+D GENES KO
#
KEGG Orthology (KO) - Vibrio cholerae O1 M66-2
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vcm00010]
D VCM66_0358 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCM66_2609 pfkA; 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCM66_2465 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCM66_2608 glpX; glpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VCM66_0463 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VCM66_2590 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VCM66_1924 gapA-1; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCM66_A0802 gapA-2; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCM66_0462 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VCM66_0320 yibO; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VCM66_2370 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCM66_1932 pykA-1; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_A0666 pykA-2; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_0470 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_A0946 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VCM66_2337 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VCM66_2336 aceF; pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_A0489 ydbK; pyruvate-flavoredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VCM66_1957 adhE; alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCM66_1742 aldA-2; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VCM66_0283 acs-1; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCM66_1534 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VCM66_2019 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCM66_1925 conserved hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D VCM66_2658 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VCM66_1239 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VCM66_1499 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VCM66_0920 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCM66_1937 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:vcm00020]
D VCM66_2016 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D VCM66_0562 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VCM66_1097 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VCM66_2011 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VCM66_2010 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2008 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VCM66_2009 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VCM66_2013 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCM66_2012 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCM66_2015 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VCM66_2014 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VCM66_2576 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCM66_2577 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCM66_2578 frdC; fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VCM66_2579 frdD; fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VCM66_1259 putative fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VCM66_1513 fumC; aerobic fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VCM66_0417 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCM66_2658 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VCM66_2337 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VCM66_2336 aceF; pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VCM66_A0489 ydbK; pyruvate-flavoredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:vcm00030]
D VCM66_0358 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCM66_A0856 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VCM66_A0857 devB; devB protein K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D VCM66_A0858 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VCM66_2545 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VCM66_0458 tktA-1; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VCM66_A0582 tktA-2; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VCM66_A0581 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VCM66_2402 rpiA; ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D VCM66_2273 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D VCM66_A0129 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D VCM66_2271 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VCM66_2019 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCM66_2106 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VCM66_0273 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D VCM66_0270 eda; 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VCM66_0272 gntV; thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D VCM66_0463 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VCM66_2465 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCM66_2608 glpX; glpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VCM66_2609 pfkA; 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:vcm00040]
D VCM66_A0739 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VCM66_0380 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCM66_A0238 putative hexulose-6-phosphate synthase SgbH K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D VCM66_A0237 putative hexulose-6-phosphate isomerase SgbU K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VCM66_A0240 sugar isomerase SgaE, AraD/FucA family K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VCM66_2545 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:vcm00051]
D VCM66_0255 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCM66_A0614 cscK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCM66_0254 manA-1; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCM66_1750 manA-2; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCM66_0230 rfbB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCM66_A0999 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCM66_0229 rfbA; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VCM66_0231 rfbD; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VCM66_2609 pfkA; 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCM66_2465 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCM66_2608 glpX; glpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VCM66_A1004 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D VCM66_A0476 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VCM66_0463 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VCM66_2590 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VCM66_1743 frvA; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VCM66_1746 frwB; PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VCM66_A0475 fruA-2; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VCM66_A1003 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:vcm00052]
D VCM66_1534 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VCM66_1535 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VCM66_1536 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VCM66_A0733 galE-2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VCM66_0380 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCM66_2019 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCM66_2261 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VCM66_2609 pfkA; 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCM66_A0613 cscA; sucrose-6-phosphate dehydrogenase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:vcm00053]
D VCM66_A0739 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VCM66_A0241 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VCM66_A0242 sgaT; SgaT protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VCM66_A0244 conserved hypothetical protein K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D VCM66_A0238 putative hexulose-6-phosphate synthase SgbH K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D VCM66_A0237 putative hexulose-6-phosphate isomerase SgbU K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VCM66_A0240 sugar isomerase SgaE, AraD/FucA family K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:vcm00500]
D VCM66_A0611 scrA; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VCM66_A0613 cscA; sucrose-6-phosphate dehydrogenase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D VCM66_0380 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCM66_1238 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VCM66_1236 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VCM66_1237 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VCM66_1239 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VCM66_1499 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VCM66_A0657 glgC-2; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VCM66_1667 glgC-1; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VCM66_1666 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D VCM66_A0015 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VCM66_A0013 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VCM66_A0819 malS; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VCM66_A0246 amy1; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VCM66_A0014 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D VCM66_0920 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCM66_A0987 glgX; glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D VCM66_0867 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VCM66_0868 treC; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D VCM66_2019 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCM66_0358 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCM66_0255 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCM66_A0614 cscK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vcm00520]
D VCM66_A0026 chiA-2; chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VCM66_1876 chiA-1; chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VCM66_0650 exoII; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VCM66_2140 chb-2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCM66_0571 chb-1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCM66_0570 putative cellobiose/cellodextrin-phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D VCM66_0920 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCM66_0951 nagE; PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VCM66_1474 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D VCM66_0950 nagA-1; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VCM66_1721 nagA-2; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VCM66_A0983 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VCM66_0572 N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D VCM66_0255 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCM66_A0614 cscK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCM66_0472 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VCM66_0597 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D VCM66_2682 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VCM66_0195 putative PTS system, sucrose-specific IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VCM66_0194 GckR family protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VCM66_0648 glucokinase regulatory protein-related protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VCM66_0649 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D VCM66_2436 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VCM66_0302 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VCM66_1720 ROK family protein K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D VCM66_1719 Putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D VCM66_1714 putative N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D VCM66_0874 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VCM66_0875 epsD; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VCM66_1937 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VCM66_2019 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCM66_0380 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCM66_A0739 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VCM66_1535 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VCM66_1536 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VCM66_A0733 galE-2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VCM66_0358 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCM66_0254 manA-1; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCM66_1750 manA-2; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCM66_0230 rfbB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCM66_A0999 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCM66_0229 rfbA; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VCM66_0231 rfbD; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VCM66_0232 rfbE; perosamine synthase K13010 per; perosamine synthetase [EC:2.6.1.102]
D VCM66_A0657 glgC-2; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VCM66_1667 glgC-1; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:vcm00620]
D VCM66_0283 acs-1; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCM66_A0489 ydbK; pyruvate-flavoredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VCM66_2337 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VCM66_2336 aceF; pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_1789 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VCM66_1957 adhE; alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCM66_A0231 ackA-2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCM66_1054 ackA-1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCM66_1053 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VCM66_1932 pykA-1; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_A0666 pykA-2; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_0470 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_2167 accA; acetyl-CoA carboxylase, carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VCM66_0281 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VCM66_0280 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VCM66_0956 accD; acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VCM66_1310 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCM66_1742 aldA-2; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VCM66_A0943 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D VCM66_A0188 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D VCM66_A0944 oxidoreductase/iron-sulfur cluster-binding protein K18930 dld; D-lactate dehydrogenase
D VCM66_0966 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VCM66_2159 putative hydroxyacylglutathione hydrolase GloB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VCM66_1225 glyoxylase II family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VCM66_1143 sfcA; malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VCM66_2601 putative malate oxidoreductase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D VCM66_0751 oadA-2; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VCM66_0508 oadA-1; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VCM66_0750 oadB-2; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCM66_0509 oadB-1; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCM66_0752 putative oxaloacetate decarboxylase gamma chain 2 K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VCM66_0507 putative oxaloacetate decarboxylase gamma chain 1 K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VCM66_0417 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCM66_1259 putative fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VCM66_1513 fumC; aerobic fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VCM66_2576 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCM66_2577 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCM66_2578 frdC; fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VCM66_2579 frdD; fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VCM66_2566 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VCM66_2658 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VCM66_A0946 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VCM66_0692 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_2412 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vcm00630]
D VCM66_0694 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D VCM66_0283 acs-1; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCM66_0692 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D VCM66_0417 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCM66_2016 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D VCM66_0562 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_A0649 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VCM66_1525 katB; catalase K03781 katE; catalase [EC:1.11.1.6]
D VCM66_2426 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VCM66_2544 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D VCM66_0377 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCM66_2666 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCM66_0897 glyA-1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_A0277 glyA-2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_A0275 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VCM66_A0279 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_A0276 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VCM66_A0863 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VCM66_0270 eda; 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VCM66_1455 putative formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VCM66_1454 fdhB; formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VCM66_1453 fdnI; formate dehydrogenase, cytochrome B556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VCM66_1916 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:vcm00640]
D VCM66_0283 acs-1; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCM66_1295 prpE; prpE protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VCM66_A0231 ackA-2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCM66_1054 ackA-1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCM66_1053 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_1789 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VCM66_0026 zinc-binding alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCM66_2167 accA; acetyl-CoA carboxylase, carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VCM66_0281 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VCM66_0280 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VCM66_0956 accD; acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VCM66_2009 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VCM66_2008 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VCM66_1292 prpC; methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D VCM66_1293 acnA; aconitate hydratase 1 K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D VCM66_1294 conserved hypothetical protein K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D VCM66_0562 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VCM66_1291 prpB; carboxyphosphonoenolpyruvate phosphonomutase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D VCM66_A0669 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D VCM66_A0660 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:vcm00650]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCM66_1678 hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCM66_A0743 putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCM66_1957 adhE; alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCM66_A0646 phaC; polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D VCM66_A0649 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VCM66_0750 oadB-2; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCM66_0509 oadB-1; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCM66_2013 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCM66_2012 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCM66_2015 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VCM66_2014 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VCM66_2576 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCM66_2577 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCM66_2578 frdC; fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VCM66_2579 frdD; fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VCM66_1684 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VCM66_1789 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VCM66_A0489 ydbK; pyruvate-flavoredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VCM66_A0788 acs-2; acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VCM66_2405 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_0031 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_1530 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_2404 ilvH; acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VCM66_0030 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VCM66_1529 aldC; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D VCM66_1531 alsO; oxidoreductase, short-chain dehydrogenase/reductase family K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:vcm00660]
D VCM66_2405 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_0031 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_1530 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_2404 ilvH; acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VCM66_0030 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VCM66_1529 aldC; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D VCM66_2009 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VCM66_2008 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VCM66_2414 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VCM66_2415 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VCM66_2413 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vcm00562]
D VCM66_0703 inositol monophosphate family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VCM66_2590 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vcm00190]
