465 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D IR04_16895 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D IR04_05455 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IR04_17165 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D IR04_10195 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vcf03420]
D IR04_14590 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D IR04_06940 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D IR04_10430 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D IR04_11385 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D IR04_05890 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IR04_05455 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IR04_10195 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vcf03430]
D IR04_07625 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D IR04_06690 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D IR04_08765 hypothetical protein K03573 mutH; DNA mismatch repair protein MutH
D IR04_05890 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IR04_11480 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D IR04_09225 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D IR04_09810 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D IR04_17165 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D IR04_08565 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_06955 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_16365 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IR04_04980 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IR04_10610 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IR04_10115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IR04_15215 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IR04_08370 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_06390 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_11750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_16310 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_17615 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D IR04_08235 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D IR04_10195 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IR04_18210 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:vcf03440]
D IR04_17165 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D IR04_08565 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_06955 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_04985 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D IR04_17385 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D IR04_10620 recR; recombination protein RecR K06187 recR; recombination protein RecR
D IR04_07660 recA; recombinase A K03553 recA; recombination protein RecA
D IR04_05455 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IR04_14395 ruvA; ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D IR04_14400 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D IR04_18605 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IR04_16725 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D IR04_16730 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D IR04_16720 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D IR04_16365 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IR04_04980 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IR04_10610 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IR04_10115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IR04_15215 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IR04_08370 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_06390 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_11750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_16310 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_17615 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D IR04_08235 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D IR04_18445 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D IR04_06795 primosomal replication protein N K02686 priB; primosomal replication protein N
D IR04_14450 prepilin peptidase K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vcf03250]
D IR04_16640 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vcf02010]
D IR04_07635 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D IR04_07640 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D IR04_07645 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D IR04_07650 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D IR04_12845 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D IR04_12850 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D IR04_12855 ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D IR04_03120 modA; molybdate transporter K02020 modA; molybdate transport system substrate-binding protein
D IR04_03115 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein
D IR04_03110 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D IR04_07990 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D IR04_02935 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D IR04_02560 phosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D IR04_07995 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D IR04_02940 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D IR04_02550 membrane protein K02011 afuB; iron(III) transport system permease protein
D IR04_08000 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D IR04_02945 fbpC; ferric transporter ATP-binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D IR04_02555 phosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D IR04_17795 tbpA; thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D IR04_17790 thiP; thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein
D IR04_17785 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D IR04_08930 Norspermidine sensor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IR04_04920 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IR04_12360 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IR04_12365 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IR04_12370 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D IR04_12375 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D IR04_12380 potA; putrescine/spermidine ABC transporter ATPase K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D IR04_04145 malE; sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D IR04_04140 malF; maltose transporter membrane protein K10109 malF; maltose/maltodextrin transport system permease protein
D IR04_04135 malG; maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D IR04_04150 maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IR04_04550 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IR04_17695 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D IR04_17700 toluene ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D IR04_17705 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D IR04_17690 NTP-binding protein K07122 mlaB; phospholipid transport system transporter-binding protein
D IR04_17710 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D IR04_00575 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D IR04_00570 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D IR04_00565 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D IR04_00560 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D IR04_11915 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D IR04_11925 mglC; beta-methylgalactoside transporter permease K10541 mglC; methyl-galactoside transport system permease protein
D IR04_11920 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D IR04_12975 glycerol 3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D IR04_12980 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D IR04_12985 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D IR04_12990 sugar ABC transporter ATPase K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D IR04_09025 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_03520 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_00295 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_09040 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D IR04_00300 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D IR04_09045 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D IR04_00305 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D IR04_09050 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IR04_00310 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IR04_03295 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D IR04_03285 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D IR04_03290 ABC transporter K09999 artQ; arginine transport system permease protein
D IR04_03300 arginine ABC transporter ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D IR04_12080 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D IR04_12075 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D IR04_12070 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D IR04_04970 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D IR04_04965 ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D IR04_04960 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D IR04_14480 nickel transporter K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D IR04_14470 amino acid ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D IR04_14475 ABC transporter K10024 aotQ; arginine/ornithine transport system permease protein
D IR04_14485 amino acid transporter K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D IR04_09880 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D IR04_09885 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D IR04_09890 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D IR04_10785 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D IR04_10790 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D IR04_10795 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D IR04_04290 peptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D IR04_10800 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D IR04_10805 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D IR04_13620 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D IR04_13625 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D IR04_13630 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein
D IR04_13635 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D IR04_13640 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D IR04_02510 antibiotic ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D IR04_02505 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein
D IR04_02500 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D IR04_02495 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D IR04_09280 antibiotic ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D IR04_09285 ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D IR04_09290 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D IR04_09295 fecE; iron-dicitrate transporter ATP-binding subunit K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D IR04_05945 iron-hydroxamate ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D IR04_05950 Fe3+-siderophore ABC transporter permease K23228 fhuB; ferric hydroxamate transport system permease protein
D IR04_05940 ABC transporter K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D IR04_16990 Vitamin B12-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D IR04_11525 Vitamin B12 import system permease BtuC K06073 btuC; vitamin B12 transport system permease protein
D IR04_11530 iron ABC transporter K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D IR04_15540 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D IR04_15550 membrane protein K09816 znuB; zinc transport system permease protein
D IR04_15545 znuC; zinc ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D IR04_06155 sugar transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D IR04_06160 sugar ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D IR04_14570 outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D IR04_14580 transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D IR04_14575 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D IR04_15415 heme transporter CcmD K02196 ccmD; heme exporter protein D
D IR04_15420 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D IR04_15425 heme ABC transporter permease K02194 ccmB; heme exporter protein B
D IR04_15430 cytochrome C biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D IR04_17605 lipopolysaccharide ABC transporter permease K07091 lptF; lipopolysaccharide export system permease protein
D IR04_17600 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D IR04_17740 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D IR04_05640 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IR04_05635 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IR04_14555 lipid transporter ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D IR04_04385 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D IR04_05930 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D IR04_04780 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D IR04_11215 amino acid ABC transporter permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D IR04_11220 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:vcf02060]
D IR04_10170 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D IR04_10175 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr
D IR04_10165 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IR04_15205 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D IR04_10310 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D IR04_02795 PTS system trehalose-specific transporter subunits IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D IR04_09905 PTS system trehalose(maltose)-specific transporter subunits IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D IR04_05965 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D IR04_04610 PTS system mannitol-specific transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D IR04_11715 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D IR04_11705 cytochrome C biogenesis protein CcmE K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D IR04_11710 PTS sugar transporter K02761 celB; cellobiose PTS system EIIC component
D IR04_01095 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D IR04_01100 PTS ascorbate-specific subunit IIBC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D IR04_02150 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D IR04_02140 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IR04_14290 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D IR04_14275 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D IR04_02145 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D IR04_08780 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D IR04_17765 phosphate ABC transporter permease K08485 ptsO; phosphocarrier protein NPr
D IR04_14295 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D IR04_17755 PTS sugar transporter K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vcf03070]
D IR04_17265 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D IR04_13045 membrane protein K12340 tolC; outer membrane protein
D IR04_18715 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D IR04_18720 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C
D IR04_18705 general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D IR04_18700 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D IR04_18695 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D IR04_18690 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D IR04_18685 general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D IR04_18680 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D IR04_18675 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L
D IR04_18670 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D IR04_18710 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D IR04_02975 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IR04_09110 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IR04_09115 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IR04_02970 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IR04_06530 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IR04_08145 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IR04_17965 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IR04_09105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IR04_04945 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IR04_17060 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IR04_05630 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IR04_18325 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D IR04_07780 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IR04_05365 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA
D IR04_02220 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D IR04_05370 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D IR04_05375 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D IR04_00545 type VI secretion protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D IR04_00070 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG
D IR04_12315 type VI secretion protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D IR04_00065 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D IR04_12310 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D IR04_00500 type VI secretion protein K11906 vasD; type VI secretion system protein VasD
D IR04_00535 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D IR04_00510 type IV secretion protein DotU K11892 impK; type VI secretion system protein ImpK
D IR04_00515 ATPase AAA K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vcf02020]
D IR04_09020 phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IR04_09015 transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D IR04_09025 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_03520 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_00295 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_18620 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D IR04_18515 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D IR04_18510 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D IR04_11890 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D IR04_11895 chemotaxis protein CheY K07661 rstA; two-component system, OmpR family, response regulator RstA
D IR04_04880 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D IR04_04885 XRE family transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D IR04_15830 flagellin B K02406 fliC; flagellin
D IR04_15835 flagellin K02406 fliC; flagellin
D IR04_15840 flagellin K02406 fliC; flagellin
D IR04_16095 flagellin K02406 fliC; flagellin
D IR04_16100 flagellin K02406 fliC; flagellin
D IR04_15475 RNA polymerase sigma 70 K02405 fliA; RNA polymerase sigma factor FliA
D IR04_09815 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D IR04_02210 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IR04_02215 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IR04_03040 chemotaxis protein CheY K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D IR04_13810 transcriptional regulator K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D IR04_13680 nitrate reductase K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D IR04_13675 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D IR04_13815 molecular chaperone TorD K03533 torD; TorA specific chaperone
D IR04_16940 ATPase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D IR04_16935 TorR family transcriptional regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D IR04_11940 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein
D IR04_11945 TctB K07794 tctB; putative tricarboxylic transport membrane protein
D IR04_11950 transporter K07795 tctC; putative tricarboxylic transport membrane protein
D IR04_04975 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D IR04_09345 ATPase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D IR04_09340 dpiA; two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D IR04_09370 citrate (pro-3S)-lyase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D IR04_09375 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D IR04_09380 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D IR04_09385 citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D IR04_09390 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D IR04_09395 2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D IR04_00915 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D IR04_11255 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D IR04_11685 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D IR04_02880 histidine kinase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D IR04_02875 nitrate/nitrite response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D IR04_18340 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IR04_18345 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IR04_18350 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D IR04_18355 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D IR04_03030 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D IR04_02930 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D IR04_02925 histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D IR04_02920 transcriptional regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D IR04_17355 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D IR04_11380 sirA; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D IR04_07680 carbon storage regulator K03563 csrA; carbon storage regulator
D IR04_13485 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D IR04_16450 protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D IR04_16340 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D IR04_18790 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D IR04_18795 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D IR04_18775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_03025 ABC transporter substrate-binding protein K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D IR04_03020 ATPase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D IR04_03015 chemotaxis protein CheY K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D IR04_14785 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D IR04_14790 C4-dicarboxylate ABC transporter K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D IR04_00635 chemotaxis protein CheY K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D IR04_17745 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D IR04_17195 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D IR04_04815 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_16160 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_12240 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_02840 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_17280 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_03360 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_13440 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_03770 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14460 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14505 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14645 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00035 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_05420 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04275 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00785 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_06010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04555 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_06310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_01200 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04665 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04715 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_15905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04800 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04820 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11745 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11785 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_07240 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11860 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12265 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_02820 chemotaxis protein K03776 aer; aerotaxis receptor
D IR04_04350 chemotaxis protein K03776 aer; aerotaxis receptor
D IR04_04825 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_04830 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_15440 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_15445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_12255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_04835 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_12230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_04840 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_15470 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_11875 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_12220 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_12235 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_10745 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_04805 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_15455 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_12250 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_13230 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_15165 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_04185 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_16165 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_03175 ABC transporter substrate-binding protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D IR04_03170 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D IR04_02170 chemotaxis protein CheY K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D IR04_10445 phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D IR04_10440 ATPase AAA K10912 luxO; two-component system, repressor protein LuxO