D VCM66_1814 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D VCM66_2013 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCM66_2012 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCM66_2015 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VCM66_2014 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VCM66_2576 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCM66_2577 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCM66_2578 frdC; fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VCM66_2579 frdD; fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VCM66_0531 petA; ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VCM66_0532 petB; ubiquinol--cytochrome c reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VCM66_0533 petC; ubiquinol--cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VCM66_1398 ccoN; cytochrome c oxidase, subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VCM66_1397 ccoO; cytochrome c oxidase, subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VCM66_1396 ccoQ; cytochrome c oxidase, subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VCM66_1395 ccoP; cytochrome c oxidase, subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VCM66_1767 cydA-1; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCM66_1511 qxtA; quinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCM66_A0831 cydA-2; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCM66_1766 cydB-1; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCM66_1510 qxtB; quinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCM66_A0832 cydB-2; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCM66_1765 conserved hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D VCM66_2686 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VCM66_2684 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VCM66_2685 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VCM66_2687 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VCM66_2683 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VCM66_2690 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VCM66_2688 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VCM66_2689 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VCM66_2466 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D VCM66_1627 putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VCM66_0681 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VCM66_0686 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:vcm00680]
D VCM66_1455 putative formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VCM66_1454 fdhB; formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VCM66_1453 fdnI; formate dehydrogenase, cytochrome B556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VCM66_0897 glyA-1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_A0277 glyA-2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_0377 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCM66_2426 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VCM66_2370 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCM66_2566 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VCM66_0417 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCM66_0463 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VCM66_2465 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCM66_2608 glpX; glpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VCM66_2609 pfkA; 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCM66_1632 torA; trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCM66_1633 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VCM66_1660 torD; torD protein K03533 torD; TorA specific chaperone
D VCM66_1875 yecK; cytochrome c-type protein YecK K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VCM66_1874 bisZ; biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCM66_A0231 ackA-2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCM66_1054 ackA-1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCM66_1053 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VCM66_0283 acs-1; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCM66_A0946 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VCM66_0320 yibO; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VCM66_2403 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCM66_A0588 D-3-phosphoglycerate dehydrogenase-related protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCM66_1114 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VCM66_2268 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:vcm00910]
D VCM66_A0636 napA; periplasmic nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D VCM66_A0637 napB; periplasmic nitrate reductase, cytochrome c-type protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D VCM66_1435 conserved hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VCM66_2666 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCM66_2296 gltB-1; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCM66_2299 gltB-2; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCM66_2297 gltD-1; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VCM66_2300 gltD-2; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VCM66_0544 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D VCM66_A0270 cah; carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vcm00920]
D VCM66_0496 cysP; thiosulfate ABC transporter, periplasmic thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VCM66_A0414 periplasmic sulfate binding protein SBP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VCM66_0497 cysT; sulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D VCM66_0498 cysW; sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D VCM66_0499 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VCM66_2479 cysN; sulfate adenylate transferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VCM66_2480 cysD; sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VCM66_2478 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VCM66_2642 cysQ; cysQ protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VCM66_0371 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D VCM66_0369 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D VCM66_0370 cysI; sulfite reductase (NADPH) hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D VCM66_A0578 putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VCM66_0100 glpE; glpE protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D VCM66_0880 serine acetyltransferase-related protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_2569 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_0876 serine acetyltransferase-related protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_0924 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VCM66_1016 cysteine synthase/cystathionine beta-synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VCM66_1551 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VCM66_2603 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vcm00061]
D VCM66_2167 accA; acetyl-CoA carboxylase, carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VCM66_0281 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VCM66_0280 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VCM66_0956 accD; acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VCM66_0236 putative acyl carrier protein K02078 acpP; acyl carrier protein
D VCM66_1944 acp; acyl carrier protein K02078 acpP; acyl carrier protein
D VCM66_1946 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VCM66_A0710 fabH-2; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VCM66_1947 fabH-1; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VCM66_2032 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VCM66_1943 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VCM66_1945 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VCM66_1426 fabA; 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VCM66_2172 fabZ; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VCM66_1678 hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCM66_A0743 putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCM66_1909 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2406 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2264 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_0237 rfbL; rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vcm00071]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_1001 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_2679 fadA; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCM66_2154 oxidoreductase, acyl-CoA dehydrogenase family K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VCM66_1679 oxidoreductase, acyl-CoA dehydrogenase family K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VCM66_1909 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2406 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2264 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_0237 rfbL; rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_1957 adhE; alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vcm00561]
D VCM66_A0863 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCM66_A0703 gplK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VCM66_0093 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VCM66_1948 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VCM66_0481 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VCM66_2435 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VCM66_A0672 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VCM66_A0217 hlyC; lactonizing lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:vcm00564]
D VCM66_2571 gpsA; glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D VCM66_A0706 glpA; anaerobic glycerol-3-phosphate dehydrogenase, subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VCM66_A0615 glpD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VCM66_A0707 glpB; anaerobic glycerol-3-phosphate dehydrogenase, subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D VCM66_A0708 glpC; anaerobic glycerol-3-phosphate dehydrogenase, subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D VCM66_0093 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VCM66_0481 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VCM66_2435 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VCM66_A0672 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VCM66_0135 lypA; lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D VCM66_A0134 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VCM66_1495 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VCM66_1860 putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VCM66_2178 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VCM66_0299 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VCM66_0323 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D VCM66_1170 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D VCM66_2188 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D VCM66_A0034 putative phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D VCM66_1610 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:vcm00600]
D VCM66_2261 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VCM66_1722 nanH; neuraminidase K23550 nanH; sialidase [EC:3.2.1.18]
D VCM66_2140 chb-2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCM66_0571 chb-1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:vcm00592]
D VCM66_1001 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_2679 fadA; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vcm01040]
D VCM66_A0742 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VCM66_1018 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VCM66_1641 Acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vcm00230]
D VCM66_A0723 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VCM66_2358 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VCM66_2641 MutT/nudix family protein K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D VCM66_2271 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VCM66_2019 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCM66_2106 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VCM66_0960 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VCM66_0260 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D VCM66_2150 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VCM66_1183 purT; putative phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D VCM66_0826 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D VCM66_2149 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D VCM66_0051 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D VCM66_0052 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D VCM66_1145 putative phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D VCM66_1082 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VCM66_0261 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VCM66_1008 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VCM66_A0504 putative 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VCM66_2097 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VCM66_0489 surE; survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VCM66_A0760 gsk-2; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VCM66_1085 gsk-1; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VCM66_A0050 deoD-2; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VCM66_2270 deoD-1; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VCM66_A0930 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VCM66_0668 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VCM66_0543 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D VCM66_0725 guaB; inosine-5`-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VCM66_0714 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VCM66_0660 conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D VCM66_0441 HAM1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D VCM66_2200 gpt; xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D VCM66_0726 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VCM66_A0193 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D VCM66_2628 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D VCM66_1211 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VCM66_1210 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VCM66_A0470 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VCM66_1903 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D VCM66_1902 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VCM66_2630 spoT; guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VCM66_0289 gppA; guanosine-5-triphosphate,3-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VCM66_0680 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VCM66_2374 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D VCM66_0122 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VCM66_2522 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VCM66_2671 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D VCM66_0856 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VCM66_2482 cpdB; 2,3-cyclic-nucleotide 2-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VCM66_2339 putative 2,3-cyclic-nucleotide 2-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VCM66_0942 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VCM66_2373 mazG; mazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VCM66_2356 cpdA; cyclic AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D VCM66_0426 apaH; bis(5-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D VCM66_2478 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VCM66_2479 cysN; sulfate adenylate transferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VCM66_2480 cysD; sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VCM66_A0517 putative gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:vcm00240]
D VCM66_2312 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VCM66_2313 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VCM66_2432 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VCM66_2433 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VCM66_A0885 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D VCM66_1434 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D VCM66_0199 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D VCM66_1835 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D VCM66_2181 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D VCM66_0714 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VCM66_2373 mazG; mazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VCM66_0403 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D VCM66_1555 conserved hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D VCM66_2371 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D VCM66_1840 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D VCM66_0993 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D VCM66_A0504 putative 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VCM66_2097 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VCM66_0489 surE; survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VCM66_A0566 conserved hypothetical protein K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D VCM66_A0132 udp-2; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VCM66_0989 udp-1; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VCM66_A0930 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VCM66_2148 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D VCM66_2482 cpdB; 2,3-cyclic-nucleotide 2-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VCM66_2339 putative 2,3-cyclic-nucleotide 2-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VCM66_0856 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VCM66_1186 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D VCM66_A0470 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VCM66_1211 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VCM66_1210 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VCM66_1902 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VCM66_A0799 putative deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VCM66_1940 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D VCM66_2272 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D VCM66_1122 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D VCM66_0633 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vcm00250]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCM66_2392 nadB; l-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VCM66_1919 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VCM66_2523 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VCM66_0947 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VCM66_1901 putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VCM66_0377 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCM66_1829 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VCM66_2618 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D VCM66_2562 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VCM66_2561 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VCM66_2522 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VCM66_1082 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VCM66_2432 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VCM66_2433 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VCM66_1684 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VCM66_2296 gltB-1; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCM66_2299 gltB-2; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCM66_2297 gltD-1; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VCM66_2300 gltD-2; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VCM66_1435 conserved hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VCM66_A1031 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VCM66_2666 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCM66_2312 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VCM66_2313 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VCM66_0439 glutaminase family protein K01425 glsA; glutaminase [EC:3.5.1.2]
D VCM66_0472 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VCM66_0960 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vcm00260]
D VCM66_A0781 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_0505 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_0376 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_2287 thrA; threonine-sensitive aspartokinase I/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VCM66_2604 metL; methionine-sensitive aspartokinase II/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VCM66_2030 putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCM66_1960 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCM66_2286 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D VCM66_2285 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D VCM66_A0724 ybjU; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D VCM66_0897 glyA-1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_A0277 glyA-2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_0377 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCM66_2426 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VCM66_A0863 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VCM66_0320 yibO; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VCM66_2403 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCM66_A0588 D-3-phosphoglycerate dehydrogenase-related protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCM66_1114 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VCM66_2268 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VCM66_A0846 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VCM66_A0845 tdh; threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D VCM66_A0275 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VCM66_A0279 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_A0276 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VCM66_0299 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VCM66_A0624 sdaA-2; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VCM66_1255 sdaA-1; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VCM66_0027 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VCM66_A0834 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VCM66_1267 alanine racemase, putative K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VCM66_1124 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VCM66_1125 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VCM66_A0783 ectB; diaminobutyrate--pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VCM66_1565 aminotransferase, class III/decarboxylase, group II K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VCM66_A0784 ectA; L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D VCM66_A0782 ectC; ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vcm00270]
D VCM66_0880 serine acetyltransferase-related protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_2569 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_0876 serine acetyltransferase-related protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_0924 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VCM66_1016 cysteine synthase/cystathionine beta-synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VCM66_1611 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VCM66_0375 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VCM66_1644 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VCM66_0457 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VCM66_2302 pfs; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VCM66_0668 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VCM66_1248 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCM66_1441 GAF family protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D VCM66_A0194 putative site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCM66_0515 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VCM66_A0781 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_0505 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_0376 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_2287 thrA; threonine-sensitive aspartokinase I/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VCM66_2604 metL; methionine-sensitive aspartokinase II/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VCM66_2030 putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCM66_1960 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCM66_1551 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VCM66_2603 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VCM66_0029 ilvE; branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCM66_0514 gshA; glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VCM66_0453 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCM66_A0578 putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VCM66_1267 alanine racemase, putative K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VCM66_0417 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCM66_A0624 sdaA-2; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VCM66_1255 sdaA-1; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VCM66_0495 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D VCM66_2403 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCM66_A0588 D-3-phosphoglycerate dehydrogenase-related protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCM66_1114 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vcm00280]
D VCM66_0029 ilvE; branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCM66_1001 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_2679 fadA; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_A0007 putative 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCM66_A0788 acs-2; acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vcm00290]
D VCM66_0027 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VCM66_2414 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VCM66_2415 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VCM66_2413 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D VCM66_2405 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_0031 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_1530 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_2404 ilvH; acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VCM66_0030 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VCM66_0161 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VCM66_0028 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VCM66_0029 ilvE; branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCM66_0019 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VCM66_1901 putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VCM66_2412 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vcm00300]
D VCM66_A0781 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_0505 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_0376 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_2287 thrA; threonine-sensitive aspartokinase I/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VCM66_2604 metL; methionine-sensitive aspartokinase II/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VCM66_2030 putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCM66_1960 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCM66_2080 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VCM66_2314 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D VCM66_2252 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D VCM66_2538 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VCM66_2075 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VCM66_0126 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VCM66_0125 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VCM66_2329 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VCM66_2328 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vcm00310]
D VCM66_2010 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_1267 alanine racemase, putative K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VCM66_0266 cadA; lysine decarboxylase K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D VCM66_1684 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VCM66_A0145 putative transcriptional regulator K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D VCM66_1153 conserved hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:vcm00220]
D VCM66_2430 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D VCM66_2562 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VCM66_2561 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VCM66_0408 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D VCM66_0439 glutaminase family protein K01425 glsA; glutaminase [EC:3.5.1.2]
D VCM66_2666 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCM66_1435 conserved hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCM66_1901 putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VCM66_2239 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D VCM66_A0432 GCN5-related N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D VCM66_2563 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D VCM66_2564 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D VCM66_2538 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VCM66_2565 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vcm00330]
D VCM66_A0774 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D VCM66_A0773 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D VCM66_A1021 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VCM66_1564 conserved hypothetical protein K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D VCM66_1563 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCM66_A0907 speG; spermidine n1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D VCM66_2537 putative arginine/ornithine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D VCM66_2536 aruD; succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D VCM66_1197 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D VCM66_0445 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D VCM66_A1031 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VCM66_2197 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VCM66_2196 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:vcm00340]
D VCM66_1088 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D VCM66_1095 hisI; phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D VCM66_1093 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D VCM66_1092 hisH; amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D VCM66_1094 hisF; hisF protein K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D VCM66_1091 hisB; imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D VCM66_1090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCM66_1089 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D VCM66_1157 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VCM66_1158 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D VCM66_1160 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D VCM66_1159 hutG; formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:vcm00350]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCM66_1090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCM66_1248 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCM66_1299 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VCM66_1300 putative oxidoreductase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VCM66_1302 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VCM66_1301 conserved hypothetical protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D VCM66_1957 adhE; alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCM66_2589 putative 5-carboxymethyl-2-hydroxymuconate delta isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D VCM66_1684 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:vcm00360]
D VCM66_A0787 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCM66_1090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCM66_1248 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCM66_1299 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VCM66_0744 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VCM66_1501 perA; catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:vcm00380]
D VCM66_2010 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_A0159 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCM66_1525 katB; catalase K03781 katE; catalase [EC:1.11.1.6]
D VCM66_1501 perA; catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vcm00400]
D VCM66_A0994 phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCM66_0653 aroF; tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCM66_1449 aroH; trp-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCM66_2548 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D VCM66_0282 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D VCM66_0056 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D VCM66_2549 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D VCM66_1672 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D VCM66_2039 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D VCM66_1129 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VCM66_1128 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VCM66_1127 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D VCM66_1126 trpC_F; indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D VCM66_1124 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VCM66_1125 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VCM66_0654 tyrA; chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VCM66_0663 pheA; chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCM66_1090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCM66_1248 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCM66_A0787 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vcm00410]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCM66_0549 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:vcm00430]
D VCM66_1829 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VCM66_1435 conserved hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VCM66_1053 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VCM66_A0231 ackA-2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCM66_1054 ackA-1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:vcm00440]
D VCM66_A0564 phnX; phosphonoacetaldehyde phosphonohydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D VCM66_A0562 phnW; 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:vcm00450]
D VCM66_2603 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VCM66_1611 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VCM66_0375 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VCM66_1644 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VCM66_1137 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D VCM66_2479 cysN; sulfate adenylate transferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VCM66_2480 cysD; sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VCM66_0991 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vcm00460]
D VCM66_1919 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VCM66_2523 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VCM66_0897 glyA-1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_A0277 glyA-2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vcm00470]
D VCM66_0356 alr; alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VCM66_A0531 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VCM66_1267 alanine racemase, putative K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VCM66_0439 glutaminase family protein K01425 glsA; glutaminase [EC:3.5.1.2]
D VCM66_0157 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VCM66_2326 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VCM66_A0834 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VCM66_0126 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VCM66_0125 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VCM66_0744 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:vcm00480]
D VCM66_A0735 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D VCM66_A0737 conserved hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D VCM66_0514 gshA; glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VCM66_0453 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VCM66_2423 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VCM66_0713 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VCM66_1437 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VCM66_2202 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VCM66_0174 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D VCM66_1097 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VCM66_A0858 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VCM66_A0856 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VCM66_2557 peroxiredoxin family protein/glutaredoxin K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D VCM66_1305 putative antioxidant K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D VCM66_A1021 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:vcm00511]
D VCM66_1722 nanH; neuraminidase K23550 nanH; sialidase [EC:3.2.1.18]
D VCM66_2261 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VCM66_2140 chb-2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCM66_0571 chb-1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:vcm00540]
D VCM66_2171 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VCM66_2319 envA; UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VCM66_2173 lpxD; UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VCM66_1773 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VCM66_2170 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VCM66_1801 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VCM66_2445 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VCM66_2098 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VCM66_2446 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D VCM66_1799 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VCM66_0221 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VCM66_0201 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VCM66_1790 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VCM66_A1059 conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VCM66_0215 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VCM66_2153 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VCM66_2360 sugar kinase, pfkB family K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VCM66_0865 histidinol phosphatase-related protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VCM66_0228 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VCM66_0224 rfaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VCM66_0225 conserved hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vcm00541]
D VCM66_0380 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCM66_A0733 galE-2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VCM66_A0739 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VCM66_0254 manA-1; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCM66_1750 manA-2; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCM66_0230 rfbB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCM66_A0999 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCM66_0229 rfbA; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VCM66_0231 rfbD; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VCM66_0232 rfbE; perosamine synthase K13010 per; perosamine synthetase [EC:2.6.1.102]
D VCM66_2682 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VCM66_0874 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VCM66_0875 epsD; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VCM66_0245 rfbU; mannosyl-transferase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D VCM66_0247 galE-1; UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:vcm00550]
D VCM66_2436 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VCM66_0302 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VCM66_2323 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VCM66_2326 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VCM66_2329 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VCM66_A0531 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VCM66_2328 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VCM66_2179 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VCM66_0484 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCM66_2410 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCM66_2327 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VCM66_2324 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VCM66_2555 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VCM66_0560 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VCM66_0906 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VCM66_2330 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VCM66_0903 dacA-1; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCM66_A0266 dacA-2; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCM66_0590 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:vcm00552]
D VCM66_0484 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCM66_2410 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCM66_0245 rfbU; mannosyl-transferase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vcm00543]
D VCM66_0890 putative capsular polysaccharide biosynthesis glycosyltransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VCM66_0877 putative exopolysaccharide biosynthesis protein K20921 vpsD; polysaccharide biosynthesis protein VpsD
D VCM66_0882 putative polysaccharide biosynthesis protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D VCM66_0884 cpsF; UDP-N-acetyl-D-mannosamine transferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D VCM66_0880 serine acetyltransferase-related protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_2569 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_0876 serine acetyltransferase-related protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vcm00730]
D VCM66_0061 thiC; thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D VCM66_1251 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D VCM66_0063 thiF; thiF protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D VCM66_0706 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VCM66_0851 thiI; thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VCM66_0066 thiH; thiH protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D VCM66_0846 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VCM66_0065 thiG; thiG protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D VCM66_2189 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D VCM66_0324 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VCM66_0942 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:vcm00740]
D VCM66_1218 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VCM66_2192 ribB_A; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VCM66_2194 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VCM66_0129 conserved hypothetical protein K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D VCM66_A1018 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D VCM66_2191 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D VCM66_2193 ribC; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VCM66_0639 ribF; riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D VCM66_0296 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D VCM66_0673 frp; NADPH-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D VCM66_A0723 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VCM66_2358 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VCM66_2462 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vcm00750]
D VCM66_A1037 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D VCM66_0461 epd; D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D VCM66_2031 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D VCM66_1114 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VCM66_0429 pdxA; pyridoxal phosphate biosynthetic protein PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D VCM66_2381 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D VCM66_2285 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vcm00760]
D VCM66_2392 nadB; l-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VCM66_1756 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D VCM66_2345 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D VCM66_A0096 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D VCM66_A0050 deoD-2; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VCM66_2270 deoD-1; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VCM66_A0504 putative 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VCM66_2097 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VCM66_0489 surE; survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VCM66_A0204 conserved hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D VCM66_2373 mazG; mazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VCM66_0315 MutT/nudix family protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D VCM66_A0203 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D VCM66_0500 CinA-related protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D VCM66_A0670 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D VCM66_1451 cobB; nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D VCM66_0810 putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D VCM66_0151 dude; pyridine nucleotide-disulfide oxidoreductase, class I K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D VCM66_A0522 pntA; NAD(P) transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D VCM66_A0523 pntB; NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D VCM66_1684 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vcm00770]