D IR04_07885 LuxR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D IR04_14805 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D IR04_14800 C4-dicarboxylate ABC transporter permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D IR04_14795 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D IR04_15805 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D IR04_15800 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D IR04_15795 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D IR04_18150 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IR04_07285 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IR04_07835 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D IR04_07845 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D IR04_12450 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D IR04_12445 hypothetical protein K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D IR04_12440 cytochrome C oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D IR04_12435 cytochrome Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D IR04_14385 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IR04_13070 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IR04_03800 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IR04_14380 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IR04_13065 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IR04_03805 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IR04_14375 membrane protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D IR04_12480 peptidase C39 K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D IR04_12475 hemolysin D K12532 rtxD; membrane fusion protein, RTX toxin transport system
D IR04_12470 peptidase C39 K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D IR04_17265 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D IR04_13045 membrane protein K12340 tolC; outer membrane protein
D IR04_10535 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D IR04_09945 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D IR04_09950 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D IR04_10735 histidine kinase K20976 hptB; histidine phosphotransfer protein HptB
D IR04_04790 chemotaxis protein CheY K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D IR04_04795 anti-anti-sigma regulatory factor K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D IR04_16175 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:vcf04148]
D IR04_04700 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D IR04_07835 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vcf02024]
D IR04_07765 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D IR04_03175 ABC transporter substrate-binding protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D IR04_03170 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D IR04_02175 CAI-1 autoinducer synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D IR04_02170 chemotaxis protein CheY K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D IR04_10445 phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D IR04_10440 ATPase AAA K10912 luxO; two-component system, repressor protein LuxO
D IR04_06700 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D IR04_07885 LuxR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D IR04_18310 transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D IR04_11190 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IR04_11185 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D IR04_08890 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IR04_12765 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IR04_04565 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IR04_04880 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D IR04_04885 XRE family transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D IR04_02215 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IR04_02925 histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D IR04_02920 transcriptional regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D IR04_03880 LuxR family transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D IR04_17500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_15065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_06170 rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_16810 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_18150 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IR04_06845 XRE family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D IR04_11615 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IR04_16490 ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D IR04_10785 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D IR04_10790 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D IR04_10795 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D IR04_04290 peptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D IR04_10800 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D IR04_10805 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D IR04_08050 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IR04_05790 cytochrome C K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IR04_04855 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IR04_08045 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IR04_05795 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IR04_04860 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IR04_08040 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IR04_05800 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IR04_04865 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IR04_08035 sugar ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IR04_05785 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IR04_08030 chemotaxis protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IR04_04945 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IR04_05675 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D IR04_06530 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IR04_08145 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IR04_17965 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IR04_09105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IR04_17060 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IR04_05630 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IR04_18325 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D IR04_07780 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae [PATH:vcf05111]
D IR04_07765 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D IR04_03170 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D IR04_03175 ABC transporter substrate-binding protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D IR04_02175 CAI-1 autoinducer synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D IR04_02170 chemotaxis protein CheY K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D IR04_10445 phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D IR04_10440 ATPase AAA K10912 luxO; two-component system, repressor protein LuxO
D IR04_06700 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D IR04_18310 transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D IR04_10585 LysR family transcriptional regulator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D IR04_04175 LuxR family transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D IR04_08750 Fis family transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D IR04_09940 phosphotyrosine protein phosphatase K20945 vpsU; tyrosine-protein phosphatase [EC:3.1.3.48]
D IR04_09945 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D IR04_09950 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D IR04_18315 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09955 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09975 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IR04_09960 glycosyl transferase family 1 K20921 vpsD; polysaccharide biosynthesis protein VpsD
D IR04_09965 sugar transporter K20946 vpsE; polysaccharide biosynthesis protein VpsE
D IR04_09970 membrane protein K20947 vpsF; polysaccharide biosynthesis protein VpsF
D IR04_09985 polysaccharide biosynthesis protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D IR04_09990 aspartate-semialdehyde dehydrogenase K20948 vpsJ; polysaccharide biosynthesis protein VpsJ
D IR04_09995 UDP-N-acetyl-D-mannosamine transferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D IR04_10025 capsular biosynthesis protein K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D IR04_10030 TetR family transcriptional regulator K20920 vpsM; polysaccharide biosynthesis protein VpsM
D IR04_10035 polysaccharide biosynthesis/export family protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D IR04_10040 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D IR04_10045 hypothetical protein K20949 vpsP; polysaccharide biosynthesis protein VpsP
D IR04_10050 teicoplanin resistance protein VanZ K20950 vpsQ; polysaccharide biosynthesis protein VpsQ
D IR04_18720 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C
D IR04_18715 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D IR04_18710 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D IR04_18705 general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D IR04_18700 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D IR04_18695 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D IR04_18690 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D IR04_18685 general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D IR04_18680 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D IR04_18675 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L
D IR04_18670 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D IR04_18665 general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N
D IR04_14600 hemolysin K20951 bap1; extracellular matrix protein
D IR04_10010 hemolysin K20952 rbmC; rugosity and biofilm structure modulator C
D IR04_10000 hypothetical protein K20953 rbmA; rugosity and biofilm structure modulator A
D IR04_09505 pilus assembly protein K10920 tcpP; toxin coregulated pilus biosynthesis protein P
D IR04_09510 transcriptional regulator K10919 tcpH; toxin coregulated pilus biosynthesis protein H
D IR04_10260 transcriptional regulator K10921 toxR; cholera toxin transcriptional activator
D IR04_10255 membrane protein K10922 toxS; transmembrane regulatory protein ToxS
D IR04_09565 AraC family transcriptional regulator K10923 tcpN; AraC family transcriptional regulator, TCP pilus virulence regulatory protein
D IR04_14435 porin K10940 ompT; outer membrane protein OmpT
D IR04_08110 membrane protein K08720 ompU; outer membrane protein OmpU
D IR04_09515 toxin coregulated pilin K10930 tcpA; toxin coregulated pilin
D IR04_09520 pilus assembly protein K10931 tcpB; toxin coregulated pilus biosynthesis protein B
D IR04_09530 pilus assembly protein K10932 tcpC; toxin coregulated pilus biosynthesis outer membrane protein C
D IR04_09540 pilus assembly protein K10933 tcpD; toxin coregulated pilus biosynthesis protein D
D IR04_09555 type II secretion system protein F K10934 tcpE; toxin coregulated pilus biosynthesis protein E
D IR04_09560 pilus assembly protein K10935 tcpF; toxin coregulated pilus biosynthesis protein F
D IR04_09500 chemotaxis protein K10961 tcpI; toxin coregulated pilus biosynthesis protein I
D IR04_09525 pilus assembly protein K10962 tcpQ; toxin coregulated pilus biosynthesis protein Q
D IR04_09535 pilus assembly protein K10963 tcpR; toxin coregulated pilus biosynthesis protein R
D IR04_09545 pilus assembly protein K10964 tcpS; toxin coregulated pilus biosynthesis protein S
D IR04_09550 pilus assembly protein K10965 tcpT; toxin coregulated pilus biosynthesis protein T
D IR04_09600 multidrug ABC transporter permease K10936 acfA; accessory colonization factor AcfA
D IR04_09575 chemotaxis protein K10937 acfB; accessory colonization factor AcfB
D IR04_09585 hypothetical protein K10938 acfC; accessory colonization factor AcfC
D IR04_09605 Accessory colonization factor AcfD K10939 acfD; accessory colonization factor AcfD
D IR04_12525 cholera enterotoxin subunit A2 K10928 ctxA; cholera enterotoxin subunit A [EC:2.4.2.36]
D IR04_12520 cholera enterotoxin subunit B K10929 ctxB; cholera enterotoxin subunit B
D IR04_07885 LuxR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D IR04_03775 hemagglutinin K08604 hap; vibriolysin [EC:3.4.24.25]
D IR04_17355 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D IR04_11380 sirA; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D IR04_07680 carbon storage regulator K03563 csrA; carbon storage regulator
D IR04_10165 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IR04_15205 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D IR04_05515 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D IR04_18150 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IR04_06355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D IR04_13175 diguanylate cyclase K20954 acgB; diguanylate cyclase [EC:2.7.7.65]
D IR04_10850 diguanylate cyclase K20955 cdgK; diguanylate cyclase [EC:2.7.7.65]
D IR04_00315 diguanylate cyclase K20956 cdgA; diguanylate cyclase [EC:2.7.7.65]
D IR04_10675 diguanylate cyclase K20957 cdgH; diguanylate cyclase [EC:2.7.7.65]
D IR04_16555 diguanylate cyclase K20958 cdgL; diguanylate cyclase [EC:2.7.7.65]
D IR04_12150 diguanylate cyclase K20959 cdgM; diguanylate cyclase [EC:2.7.7.65]
D IR04_04115 diguanylate cyclase K20960 K20960; diguanylate cyclase [EC:2.7.7.65]
D IR04_17360 diguanylate cyclase K20961 vpvC; diguanylate cyclase [EC:2.7.7.65]
D IR04_03415 diguanylate cyclase K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D IR04_13170 diguanylate phosphodiesterase K20963 acgA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D IR04_13480 diguanylate phosphodiesterase K13246 vieA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D IR04_05585 histidine kinase K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D IR04_07520 diguanylate phosphodiesterase K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D IR04_05555 diguanylate cyclase K20964 cdpA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D IR04_08220 c-di-GMP phosphodiesterase K20965 rocS; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D IR04_08925 diguanylate phosphodiesterase K20966 mbaA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D IR04_06995 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D IR04_07015 MSHA biogenesis protein MshA K10924 mshA; MSHA pilin protein MshA
D IR04_07010 MSHA biogenesis protein MshB K10925 mshB; MSHA pilin protein MshB
D IR04_07020 MSHA biogenesis protein MshC K10926 mshC; MSHA pilin protein MshC
D IR04_07025 MSHA biogenesis protein MshD K10927 mshD; MSHA pilin protein MshD
D IR04_15805 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D IR04_17745 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D IR04_15800 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D IR04_15795 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D IR04_15475 RNA polymerase sigma 70 K02405 fliA; RNA polymerase sigma factor FliA
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vcf02030]
D IR04_02840 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_17280 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_03360 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_13440 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_03770 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14460 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14505 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14645 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00035 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_05420 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04275 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00785 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_06010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04555 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_06310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_01200 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04665 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04715 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_15905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04800 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04820 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11745 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11785 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_07240 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11860 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12265 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_02820 chemotaxis protein K03776 aer; aerotaxis receptor
D IR04_04350 chemotaxis protein K03776 aer; aerotaxis receptor
D IR04_04145 malE; sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D IR04_00575 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D IR04_11915 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D IR04_04835 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_12230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_04825 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_04830 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_15440 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_15445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_12255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_04840 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_15470 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_11875 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_12220 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_12235 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_10745 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_10750 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D IR04_15465 protein phosphatase K03414 cheZ; chemotaxis protein CheZ
D IR04_06840 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D IR04_04805 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_15455 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_12250 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_13230 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_15165 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_04185 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_16165 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_04810 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D IR04_04815 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_16160 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_12240 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_15780 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IR04_15750 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D IR04_15745 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D IR04_09815 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D IR04_09820 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vcf02040]
D IR04_15790 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D IR04_15785 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D IR04_15780 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IR04_15775 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D IR04_15770 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D IR04_15765 flagellar biogenesis protein K02413 fliJ; flagellar protein FliJ
D IR04_15760 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D IR04_15755 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D IR04_05415 flagellar basal body-associated protein FliL-like protein K02415 fliL; flagellar protein FliL
D IR04_15750 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D IR04_15745 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D IR04_15740 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D IR04_15735 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D IR04_15730 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D IR04_15725 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D IR04_15490 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D IR04_15720 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D IR04_16170 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D IR04_16155 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D IR04_16150 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D IR04_16145 flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D IR04_16140 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D IR04_16135 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D IR04_16130 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D IR04_16125 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D IR04_16120 flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D IR04_16115 flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D IR04_16110 flgK; flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D IR04_16105 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D IR04_16190 membrane protein K24344 flgO; flagellar H-ring protein FlgO
D IR04_16185 hypothetical protein K09860 flgP; outer membrane protein FlgP
D IR04_16195 flagellar basal-body protein K24343 flgT; flagellar H-ring protein FlgT
D IR04_18090 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D IR04_10370 flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D IR04_15830 flagellin B K02406 fliC; flagellin
D IR04_15835 flagellin K02406 fliC; flagellin
D IR04_15840 flagellin K02406 fliC; flagellin
D IR04_16095 flagellin K02406 fliC; flagellin
D IR04_16100 flagellin K02406 fliC; flagellin
D IR04_15820 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D IR04_15810 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D IR04_09815 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D IR04_09820 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D IR04_16175 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D IR04_16180 molecular chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D IR04_07535 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D IR04_15805 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D IR04_17745 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D IR04_15795 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D IR04_15475 RNA polymerase sigma 70 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D IR04_17325 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D IR04_06920 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vcf01501]
D IR04_08110 membrane protein K08720 ompU; outer membrane protein OmpU
D IR04_16645 major facilitator transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D IR04_08875 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D IR04_10785 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D IR04_10790 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D IR04_10795 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D IR04_04290 peptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D IR04_10800 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D IR04_10805 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D IR04_05740 TetR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D IR04_05735 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D IR04_05730 transporter K18138 acrB; multidrug efflux pump
D IR04_17265 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D IR04_13045 membrane protein K12340 tolC; outer membrane protein
D IR04_18255 penicillin-sensitive transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D IR04_10100 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D IR04_17125 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:vcf01502]
D IR04_02420 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IR04_06820 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IR04_17115 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D IR04_17110 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IR04_17095 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vcf01503]
D IR04_04875 hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D IR04_13620 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D IR04_13625 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D IR04_13630 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein
D IR04_13635 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D IR04_13640 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D IR04_18515 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D IR04_18510 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D IR04_06685 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IR04_00250 peptidase K19236 ycfS; L,D-transpeptidase YcfS
D IR04_05085 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D IR04_16640 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D IR04_05735 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D IR04_05730 transporter K18138 acrB; multidrug efflux pump
D IR04_17265 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D IR04_13045 membrane protein K12340 tolC; outer membrane protein
D IR04_16380 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vcf01000]
C 01001 Protein kinases [BR:vcf01001]
D IR04_09455 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D IR04_10040 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D IR04_09020 phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IR04_11890 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D IR04_18515 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D IR04_04880 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D IR04_02210 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IR04_03040 chemotaxis protein CheY K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D IR04_16940 ATPase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D IR04_02880 histidine kinase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D IR04_02925 histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D IR04_17355 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D IR04_13485 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D IR04_11680 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D IR04_09345 ATPase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D IR04_13245 histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D IR04_08885 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D IR04_18790 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D IR04_03020 ATPase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D IR04_14785 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D IR04_12835 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D IR04_10755 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D IR04_04835 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_12230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_03170 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D IR04_02170 chemotaxis protein CheY K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D IR04_15800 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D IR04_08055 histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS
C 01009 Protein phosphatases and associated proteins [BR:vcf01009]
D IR04_18495 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IR04_10265 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D IR04_16830 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vcf01002]
D IR04_08835 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D IR04_17210 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D IR04_09570 methyltransferase K10966 tcpJ; toxin coregulated pilus biosynthesis protein J [EC:3.4.23.43 2.1.1.-]
D IR04_09235 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IR04_12910 peptidase P60 K13695 nlpC; probable lipoprotein NlpC
D IR04_10350 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IR04_16955 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IR04_16965 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IR04_07455 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IR04_10290 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D IR04_03875 hypothetical protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D IR04_16675 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D IR04_00250 peptidase K19236 ycfS; L,D-transpeptidase YcfS
D IR04_11640 peptidase K21470 ycbB; L,D-transpeptidase YcbB
D IR04_10705 CAAX protease K07052 K07052; CAAX protease family protein
D IR04_12705 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IR04_05885 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D IR04_03775 hemagglutinin K08604 hap; vibriolysin [EC:3.4.24.25]
D IR04_00990 protease K09607 ina; immune inhibitor A [EC:3.4.24.-]
D IR04_13470 peptidase M9 K01387 colA; microbial collagenase [EC:3.4.24.3]
D IR04_13760 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D IR04_07755 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D IR04_17610 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D IR04_09170 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D IR04_15870 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IR04_11995 peptidase M20 K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D IR04_00805 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D IR04_16530 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D IR04_00340 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D IR04_16445 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D IR04_05275 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D IR04_03545 aminopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D IR04_12305 peptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D IR04_08130 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IR04_10910 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D IR04_15920 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D IR04_16405 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D IR04_07805 peptidase K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D IR04_05675 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D IR04_00265 peptidase S9 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D IR04_01210 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IR04_10085 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IR04_03790 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D IR04_08105 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D IR04_14770 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D IR04_08410 ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D IR04_14760 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D IR04_12655 ATP-dependent protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D IR04_05395 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D IR04_08360 UV protection and mutation protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D IR04_17400 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IR04_12715 carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D IR04_00200 protease K08676 tri; tricorn protease [EC:3.4.21.-]
D IR04_15110 protease 4 K04773 sppA; protease IV [EC:3.4.21.-]
D IR04_10640 peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D IR04_05430 intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D IR04_01505 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D IR04_01775 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D IR04_18430 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D IR04_18100 peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D IR04_05905 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IR04_02345 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D IR04_09005 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D IR04_08210 protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D IR04_08215 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D IR04_17775 protein PmbA K03592 pmbA; PmbA protein
D IR04_07080 tldD; protease TldD K03568 tldD; TldD protein
D IR04_06715 protein HflC K04087 hflC; modulator of FtsH protease HflC
D IR04_06710 membrane protease HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vcf01003]
D IR04_13845 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D IR04_07960 peptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D IR04_18255 penicillin-sensitive transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D IR04_09960 glycosyl transferase family 1 K20921 vpsD; polysaccharide biosynthesis protein VpsD
D IR04_09985 polysaccharide biosynthesis protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D IR04_09995 UDP-N-acetyl-D-mannosamine transferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D IR04_11735 glucosyltransferase K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vcf01005]
D IR04_16380 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D IR04_16375 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D IR04_17070 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D IR04_16390 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D IR04_14415 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D IR04_14550 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D IR04_05995 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D IR04_05990 lauroyl acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D IR04_14500 exonuclease K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D IR04_06090 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D IR04_04875 hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D IR04_06060 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D IR04_15960 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D IR04_14540 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D IR04_17725 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D IR04_17720 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D IR04_06050 glycosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D IR04_06105 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D IR04_06110 polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D IR04_06055 glycosyl transferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D IR04_16295 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D IR04_09895 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D IR04_17270 heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D IR04_06125 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D IR04_06220 lipid carrier : UDP-N-acetylgalactosaminyltransferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vcf01011]
D IR04_17680 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IR04_06490 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IR04_17090 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D IR04_17105 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IR04_17120 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IR04_02420 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IR04_06820 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IR04_05680 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D IR04_01505 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D IR04_01775 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D IR04_17110 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IR04_17095 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IR04_07580 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IR04_17515 membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IR04_08820 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D IR04_18255 penicillin-sensitive transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D IR04_07960 peptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D IR04_10100 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D IR04_17125 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IR04_01210 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IR04_10085 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IR04_08105 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D IR04_03790 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D IR04_00250 peptidase K19236 ycfS; L,D-transpeptidase YcfS
D IR04_11640 peptidase K21470 ycbB; L,D-transpeptidase YcbB
D IR04_00340 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D IR04_08910 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D IR04_16695 murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D IR04_14930 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D IR04_07265 murein transglycosylase K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D IR04_16330 murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D IR04_09705 murein transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D IR04_15225 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D IR04_10090 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D IR04_06685 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IR04_17185 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D IR04_00255 membrane protein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:vcf01004]
D IR04_15250 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IR04_03245 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IR04_15255 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IR04_15675 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D IR04_15235 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IR04_15245 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IR04_12660 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D IR04_16385 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D IR04_03410 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D IR04_03405 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D IR04_13725 acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D IR04_06385 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IR04_11980 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D IR04_03615 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D IR04_17500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_15065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_06170 rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_16810 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_05400 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D IR04_15260 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D IR04_07565 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D IR04_17675 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:vcf01008]
D IR04_09255 Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D IR04_09300 vibriobactin synthase D K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D IR04_09260 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D IR04_13110 enterobactin synthase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D IR04_16200 peptide synthetase K12237 vibF; nonribosomal peptide synthetase VibF
D IR04_09275 vibriobactin synthetase K04778 vibH; vibriobactin synthetase
C 01006 Prenyltransferases [BR:vcf01006]
D IR04_09805 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D IR04_07145 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D IR04_16420 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D IR04_06695 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D IR04_18420 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D IR04_05405 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:vcf01007]
D IR04_16225 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IR04_10315 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D IR04_07935 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D IR04_08100 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IR04_07340 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IR04_18195 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D IR04_14405 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IR04_15510 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IR04_10505 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IR04_08830 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IR04_17620 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IR04_10125 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IR04_08745 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IR04_11150 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IR04_11780 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D IR04_09195 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IR04_05020 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D IR04_05015 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D IR04_10875 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IR04_09740 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IR04_01290 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IR04_09215 metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IR04_07670 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IR04_11425 phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IR04_11430 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IR04_02125 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D IR04_05010 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D IR04_15030 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IR04_11760 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D IR04_10995 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IR04_03865 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D IR04_10890 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D IR04_18170 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IR04_13350 aminotransferase class III K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D IR04_03595 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D IR04_10880 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D IR04_08070 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D IR04_05060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IR04_02565 2-aminoethylphosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D IR04_06930 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IR04_11115 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IR04_06145 perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vcf00194]
D IR04_18910 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D IR04_18915 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D IR04_18920 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D IR04_18925 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D IR04_18930 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D IR04_18935 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D IR04_18940 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D IR04_18945 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D IR04_18950 ATP F0F1 synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vcf03000]
D IR04_00885 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IR04_09565 AraC family transcriptional regulator K10923 tcpN; AraC family transcriptional regulator, TCP pilus virulence regulatory protein
D IR04_15535 AraC family transcriptional regulator K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D IR04_04480 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D IR04_09835 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D IR04_05715 transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D IR04_13745 transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D IR04_13115 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D IR04_08805 nhaR; transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D IR04_09075 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D IR04_18260 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D IR04_07435 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D IR04_17505 leuO; transcriptional regulator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D IR04_10585 LysR family transcriptional regulator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D IR04_14695 cysB; CysB family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D IR04_03820 transcriptional regulator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D IR04_04490 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D IR04_12995 DeoR faimly transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D IR04_04120 transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D IR04_01105 transcriptional regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D IR04_13015 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IR04_00585 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IR04_16790 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IR04_18440 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D IR04_02155 transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D IR04_02800 sucrose operon repressor ScrR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D IR04_09900 treR; trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D IR04_13820 transcriptional regulator K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D IR04_06350 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D IR04_11345 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D IR04_14655 GntR family transcriptional regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D IR04_17155 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D IR04_05740 TetR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D IR04_06000 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D IR04_07885 LuxR family transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D IR04_13925 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D IR04_02485 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D IR04_05655 transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D IR04_05295 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D IR04_04710 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IR04_14680 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IR04_13780 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IR04_10650 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D IR04_03880 LuxR family transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D IR04_06950 LuxR family transcriptional regulator K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D IR04_04175 LuxR family transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D IR04_00045 transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D IR04_04430 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D IR04_10210 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D IR04_06290 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D IR04_00360 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D IR04_00240 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D IR04_15660 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D IR04_06845 XRE family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D IR04_18150 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IR04_12410 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D IR04_09130 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D IR04_10680 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D IR04_08810 transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D IR04_14990 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D IR04_18310 transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D IR04_05955 XRE family transcriptional regulator K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D IR04_11065 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D IR04_06495 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D IR04_06355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D IR04_08915 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D IR04_02445 transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator
D IR04_15805 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D IR04_08750 Fis family transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D IR04_14265 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D IR04_00520 ATPase AAA K11908 vasH; sigma-54 dependent transcriptional regulator
D IR04_00815 transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D IR04_03965 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D IR04_01910 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator
D IR04_18460 Met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D IR04_04735 pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IR04_16625 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D IR04_18955 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IR04_04925 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IR04_10285 transcriptional regulator K05785 rfaH; transcriptional antiterminator RfaH
D IR04_07125 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D IR04_10300 transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D IR04_15170 transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene
D IR04_04620 mannitol operon repressor K02562 mtlR; mannitol operon repressor
D IR04_11835 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D IR04_06295 XRE family transcriptional regulator K03765 cadC; transcriptional activator of cad operon
D IR04_15895 glycine cleavage system protein R K03567 gcvR; glycine cleavage system transcriptional repressor
D IR04_13615 ATPase AAA K03974 pspF; psp operon transcriptional activator
D IR04_13600 phage-shock protein K03973 pspC; phage shock protein C
D IR04_02580 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D IR04_14230 DNA-binding protein K07733 alpA; prophage regulatory protein
D IR04_14105 transcriptional regulator K07733 alpA; prophage regulatory protein
D IR04_07350 hypothetical protein K07735 algH; putative transcriptional regulator
D IR04_07940 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D IR04_16495 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D IR04_16510 XRE family transcriptional regulator K11926 crl; sigma factor-binding protein Crl
C 03021 Transcription machinery [BR:vcf03021]
D IR04_17940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IR04_06560 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IR04_06565 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IR04_18595 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D IR04_07535 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D IR04_10555 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IR04_16655 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IR04_17425 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IR04_05645 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D IR04_17745 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D IR04_15475 RNA polymerase sigma 70 K02405 fliA; RNA polymerase sigma factor FliA
D IR04_17635 ATP-dependent helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D IR04_08165 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D IR04_16470 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D IR04_06535 nusG; transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D IR04_07850 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D IR04_07855 peptidase K03600 sspB; stringent starvation protein B
D IR04_17420 anti-sigma E factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D IR04_17415 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D IR04_17410 sigma-E factor regulatory protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D IR04_07940 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D IR04_08115 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D IR04_18625 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D IR04_06425 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D IR04_04160 transcriptional regulator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:vcf03019]
D IR04_15290 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D IR04_07065 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D IR04_17395 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IR04_18080 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D IR04_06625 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D IR04_06415 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D IR04_03340 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D IR04_00910 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D IR04_12275 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D IR04_03505 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IR04_05915 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IR04_17325 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IR04_08190 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D IR04_06425 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D IR04_18495 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IR04_09655 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D IR04_18375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_03575 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_06700 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D IR04_09035 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IR04_09060 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D IR04_07930 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D IR04_08775 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D IR04_07680 carbon storage regulator K03563 csrA; carbon storage regulator