D VCM66_2405 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_0031 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_1530 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCM66_2404 ilvH; acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VCM66_0030 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VCM66_0161 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VCM66_0028 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VCM66_0550 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D VCM66_2230 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D VCM66_0549 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VCM66_0304 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D VCM66_0203 dfp; DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D VCM66_2373 mazG; mazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VCM66_0210 kdtB; lipopolysaccharide core biosynthesis protein KdtB K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D VCM66_2350 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D VCM66_2380 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D VCM66_A0728 conserved hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D VCM66_0029 ilvE; branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCM66_1105 putative glutamate decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:vcm00780]
D VCM66_1070 bioC; biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D VCM66_2032 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VCM66_1943 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VCM66_1945 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VCM66_2172 fabZ; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VCM66_2638 bioH; bioH protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D VCM66_1069 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VCM66_1067 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VCM66_1071 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D VCM66_1068 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D VCM66_0303 birA; birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vcm00785]
D VCM66_0900 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D VCM66_0899 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D VCM66_1343 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2337 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VCM66_2336 aceF; pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VCM66_2011 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VCM66_2010 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VCM66_A0275 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VCM66_A0279 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VCM66_A0276 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vcm00790]
D VCM66_A0574 folE; GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D VCM66_A0332 NUDIX hydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D VCM66_0482 putative dihydroneopterin aldolase FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D VCM66_0551 folK-2; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VCM66_0483 folK-1; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VCM66_0596 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D VCM66_0425 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VCM66_0957 folC; folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D VCM66_1218 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VCM66_2192 ribB_A; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VCM66_2539 pabA; para-aminobenzoate synthase glutamine amidotransferase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D VCM66_1258 pabB; para-aminobenzoate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D VCM66_1942 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D VCM66_1254 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VCM66_A0786 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VCM66_A0787 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VCM66_1320 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VCM66_1321 exsB; exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VCM66_0859 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VCM66_0979 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VCM66_0981 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VCM66_0983 moaE; molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VCM66_0980 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VCM66_1469 moeA-1; molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VCM66_A0575 moeA-2; molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VCM66_1468 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vcm00670]
D VCM66_0425 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VCM66_A0572 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D VCM66_1866 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VCM66_0897 glyA-1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_A0277 glyA-2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCM66_2150 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VCM66_0261 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VCM66_0045 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VCM66_A0279 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VCM66_0375 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VCM66_0633 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VCM66_1916 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D VCM66_2605 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VCM66_2401 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vcm00860]
D VCM66_2137 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCM66_2103 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D VCM66_0584 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VCM66_0105 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VCM66_0120 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D VCM66_0119 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D VCM66_0316 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D VCM66_0055 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D VCM66_0116 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D VCM66_2675 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D VCM66_0943 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D VCM66_0118 putative uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VCM66_2481 cysG; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VCM66_1318 siroheme synthase component enzyme K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D VCM66_0995 cobA; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VCM66_A0685 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D VCM66_2303 putative cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D VCM66_1194 cobU; cobinamide kinase/cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D VCM66_1193 cobS; cobalamin (5`-phosphate) synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D VCM66_1192 cobT; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D VCM66_1195 putative alpha-ribazole-5`-phosphate phosphatase CobC K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D VCM66_A0867 hutZ; heme-binding protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D VCM66_0349 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vcm00130]
D VCM66_0095 ubiC; chorismate-pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D VCM66_0094 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VCM66_0294 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D VCM66_2462 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VCM66_2397 visC; visC protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D VCM66_1212 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D VCM66_2398 ubiH; ubiH protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D VCM66_0083 ubiE; ubiquinone/menaquinone biosynthesis methlytransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D VCM66_0919 VisC-related protein K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D VCM66_1900 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VCM66_0731 vibC; vibriobactin-specific isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D VCM66_1899 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D VCM66_1898 Putative acyl-CoA thioester hydrolase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D VCM66_1896 menC; o-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D VCM66_1895 menE; o-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D VCM66_1897 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D VCM66_A0539 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D VCM66_2593 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VCM66_2089 wrbA; Trp repressor-binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VCM66_1299 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vcm00900]
D VCM66_0846 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VCM66_2177 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D VCM66_0486 CDP-ribitol pyrophosphorylase-related protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D VCM66_2105 kinase, GHMP family K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D VCM66_0487 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D VCM66_0717 gcpE; gcpE protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D VCM66_0643 lytB; lytB protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_A0681 hmgA; 3-hydroxy-3-methylglutaryl CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D VCM66_2462 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VCM66_0847 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VCM66_0419 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VCM66_2179 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:vcm00907]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCM66_1001 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_2679 fadA; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D VCM66_0458 tktA-1; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VCM66_A0582 tktA-2; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:vcm01053]
D VCM66_1900 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VCM66_0731 vibC; vibriobactin-specific isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D VCM66_0729 vibB; vibriobactin-specific isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D VCM66_0732 vibA; vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D VCM66_0738 vibD; vibriobactin synthase component D K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D VCM66_0730 vibE; vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D VCM66_1519 enterobactin synthetase component F-related protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D VCM66_0733 vibH; vibriobactin synthetase, amide synthase subunit VibH K04778 vibH; vibriobactin synthetase
D VCM66_2132 vibF; nonribosomal peptide synthetase VibF K12237 vibF; nonribosomal peptide synthetase VibF
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:vcm00332]
D VCM66_2197 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VCM66_2196 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:vcm00261]
D VCM66_2479 cysN; sulfate adenylate transferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VCM66_2480 cysD; sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VCM66_A0781 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_0505 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_0376 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCM66_2287 thrA; threonine-sensitive aspartokinase I/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VCM66_2604 metL; methionine-sensitive aspartokinase II/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VCM66_2030 putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCM66_1960 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCM66_2080 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VCM66_2314 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vcm00521]
D VCM66_2019 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCM66_0703 inositol monophosphate family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:vcm00401]
D VCM66_0654 tyrA; chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCM66_1090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCM66_1248 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D VCM66_1129 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VCM66_1128 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D VCM66_1946 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VCM66_1945 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D VCM66_0236 putative acyl carrier protein K02078 acpP; acyl carrier protein
D VCM66_1944 acp; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vcm00999]
D VCM66_0457 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VCM66_0056 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
D VCM66_1868 pvcB; PvcB protein K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vcm00362]
D VCM66_1001 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_2679 fadA; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_0750 oadB-2; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCM66_0509 oadB-1; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vcm00627]
D VCM66_1310 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VCM66_2462 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:vcm00625]
D VCM66_1957 adhE; alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCM66_0777 aldA-1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:vcm00633]
D VCM66_A0595 oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D VCM66_A0952 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D VCM66_A0957 NADH-dependent flavin oxidoreductase, Oye family K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D VCM66_1001 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCM66_2679 fadA; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:vcm00643]
D VCM66_1300 putative oxidoreductase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VCM66_1302 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VCM66_1301 conserved hypothetical protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:vcm00930]
D VCM66_2678 fadB; fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCM66_1002 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:vcm00626]
D VCM66_1957 adhE; alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vcm03020]
D VCM66_0312 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VCM66_0313 rpoC; DNA-directed RNA polymerase, beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VCM66_2491 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VCM66_2629 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vcm03010]
D VCM66_1839 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D VCM66_2183 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D VCM66_2510 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D VCM66_2492 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D VCM66_2499 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D VCM66_0350 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D VCM66_0344 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D VCM66_2502 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D VCM66_0529 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D VCM66_2517 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D VCM66_2493 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D VCM66_0343 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D VCM66_2494 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D VCM66_2503 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D VCM66_0604 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D VCM66_0519 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D VCM66_2507 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D VCM66_0352 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D VCM66_2512 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D VCM66_0637 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D VCM66_0478 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D VCM66_0309 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D VCM66_2513 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D VCM66_2516 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D VCM66_2515 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D VCM66_2504 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D VCM66_2501 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D VCM66_0311 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VCM66_0353 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D VCM66_0310 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D VCM66_0308 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D VCM66_0528 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D VCM66_2506 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D VCM66_2497 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D VCM66_2509 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D VCM66_2490 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D VCM66_2500 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D VCM66_0522 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D VCM66_A0289 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D VCM66_0420 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D VCM66_2511 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D VCM66_2514 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D VCM66_2505 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D VCM66_1579 rplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D VCM66_0421 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D VCM66_0206 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D VCM66_2508 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D VCM66_2498 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D VCM66_0835 ribosomal protein, L31P family K02909 RP-L31; large subunit ribosomal protein L31
D VCM66_2599 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VCM66_1949 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D VCM66_0207 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D VCM66_0007 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D VCM66_A0288 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D VCM66_0836 putative ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D VCM66_2495 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D VCM66_16S01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S05 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_23S01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S07 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S06 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_5S01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S05 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vcm00970]
D VCM66_tRNAALA1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAALA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAALA5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAALA3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAALA4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAARG8 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAASN1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCM66_tRNAASN3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCM66_tRNAASN4 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCM66_tRNAASN2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCM66_tRNAASP1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNAASP5 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNAASP2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNAASP4 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNAASP3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNACYS1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCM66_AtRNACYS1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCM66_AtRNACYS2 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCM66_tRNAGLN3 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLN2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLN1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLN5 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLN4 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLU1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCM66_tRNAGLU3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCM66_tRNAGLU2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCM66_AtRNAGLY tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY7 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY6 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAHIS1 tRNA-His K14226 tRNA-His; tRNA His
D VCM66_tRNAHIS2 tRNA-His K14226 tRNA-His; tRNA His
D VCM66_tRNAILE1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCM66_tRNAILE3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCM66_tRNAILE2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCM66_tRNALEU11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU9 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU7 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU8 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_AtRNALEU tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALYS1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCM66_tRNALYS2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCM66_tRNAMET6 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET8 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET7 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET9 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET4 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET5 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET1 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET2 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET3 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAPHE1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCM66_tRNAPHE3 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCM66_tRNAPHE2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCM66_tRNAPRO1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCM66_tRNAPRO4 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCM66_tRNAPRO2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCM66_tRNAPRO3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCM66_tRNASER1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNASER5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNASER2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNASER3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNASER4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNATHR3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR6 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATRP1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VCM66_tRNATYR1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNATYR4 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNATYR5 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNATYR2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNATYR3 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNAVAL1 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCM66_tRNAVAL2 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCM66_tRNAVAL3 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCM66_tRNAVAL4 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCM66_2137 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCM66_0953 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VCM66_0503 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCM66_0722 conserved hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCM66_1121 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VCM66_1252 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VCM66_0021 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VCM66_0020 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VCM66_A0286 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VCM66_1066 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VCM66_1771 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VCM66_0991 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VCM66_0045 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VCM66_2425 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VCM66_0912 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VCM66_0640 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VCM66_0622 lysU; heat inducible lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VCM66_1998 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VCM66_0832 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VCM66_0718 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VCM66_1174 pheS; phenylalanyl-tRNA synthetase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VCM66_1175 pheT; phenylalanyl-tRNA synthetase, beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VCM66_0589 tyrS-2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCM66_0450 tyrS-1; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCM66_2543 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vcm03060]
D VCM66_2496 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VCM66_0306 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VCM66_0598 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VCM66_0701 secD-1; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCM66_A0651 secD-2; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCM66_A0650 secF-2; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCM66_0702 secF-1; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCM66_0700 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D VCM66_0004 yidC; putative Inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCM66_2317 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VCM66_2573 secB; protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VCM66_0518 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VCM66_0147 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VCM66_A0492 tatA-2; tatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VCM66_0086 tatA-1; tatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VCM66_0087 Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB
D VCM66_0088 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D VCM66_2385 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VCM66_0641 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vcm04122]
D VCM66_0706 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VCM66_A0578 putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VCM66_0024 putative Sulfurtransferase tusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VCM66_2086 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VCM66_0342 conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VCM66_0341 conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VCM66_0340 putative Sulfurtransferase tusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VCM66_1311 sulfite reductase, gamma subunit-related protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VCM66_1084 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VCM66_0983 moaE; molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VCM66_0979 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VCM66_0982 moaD; molybdenum cofactor biosynthesis protein D K03636 moaD; sulfur-carrier protein
D VCM66_A0576 moeB; molybdopterin biosynthesis MoeB protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D VCM66_0981 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VCM66_0980 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VCM66_0851 thiI; thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VCM66_0064 thiS; thiS protein K03154 thiS; sulfur carrier protein
D VCM66_0063 thiF; thiF protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:vcm03018]
D VCM66_0629 MutT/nudix family protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VCM66_1954 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VCM66_0290 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VCM66_2370 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCM66_0605 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VCM66_A0727 ATP-dependent RNA helicase, DEAD box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCM66_A0200 rhlE-2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCM66_1362 rhlE-1; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCM66_2519 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VCM66_A0763 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VCM66_0184 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VCM66_0292 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VCM66_2609 pfkA; 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCM66_0812 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D VCM66_A0779 groEL-2; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_2584 groEL-1; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_0331 putative host factor I protein K03666 hfq; host factor-I protein
D VCM66_0681 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VCM66_0686 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VCM66_0552 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vcm03030]
D VCM66_0284 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_1245 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_2156 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_2168 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCM66_1009 dnaZX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCM66_1939 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCM66_0909 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCM66_0614 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCM66_2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCM66_0013 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCM66_0355 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VCM66_0476 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VCM66_0382 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VCM66_2157 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VCM66_2169 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VCM66_0108 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCM66_0927 ligA-1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vcm03410]
D VCM66_0967 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VCM66_2282 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VCM66_0437 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VCM66_0209 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VCM66_A0977 ada; ada regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VCM66_1612 tag; DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VCM66_1783 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VCM66_2283 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VCM66_0108 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCM66_2340 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VCM66_0927 ligA-1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vcm03420]
D VCM66_1810 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VCM66_0379 uvrA; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D VCM66_0974 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VCM66_1169 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D VCM66_0178 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VCM66_0108 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCM66_0927 ligA-1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vcm03430]
D VCM66_0493 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VCM66_0329 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VCM66_0626 mutH; DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D VCM66_0178 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VCM66_1189 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VCM66_0724 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VCM66_0848 xseB; exodeoxyribonuclease, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VCM66_2340 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VCM66_0382 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VCM66_2168 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCM66_0013 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCM66_1009 dnaZX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCM66_0909 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCM66_1939 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCM66_0284 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_1245 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_2156 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCM66_0614 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCM66_0927 ligA-1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VCM66_2546 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:vcm03440]
D VCM66_2340 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VCM66_0382 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VCM66_0014 recF; recF protein K03629 recF; DNA replication and repair protein RecF
D VCM66_2382 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VCM66_1011 recR; recombination protein RecR K06187 recR; recombination protein RecR
D VCM66_0501 recA; recA protein K03553 recA; recombination protein RecA
D VCM66_0108 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCM66_1769 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VCM66_1768 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VCM66_1770 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VCM66_2631 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VCM66_2243 recB; exodeoxyribonuclease V, 135 kDa subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VCM66_2245 recC; exodeoxyribonuclease V, 125 kDa subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VCM66_2242 recD; exodeoxyribonuclease V, 67 kDa subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VCM66_2168 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCM66_0013 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCM66_1009 dnaZX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCM66_0909 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCM66_1939 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCM66_0284 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_1245 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_2156 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCM66_0614 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCM66_2598 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VCM66_0351 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D VCM66_1780 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vcm03250]
D VCM66_2222 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vcm02010]
D VCM66_0496 cysP; thiosulfate ABC transporter, periplasmic thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VCM66_A0414 periplasmic sulfate binding protein SBP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VCM66_0497 cysT; sulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D VCM66_0498 cysW; sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D VCM66_0499 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VCM66_1465 conserved hypothetical protein K05772 tupA; tungstate transport system substrate-binding protein
D VCM66_1466 ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D VCM66_1467 ABC transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D VCM66_A0684 modA; molybdenum ABC transporter, periplasmic molybdenum-binding protein K02020 modA; molybdate transport system substrate-binding protein
D VCM66_A0683 modB; molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D VCM66_A0682 modC; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VCM66_0566 fbpA; iron(III) ABC transporter, periplasmic iron-compound-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCM66_A0643 iron(III) ABC transporter, periplasmic iron-compound-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCM66_A0561 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCM66_0567 fbpB; iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VCM66_A0644 iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VCM66_A0559 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VCM66_A0645 iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCM66_0568 fbpC; iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCM66_A0560 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCM66_2460 tbpA; thiamin ABC transporter, periplasmic thiamin-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D VCM66_2459 putative thiamine ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D VCM66_2458 putative thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VCM66_1380 potD-1; spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCM66_1381 potD-2; spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCM66_0662 putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCM66_A1069 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCM66_1382 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D VCM66_1383 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D VCM66_1384 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VCM66_A0905 malE; maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VCM66_A0904 malF; maltose ABC transporter, permease protein K10109 malF; maltose/maltodextrin transport system permease protein
D VCM66_A0903 malG; maltose ABC transporter, permease protein K10110 malG; maltose/maltodextrin transport system permease protein
D VCM66_A0906 malK; maltose/maltodextrin ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VCM66_A0991 putative extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D VCM66_2439 conserved hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D VCM66_2440 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VCM66_2441 conserved hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VCM66_2438 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D VCM66_2442 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VCM66_A0128 rbsB; ribose ABC transporter, periplasmic D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D VCM66_A0127 rbsC; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D VCM66_A0126 rbsA; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VCM66_A0125 rbsD; ribose ABC transporter protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D VCM66_1280 mglB; galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VCM66_1283 mglC; galactoside ABC transporter, permease protein K10541 mglC; methyl-galactoside transport system permease protein
D VCM66_1282 mglA; galactoside ABC transporter, ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D VCM66_1490 ugpB; glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D VCM66_1491 ugpA; glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D VCM66_1492 ugpE; glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D VCM66_1493 ugpC; glycerol-3-phosphate ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D VCM66_A0067 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_0679 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_A0766 ABC transporter, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_A0068 pstC-2; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D VCM66_0682 pstC-1; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D VCM66_A0069 pstA-2; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D VCM66_0683 pstA-1; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D VCM66_A0070 pstB-2; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VCM66_0684 pstB-1; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VCM66_A0718 artI; arginine ABC transporter, periplasmic arginine-binding protein K09997 artI; arginine transport system substrate-binding protein
D VCM66_A0716 artM; arginine ABC transporter, permease protein K09998 artM; arginine transport system permease protein
D VCM66_A0717 artQ; arginine ABC transporter, permease protein K09999 artQ; arginine transport system permease protein
D VCM66_A0719 artP; arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VCM66_1317 amino acid ABC transporter, periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VCM66_1316 amino acid ABC transporter, permease protein K09970 aapQ; general L-amino acid transport system permease protein
D VCM66_1315 amino acid ABC transporter, permease protein K09971 aapM; general L-amino acid transport system permease protein
D VCM66_1314 amino acid ABC transporter, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VCM66_0010 amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VCM66_0009 amino acid ABC transproter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VCM66_0008 amino acid ABC transporter, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VCM66_1786 amino acid ABC transporter, periplasmic amino acid-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VCM66_1784 amino acid ABC transporter, permease protein K10023 aotM; arginine/ornithine transport system permease protein
D VCM66_1785 amino acid ABC transporter, permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D VCM66_1787 amino acid ABC transporter, ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VCM66_0862 yaeC; lipoprotein YaeC K02073 metQ; D-methionine transport system substrate-binding protein
D VCM66_0863 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D VCM66_0864 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VCM66_1047 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VCM66_1048 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VCM66_1049 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VCM66_1050 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VCM66_A0937 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCM66_1051 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCM66_1620 sapA; peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VCM66_1621 sapB; peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D VCM66_1622 sapC; peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D VCM66_1623 sapD; peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VCM66_1624 sapF; peptide ABC transporter, ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D VCM66_A0550 putative peptide ABC transporter, periplasmic peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D VCM66_A0549 putative peptide ABC transporter, permease protein K13894 yejB; microcin C transport system permease protein
D VCM66_A0548 putative peptide ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D VCM66_A0547 putative peptide ABC transporter, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D VCM66_0734 viuP; vibriobactin and enterobactin ABC transporter, periplasmic ferric vibriobactin/enterobactin-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D VCM66_0735 viuD; vibriobactin and enterobactin ABC transporter, permease protein K23186 fepD; iron-siderophore transport system permease protein
D VCM66_0736 viuG; vibriobactin and enterobactin ABC transporter, permease protein K23187 fepG; iron-siderophore transport system permease protein
D VCM66_0737 viuC; vibriobactin and enterobactin ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D VCM66_0190 fhuC; iron(III) ABC transporter, periplasmic iron-compound-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VCM66_0191 fhuD; iron(III) ABC transporter, permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D VCM66_0189 fhuB; iron(III) ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VCM66_2304 Vitamin B12-binding protein precursor K06858 btuF; vitamin B12 transport system substrate-binding protein
D VCM66_1199 putative vitamin B12 ABC transporter, permease protein K06073 btuC; vitamin B12 transport system permease protein
D VCM66_1200 putative vitamin B12 ABC transporter, ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VCM66_2005 znuA; zinc ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D VCM66_2007 znuB; zinc ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D VCM66_2006 znuC; zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VCM66_0234 rfbH; lipopolysaccharide/O-antigen transport protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D VCM66_0235 rfbI; lipopolysaccharide/O-antigen transport protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D VCM66_1806 Lipoprotein-releasing system transmembrane protein lolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VCM66_1808 Lipoprotein-releasing system transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D VCM66_1807 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VCM66_1978 ccmD; heme exporter protein D K02196 ccmD; heme exporter protein D
D VCM66_1979 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D VCM66_1980 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D VCM66_1981 ccmA; heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VCM66_2422 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D VCM66_2421 putative Inner membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D VCM66_2449 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VCM66_0149 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VCM66_0148 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VCM66_1802 msbA; transport ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VCM66_A0955 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VCM66_0187 putative hemolysin secretion ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VCM66_A1041 toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VCM66_1135 cydC; transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VCM66_1136 cydD; transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:vcm02060]