D IR04_06960 diguanylate phosphodiesterase K18765 csrD; RNase E specificity factor CsrD
D IR04_18415 regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D IR04_16925 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A
D IR04_07095 regulator K09893 rraB; regulator of ribonuclease activity B
D IR04_17760 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D IR04_12170 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D IR04_07955 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vcf03011]
D IR04_14735 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D IR04_16440 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D IR04_18035 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D IR04_17945 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D IR04_17980 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D IR04_06790 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D IR04_06765 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D IR04_17995 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D IR04_07830 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D IR04_18070 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D IR04_17950 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D IR04_06760 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D IR04_17955 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D IR04_18000 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D IR04_08185 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D IR04_07785 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D IR04_18020 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D IR04_06800 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D IR04_18045 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D IR04_08815 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D IR04_07550 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D IR04_06545 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D IR04_18050 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D IR04_18065 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D IR04_18060 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D IR04_18005 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D IR04_17990 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D IR04_06805 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D IR04_06550 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D IR04_06540 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D IR04_06555 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D IR04_07825 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D IR04_18015 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D IR04_17970 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D IR04_18030 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D IR04_17935 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D IR04_17985 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D IR04_07800 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D IR04_01305 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D IR04_07150 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D IR04_18040 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D IR04_18055 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D IR04_18010 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D IR04_07155 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D IR04_06020 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D IR04_18025 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D IR04_17975 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D IR04_09750 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D IR04_18450 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D IR04_15265 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D IR04_06025 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D IR04_04955 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D IR04_01300 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D IR04_09755 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IR04_17960 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IR04_13420 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D IR04_17550 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_05225 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_06905 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_08980 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_05705 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_18815 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_17560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_06470 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_18835 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_18830 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_05690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_18860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_06885 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_06450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_17580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_08965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_05210 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_18820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_06465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_05220 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_05700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_06900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_17565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_08975 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_18840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:vcf03009]
D IR04_17395 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IR04_06625 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D IR04_17390 GTPase Era K03595 era; GTPase
D IR04_07160 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D IR04_07940 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D IR04_08165 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D IR04_16470 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D IR04_06535 nusG; transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D IR04_13395 16S rRNA pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D IR04_07190 ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D IR04_05135 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D IR04_08060 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D IR04_05625 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D IR04_07360 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D IR04_12745 yebU; RNA methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D IR04_18965 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D IR04_17135 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D IR04_07880 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D IR04_05305 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D IR04_15150 rrmA; 23S rRNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D IR04_08125 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D IR04_13295 23S rRNA methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D IR04_16630 50S rRNA methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D IR04_10105 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D IR04_12045 23S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D IR04_05880 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D IR04_12680 rlmL; 23S rRNA methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D IR04_09180 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D IR04_17350 rumA; 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D IR04_04075 rumB; 23S rRNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D IR04_17630 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IR04_13560 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IR04_00455 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IR04_11210 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D IR04_15280 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D IR04_08950 rluD; 23S rRNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D IR04_11025 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D IR04_16265 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D IR04_08240 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D IR04_11840 ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D IR04_16540 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D IR04_14605 ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D IR04_07790 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D IR04_18180 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D IR04_06365 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D IR04_15710 50S ribosomal protein L30 K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D IR04_15290 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D IR04_07065 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D IR04_07345 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D IR04_17905 DEAD/DEAH box helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D IR04_03505 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IR04_08725 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D IR04_06620 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IR04_09210 GTP-binding protein Der K03977 engA; GTPase
D IR04_02195 GTPase K14540 rbgA; ribosome biogenesis GTPase A
D IR04_06705 GTPase HflX K03665 hflX; GTPase
D IR04_05180 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IR04_10730 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IR04_18600 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D IR04_08175 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D IR04_08160 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D IR04_02465 hypothetical protein K14761 rlbA; ribosome-associated protein
D IR04_10110 hypothetical protein K09710 ybeB; ribosome-associated protein
D IR04_10145 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor
D IR04_08120 RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D IR04_00040 hypothetical protein K14762 yibL; ribosome-associated protein
D IR04_17780 hypothetical protein K09889 yjgA; ribosome-associated protein
D IR04_17750 ribosome hibernation promoting factor HPF K05808 hpf; ribosome hibernation promoting factor
D IR04_08940 cold-shock protein K05809 raiA; ribosome-associated inhibitor A
D IR04_16010 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
D IR04_15270 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vcf03016]
D IR04_17320 cca; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D IR04_16225 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IR04_09740 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IR04_08830 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IR04_10125 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IR04_10505 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IR04_10315 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D IR04_15510 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IR04_08745 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IR04_11150 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IR04_09215 metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IR04_07670 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IR04_11780 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D IR04_01290 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IR04_10875 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IR04_14405 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IR04_17620 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IR04_09195 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IR04_11425 phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IR04_11430 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IR04_08100 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IR04_07340 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IR04_18195 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D IR04_18750 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D IR04_14640 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D IR04_07280 trmB; tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D IR04_09745 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D IR04_10325 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D IR04_08180 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D IR04_07600 pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D IR04_09135 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IR04_05180 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IR04_10730 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IR04_06695 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D IR04_04940 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D IR04_18970 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D IR04_18660 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D IR04_04950 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D IR04_18975 bacterial RNase P K01978 rnpB; M1 RNA
D IR04_10360 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D IR04_03510 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D IR04_15060 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D IR04_08905 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D IR04_05020 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D IR04_05015 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D IR04_07935 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D IR04_15950 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D IR04_09695 adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D IR04_06850 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D IR04_06360 hypothetical protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D IR04_10855 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D IR04_10155 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D IR04_11140 tRNA methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D IR04_11135 tRNA methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D IR04_13800 SAM-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D IR04_05665 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D IR04_07795 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D IR04_09125 tRNA (cytidine/uridine-2'-O-)-methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D IR04_02700 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D IR04_18525 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D IR04_08730 SAM-dependent methlyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D IR04_04680 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D IR04_09405 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D IR04_09795 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D IR04_17630 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IR04_13560 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IR04_00455 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IR04_10965 mnmA; tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D IR04_12400 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D IR04_05035 sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D IR04_15915 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D IR04_06755 sulfur relay protein TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D IR04_06750 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D IR04_06745 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D IR04_12055 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D IR04_09145 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D IR04_17445 tRNA-modifying protein K06980 ygfZ; tRNA-modifying protein YgfZ
D IR04_14710 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D IR04_15680 mnmC; FAD-dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D IR04_09095 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D IR04_12100 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D IR04_11790 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D IR04_12095 pyrroloquinoline quinone biosynthesis protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D IR04_09865 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D IR04_06675 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D IR04_09100 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D IR04_09825 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D IR04_16355 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D IR04_04915 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D IR04_15085 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D IR04_07555 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D IR04_06680 ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D IR04_16690 sulfur acceptor protein CsdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D IR04_18080 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D IR04_08190 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vcf03012]
D IR04_02410 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D IR04_08170 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D IR04_01295 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D IR04_18125 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D IR04_16435 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D IR04_06525 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IR04_06775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IR04_06770 fusA; elongation factor G K02355 fusA; elongation factor G
D IR04_16815 elongation factor G K02355 fusA; elongation factor G
D IR04_15980 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D IR04_16425 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D IR04_15975 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D IR04_16005 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D IR04_13890 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D IR04_18360 elongation factor P K02356 efp; elongation factor P
D IR04_11360 elongation factor P K02356 efp; elongation factor P
D IR04_18335 poxB regulator PoxA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D IR04_18365 lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D IR04_15695 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D IR04_08740 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D IR04_08720 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D IR04_00830 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:vcf03110]
D IR04_11045 clpA; Clp protease ClpX K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D IR04_08960 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D IR04_14765 clpX; Clp protease ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D IR04_18425 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D IR04_10265 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D IR04_09655 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D IR04_09155 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D IR04_12180 chaperone K04046 yegD; hypothetical chaperone protein
D IR04_18375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_03575 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_09660 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IR04_07210 molecular chaperone DnaJ K05801 djlA; DnaJ like chaperone protein
D IR04_09150 cobalamin 5'-phosphate synthase K04082 hscB; molecular chaperone HscB
D IR04_18730 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D IR04_09650 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D IR04_05005 heat-shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D IR04_18725 ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D IR04_18380 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D IR04_03570 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D IR04_08130 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IR04_18945 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D IR04_18325 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D IR04_18505 cpxP; periplasmic repressor CpxP K06006 cpxP; periplasmic protein CpxP/Spy
D IR04_00165 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D IR04_13815 molecular chaperone TorD K03533 torD; TorA specific chaperone
D IR04_05675 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D IR04_00970 hemolysin K10948 hlyA; hemolysin
D IR04_08015 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IR04_16240 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IR04_16640 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D IR04_14410 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D IR04_14750 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D IR04_06735 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D IR04_17925 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D IR04_08840 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D IR04_18105 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D IR04_04180 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D IR04_07200 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D IR04_06420 thioredoxin K03671 TXN; thioredoxin
D IR04_03250 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D IR04_10225 thioredoxin K05838 ybbN; putative thioredoxin
D IR04_11055 glutaredoxin K03674 grxA; glutaredoxin 1
D IR04_04370 glutaredoxin K03675 grxB; glutaredoxin 2
D IR04_15365 glutaredoxin K07390 grxD; monothiol glutaredoxin
D IR04_05085 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D IR04_14665 dihydrolipoamide acyltransferase K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D IR04_08495 disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D IR04_17170 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D IR04_18560 thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D IR04_15400 thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:vcf04131]
D IR04_09175 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IR04_05025 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D IR04_03670 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IR04_15135 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IR04_03035 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_15175 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_07445 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_10265 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:vcf04121]
C 03051 Proteasome [BR:vcf03051]
D IR04_10265 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vcf03032]
D IR04_16315 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D IR04_00885 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IR04_06265 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D IR04_14755 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D IR04_11435 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D IR04_14730 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D IR04_04975 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D IR04_06815 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D IR04_07540 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D IR04_08565 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_06955 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_16365 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IR04_04980 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IR04_17615 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D IR04_10115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IR04_15215 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IR04_08370 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_06390 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_11750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_16310 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_10610 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IR04_08235 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D IR04_16370 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D IR04_05455 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IR04_10195 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IR04_18210 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D IR04_15620 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication
D IR04_11590 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IR04_04990 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IR04_17235 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D IR04_17240 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D IR04_13860 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D IR04_15360 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vcf03036]
D IR04_00885 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IR04_17395 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IR04_10975 transcriptional regulator K03746 hns; DNA-binding protein H-NS
D IR04_06265 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D IR04_14755 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D IR04_11435 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D IR04_14730 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D IR04_04975 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D IR04_07865 DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein
D IR04_05590 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein
D IR04_06355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D IR04_06700 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D IR04_07435 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D IR04_04710 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IR04_14680 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IR04_13780 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IR04_15330 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D IR04_13785 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB
D IR04_13790 condesin subunit E K03804 mukE; chromosome partition protein MukE
D IR04_17080 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D IR04_07585 cell division protein FtsB K05589 ftsB; cell division protein FtsB