D VCM66_0921 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VCM66_0922 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VCM66_0920 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCM66_1937 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VCM66_0951 nagE; PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VCM66_A0611 scrA; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VCM66_0867 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VCM66_0195 putative PTS system, sucrose-specific IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VCM66_A1003 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VCM66_1238 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VCM66_1236 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VCM66_1237 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VCM66_A0241 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VCM66_A0242 sgaT; SgaT protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VCM66_A0477 fruB; PTS system, fructose-specific IIA/FPR component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VCM66_A0475 fruA-2; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VCM66_1746 frwB; PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VCM66_1743 frvA; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VCM66_A0476 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VCM66_0630 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VCM66_2454 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D VCM66_2452 ptsN; PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VCM66_1747 putative PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vcm03070]
D VCM66_2359 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1505 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_2653 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VCM66_2654 epsC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VCM66_2651 epsF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VCM66_2650 epsG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VCM66_2649 epsH; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VCM66_2648 epsI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VCM66_2647 epsJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VCM66_2646 epsK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VCM66_2645 epsL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VCM66_2644 epsM; cholera toxin secretion protein EpsM K02462 gspM; general secretion pathway protein M
D VCM66_2652 epsE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VCM66_0701 secD-1; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCM66_A0651 secD-2; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCM66_A0650 secF-2; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCM66_0702 secF-1; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCM66_0306 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VCM66_0598 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VCM66_2496 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VCM66_0700 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D VCM66_0004 yidC; putative Inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCM66_2317 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VCM66_0147 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VCM66_2573 secB; protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VCM66_0518 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VCM66_A0492 tatA-2; tatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VCM66_0086 tatA-1; tatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VCM66_0087 Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB
D VCM66_0088 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D VCM66_1371 vgrG-1; vgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCM66_A0121 vgrG-3; vgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCM66_A0017 vgrG-2; vgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCM66_1370 hcp-1; hcp protein K11903 hcp; type VI secretion system secreted protein Hcp
D VCM66_A0016 hcp-2; hcp protein K11903 hcp; type VI secretion system secreted protein Hcp
D VCM66_A0111 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D VCM66_A0118 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VCM66_A0113 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D VCM66_A0114 clpB-2; clpB protein K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vcm02020]
D VCM66_0678 phoR; histidine protein kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VCM66_0677 phoB; DNA-binding response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VCM66_A0067 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_0679 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_A0766 ABC transporter, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_2633 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VCM66_2634 ompR; transcriptional regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VCM66_2613 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VCM66_2612 cpxR; transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VCM66_1274 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VCM66_1275 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D VCM66_0524 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D VCM66_A1061 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VCM66_A1062 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VCM66_2065 flaB; flagellin FlaB K02406 fliC; flagellin
D VCM66_2066 flaD; flagellin FlaD K02406 fliC; flagellin
D VCM66_2067 flaE; flagellin FlaE K02406 fliC; flagellin
D VCM66_2110 flaC; flagellin FlaC K02406 fliC; flagellin
D VCM66_2111 flaA; flagellin core protein A K02406 fliC; flagellin
D VCM66_1990 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D VCM66_0849 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D VCM66_A0490 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VCM66_A0491 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VCM66_A0667 torS; sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VCM66_1659 torR; DNA-binding response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VCM66_1633 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VCM66_1632 torA; trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCM66_1660 torD; torD protein K03533 torD; TorA specific chaperone
D VCM66_2292 fexB; sensor histidine kinase FexB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VCM66_2291 fexA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VCM66_1287 conserved hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D VCM66_1288 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D VCM66_1289 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D VCM66_0012 dnaA; chromosomal DNA replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D VCM66_0749 citA; sensor kinase citA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VCM66_0748 citB; transcriptional regulator CitB K07702 dpiA; two-component system, CitB family, response regulator CitB
D VCM66_0754 citC; citrate (pro-3S)-lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D VCM66_0755 citD; citrate lyase, gamma subunit K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D VCM66_0756 citE; citrate lyase, beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D VCM66_0757 citF; citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D VCM66_0758 citX; citX protein K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D VCM66_0759 citG; citG protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D VCM66_A0201 dcuB; C4-dicarboxylate transporter, anaerobic K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VCM66_1143 sfcA; malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VCM66_1232 transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VCM66_A0633 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VCM66_A0632 narP; nitrate/nitrite response regulator NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VCM66_2576 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCM66_2577 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCM66_2578 frdC; fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VCM66_2579 frdD; fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VCM66_A0642 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VCM66_A0665 putative regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VCM66_A0641 uhpB; sensor protein UhpB K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D VCM66_A0640 uhpA; transcriptional regulator UhpA K20264 fusR; two-component system, NarL family, response regulator FusR
D VCM66_2376 sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VCM66_1168 transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VCM66_0506 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D VCM66_1592 vieS; sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VCM66_2185 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D VCM66_2162 glnB-2; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D VCM66_2668 ntrB; nitrogen regulation protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VCM66_2669 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VCM66_2666 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_A0664 putative phosphoglycerate transport regulatory protein PgtC K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D VCM66_A0663 putative phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VCM66_A0662 phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VCM66_1849 dctB; putative C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCM66_1850 dctD-1; putative C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VCM66_A0140 dctD-2; C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VCM66_2450 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VCM66_2346 pilA; fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D VCM66_A1048 cheR-3; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_1354 cheR-1; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_2124 cheR-2; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_0267 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1253 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0204 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0098 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0434 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1203 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1244 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1268 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1349 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_2084 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1358 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1361 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1368 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1582 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1477 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1782 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1791 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1822 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_2362 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0172 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0008 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0934 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0939 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0264 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0621 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0732 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0823 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0883 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0989 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0992 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1027 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1014 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1045 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1049 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0616 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCM66_A0947 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCM66_A1050 cheW-2; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_A1051 cheW-3; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1357 putative purine-binding chemotaxis protein Chew K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1983 cheW-1; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1984 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_A1052 cheA-3; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1352 cheA-1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1987 cheA-2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_A1053 cheY-4; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1271 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1350 cheY-1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1353 cheY-2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1989 cheY-3; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1038 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_A1046 cheB-3; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_1356 cheB-1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_1986 cheB-2; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_A0914 putative chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_1930 cheV-2; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_1542 cheV-1; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_2125 cheV-3; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_A0695 luxP; luxP protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VCM66_A0694 luxQ; sensor histidine kinase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCM66_A0481 luxN; sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCM66_0977 luxU; phosphorelay protein K10911 luxU; two-component system, phosphorelay protein LuxU
D VCM66_0976 luxO; LuxO repressor protein K10912 luxO; two-component system, repressor protein LuxO
D VCM66_0541 hapR; hemagglutinin/protease regulatory protein K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VCM66_1853 dctP-2; C4-dicarboxylate-binding periplasmic protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D VCM66_1852 putative C4-dicarboxylate transport protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VCM66_1851 dctM; putative C4-dicarboxylate transport protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VCM66_2060 flrA; flagellar regulatory protein A K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCM66_2059 flrB; flagellar regulatory protein B K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCM66_2058 flrC; flagellar regulatory protein C K10943 flrC; two-component system, response regulator FlrC
D VCM66_2534 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VCM66_0439 glutaminase family protein K01425 glsA; glutaminase [EC:3.5.1.2]
D VCM66_0531 petA; ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VCM66_0532 petB; ubiquinol--cytochrome c reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VCM66_0533 petC; ubiquinol--cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VCM66_1398 ccoN; cytochrome c oxidase, subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VCM66_1397 ccoO; cytochrome c oxidase, subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VCM66_1396 ccoQ; cytochrome c oxidase, subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VCM66_1395 ccoP; cytochrome c oxidase, subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VCM66_1767 cydA-1; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCM66_1511 qxtA; quinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCM66_A0831 cydA-2; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCM66_1766 cydB-1; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCM66_1510 qxtB; quinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCM66_A0832 cydB-2; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCM66_1765 conserved hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D VCM66_1404 rtxB; RTX toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D VCM66_1403 rtxD; RTX toxin transporter K12532 rtxD; membrane fusion protein, RTX toxin transport system
D VCM66_1402 putative toxin secretion transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D VCM66_2359 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1505 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_0996 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VCM66_0874 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VCM66_0875 epsD; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VCM66_1036 Hpt family protein K20976 hptB; histidine phosphotransfer protein HptB
D VCM66_A1043 response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D VCM66_A1044 putative anti-sigma F factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D VCM66_2127 putative negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:vcm04148]
D VCM66_A1021 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VCM66_0531 petA; ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vcm02024]
D VCM66_0515 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VCM66_A0695 luxP; luxP protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VCM66_A0694 luxQ; sensor histidine kinase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCM66_A0482 aminotransferase, class II K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VCM66_A0481 luxN; sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCM66_0977 luxU; phosphorelay protein K10911 luxU; two-component system, phosphorelay protein LuxU
D VCM66_0976 luxO; LuxO repressor protein K10912 luxO; two-component system, repressor protein LuxO
D VCM66_0331 putative host factor I protein K03666 hfq; host factor-I protein
D VCM66_0541 hapR; hemagglutinin/protease regulatory protein K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VCM66_2567 aphA; conserved hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VCM66_1129 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VCM66_1128 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VCM66_A0994 phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCM66_0653 aroF; tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCM66_1449 aroH; trp-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCM66_A1061 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VCM66_A1062 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VCM66_A0491 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VCM66_A0641 uhpB; sensor protein UhpB K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D VCM66_A0640 uhpA; transcriptional regulator UhpA K20264 fusR; two-component system, NarL family, response regulator FusR
D VCM66_1560 RTX toxin K20276 bapA; large repetitive protein
D VCM66_1909 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2406 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2264 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_0237 rfbL; rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2534 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VCM66_0362 putative zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VCM66_1218 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VCM66_2194 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VCM66_1047 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VCM66_1048 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VCM66_1049 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VCM66_1050 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VCM66_A0937 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCM66_1051 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCM66_A1055 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCM66_0170 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCM66_0578 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCM66_A1056 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCM66_0171 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCM66_0577 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCM66_A1057 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCM66_0172 peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCM66_0576 peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCM66_0575 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCM66_A1058 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCM66_0169 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCM66_0574 peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VCM66_0004 yidC; putative Inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCM66_0156 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VCM66_0306 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VCM66_0598 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VCM66_2496 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VCM66_0700 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D VCM66_2317 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VCM66_0147 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VCM66_2573 secB; protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VCM66_0518 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae [PATH:vcm05111]
D VCM66_0515 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VCM66_A0694 luxQ; sensor histidine kinase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCM66_A0695 luxP; luxP protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VCM66_A0482 aminotransferase, class II K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VCM66_A0481 luxN; sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCM66_0977 luxU; phosphorelay protein K10911 luxU; two-component system, phosphorelay protein LuxU
D VCM66_0976 luxO; LuxO repressor protein K10912 luxO; two-component system, repressor protein LuxO
D VCM66_0331 putative host factor I protein K03666 hfq; host factor-I protein
D VCM66_2567 aphA; conserved hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VCM66_1004 transcriptional regulator, LysR family K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VCM66_A0912 transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VCM66_0623 sigma-54 dependent transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VCM66_0873 phosphotyrosine protein phosphatase K20945 vpsU; tyrosine-protein phosphatase [EC:3.1.3.48]
D VCM66_0874 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VCM66_0875 epsD; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VCM66_0880 serine acetyltransferase-related protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_2569 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_0876 serine acetyltransferase-related protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCM66_0877 putative exopolysaccharide biosynthesis protein K20921 vpsD; polysaccharide biosynthesis protein VpsD
D VCM66_0878 putative polysaccharide export protein K20946 vpsE; polysaccharide biosynthesis protein VpsE
D VCM66_0879 conserved hypothetical protein K20947 vpsF; polysaccharide biosynthesis protein VpsF
D VCM66_0882 putative polysaccharide biosynthesis protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D VCM66_0883 conserved hypothetical protein K20948 vpsJ; polysaccharide biosynthesis protein VpsJ