D IR04_05635 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IR04_17125 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IR04_14670 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D IR04_17130 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D IR04_17085 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D IR04_17100 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D IR04_05640 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IR04_17075 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IR04_10190 cell division protein ZipA K03528 zipA; cell division protein ZipA
D IR04_17470 Z-ring-associated protein K09888 zapA; cell division protein ZapA
D IR04_18485 septal ring assembly protein ZapB K09892 zapB; cell division protein ZapB
D IR04_12685 cell division protein ZapC K18657 zapC; cell division protein ZapC
D IR04_17220 hypothetical protein K18778 zapD; cell division protein ZapD
D IR04_07820 ATPase K06916 zapE; cell division protein ZapE
D IR04_06685 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IR04_05735 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D IR04_14940 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D IR04_14945 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D IR04_14950 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D IR04_11270 helicase K13053 sulA; cell division inhibitor SulA
D IR04_06000 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D IR04_15620 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication
D IR04_07045 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D IR04_07050 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D IR04_07055 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D IR04_10095 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D IR04_18960 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D IR04_15450 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D IR04_04930 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D IR04_18955 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IR04_04925 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IR04_17235 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D IR04_17240 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D IR04_18970 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D IR04_18965 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D IR04_05545 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D IR04_17175 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D IR04_10510 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D IR04_05460 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vcf03400]
D IR04_04475 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D IR04_00245 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D IR04_12205 FAD-binding protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D IR04_16890 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D IR04_07275 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D IR04_10385 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D IR04_17055 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IR04_00420 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IR04_01405 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IR04_03530 deoxyribodipyrimidine photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D IR04_04480 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D IR04_13580 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D IR04_06035 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D IR04_14465 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D IR04_16895 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D IR04_17165 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D IR04_10195 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IR04_05455 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IR04_06940 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D IR04_10430 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D IR04_11385 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D IR04_05890 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IR04_06560 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IR04_06565 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IR04_17940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IR04_18595 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D IR04_14590 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D IR04_07625 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D IR04_06690 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D IR04_08765 hypothetical protein K03573 mutH; DNA mismatch repair protein MutH
D IR04_11480 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D IR04_09225 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D IR04_09810 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D IR04_16365 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IR04_04980 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IR04_17615 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D IR04_10115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IR04_15215 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IR04_08370 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_06390 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_11750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_16310 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IR04_10610 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IR04_08235 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D IR04_08565 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_06955 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_18210 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D IR04_16725 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D IR04_16730 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D IR04_16720 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D IR04_07660 recA; recombinase A K03553 recA; recombination protein RecA
D IR04_14395 ruvA; ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D IR04_14400 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D IR04_18445 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D IR04_06795 primosomal replication protein N K02686 priB; primosomal replication protein N
D IR04_14450 prepilin peptidase K04067 priC; primosomal replication protein N''
D IR04_02165 nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D IR04_02160 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D IR04_16820 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D IR04_04985 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D IR04_18605 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IR04_17385 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D IR04_10620 recR; recombination protein RecR K06187 recR; recombination protein RecR
D IR04_09640 recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D IR04_09010 recombination associated protein K03554 rdgC; recombination associated protein RdgC
D IR04_13400 carboxylate--amine ligase K19789 radD; DNA repair protein RadD
D IR04_11590 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IR04_04990 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IR04_13860 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D IR04_06265 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D IR04_14755 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D IR04_06355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D IR04_11435 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D IR04_14730 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D IR04_05915 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IR04_10975 transcriptional regulator K03746 hns; DNA-binding protein H-NS
D IR04_16580 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D IR04_08360 UV protection and mutation protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D IR04_05395 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D IR04_11375 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D IR04_07665 recombinase RecX K03565 recX; regulatory protein
D IR04_05745 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D IR04_03075 DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D IR04_15090 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D IR04_14440 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D IR04_11580 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IR04_11575 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vcf03029]
D IR04_08170 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D IR04_01295 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D IR04_16435 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D IR04_06525 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IR04_06775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IR04_06770 fusA; elongation factor G K02355 fusA; elongation factor G
D IR04_16815 elongation factor G K02355 fusA; elongation factor G
D IR04_17390 GTPase Era K03595 era; GTPase
D IR04_08100 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IR04_07340 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IR04_10125 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IR04_11150 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IR04_15510 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IR04_08565 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_06955 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IR04_16400 outer membrane protein assembly protein YaeT K07277 SAM50; outer membrane protein insertion porin family
D IR04_09655 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D IR04_09650 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D IR04_18375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_03575 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_18380 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D IR04_03570 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D IR04_09660 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IR04_09135 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IR04_09150 cobalamin 5'-phosphate synthase K04082 hscB; molecular chaperone HscB
D IR04_15365 glutaredoxin K07390 grxD; monothiol glutaredoxin
D IR04_10510 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D IR04_04945 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IR04_00170 photosynthetic protein synthase I K07152 SCO1; protein SCO1
D IR04_10265 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vcf02000]
D IR04_14555 lipid transporter ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D IR04_12480 peptidase C39 K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D IR04_12470 peptidase C39 K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D IR04_04385 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D IR04_05930 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D IR04_04780 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D IR04_11215 amino acid ABC transporter permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D IR04_11220 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D IR04_12670 ABC transporter ATPase K15738 uup; ABC transport system ATP-binding/permease protein
D IR04_07635 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D IR04_07640 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D IR04_07645 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D IR04_07650 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D IR04_03120 modA; molybdate transporter K02020 modA; molybdate transport system substrate-binding protein
D IR04_03115 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein
D IR04_03110 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D IR04_12845 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D IR04_12850 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D IR04_12855 ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D IR04_07990 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D IR04_02935 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D IR04_02560 phosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D IR04_07995 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D IR04_02940 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D IR04_02550 membrane protein K02011 afuB; iron(III) transport system permease protein
D IR04_08000 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D IR04_02945 fbpC; ferric transporter ATP-binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D IR04_02555 phosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D IR04_17795 tbpA; thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D IR04_17790 thiP; thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein
D IR04_17785 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D IR04_08930 Norspermidine sensor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IR04_04920 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IR04_12360 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IR04_12365 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IR04_12370 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D IR04_12375 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D IR04_12380 potA; putrescine/spermidine ABC transporter ATPase K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D IR04_13540 hypothetical protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D IR04_13545 thiamine ABC transporter permease K05778 ynjC; putative thiamine transport system permease protein
D IR04_13550 ABC transporter ATP-binding protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D IR04_04145 malE; sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D IR04_04140 malF; maltose transporter membrane protein K10109 malF; maltose/maltodextrin transport system permease protein
D IR04_04135 malG; maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D IR04_04150 maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IR04_04550 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IR04_11915 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D IR04_11925 mglC; beta-methylgalactoside transporter permease K10541 mglC; methyl-galactoside transport system permease protein
D IR04_11920 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D IR04_00575 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D IR04_00570 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D IR04_00565 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D IR04_12975 glycerol 3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D IR04_12980 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D IR04_12985 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D IR04_12990 sugar ABC transporter ATPase K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D IR04_17700 toluene ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D IR04_17705 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D IR04_17710 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D IR04_17695 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D IR04_17690 NTP-binding protein K07122 mlaB; phospholipid transport system transporter-binding protein
D IR04_09025 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_03520 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_00295 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D IR04_09040 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D IR04_00300 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D IR04_09045 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D IR04_00305 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D IR04_09050 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IR04_00310 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IR04_03295 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D IR04_03285 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D IR04_03290 ABC transporter K09999 artQ; arginine transport system permease protein
D IR04_03300 arginine ABC transporter ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D IR04_12080 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D IR04_12075 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D IR04_12070 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D IR04_14480 nickel transporter K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D IR04_14470 amino acid ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D IR04_14475 ABC transporter K10024 aotQ; arginine/ornithine transport system permease protein
D IR04_14485 amino acid transporter K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D IR04_09880 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D IR04_09885 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D IR04_09890 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D IR04_10835 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D IR04_10840 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D IR04_10845 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D IR04_04970 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D IR04_04965 ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D IR04_04960 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D IR04_04295 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IR04_18190 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IR04_13200 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IR04_04580 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IR04_02470 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IR04_04310 ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IR04_04575 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IR04_04585 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IR04_04570 glnQ; glutamine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D IR04_10785 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D IR04_10790 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D IR04_10795 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D IR04_04290 peptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D IR04_10800 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D IR04_10805 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D IR04_13620 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D IR04_13625 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D IR04_13630 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein
D IR04_13635 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D IR04_13640 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D IR04_08050 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IR04_05790 cytochrome C K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IR04_04855 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IR04_08045 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IR04_05795 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IR04_04860 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IR04_08040 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IR04_05800 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IR04_04865 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IR04_08035 sugar ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IR04_05785 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IR04_08030 chemotaxis protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IR04_02510 antibiotic ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D IR04_02505 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein
D IR04_02500 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D IR04_02495 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D IR04_05945 iron-hydroxamate ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D IR04_05950 Fe3+-siderophore ABC transporter permease K23228 fhuB; ferric hydroxamate transport system permease protein
D IR04_05940 ABC transporter K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D IR04_04005 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D IR04_04010 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D IR04_04015 hemin ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D IR04_09280 antibiotic ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D IR04_09285 ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D IR04_09290 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D IR04_09295 fecE; iron-dicitrate transporter ATP-binding subunit K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D IR04_01005 enterochelin ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D IR04_01015 ABC transporter permease K25283 yclO; iron-siderophore transport system permease protein
D IR04_01010 iron ABC transporter K25284 yclN; iron-siderophore transport system permease protein
D IR04_01020 iron ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D IR04_16990 Vitamin B12-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D IR04_11525 Vitamin B12 import system permease BtuC K06073 btuC; vitamin B12 transport system permease protein
D IR04_11530 iron ABC transporter K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D IR04_15540 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D IR04_15550 membrane protein K09816 znuB; zinc transport system permease protein
D IR04_15545 znuC; zinc ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D IR04_06155 sugar transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D IR04_06160 sugar ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D IR04_17605 lipopolysaccharide ABC transporter permease K07091 lptF; lipopolysaccharide export system permease protein
D IR04_17600 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D IR04_17740 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D IR04_14570 outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D IR04_14580 transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D IR04_14575 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D IR04_15415 heme transporter CcmD K02196 ccmD; heme exporter protein D
D IR04_15420 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D IR04_15425 heme ABC transporter permease K02194 ccmB; heme exporter protein B
D IR04_15430 cytochrome C biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D IR04_05640 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IR04_05635 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IR04_07910 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IR04_13265 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IR04_13270 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D IR04_13520 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D IR04_13515 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IR04_07905 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IR04_13050 ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D IR04_13055 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D IR04_03720 permease K02004 ABC.CD.P; putative ABC transport system permease protein
D IR04_03395 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D IR04_13365 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D IR04_17860 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D IR04_13060 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IR04_03725 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IR04_03400 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IR04_13370 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IR04_17855 methionine ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IR04_00105 Anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D IR04_06610 dihydroorotate dehydrogenase K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D IR04_11865 dihydroorotate dehydrogenase K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D IR04_12930 multidrug transporter MatE K26939 norM; MATE family, multidrug efflux pump
D IR04_18410 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D IR04_05385 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D IR04_13375 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D IR04_04355 Fis family transcriptional regulator K26937 dinF; MATE family, multidrug efflux pump
D IR04_08205 vmrA; multidrug transporter K26937 dinF; MATE family, multidrug efflux pump
D IR04_11605 MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D IR04_02325 oxalate:formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D IR04_06400 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D IR04_00615 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D IR04_03030 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D IR04_02930 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D IR04_10695 MFS transporter permease K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D IR04_16645 major facilitator transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D IR04_08310 MFS transporter K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D IR04_13390 multidrug transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D IR04_05285 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D IR04_00950 major facilitator transporter K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D IR04_12295 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D IR04_13315 MFS transporter permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D IR04_03255 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D IR04_10170 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D IR04_08780 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D IR04_10175 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr
D IR04_17765 phosphate ABC transporter permease K08485 ptsO; phosphocarrier protein NPr
D IR04_02150 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D IR04_10165 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IR04_15205 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D IR04_10310 PTS N-acetylmuramic acid transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D IR04_02795 PTS system trehalose-specific transporter subunits IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D IR04_09905 PTS system trehalose(maltose)-specific transporter subunits IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D IR04_05965 murP; PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D IR04_14275 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D IR04_02140 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IR04_14290 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D IR04_14280 PTS fructose transporter subunit IIC K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D IR04_14285 PTS fructose transporter subunit IIA K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D IR04_04610 PTS system mannitol-specific transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D IR04_11715 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D IR04_11705 cytochrome C biogenesis protein CcmE K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D IR04_11710 PTS sugar transporter K02761 celB; cellobiose PTS system EIIC component
D IR04_01095 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D IR04_01100 PTS ascorbate-specific subunit IIBC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D IR04_14295 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D IR04_17755 PTS sugar transporter K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D IR04_03220 glycerol uptake facilitator GlpF K02440 glpF; glycerol uptake facilitator
D IR04_00870 potassium channel protein K10716 kch; voltage-gated potassium channel
D IR04_07985 ammonium transporter K03320 amt; ammonium transporter, Amt family
D IR04_07850 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D IR04_00760 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D IR04_00765 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D IR04_12060 membrane protein K19416 yccA; modulator of FtsH protease
D IR04_13695 formate transporter K06212 focA; formate transporter
D IR04_02600 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D IR04_13945 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel
D IR04_07425 mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D IR04_06230 miniconductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel
D IR04_17770 magnesium transporter K06213 mgtE; magnesium transporter
D IR04_13490 magnesium transporter K06213 mgtE; magnesium transporter
D IR04_03565 magnesium transporter MgtE K06213 mgtE; magnesium transporter
D IR04_09815 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D IR04_09820 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D IR04_18090 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D IR04_10370 flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D IR04_03995 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D IR04_12960 TolQ K03561 exbB; biopolymer transport protein ExbB
D IR04_12965 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB
D IR04_12955 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D IR04_14360 colicin uptake protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D IR04_14355 biopolymer transporter TolR K03560 tolR; biopolymer transport protein TolR
D IR04_16775 magnesium transporter K16074 zntB; zinc transporter
D IR04_05240 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D IR04_03655 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IR04_06260 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IR04_07770 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IR04_08110 membrane protein K08720 ompU; outer membrane protein OmpU
D IR04_14435 porin K10940 ompT; outer membrane protein OmpT
D IR04_04525 maltoporin K02024 lamB; maltoporin
D IR04_16220 membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D IR04_03760 long-chain fatty acid outer membrane transporter K06076 fadL; long-chain fatty acid transport protein
D IR04_10540 aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein
D IR04_10545 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein
D IR04_16665 membrane protein K05517 tsx; nucleoside-specific channel-forming protein
D IR04_05670 ligand-gated channel K16092 btuB; vitamin B12 transporter
D IR04_07395 outer membrane siderophore receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D IR04_01030 ligand-gated channel K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D IR04_02440 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D IR04_02660 ligand-gated channel K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D IR04_06325 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D IR04_05935 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D IR04_00270 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D IR04_16210 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D IR04_17265 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D IR04_13045 membrane protein K12340 tolC; outer membrane protein
D IR04_13330 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D IR04_10035 polysaccharide biosynthesis/export family protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D IR04_16400 outer membrane protein assembly protein YaeT K07277 SAM50; outer membrane protein insertion porin family
D IR04_09205 membrane biogenesis protein K17713 bamB; outer membrane protein assembly factor BamB
D IR04_15885 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC
D IR04_08945 membrane protein K05807 bamD; outer membrane protein assembly factor BamD
D IR04_09635 membrane protein K06186 bamE; outer membrane protein assembly factor BamE
D IR04_17830 membrane protein K07278 tamA; translocation and assembly module TamA
D IR04_17825 hypothetical protein K09800 tamB; translocation and assembly module TamB
D IR04_17735 ABC transporter substrate-binding protein K09774 lptA; lipopolysaccharide export system protein LptA
D IR04_17730 lipopolysaccharide assembly protein K11719 lptC; lipopolysaccharide export system protein LptC
D IR04_07205 LPS biosynthesis protein K04744 lptD; LPS-assembly protein
D IR04_10120 luciferase K03643 lptE; LPS-assembly lipoprotein
D IR04_10030 TetR family transcriptional regulator K20920 vpsM; polysaccharide biosynthesis protein VpsM
D IR04_00970 hemolysin K10948 hlyA; hemolysin
D IR04_10140 magnesium transporter K06189 corC; hemolysin (HlyC) family protein
D IR04_15645 Holin-like protein CidA K06518 cidA; holin-like protein
D IR04_11475 membrane protein K06518 cidA; holin-like protein
D IR04_04695 potE; putrescine transporter K03756 potE; putrescine:ornithine antiporter
D IR04_06300 cadB; lysine/cadaverine antiporter K03757 cadB; cadaverine:lysine antiporter
D IR04_07140 arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D IR04_03685 transporter K16263 yjeH; amino acid efflux transporter
D IR04_18500 fieF; ferrous iron transporter K13283 fieF; ferrous-iron efflux pump FieF
D IR04_05730 transporter K18138 acrB; multidrug efflux pump
D IR04_08090 acriflavin resistance protein K18989 vexF; multidrug efflux pump
D IR04_12210 molecular chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE
D IR04_11850 permease K11939 rhtA; inner membrane transporter RhtA
D IR04_05910 chloramphenical resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D IR04_10355 sodium:proton antiporter K07084 yuiF; putative amino acid transporter
D IR04_03960 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D IR04_06335 permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D IR04_18545 C4-dicarboxylate ABC transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D IR04_00915 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D IR04_04320 lactate permease K03303 lutP; lactate permease
D IR04_17715 calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D IR04_04725 proline:sodium symporter PutP K11928 putP; sodium/proline symporter
D IR04_18580 sodium:solute symporter K14393 actP; cation/acetate symporter
D IR04_00160 serine/threonine protein kinase K07862 sstT; serine/threonine transporter
D IR04_00185 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D IR04_13355 nhaA; pH-dependent sodium/proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D IR04_14660 sodium:proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D IR04_15320 antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D IR04_10980 hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D IR04_00945 hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D IR04_18570 cvrA; potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D IR04_06915 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D IR04_18115 potassium transporter KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D IR04_18120 potassium transporter KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D IR04_18875 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D IR04_05125 potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein
D IR04_05130 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D IR04_15945 uracil transporter K02824 uraA; uracil permease
D IR04_18610 xanthine permease XanP K16345 xanP; xanthine permease XanP
D IR04_16525 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D IR04_03355 tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein
D IR04_00715 TnaB K03835 mtr; tryptophan-specific transport protein
D IR04_13505 serine/threonine protein kinase K03837 sdaC; serine transporter
D IR04_11800 septum formation protein K03837 sdaC; serine transporter
D IR04_14995 benzoate transporter K05782 benE; benzoate membrane transport protein
D IR04_02185 H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D IR04_16800 chorismate-binding protein K07240 chrA; chromate transporter
D IR04_15295 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D IR04_07900 Bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family
D IR04_00330 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D IR04_14805 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D IR04_14800 C4-dicarboxylate ABC transporter permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D IR04_14795 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D IR04_02845 dcuC; C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D IR04_00695 cation:proton antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D IR04_00690 NADH/ubiquinone/plastoquinone K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D IR04_00685 sodium:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D IR04_00680 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D IR04_00675 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D IR04_08820 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D IR04_00100 transporter K13936 mdcF; malonate transporter and related proteins
D IR04_11460 membrane protein K24180 mleP; malate permease and related proteins
D IR04_02200 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D IR04_07430 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D IR04_05580 rhtB; homoserine transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D IR04_14850 threonine transporter RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein
D IR04_05895 threonine transporter K05835 rhtC; threonine efflux protein
D IR04_03680 lysine transporter LysE K05835 rhtC; threonine efflux protein
D IR04_04415 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D IR04_04420 branched-chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump
D IR04_11940 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein
D IR04_11945 TctB K07794 tctB; putative tricarboxylic transport membrane protein
D IR04_11950 transporter K07795 tctC; putative tricarboxylic transport membrane protein
D IR04_15910 permase K03548 perM; putative permease
D IR04_18585 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D IR04_15310 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D IR04_17100 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D IR04_05025 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D IR04_03990 energy transducer TonB K03832 tonB; periplasmic protein TonB
D IR04_12950 energy transducer TonB K03832 tonB; periplasmic protein TonB
D IR04_14340 lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D IR04_14350 biopolymer transporter TolR K03646 tolA; colicin import membrane protein
D IR04_14345 translocation protein TolB K03641 tolB; TolB protein
D IR04_09350 oxaloacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IR04_07740 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IR04_07735 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D IR04_09355 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D IR04_09360 sodium pump decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D IR04_07730 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D IR04_13675 trimethylamine N-oxide reductase I catalytic subunit K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D IR04_13680 nitrate reductase K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D IR04_13815 molecular chaperone TorD K03533 torD; TorA specific chaperone
D IR04_14905 cytochrome C K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D IR04_14900 trimethylamine N-oxide reductase I catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D IR04_12290 hemolysin D K03543 emrA; membrane fusion protein, multidrug efflux system
D IR04_12475 hemolysin D K12532 rtxD; membrane fusion protein, RTX toxin transport system
D IR04_04765 hemolysin secretion protein D K12542 lapC; membrane fusion protein, adhesin transport system
D IR04_13965 hemolysin secretion protein D K18302 mexJ; membrane fusion protein, multidrug efflux system
D IR04_05735 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D IR04_08085 hemolysin D K18990 vexE; membrane fusion protein, multidrug efflux system
D IR04_10040 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D IR04_00590 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D IR04_15530 iron transporter FeoA K04758 feoA; ferrous iron transport protein A
D IR04_15525 iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D IR04_15520 iron transporter FeoC K10123 feoC; putative ferrous iron transport protein C
D IR04_05330 universal stress protein UspB K06144 uspB; universal stress protein B
D IR04_15405 cytochrome C biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D IR04_11885 membrane protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:vcf02044]
D IR04_17265 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D IR04_13045 membrane protein K12340 tolC; outer membrane protein
D IR04_12480 peptidase C39 K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D IR04_12470 peptidase C39 K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D IR04_12475 hemolysin D K12532 rtxD; membrane fusion protein, RTX toxin transport system
D IR04_04780 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D IR04_04765 hemolysin secretion protein D K12542 lapC; membrane fusion protein, adhesin transport system
D IR04_13330 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D IR04_17315 general secretion pathway protein GspA K02450 gspA; general secretion pathway protein A
D IR04_17310 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B
D IR04_18720 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C
D IR04_18715 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D IR04_18710 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D IR04_18705 general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D IR04_18700 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D IR04_18695 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D IR04_18690 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D IR04_18685 general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D IR04_18680 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D IR04_18675 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L
D IR04_18670 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D IR04_18665 general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N
D IR04_17210 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D IR04_17195 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D IR04_17200 general secretion pathway protein GspE K02652 pilB; type IV pilus assembly protein PilB
D IR04_17205 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D IR04_09665 fimbrial protein K02655 pilE; type IV pilus assembly protein PilE
D IR04_13285 pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF
D IR04_18250 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D IR04_18245 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D IR04_18240 fimbrial protein K02664 pilO; type IV pilus assembly protein PilO
D IR04_18235 fimbrial protein K02665 pilP; type IV pilus assembly protein PilP
D IR04_18230 fimbrial protein K02666 pilQ; type IV pilus assembly protein PilQ
D IR04_07325 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D IR04_07330 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D IR04_09685 type IV pilin K02671 pilV; type IV pilus assembly protein PilV
D IR04_09675 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D IR04_09670 general secretion pathway protein GspH K08084 fimT; type IV fimbrial biogenesis protein FimT
D IR04_10320 hypothetical protein K08086 fimV; pilus assembly protein FimV
D IR04_09515 toxin coregulated pilin K10930 tcpA; toxin coregulated pilin
D IR04_09520 pilus assembly protein K10931 tcpB; toxin coregulated pilus biosynthesis protein B
D IR04_09530 pilus assembly protein K10932 tcpC; toxin coregulated pilus biosynthesis outer membrane protein C
D IR04_09540 pilus assembly protein K10933 tcpD; toxin coregulated pilus biosynthesis protein D
D IR04_09555 type II secretion system protein F K10934 tcpE; toxin coregulated pilus biosynthesis protein E
D IR04_09560 pilus assembly protein K10935 tcpF; toxin coregulated pilus biosynthesis protein F
D IR04_09510 transcriptional regulator K10919 tcpH; toxin coregulated pilus biosynthesis protein H
D IR04_09500 chemotaxis protein K10961 tcpI; toxin coregulated pilus biosynthesis protein I
D IR04_09570 methyltransferase K10966 tcpJ; toxin coregulated pilus biosynthesis protein J [EC:3.4.23.43 2.1.1.-]
D IR04_09505 pilus assembly protein K10920 tcpP; toxin coregulated pilus biosynthesis protein P
D IR04_09525 pilus assembly protein K10962 tcpQ; toxin coregulated pilus biosynthesis protein Q
D IR04_09535 pilus assembly protein K10963 tcpR; toxin coregulated pilus biosynthesis protein R
D IR04_09545 pilus assembly protein K10964 tcpS; toxin coregulated pilus biosynthesis protein S
D IR04_09550 pilus assembly protein K10965 tcpT; toxin coregulated pilus biosynthesis protein T
D IR04_07015 MSHA biogenesis protein MshA K10924 mshA; MSHA pilin protein MshA
D IR04_07010 MSHA biogenesis protein MshB K10925 mshB; MSHA pilin protein MshB
D IR04_07020 MSHA biogenesis protein MshC K10926 mshC; MSHA pilin protein MshC
D IR04_07025 MSHA biogenesis protein MshD K10927 mshD; MSHA pilin protein MshD
D IR04_06995 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D IR04_07005 MSHA biogenesis protein MshF K12277 mshF; MSHA biogenesis protein MshF
D IR04_07000 MSHA biogenesis protein MshG K12278 mshG; MSHA biogenesis protein MshG
D IR04_06965 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D IR04_06970 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ
D IR04_06975 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK
D IR04_06980 MSHA biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D IR04_06985 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM
D IR04_06990 MSHA biogenesis protein MshN K12284 mshN; MSHA biogenesis protein MshN
D IR04_07030 MSHA biogenesis protein MshO K12285 mshO; MSHA biogenesis protein MshO
D IR04_07035 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP
D IR04_07040 MSHA biogenesis protein MshQ K12287 mshQ; MSHA biogenesis protein MshQ
D IR04_07310 membrane protein K02221 yggT; YggT family protein
D IR04_14745 competence protein ComEA K02237 comEA; competence protein ComEA
D IR04_03665 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D IR04_14560 competence protein ComEC K02238 comEC; competence protein ComEC
D IR04_15490 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D IR04_15720 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D IR04_15785 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D IR04_15775 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D IR04_15770 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D IR04_15745 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D IR04_15740 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D IR04_15735 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D IR04_15730 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D IR04_15725 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D IR04_08675 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D IR04_08665 pilus assembly protein K12057 traF; conjugal transfer pilus assembly protein TraF
D IR04_08525 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D IR04_08520 conjugal transfer protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D IR04_08515 pilus assembly protein K12061 traW; conjugal transfer pilus assembly protein TraW
D IR04_08510 peptidase K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D IR04_08500 conjugal transfer protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D IR04_08475 conjugal transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D IR04_08470 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D IR04_08465 hypothetical protein K12066 traK; conjugal transfer pilus assembly protein TraK
D IR04_08460 pilus assembly protein K12067 traE; conjugal transfer pilus assembly protein TraE
D IR04_08455 conjugal transfer protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D IR04_08480 membrane protein K12069 traA; conjugal transfer pilus assembly protein TraA
D IR04_08425 phosphohydrolase K12070 traI; conjugal transfer pilus assembly protein TraI
D IR04_08430 conjugal transfer protein K12071 traD; conjugal transfer pilus assembly protein TraD
D IR04_08495 disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D IR04_17170 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D IR04_08670 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D IR04_00535 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D IR04_00510 type IV secretion protein DotU K11892 impK; type VI secretion system protein ImpK
D IR04_00505 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D IR04_00490 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D IR04_00485 type VI secretion protein K11896 impG; type VI secretion system protein ImpG
D IR04_00475 type VI secretion protein K11900 impC; type VI secretion system protein ImpC
D IR04_00470 type VI secretion protein K11901 impB; type VI secretion system protein ImpB
D IR04_00065 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D IR04_12310 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D IR04_00545 type VI secretion protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D IR04_00070 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG
D IR04_12315 type VI secretion protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D IR04_00480 lysozyme K11905 K11905; type VI secretion system protein
D IR04_00500 type VI secretion protein K11906 vasD; type VI secretion system protein VasD
D IR04_00515 ATPase AAA K11907 vasG; type VI secretion system protein VasG
D IR04_00530 type VI secretion protein K11910 vasJ; type VI secretion system protein VasJ
D IR04_00540 type VI secretion protein K11911 vasL; type VI secretion system protein VasL
D IR04_00495 signal peptide protein K11894 impI; type VI secretion system protein ImpI
D IR04_00525 type VI secretion protein K11909 vasI; type VI secretion system protein VasI
D IR04_17060 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IR04_18325 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D IR04_02975 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IR04_09110 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IR04_06530 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IR04_09115 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IR04_02970 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IR04_08145 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IR04_17965 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IR04_07780 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IR04_05630 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IR04_09105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IR04_04945 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IR04_05365 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA
D IR04_02220 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D IR04_05370 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D IR04_05375 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vcf02042]
D IR04_12525 cholera enterotoxin subunit A2 K10928 ctxA; cholera enterotoxin subunit A [EC:2.4.2.36]
D IR04_12520 cholera enterotoxin subunit B K10929 ctxB; cholera enterotoxin subunit B
D IR04_12530 zonular occludens toxin K10954 zot; zona occludens toxin
D IR04_16735 C4-dicarboxylate ABC transporter K11041 eta; exfoliative toxin A/B
D IR04_00970 hemolysin K10948 hlyA; hemolysin
D IR04_12495 peptidase C80 K10953 rtxA; RTX toxin RtxA
D IR04_03655 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IR04_06260 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IR04_07770 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IR04_12535 multidrug ABC transporter ATPase K10952 ace; accessory cholera enterotoxin
D IR04_05115 hemolysin K11068 hlyIII; hemolysin III
D IR04_00965 thermolabile hemolysin K11018 tlh; thermolabile hemolysin
D IR04_13470 peptidase M9 K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:vcf02022]
D IR04_09020 phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IR04_09015 transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D IR04_18620 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D IR04_11890 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D IR04_11895 chemotaxis protein CheY K07661 rstA; two-component system, OmpR family, response regulator RstA
D IR04_18515 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D IR04_18510 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D IR04_04880 histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D IR04_04885 XRE family transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D IR04_02210 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IR04_02215 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IR04_03040 chemotaxis protein CheY K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D IR04_13810 transcriptional regulator K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D IR04_16940 ATPase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D IR04_16935 TorR family transcriptional regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D IR04_13410 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D IR04_01060 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D IR04_11685 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D IR04_02880 histidine kinase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D IR04_02875 nitrate/nitrite response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D IR04_02925 histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D IR04_02920 transcriptional regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D IR04_17355 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D IR04_11380 sirA; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D IR04_13485 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D IR04_11680 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D IR04_09345 ATPase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D IR04_09340 dpiA; two-component response regulator DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D IR04_13245 histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D IR04_13240 chemotaxis protein CheY K02475 K02475; two-component system, CitB family, response regulator