D VCM66_0884 cpsF; UDP-N-acetyl-D-mannosamine transferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D VCM66_0890 putative capsular polysaccharide biosynthesis glycosyltransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VCM66_0891 conserved hypothetical protein K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VCM66_0892 polysaccharide export-related protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VCM66_0893 putative exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VCM66_0894 conserved hypothetical protein K20949 vpsP; polysaccharide biosynthesis protein VpsP
D VCM66_0895 conserved hypothetical protein K20950 vpsQ; polysaccharide biosynthesis protein VpsQ
D VCM66_2654 epsC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VCM66_2653 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VCM66_2652 epsE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VCM66_2651 epsF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VCM66_2650 epsG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VCM66_2649 epsH; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VCM66_2648 epsI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VCM66_2647 epsJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VCM66_2646 epsK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VCM66_2645 epsL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VCM66_2644 epsM; cholera toxin secretion protein EpsM K02462 gspM; general secretion pathway protein M
D VCM66_2643 epsN; general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VCM66_1812 hemolysin-related protein K20951 bap1; extracellular matrix protein
D VCM66_0887 hemolysin-related protein K20952 rbmC; rugosity and biofilm structure modulator C
D VCM66_0885 conserved hypothetical protein K20953 rbmA; rugosity and biofilm structure modulator A
D VCM66_0783 tcpP; toxin co-regulated pilus biosynthesis protein P K10920 tcpP; toxin coregulated pilus biosynthesis protein P
D VCM66_0784 tcpH; toxin co-regulated pilus biosynthesis protein H K10919 tcpH; toxin coregulated pilus biosynthesis protein H
D VCM66_0940 toxR; cholera toxin transcriptional activator K10921 toxR; cholera toxin transcriptional activator
D VCM66_0939 toxS; regulatory protein ToxS K10922 toxS; transmembrane regulatory protein ToxS
D VCM66_0795 TCP pilus virulence regulatory protein K10923 tcpN; AraC family transcriptional regulator, TCP pilus virulence regulatory protein
D VCM66_1777 ompT; ompT protein K10940 ompT; outer membrane protein OmpT
D VCM66_0591 ompU; outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VCM66_0785 tcpA; toxin co-regulated pilin K10930 tcpA; toxin coregulated pilin
D VCM66_0786 tcpB; toxin co-regulated pilus biosynthesis protein B K10931 tcpB; toxin coregulated pilus biosynthesis protein B
D VCM66_0788 tcpC; toxin co-regulated pilus biosynthesis outer membrane protein C K10932 tcpC; toxin coregulated pilus biosynthesis outer membrane protein C
D VCM66_0790 tcpD; toxin co-regulated pilus biosynthesis protein D K10933 tcpD; toxin coregulated pilus biosynthesis protein D
D VCM66_0793 tcpE; toxin co-regulated pilus biosynthesis protein E K10934 tcpE; toxin coregulated pilus biosynthesis protein E
D VCM66_0794 tcpF; toxin co-regulated pilus biosynthesis protein F K10935 tcpF; toxin coregulated pilus biosynthesis protein F
D VCM66_0782 tcpI; toxin co-regulated pilus biosynthesis protein I K10961 tcpI; toxin coregulated pilus biosynthesis protein I
D VCM66_0787 tcpQ; toxin co-regulated pilus biosynthesis protein Q K10962 tcpQ; toxin coregulated pilus biosynthesis protein Q
D VCM66_0789 tcpR; toxin co-regulated pilus biosynthesis protein R K10963 tcpR; toxin coregulated pilus biosynthesis protein R
D VCM66_0791 tcpS; toxin co-regulated pilus biosynthesis protein S K10964 tcpS; toxin coregulated pilus biosynthesis protein S
D VCM66_0792 tcpT; toxin co-regulated pilus biosynthesis protein T K10965 tcpT; toxin coregulated pilus biosynthesis protein T
D VCM66_0801 acfA; accessory colonization factor AcfA K10936 acfA; accessory colonization factor AcfA
D VCM66_0797 acfB; accessory colonization factor AcfB K10937 acfB; accessory colonization factor AcfB
D VCM66_0798 acfC; accessory colonization factor AcfC K10938 acfC; accessory colonization factor AcfC
D VCM66_0802 putative lipoprotein K10939 acfD; accessory colonization factor AcfD
D VCM66_0541 hapR; hemagglutinin/protease regulatory protein K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VCM66_A0824 hap; hemagglutinin/protease K08604 hap; vibriolysin [EC:3.4.24.25]
D VCM66_2376 sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VCM66_1168 transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VCM66_0506 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D VCM66_0920 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCM66_1937 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VCM66_0122 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VCM66_2534 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VCM66_0275 fis; factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VCM66_1533 GGDEF family protein K20954 acgB; diguanylate cyclase [EC:2.7.7.65]
D VCM66_1060 GGDEF family protein K20955 cdgK; diguanylate cyclase [EC:2.7.7.65]
D VCM66_1022 GGDEF family protein K20957 cdgH; diguanylate cyclase [EC:2.7.7.65]
D VCM66_2208 GGDEF family protein K20958 cdgL; diguanylate cyclase [EC:2.7.7.65]
D VCM66_1331 GGDEF family protein K20959 cdgM; diguanylate cyclase [EC:2.7.7.65]
D VCM66_A0899 sensory box/GGDEF family protein K20960 K20960; diguanylate cyclase [EC:2.7.7.65]
D VCM66_2377 vpvC; GGDEF family protein K20961 vpvC; diguanylate cyclase [EC:2.7.7.65]
D VCM66_A0744 GGDEF family protein K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCM66_1532 EAL family protein K20963 acgA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCM66_1591 vieA; response regulator VieA K13246 vieA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCM66_0137 HD-GYP/EAL family protein K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCM66_0130 GGDEF/EAL family protein K20964 cdpA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCM66_0611 c-di-GMP phosphodiesterase A-related protein K20965 rocS; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCM66_0661 mbaA; c-di-GMP phosphodiesterase A-related protein K20966 mbaA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCM66_0390 mshE; MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VCM66_0394 mshA; MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VCM66_0393 mshB; MSHA pilin protein MshB K10925 mshB; MSHA pilin protein MshB
D VCM66_0395 mshC; MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC
D VCM66_0396 mshD; MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VCM66_2060 flrA; flagellar regulatory protein A K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCM66_2450 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VCM66_0492 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VCM66_2059 flrB; flagellar regulatory protein B K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCM66_2058 flrC; flagellar regulatory protein C K10943 flrC; two-component system, response regulator FlrC
D VCM66_1990 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vcm02030]
D VCM66_0267 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1253 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0204 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0098 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0434 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1203 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1244 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1268 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1349 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_2084 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1358 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1361 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1368 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1582 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1477 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1782 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1791 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1822 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_2362 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0172 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0008 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0934 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0939 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0264 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0621 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0732 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0823 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0883 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0989 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0992 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1027 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1014 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1045 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1049 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0616 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCM66_A0947 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCM66_A0905 malE; maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VCM66_A0128 rbsB; ribose ABC transporter, periplasmic D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D VCM66_1280 mglB; galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VCM66_A1052 cheA-3; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1352 cheA-1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1987 cheA-2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_A1050 cheW-2; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_A1051 cheW-3; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1357 putative purine-binding chemotaxis protein Chew K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1983 cheW-1; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1984 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_A1053 cheY-4; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1271 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1350 cheY-1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1353 cheY-2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1989 cheY-3; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1038 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1039 conserved hypothetical protein K03410 cheC; chemotaxis protein CheC
D VCM66_1988 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D VCM66_0361 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D VCM66_A1046 cheB-3; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_1356 cheB-1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_1986 cheB-2; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_A0914 putative chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_1930 cheV-2; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_1542 cheV-1; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_2125 cheV-3; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_A1047 putative chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D VCM66_A1048 cheR-3; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_1354 cheR-1; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_2124 cheR-2; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_2055 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VCM66_2049 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VCM66_2048 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VCM66_0849 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D VCM66_0850 pomB; chemotaxis protein PomB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vcm02040]
D VCM66_2057 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VCM66_2056 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VCM66_2055 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VCM66_2054 putative flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VCM66_2053 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VCM66_2052 putative flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D VCM66_2051 putative flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VCM66_0097 putative flagellar protein FliL K02415 fliL; flagellar protein FliL
D VCM66_2050 putative flagellar protein FliL K02415 fliL; flagellar protein FliL
D VCM66_2049 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VCM66_2048 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VCM66_2047 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VCM66_2046 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VCM66_2045 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VCM66_2044 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VCM66_1993 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VCM66_2043 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VCM66_2126 flagellar protein, putative K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VCM66_2123 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VCM66_2122 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VCM66_2121 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VCM66_2120 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VCM66_2119 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VCM66_2118 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VCM66_2117 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VCM66_2116 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VCM66_2115 flgJ; flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D VCM66_2114 flgM; flagellar hook-associated protein FlgM K02396 flgK; flagellar hook-associated protein 1
D VCM66_2113 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VCM66_2130 conserved hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D VCM66_2129 conserved hypothetical protein K09860 flgP; outer membrane protein FlgP
D VCM66_2131 conserved hypothetical protein K24343 flgT; flagellar H-ring protein FlgT
D VCM66_2521 motX; sodium-type flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VCM66_0964 motY; sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VCM66_2065 flaB; flagellin FlaB K02406 fliC; flagellin
D VCM66_2066 flaD; flagellin FlaD K02406 fliC; flagellin
D VCM66_2067 flaE; flagellin FlaE K02406 fliC; flagellin
D VCM66_2110 flaC; flagellin FlaC K02406 fliC; flagellin
D VCM66_2111 flaA; flagellin core protein A K02406 fliC; flagellin
D VCM66_2063 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VCM66_2061 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VCM66_0849 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D VCM66_0850 pomB; chemotaxis protein PomB K02557 motB; chemotaxis protein MotB
D VCM66_2127 putative negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VCM66_2128 conserved hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D VCM66_0475 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VCM66_2060 flrA; flagellar regulatory protein A K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCM66_2450 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VCM66_2058 flrC; flagellar regulatory protein C K10943 flrC; two-component system, response regulator FlrC
D VCM66_1990 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D VCM66_2370 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D VCM66_0375 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection [PATH:vcm05110]
D VCM66_A0215 hlyA; hemolysin K10948 hlyA; hemolysin
D VCM66_1722 nanH; neuraminidase K23550 nanH; sialidase [EC:3.2.1.18]
D VCM66_1407 rtxA; RTX toxin RtxA K10953 rtxA; RTX toxin RtxA
D VCM66_0785 tcpA; toxin co-regulated pilin K10930 tcpA; toxin coregulated pilin
D VCM66_0786 tcpB; toxin co-regulated pilus biosynthesis protein B K10931 tcpB; toxin coregulated pilus biosynthesis protein B
D VCM66_0788 tcpC; toxin co-regulated pilus biosynthesis outer membrane protein C K10932 tcpC; toxin coregulated pilus biosynthesis outer membrane protein C
D VCM66_0790 tcpD; toxin co-regulated pilus biosynthesis protein D K10933 tcpD; toxin coregulated pilus biosynthesis protein D
D VCM66_0793 tcpE; toxin co-regulated pilus biosynthesis protein E K10934 tcpE; toxin coregulated pilus biosynthesis protein E
D VCM66_0794 tcpF; toxin co-regulated pilus biosynthesis protein F K10935 tcpF; toxin coregulated pilus biosynthesis protein F
D VCM66_A0770 putative chitinase K21712 gbpA; N-acetylglucosamine-binding protein A
D VCM66_A0824 hap; hemagglutinin/protease K08604 hap; vibriolysin [EC:3.4.24.25]
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vcm01501]
D VCM66_0591 ompU; outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VCM66_2223 putative ampG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VCM66_0650 exoII; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VCM66_1047 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VCM66_1048 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VCM66_1049 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VCM66_1050 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VCM66_A0937 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCM66_1051 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCM66_0165 transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VCM66_0164 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0870 Multidrug resistance protein mdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0163 putative multidrug resistance protein K18138 acrB; multidrug efflux pump
D VCM66_2359 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1505 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_2555 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VCM66_0906 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VCM66_2330 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:vcm01502]
D VCM66_A0531 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VCM66_0356 alr; alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VCM66_2328 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VCM66_2327 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VCM66_2324 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vcm01503]
D VCM66_A1059 conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VCM66_1620 sapA; peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VCM66_1621 sapB; peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D VCM66_1622 sapC; peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D VCM66_1623 sapD; peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VCM66_1624 sapF; peptide ABC transporter, ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D VCM66_2613 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VCM66_2612 cpxR; transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VCM66_0328 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VCM66_A0055 conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VCM66_0524 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D VCM66_0034 tpcG; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VCM66_2222 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VCM66_0164 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0870 Multidrug resistance protein mdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0163 putative multidrug resistance protein K18138 acrB; multidrug efflux pump
D VCM66_2359 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1505 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_2171 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vcm01000]
C 01001 Protein kinases [BR:vcm01001]
D VCM66_0773 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCM66_0893 putative exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VCM66_0678 phoR; histidine protein kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VCM66_2633 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VCM66_1274 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VCM66_2613 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VCM66_A1061 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VCM66_A0490 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VCM66_A0667 torS; sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VCM66_2292 fexB; sensor histidine kinase FexB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VCM66_A0633 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VCM66_A0641 uhpB; sensor protein UhpB K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D VCM66_2376 sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VCM66_1592 vieS; sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VCM66_1231 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VCM66_0749 citA; sensor kinase citA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VCM66_1545 putative sensor kinase citA K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VCM66_0652 GAF/HisKin family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VCM66_2668 ntrB; nitrogen regulation protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VCM66_A0663 putative phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VCM66_1849 dctB; putative C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCM66_1463 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VCM66_1040 sensory box sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VCM66_A1052 cheA-3; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1352 cheA-1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1987 cheA-2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_A0694 luxQ; sensor histidine kinase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCM66_A0481 luxN; sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCM66_2059 flrB; flagellar regulatory protein B K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCM66_0580 sensory box sensor histidine kinase/response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS
C 01009 Protein phosphatases and associated proteins [BR:vcm01009]
D VCM66_2609 pfkA; 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCM66_0941 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VCM66_2268 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vcm01002]
D VCM66_0641 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D VCM66_2349 pilD; leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VCM66_0796 tcpJ; leader peptidase TcpJ K10966 tcpJ; toxin coregulated pilus biosynthesis protein J [EC:3.4.23.43 2.1.1.-]
D VCM66_0726 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VCM66_1478 nlpC; lipoprotein NlpC K13695 nlpC; probable lipoprotein NlpC
D VCM66_0960 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VCM66_2296 gltB-1; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCM66_2299 gltB-2; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCM66_0472 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VCM66_0947 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VCM66_2231 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D VCM66_A0055 conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VCM66_1223 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D VCM66_1030 conserved hypothetical protein K07052 K07052; CAAX protease family protein