D IR04_08885 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D IR04_08880 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D IR04_18790 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D IR04_18795 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D IR04_03020 ATPase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D IR04_03015 chemotaxis protein CheY K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D IR04_14785 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D IR04_14790 C4-dicarboxylate ABC transporter K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D IR04_00635 chemotaxis protein CheY K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D IR04_12835 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D IR04_10755 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D IR04_04835 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_12230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_04840 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_15470 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_11875 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_12220 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_12235 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_10745 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_04805 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_15455 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_12250 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_13230 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_15165 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_04185 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_16165 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_03170 ATPase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D IR04_02170 chemotaxis protein CheY K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D IR04_10445 phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D IR04_10440 ATPase AAA K10912 luxO; two-component system, repressor protein LuxO
D IR04_15800 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D IR04_15795 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D IR04_10735 histidine kinase K20976 hptB; histidine phosphotransfer protein HptB
D IR04_04790 chemotaxis protein CheY K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D IR04_08055 histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS
C 02035 Bacterial motility proteins [BR:vcf02035]
D IR04_04835 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_12230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D IR04_04825 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_04830 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_15440 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_15445 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_12255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D IR04_06840 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D IR04_10750 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D IR04_04810 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D IR04_04815 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_16160 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_12240 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D IR04_04805 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_15455 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_12250 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D IR04_04840 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_15470 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_11875 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_12220 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_12235 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_10745 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D IR04_15465 protein phosphatase K03414 cheZ; chemotaxis protein CheZ
D IR04_13230 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_15165 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_04185 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_16165 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D IR04_02840 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_17280 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_03360 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_13440 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_03770 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14460 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14505 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_14645 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00035 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_05420 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04275 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_00785 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_06010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04555 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_06310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_01200 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04665 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04715 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_15905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04800 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_04820 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11745 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11785 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_07240 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_11860 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12265 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12270 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_12300 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D IR04_02820 chemotaxis protein K03776 aer; aerotaxis receptor
D IR04_04350 chemotaxis protein K03776 aer; aerotaxis receptor
D IR04_15775 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D IR04_15770 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D IR04_15765 flagellar biogenesis protein K02413 fliJ; flagellar protein FliJ
D IR04_15740 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D IR04_15735 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D IR04_15730 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D IR04_15725 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D IR04_15490 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D IR04_15720 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D IR04_15780 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IR04_15750 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D IR04_15745 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D IR04_15785 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D IR04_16120 flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D IR04_16170 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D IR04_16125 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D IR04_15755 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D IR04_05415 flagellar basal body-associated protein FliL-like protein K02415 fliL; flagellar protein FliL
D IR04_15790 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D IR04_15760 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D IR04_16155 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D IR04_16150 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D IR04_16145 flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D IR04_16135 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D IR04_16130 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D IR04_16115 flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D IR04_16140 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D IR04_16110 flgK; flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D IR04_16105 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D IR04_16180 molecular chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D IR04_16195 flagellar basal-body protein K24343 flgT; flagellar H-ring protein FlgT
D IR04_16190 membrane protein K24344 flgO; flagellar H-ring protein FlgO
D IR04_16185 hypothetical protein K09860 flgP; outer membrane protein FlgP
D IR04_18090 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D IR04_10370 flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D IR04_15830 flagellin B K02406 fliC; flagellin
D IR04_15835 flagellin K02406 fliC; flagellin
D IR04_15840 flagellin K02406 fliC; flagellin
D IR04_16095 flagellin K02406 fliC; flagellin
D IR04_16100 flagellin K02406 fliC; flagellin
D IR04_15820 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D IR04_15810 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D IR04_15475 RNA polymerase sigma 70 K02405 fliA; RNA polymerase sigma factor FliA
D IR04_09815 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D IR04_09820 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D IR04_15805 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D IR04_15800 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D IR04_15795 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D IR04_16175 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D IR04_15825 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D IR04_15815 flagellar rod protein FlaI K06604 flaI; flagellar protein FlaI
D IR04_15485 flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D IR04_15480 cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D IR04_07325 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D IR04_07330 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D IR04_17195 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D IR04_17200 general secretion pathway protein GspE K02652 pilB; type IV pilus assembly protein PilB
D IR04_17205 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D IR04_17210 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D IR04_13285 pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF
D IR04_18230 fimbrial protein K02666 pilQ; type IV pilus assembly protein PilQ
D IR04_18235 fimbrial protein K02665 pilP; type IV pilus assembly protein PilP
D IR04_18240 fimbrial protein K02664 pilO; type IV pilus assembly protein PilO
D IR04_18245 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D IR04_18250 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D IR04_09685 type IV pilin K02671 pilV; type IV pilus assembly protein PilV
D IR04_09675 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D IR04_09665 fimbrial protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vcf04812]
D IR04_07045 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D IR04_08270 plasmid stability protein StbA K18640 parM; plasmid segregation protein ParM
D IR04_17075 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IR04_17080 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D IR04_14940 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D IR04_14945 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D IR04_14950 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D IR04_18960 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D IR04_15450 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D IR04_04930 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D IR04_18955 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IR04_04925 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vcf04147]
D IR04_10265 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D IR04_17325 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IR04_03670 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IR04_15135 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IR04_07405 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IR04_03035 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_15175 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_07445 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IR04_16640 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D IR04_09070 peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D IR04_18375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_03575 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IR04_09655 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D IR04_06830 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IR04_09230 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IR04_06525 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IR04_06775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IR04_14640 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D IR04_17500 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_15065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_06170 rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_16810 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IR04_02960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IR04_10270 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IR04_10605 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D IR04_18280 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IR04_18285 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IR04_17810 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D IR04_13185 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IR04_00060 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D IR04_03215 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D IR04_18775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IR04_05445 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D IR04_12005 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D IR04_03605 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D IR04_17485 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IR04_02680 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IR04_06280 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IR04_18270 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_17140 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IR04_03920 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IR04_18405 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IR04_01415 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein
D IR04_01565 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein
D IR04_01795 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:vcf02048]
D IR04_14010 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D IR04_14025 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D IR04_14030 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D IR04_18210 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D IR04_01820 DNA methylase N-4 K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D IR04_00885 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IR04_01385 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D IR04_01800 RelE toxin K06218 relE; mRNA interferase RelE/StbE
D IR04_01955 RelE toxin K06218 relE; mRNA interferase RelE/StbE
D IR04_01805 antitoxin K18923 stbD; antitoxin StbD
D IR04_01950 antitoxin K18923 stbD; antitoxin StbD
D IR04_01440 addiction module toxin RelE K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D IR04_01445 damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D IR04_09455 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D IR04_13600 phage-shock protein K03973 pspC; phage shock protein C
D IR04_13605 phage-shock protein K03970 pspB; phage shock protein B
D IR04_01610 plasmid stabilization protein ParE K19092 parE1_3_4; toxin ParE1/3/4
D IR04_01395 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D IR04_01725 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D IR04_02010 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D IR04_01615 antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D IR04_01940 death-on-curing protein K07341 doc; death on curing protein
D IR04_01400 prevent-host-death protein K19165 phd; antitoxin Phd
D IR04_01730 prevent-host-death protein K19165 phd; antitoxin Phd
D IR04_01755 toxin K07334 higB-1; toxin HigB-1
D IR04_01760 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1
D IR04_13005 hypothetical protein K19334 tabA; biofilm protein TabA
D IR04_17075 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IR04_07045 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D IR04_17235 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D IR04_17240 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D IR04_16225 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IR04_17440 hypothetical protein K09159 cptB; antitoxin CptB
D IR04_09135 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:vcf04090]
C 01504 Antimicrobial resistance genes [BR:vcf01504]
D IR04_08330 aminoglycoside phosphotransferase K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87]
D IR04_08325 3'-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D IR04_10980 hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D IR04_00945 hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D IR04_08310 MFS transporter K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D IR04_01335 chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D IR04_01125 antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D IR04_08305 type VI secretion protein K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D IR04_08335 dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D IR04_08655 dihydrofolate reductase K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D IR04_05735 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D IR04_05730 transporter K18138 acrB; multidrug efflux pump
D IR04_13965 hemolysin secretion protein D K18302 mexJ; membrane fusion protein, multidrug efflux system
D IR04_10210 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D IR04_17265 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D IR04_13045 membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:vcf00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vcf03100]
D IR04_05215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_06460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_06895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_17570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_18825 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IR04_05755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07705 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07715 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07710 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_14865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07695 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IR04_07215 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IR04_07225 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IR04_07245 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IR04_10425 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IR04_05230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_08985 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_06910 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_06475 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_18810 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IR04_11395 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IR04_03265 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IR04_03305 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IR04_16055 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_16030 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_16045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_16085 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_16075 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IR04_05695 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IR04_18855 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IR04_08970 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IR04_06635 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_11400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_11410 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_06655 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_06640 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_06645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_02340 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_06515 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IR04_05760 tRNA-His K14226 tRNA-His; tRNA His
D IR04_05770 tRNA-His K14226 tRNA-His; tRNA His
D IR04_06455 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IR04_06890 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IR04_17575 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IR04_08150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_03270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_11405 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_17590 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16070 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_16040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IR04_18850 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IR04_16015 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_16065 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_16035 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_06670 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_08155 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_06650 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_06665 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_06660 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_07530 tRNA-Met K14230 tRNA-Met; tRNA Met
D IR04_07235 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IR04_07260 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IR04_07250 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IR04_05765 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IR04_05775 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IR04_16250 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IR04_15345 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IR04_13975 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_05710 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_15350 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_07690 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_07700 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IR04_07255 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_07230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_06505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_07220 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_17555 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_06520 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IR04_05235 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D IR04_06510 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IR04_09915 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IR04_09925 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IR04_09920 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IR04_18845 tRNA-Val K14237 tRNA-Val; tRNA Val
D IR04_13205 tRNA-Val K14237 tRNA-Val; tRNA Val
D IR04_13210 tRNA-Val K14237 tRNA-Val; tRNA Val
D IR04_18830 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_05690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_18860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_06885 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_06450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_17580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_08965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_05210 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IR04_18820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_06465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_05220 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_05700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_06900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_17565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_08975 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_18840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IR04_17550 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_05225 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_06905 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_08980 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_05705 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_18815 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_17560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_06470 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_18835 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IR04_18975 bacterial RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D IR04_04705 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D IR04_10685 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D IR04_15105 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D IR04_07745 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D IR04_17835 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D IR04_02610 methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D IR04_15130 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D IR04_11490 PilB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D IR04_02475 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D IR04_10810 hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D IR04_05380 cytochrome C biogenesis protein CcsA K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D IR04_15900 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D IR04_09495 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D IR04_04435 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D IR04_15845 deferrochelatase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D IR04_04250 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D IR04_00820 dihydropteridine reductase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D IR04_05325 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D IR04_15925 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D IR04_02120 ribonucleoside-triphosphate reductase K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D IR04_14510 pflA; pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D IR04_07610 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D IR04_10935 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D IR04_03985 coproporphyrinogen III oxidase K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D IR04_11985 histone acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D IR04_03650 acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D IR04_10135 lnt; apolipoprotein acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D IR04_08230 acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D IR04_11420 acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D IR04_13880 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D IR04_13885 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D IR04_12895 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D IR04_15045 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D IR04_05560 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D IR04_08790 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D IR04_16590 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D IR04_04335 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D IR04_17275 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D IR04_17010 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D IR04_14810 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D IR04_05840 hypothetical protein K25555 dncV; cyclic GMP-AMP synthase [EC:2.7.7.-]
D IR04_14365 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D IR04_14845 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D IR04_11200 S-adenosylmethionine tRNA ribosyltransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D IR04_15495 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D IR04_12025 chemotaxis protein CheY K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D IR04_09310 hypothetical protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D IR04_08550 DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D IR04_07365 DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D IR04_15210 DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D IR04_05440 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D IR04_16865 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D IR04_15625 histidine kinase K01175 ybfF; esterase [EC:3.1.-.-]
D IR04_16515 hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D IR04_10700 chitinase K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D IR04_03000 chitinase K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D IR04_00665 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IR04_05145 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IR04_11700 dehydrogenase K18454 deaA; chitin disaccharide deacetylase [EC:3.5.1.105]
D IR04_07075 amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D IR04_13095 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D IR04_17670 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D IR04_17290 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D IR04_15275 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D IR04_03315 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D IR04_00780 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D IR04_16345 phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D IR04_00855 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D IR04_02570 4-aminobutyrate aminotransferase K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D IR04_16680 cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D IR04_14055 N-acetylneuraminic acid mutarotase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D IR04_17805 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D IR04_12940 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D IR04_10400 electron transporter RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D IR04_10410 electron transporter RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D IR04_16620 NADH:ubiquinone oxidoreductase K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D IR04_16615 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D IR04_16610 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D IR04_16605 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D IR04_16600 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D IR04_16595 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D IR04_12425 ATPase P K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D IR04_10490 zntA; zinc ABC transporter ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D IR04_07945 transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A
D IR04_03045 TMAO reductase K11930 torT; periplasmic protein TorT
D IR04_09090 acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D IR04_12825 formate dehydrogenase K02379 fdhD; FdhD protein
D IR04_09160 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D IR04_09410 ferredoxin K05524 fdxA; ferredoxin
D IR04_11570 (Fe-S)-binding protein K11107 yfaE; ferredoxin
D IR04_10395 electron transporter RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D IR04_10390 elongation factor G K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D IR04_10415 electron transporter RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D IR04_04935 FMN-binding protein MioC K06205 mioC; MioC protein
D IR04_17180 flavodoxin K03840 fldB; flavodoxin II
D IR04_09140 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D IR04_03905 cytochrome b562 family protein K15536 cybC; soluble cytochrome b562
D IR04_02890 mycothiol reductase K02570 napD; periplasmic nitrate reductase NapD
D IR04_02885 ferredoxin K02572 napF; ferredoxin-type protein NapF
D IR04_13685 NapE K02571 napE; periplasmic nitrate reductase NapE
D IR04_15635 hypothetical protein K03839 fldA; flavodoxin I
D IR04_02905 cytochrome C K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D IR04_10185 cysteine biosynthesis protein CysZ K06203 cysZ; CysZ protein
D IR04_03890 hypothetical protein K08234 yaeR; glyoxylase I family protein
D IR04_07320 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D IR04_14725 membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D IR04_14720 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D IR04_05490 heme biosynthesis protein HemY K02498 hemY; HemY protein
D IR04_05360 ubiB; ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D IR04_05355 membrane protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D IR04_05725 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D IR04_08225 sterol-binding protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D IR04_09760 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein
D IR04_09690 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D IR04_04485 DoxD-like family protein K15977 K15977; putative oxidoreductase
D IR04_02430 protein acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D IR04_11035 stationary phase/starvation inducible regulatory protein CspD K03704 cspA; cold shock protein
D IR04_00745 cold-shock protein K03704 cspA; cold shock protein
D IR04_00825 cold-shock protein K03704 cspA; cold shock protein
D IR04_04090 cold-shock protein K03704 cspA; cold shock protein
D IR04_06570 anti-RNA polymerase sigma 70 factor K07740 rsd; regulator of sigma D
D IR04_07980 nitrogen regulatory protein P-II 1 K04752 glnK; nitrogen regulatory protein P-II 2
D IR04_18630 transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
D IR04_06225 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D IR04_13535 heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D IR04_11040 ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D IR04_14775 trigger factor K03545 tig; trigger factor
D IR04_09620 SsrA-binding protein K03664 smpB; SsrA-binding protein
D IR04_05075 ATP-dependent protease K07391 comM; magnesium chelatase family protein
D IR04_04165 SM-20 K07394 K07394; SM-20-related protein
D IR04_03945 protein-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase
D IR04_03660 osmotically inducible protein OsmC K07397 yhfA; putative redox protein
D IR04_18650 amino acid ABC transporter substrate-binding protein K07400 nfuA; Fe/S biogenesis protein NfuA
D IR04_10250 hypothetical protein K07401 K07401; selenoprotein W-related protein
C 99976 Replication and repair
D IR04_10665 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D IR04_14110 hypothetical protein K03630 radC; DNA repair protein RadC
D IR04_08610 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D IR04_06015 hypothetical protein K03630 radC; DNA repair protein RadC
D IR04_05345 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D IR04_02275 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D IR04_07870 endonuclease K07460 yraN; putative endonuclease
D IR04_05155 DNA processing protein DprA K04096 smf; DNA processing protein
D IR04_10870 recombination factor protein RarA K07478 ycaJ; putative ATPase
D IR04_05165 DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D IR04_03465 resolvase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D IR04_08620 DNA primase K06919 K06919; putative DNA primase/helicase
D IR04_01265 transposase K07481 K07481; transposase, IS5 family
D IR04_01925 transposase K07481 K07481; transposase, IS5 family
D IR04_03450 transposase K07483 K07483; transposase
D IR04_14125 transposase K07483 K07483; transposase
D IR04_12630 transposase K07483 K07483; transposase
D IR04_01675 transposase K07483 K07483; transposase
D IR04_02095 transposase K07483 K07483; transposase
D IR04_07505 transposase K07483 K07483; transposase
D IR04_09720 transposase K07491 rayT; REP-associated tyrosine transposase
D IR04_01230 transposase K07491 rayT; REP-associated tyrosine transposase
D IR04_00905 transposase K07491 rayT; REP-associated tyrosine transposase
D IR04_02030 transposase K07491 rayT; REP-associated tyrosine transposase
D IR04_08345 transposase K07493 K07493; putative transposase
D IR04_16560 transposase K07493 K07493; putative transposase
D IR04_12635 integrase K07497 K07497; putative transposase
D IR04_01670 integrase K07497 K07497; putative transposase
D IR04_02100 integrase K07497 K07497; putative transposase
D IR04_03445 integrase K07497 K07497; putative transposase
D IR04_14120 integrase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D IR04_13610 phage-shock protein K03969 pspA; phage shock protein A
D IR04_00435 phage-shock protein K03972 pspE; phage shock protein E
D IR04_10615 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D IR04_14250 FAD-binding protein K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D IR04_11695 BCCT transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D IR04_10280 tppB; peptide ABC transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D IR04_17300 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D IR04_02855 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D IR04_13565 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D IR04_15195 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D IR04_16550 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D IR04_09315 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D IR04_12345 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D IR04_16875 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D IR04_08735 branched-chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D IR04_14915 transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D IR04_00800 transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D IR04_16860 nucleoside transporter NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D IR04_11050 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D IR04_13720 septation protein A K06190 ispZ; intracellular septation protein
D IR04_03375 allophanate hydrolase K06351 kipI; inhibitor of KinA
D IR04_05110 Gram-positive sporulation control protein Spo0M K06377 spo0M; sporulation-control protein
D IR04_14535 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D IR04_06595 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
D IR04_14625 membrane protein K07337 K07337; penicillin-binding protein activator
D IR04_13825 DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D IR04_11090 DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D IR04_09870 secretion protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D IR04_12720 prop expression regulator K03607 proQ; ProP effector
D IR04_05320 universal stress global response regulator UspA K06149 uspA; universal stress protein A
D IR04_12405 hypothetical protein K14055 uspE; universal stress protein E
D IR04_07110 universal stress protein K14061 uspF; universal stress protein F
D IR04_18765 GTP-binding protein TypA K06207 typA; GTP-binding protein
D IR04_16650 transcriptional regulator K07167 chrR; putative transcriptional regulator
D IR04_10150 nucleoside triphosphate hydrolase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D IR04_17645 ATPase K07175 phoH2; PhoH-like ATPase
D IR04_14525 serine/threonine protein kinase K07180 prkA; serine protein kinase
D IR04_06395 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein
D IR04_11755 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein
D IR04_17305 arylsulfatase K07184 ygiM; SH3 domain protein
D IR04_16835 SMP protein K07186 smp; membrane protein
D IR04_12770 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D IR04_10865 membrane protein K03634 lolA; outer membrane lipoprotein carrier protein
D IR04_15990 membrane protein K02494 lolB; outer membrane lipoprotein LolB
D IR04_15385 ABC transporter K04754 mlaA; phospholipid-binding lipoprotein MlaA
D IR04_16395 molecular chaperone K06142 hlpA; outer membrane protein
D IR04_07615 membrane protein K06194 nlpD; lipoprotein NlpD
D IR04_08195 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D IR04_03780 membrane protein K07275 ompW; outer membrane protein
D IR04_06810 membrane protein K07283 ydiY; putative salt-induced outer membrane protein
D IR04_15075 starvation-inducible protein K07285 slp; outer membrane lipoprotein
D IR04_16635 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D IR04_10525 cell envelope biogenesis protein AsmA K07289 asmA; AsmA protein
D IR04_10215 regulatory protein K07340 ybbJ; inner membrane protein
D IR04_13260 membrane protein K01993 ABC-2.TX; HlyD family secretion protein
D IR04_13510 membrane protein K01993 ABC-2.TX; HlyD family secretion protein
D IR04_13040 membrane protein K02005 ABC.CD.TX; HlyD family secretion protein
D IR04_15410 cytochrome C biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D IR04_15395 cystathionine gamma-synthase K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D IR04_09185 transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D IR04_09055 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein
D IR04_06780 bacterioferritin K02192 bfd; bacterioferritin-associated ferredoxin
D IR04_11740 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein
D IR04_02285 membrane protein K05794 terC; tellurite resistance protein TerC
D IR04_09065 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D IR04_07185 magnesium transporter ApaG K06195 apaG; ApaG protein
D IR04_05520 frataxin K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D IR04_03980 HuvX protein K07227 chuX; heme iron utilization protein
D IR04_11620 peptidase K07231 K07231; putative iron-regulated protein
D IR04_16755 short-chain dehydrogenase K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D IR04_02695 membrane protein K02442 glpM; membrane protein GlpM
D IR04_10345 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production
D IR04_12390 glucosaminidase K03796 bax; Bax protein
D IR04_13955 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D IR04_04625 oxidoreductase K03810 mviM; virulence factor
D IR04_17910 GCN5 family acetyltransferase K02348 elaA; ElaA protein
D IR04_03910 hydrolase K04477 ycdX; putative hydrolase
D IR04_16900 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D IR04_16785 methionyl-tRNA synthetase K06878 K06878; tRNA-binding protein
D IR04_07965 serine protease K07001 K07001; NTE family protein
D IR04_13450 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D IR04_08080 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D IR04_18755 hypothetical protein K07058 K07058; membrane protein
D IR04_18530 exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA
D IR04_16685 Fe-S metabolism protein SufE K02426 sufE; cysteine desulfuration protein SufE
D IR04_11595 hypothetical protein K07146 K07146; UPF0176 protein
D IR04_10960 lysogenization regulator K07153 hflD; high frequency lysogenization protein
D IR04_06725 protein SlyX-like protein K03745 slyX; SlyX protein
D IR04_05160 hypothetical protein K03747 smg; Smg protein
D IR04_03485 CreA K05805 creA; CreA protein
D IR04_07370 sprT K02742 sprT; SprT protein
D IR04_10340 DedD K03749 dedD; DedD protein
D IR04_18215 cell division protein DamX K03112 damX; DamX protein
D IR04_11245 SanA K03748 sanA; SanA protein
D IR04_12735 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D IR04_13950 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D IR04_00180 membrane protein K08974 K08974; putative membrane protein
D IR04_03435 membrane protein K08984 yjdF; putative membrane protein
D IR04_05565 membrane protein K08985 K08985; putative lipoprotein
D IR04_11830 membrane protein K08990 ycjF; putative membrane protein
D IR04_05620 membrane protein K08993 yhhL; putative membrane protein
D IR04_14425 hypothetical protein K09858 K09858; SEC-C motif domain protein
D IR04_10660 hypothetical protein K09914 K09914; putative lipoprotein
D IR04_04520 maltose operon protein K05775 malM; maltose operon periplasmic protein
D IR04_02295 alkylphosphonate utilization protein K06193 phnA; protein PhnA
D IR04_13145 membrane protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D IR04_13135 ankyrin K06867 K06867; uncharacterized protein
D IR04_11825 nucleoside triphosphate hydrolase K06918 K06918; uncharacterized protein
D IR04_00390 hypothetical protein K06933 K06933; uncharacterized protein
D IR04_02490 DNA-binding protein K06934 K06934; uncharacterized protein
D IR04_13530 Fe-S oxidoreductase K06938 K06938; uncharacterized protein
D IR04_10625 hypothetical protein K06940 K06940; uncharacterized protein
D IR04_14220 GTPase K06946 K06946; uncharacterized protein
D IR04_10925 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D IR04_11485 L-cystine transporter tcyP K06956 K06956; uncharacterized protein
D IR04_00195 acetyltransferase K06975 K06975; uncharacterized protein
D IR04_16545 deacylase K06987 K06987; uncharacterized protein
D IR04_02755 glyoxalase K06996 K06996; uncharacterized protein
D IR04_01510 glyoxalase K06996 K06996; uncharacterized protein
D IR04_17245 esterase K07000 K07000; uncharacterized protein
D IR04_14615 hypothetical protein K07000 K07000; uncharacterized protein
D IR04_18185 nuclease K07004 K07004; uncharacterized protein
D IR04_18085 hydrolase K07014 K07014; uncharacterized protein
D IR04_15340 hydrolase K07014 K07014; uncharacterized protein
D IR04_18135 hydrolase K07019 K07019; uncharacterized protein
D IR04_09250 hypothetical protein K07034 K07034; uncharacterized protein
D IR04_14325 hypothetical protein K07039 K07039; uncharacterized protein
D IR04_10860 prepilin peptidase K07039 K07039; uncharacterized protein
D IR04_18110 metal-binding protein K07070 K07070; uncharacterized protein
D IR04_10240 epimerase K07071 K07071; uncharacterized protein
D IR04_00645 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D IR04_07120 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D IR04_04645 permease K07090 K07090; uncharacterized protein
D IR04_14445 membrane protein K07090 K07090; uncharacterized protein
D IR04_17005 membrane protein K07090 K07090; uncharacterized protein
D IR04_08785 hypothetical protein K07090 K07090; uncharacterized protein
D IR04_00145 transcriptional initiation protein Tat K07093 K07093; uncharacterized protein
D IR04_10245 phosphodiesterase K07095 K07095; uncharacterized protein
D IR04_17840 hypothetical protein K07109 K07109; uncharacterized protein
D IR04_02735 membrane protein K07112 K07112; uncharacterized protein
D IR04_02730 transporter K07112 K07112; uncharacterized protein
D IR04_04655 NAD-dependent dehydratase K07118 K07118; uncharacterized protein
D IR04_02675 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D IR04_07875 penicillin-binding protein K07121 K07121; uncharacterized protein
D IR04_11280 molecular chaperone DnaJ K07126 K07126; uncharacterized protein
D IR04_04515 hypothetical protein K07126 K07126; uncharacterized protein
D IR04_00090 membrane protein K07136 K07136; uncharacterized protein
D IR04_09415 hypothetical protein K07137 K07137; uncharacterized protein
D IR04_16950 radical SAM protein K07139 K07139; uncharacterized protein
D IR04_04050 flavodoxin K07140 K07140; MOSC domain-containing protein
D IR04_16660 ATP-dependent protease K07157 K07157; uncharacterized protein
D IR04_07545 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D IR04_07305 hypothetical protein K09131 K09131; uncharacterized protein
D IR04_10080 hypothetical protein K09158 K09158; uncharacterized protein
D IR04_10630 hypothetical protein K09160 K09160; uncharacterized protein
D IR04_14520 hypothetical protein K09161 K09161; uncharacterized protein
D IR04_10930 plasmid partition ParA protein K09701 K09701; uncharacterized protein
D IR04_01540 hypothetical protein K09702 K09702; uncharacterized protein
D IR04_02525 hemolysin K09712 K09712; uncharacterized protein
D IR04_04785 polymerase K09749 K09749; uncharacterized protein
D IR04_09765 hypothetical protein K09768 K09768; uncharacterized protein
D IR04_13730 BolA family transcriptional regulator K09780 K09780; uncharacterized protein
D IR04_04080 membrane protein K09781 K09781; uncharacterized protein
D IR04_14530 hypothetical protein K09786 K09786; uncharacterized protein
D IR04_10600 membrane protein K09790 K09790; uncharacterized protein
D IR04_14545 hypothetical protein K09791 K09791; uncharacterized protein
D IR04_12415 cytochrome biogenesis protein K09792 K09792; uncharacterized protein
D IR04_09630 hypothetical protein K09801 K09801; uncharacterized protein
D IR04_03200 hypothetical protein K09802 K09802; uncharacterized protein
D IR04_01485 toxin K09803 K09803; uncharacterized protein
D IR04_07440 hypothetical protein K09807 K09807; uncharacterized protein
D IR04_11880 membrane protein K09824 virK; uncharacterized protein
D IR04_11905 hypothetical protein K05952 K05952; uncharacterized protein
D IR04_16585 hypothetical protein K05952 K05952; uncharacterized protein
D IR04_12750 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D IR04_13125 hypothetical protein K09822 K09822; uncharacterized protein
D IR04_13960 hypothetical protein K09857 K09857; uncharacterized protein
D IR04_14635 hypothetical protein K09859 K09859; uncharacterized protein
D IR04_16870 hypothetical protein K09861 K09861; uncharacterized protein
D IR04_17230 DNA gyrase inhibitor K09862 K09862; uncharacterized protein
D IR04_06245 hypothetical protein K09891 K09891; uncharacterized protein
D IR04_05475 aminotransferase K09894 K09894; uncharacterized protein
D IR04_17465 hypothetical protein K09895 K09895; uncharacterized protein
D IR04_05100 hypothetical protein K09896 K09896; uncharacterized protein
D IR04_04495 hypothetical protein K09897 K09897; uncharacterized protein
D IR04_18140 hypothetical protein K09898 K09898; uncharacterized protein
D IR04_10825 hypothetical protein K09899 K09899; uncharacterized protein
D IR04_11355 hypothetical protein K09901 K09901; uncharacterized protein
D IR04_14935 hypothetical protein K09902 K09902; uncharacterized protein
D IR04_15335 hypothetical protein K09904 K09904; uncharacterized protein
D IR04_15505 hypothetical protein K09907 K09907; uncharacterized protein
D IR04_07815 membrane protein K09908 K09908; uncharacterized protein
D IR04_00110 hypothetical protein K09909 K09909; uncharacterized protein
D IR04_14430 hypothetical protein K09909 K09909; uncharacterized protein
D IR04_07975 hypothetical protein K09910 K09910; uncharacterized protein
D IR04_12650 Ter macrodomain organizer matS-binding protein K09911 K09911; uncharacterized protein
D IR04_15120 hypothetical protein K09916 K09916; uncharacterized protein
D IR04_16745 2-hydroxyacid dehydrogenase K09918 K09918; uncharacterized protein
D IR04_17255 dehydrogenase K09920 K09920; uncharacterized protein
D IR04_05540 3',5'-cyclic-nucleotide phosphodiesterase K09921 K09921; uncharacterized protein
D IR04_13085 membrane protein K09922 K09922; uncharacterized protein
D IR04_12430 CcoH K09926 K09926; uncharacterized protein
D IR04_14565 ATP-binding protein K09928 K09928; uncharacterized protein
D IR04_06720 membrane protein K09937 K09937; uncharacterized protein
D IR04_15940 hypothetical protein K09938 K09938; uncharacterized protein
D IR04_06315 peptidase K09939 K09939; uncharacterized protein
D IR04_13320 hypothetical protein K09941 K09941; uncharacterized protein
D IR04_11635 hypothetical protein K09947 K09947; uncharacterized protein
D IR04_14960 deoxycytidine triphosphate deaminase K09948 K09948; uncharacterized protein
D IR04_17865 hypothetical protein K09950 K09950; uncharacterized protein
D IR04_00725 hypothetical protein K09954 K09954; uncharacterized protein
D IR04_01035 hypothetical protein K09956 K09956; uncharacterized protein
D IR04_01700 nitrate reductase K09962 K09962; uncharacterized protein
D IR04_09400 transporter K09964 K09964; uncharacterized protein
D IR04_16245 polysaccharide biosynthesis protein GumN K09973 K09973; uncharacterized protein
D IR04_15610 hypothetical protein K09977 K09977; uncharacterized protein
D IR04_17295 phosphate transport regulator K07220 K07220; uncharacterized protein
D IR04_11630 iron-regulated protein A K07338 K07338; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024