D VCM66_1437 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VCM66_0176 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D VCM66_A0824 hap; hemagglutinin/protease K08604 hap; vibriolysin [EC:3.4.24.25]
D VCM66_A0219 prtV; protease K09607 ina; immune inhibitor A [EC:3.4.24.-]
D VCM66_1589 vcc; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D VCM66_1649 zinc protease, insulinase family K07263 pqqL; zinc protease [EC:3.4.24.-]
D VCM66_0512 protease, insulinase family/protease, insulinase family K07263 pqqL; zinc protease [EC:3.4.24.-]
D VCM66_2423 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VCM66_0713 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VCM66_2075 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VCM66_A0176 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VCM66_1298 peptidase, M20A family K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VCM66_2202 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VCM66_A0077 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VCM66_2184 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D VCM66_0067 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VCM66_A0772 aminopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D VCM66_1369 thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D VCM66_0595 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VCM66_1073 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D VCM66_2087 conserved hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D VCM66_2176 conserved hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D VCM66_0524 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D VCM66_0523 degS; protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D VCM66_0156 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VCM66_A0060 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VCM66_0903 dacA-1; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCM66_A0266 dacA-2; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCM66_A0829 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D VCM66_0590 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VCM66_1846 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D VCM66_1844 lon; ATP-dependent protease LA K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D VCM66_1425 ATP-dependent protease LA-related protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D VCM66_0092 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D VCM66_2385 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VCM66_1439 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VCM66_A0043 putative tricorn protease K08676 tri; tricorn protease [EC:3.4.21.-]
D VCM66_1918 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D VCM66_1015 sohB protein, peptidase U7 family K04774 sohB; serine protease SohB [EC:3.4.21.-]
D VCM66_0099 glpG; glpG protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D VCM66_A0369 microcin immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D VCM66_2595 hslV; protease HslVU, subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D VCM66_2523 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VCM66_A0517 putative gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D VCM66_0675 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VCM66_0609 conserved hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D VCM66_0610 putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D VCM66_2456 pmbA; pmbA protein K03592 pmbA; PmbA protein
D VCM66_0407 tldD; tldD protein K03568 tldD; TldD protein
D VCM66_0334 hflC; hflC protein K04087 hflC; modulator of FtsH protease HflC
D VCM66_0333 hflK; hflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vcm01003]
D VCM66_1666 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D VCM66_0560 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VCM66_2555 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VCM66_0877 putative exopolysaccharide biosynthesis protein K20921 vpsD; polysaccharide biosynthesis protein VpsD
D VCM66_0882 putative polysaccharide biosynthesis protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D VCM66_0884 cpsF; UDP-N-acetyl-D-mannosamine transferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vcm01005]
D VCM66_2171 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VCM66_2170 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VCM66_2319 envA; UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VCM66_2173 lpxD; UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VCM66_1773 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VCM66_1801 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VCM66_0201 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VCM66_1790 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VCM66_0221 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VCM66_A1059 conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VCM66_0215 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VCM66_2098 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VCM66_1799 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VCM66_2446 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D VCM66_2445 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VCM66_0212 putative lipopolysaccharide biosynthesis glycosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D VCM66_0224 rfaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VCM66_0225 conserved hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D VCM66_0213 putative lipopolysaccharide biosynthesis protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D VCM66_2153 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VCM66_0865 histidinol phosphatase-related protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VCM66_2360 sugar kinase, pfkB family K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VCM66_0228 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VCM66_0248 putative galactosyl-transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vcm01011]
D VCM66_2436 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VCM66_0302 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VCM66_2323 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VCM66_2326 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VCM66_2329 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VCM66_A0531 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VCM66_0356 alr; alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VCM66_0157 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VCM66_A0369 microcin immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D VCM66_2327 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VCM66_2324 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VCM66_0484 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCM66_2410 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCM66_0638 mviN; MviN protein K03980 murJ; putative peptidoglycan lipid II flippase
D VCM66_2555 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VCM66_0560 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VCM66_0906 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VCM66_2330 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VCM66_0903 dacA-1; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCM66_A0266 dacA-2; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCM66_0590 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VCM66_A0829 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D VCM66_A0055 conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VCM66_1223 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D VCM66_A0077 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VCM66_2235 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D VCM66_1880 putative lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D VCM66_0435 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D VCM66_2160 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D VCM66_0823 transglycosylase, Slt family K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D VCM66_1941 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D VCM66_0904 putative rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VCM66_0328 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VCM66_2344 ampD; ampD protein K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D VCM66_A0056 lpp; major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:vcm01004]
D VCM66_1946 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VCM66_A0710 fabH-2; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VCM66_1947 fabH-1; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VCM66_2032 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VCM66_1943 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VCM66_1945 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VCM66_1426 fabA; 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VCM66_2172 fabZ; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VCM66_1678 hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCM66_A0743 putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCM66_A0742 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VCM66_1018 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VCM66_1641 Acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D VCM66_0283 acs-1; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCM66_1295 prpE; prpE protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VCM66_A0788 acs-2; acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VCM66_1909 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2406 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2264 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_0237 rfbL; rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_0093 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VCM66_1948 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VCM66_0481 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VCM66_2435 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:vcm01008]
D VCM66_0729 vibB; vibriobactin-specific isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D VCM66_0738 vibD; vibriobactin synthase component D K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D VCM66_0730 vibE; vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D VCM66_1519 enterobactin synthetase component F-related protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D VCM66_2132 vibF; nonribosomal peptide synthetase VibF K12237 vibF; nonribosomal peptide synthetase VibF
D VCM66_0733 vibH; vibriobactin synthetase, amide synthase subunit VibH K04778 vibH; vibriobactin synthetase
C 01006 Prenyltransferases [BR:vcm01006]
D VCM66_0847 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VCM66_0419 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VCM66_2179 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VCM66_0330 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VCM66_2593 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VCM66_0094 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:vcm01007]
D VCM66_2137 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCM66_0953 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VCM66_0553 glutamyl-tRNA synthetase-related protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VCM66_0589 tyrS-2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCM66_0450 tyrS-1; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCM66_2543 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VCM66_1771 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VCM66_1998 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VCM66_0991 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VCM66_0640 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VCM66_2425 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VCM66_0912 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VCM66_0622 lysU; heat inducible lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VCM66_1121 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VCM66_1252 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VCM66_0718 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VCM66_0021 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VCM66_0020 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VCM66_1066 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VCM66_0832 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VCM66_A0286 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VCM66_0503 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCM66_0722 conserved hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCM66_1174 pheS; phenylalanyl-tRNA synthetase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VCM66_1175 pheT; phenylalanyl-tRNA synthetase, beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VCM66_A0472 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCM66_0019 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VCM66_1901 putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VCM66_1248 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCM66_1090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCM66_A0846 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VCM66_1069 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VCM66_2538 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VCM66_A0783 ectB; diaminobutyrate--pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VCM66_1565 aminotransferase, class III/decarboxylase, group II K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VCM66_1067 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VCM66_0584 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VCM66_0029 ilvE; branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCM66_A0562 phnW; 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VCM66_0377 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCM66_1114 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VCM66_0232 rfbE; perosamine synthase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vcm00194]
D VCM66_2683 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VCM66_2684 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VCM66_2685 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VCM66_2686 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VCM66_2687 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VCM66_2688 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VCM66_2689 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VCM66_2690 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VCM66_2691 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vcm03000]
D VCM66_A0194 putative site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCM66_0795 TCP pilus virulence regulatory protein K10923 tcpN; AraC family transcriptional regulator, TCP pilus virulence regulatory protein
D VCM66_2004 transcriptional regulator, AraC/XylS family K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D VCM66_A0977 ada; ada regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VCM66_0853 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VCM66_0160 ilvY; transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D VCM66_1646 metR; transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D VCM66_1520 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VCM66_0635 nhaR; transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VCM66_0690 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VCM66_2556 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VCM66_0467 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VCM66_2407 transcriptional regulator, LysR family K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D VCM66_1004 transcriptional regulator, LysR family K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VCM66_1831 cysB; cys regulon transcriptional activator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D VCM66_A0835 dsdC; D-serine deaminase activator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D VCM66_A0979 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D VCM66_A0900 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VCM66_1494 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VCM66_A0243 transcriptional regulator, DeoR family K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D VCM66_1498 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VCM66_2260 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VCM66_A0130 rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VCM66_2597 transcriptional repressor, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D VCM66_A0478 fruR; fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D VCM66_A0612 putative sucrose operon repressor ScrR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D VCM66_0866 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D VCM66_1661 transcriptional regulator, LacI family K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D VCM66_0274 gntR; gluconate utilization system gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D VCM66_1161 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D VCM66_1824 fadR; fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D VCM66_2338 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VCM66_0165 transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VCM66_0202 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VCM66_0541 hapR; hemagglutinin/protease regulatory protein K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VCM66_1685 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D VCM66_A0545 conserved hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VCM66_0152 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D VCM66_0071 asnC; transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D VCM66_1828 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCM66_A1026 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCM66_1653 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCM66_1017 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D VCM66_0381 transcriptional regulator, LuxR family K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D VCM66_A0912 transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VCM66_A0011 malT; malT regulatory protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D VCM66_A0964 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D VCM66_0930 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VCM66_0262 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D VCM66_A0082 soxR; soxR protein K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D VCM66_A0053 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D VCM66_2029 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VCM66_0362 putative zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VCM66_2534 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VCM66_1390 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D VCM66_0705 conserved hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D VCM66_1024 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VCM66_0636 hlyU; transcriptional activator HlyU K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D VCM66_1892 transcriptional regulator, HTH_3 family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D VCM66_2567 aphA; conserved hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VCM66_0192 Putative HTH-type transcriptional regulator yfeT K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D VCM66_1104 HTH-type transcriptional regulator hexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D VCM66_0303 birA; birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VCM66_0275 fis; factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VCM66_0659 putative trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D VCM66_A0537 conserved hypothetical protein K11925 sgrR; SgrR family transcriptional regulator
D VCM66_2060 flrA; flagellar regulatory protein A K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCM66_0623 sigma-54 dependent transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VCM66_1740 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VCM66_A0115 sigma-54 dependent transcriptional regulator K11908 vasH; sigma-54 dependent transcriptional regulator
D VCM66_A0178 sigma-54 dependent transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D VCM66_A0865 conserved hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D VCM66_A0431 virulence gene repressor RsaL K07726 K07726; putative transcriptional regulator
D VCM66_2602 metJ; met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D VCM66_A1031 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VCM66_2219 bolA; bolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D VCM66_2692 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCM66_A1070 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCM66_0946 putative transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D VCM66_0416 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D VCM66_0949 nagC; N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor
D VCM66_1931 transcriptional regulator, ROK family K15545 mlc; transcriptional regulator of PTS gene
D VCM66_A1005 mtlR; mannitol operon repressor K02562 mtlR; mannitol operon repressor
D VCM66_1263 tyrR; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D VCM66_0263 putative transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon
D VCM66_2082 putative glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D VCM66_1619 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D VCM66_1616 pspC; phage shock protein C K03973 pspC; phage shock protein C
D VCM66_A0565 regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D VCM66_1723 transcriptional regulator K07733 alpA; prophage regulatory protein
D VCM66_1732 putative transcriptional regulator K07733 alpA; prophage regulatory protein
D VCM66_0452 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D VCM66_0554 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D VCM66_2195 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D VCM66_2198 crl; transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
C 03021 Transcription machinery [BR:vcm03021]
D VCM66_2491 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VCM66_0312 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VCM66_0313 rpoC; DNA-directed RNA polymerase, beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VCM66_2629 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VCM66_0475 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VCM66_0492 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VCM66_1000 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VCM66_2225 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VCM66_2390 rpoE; RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VCM66_0150 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D VCM66_2450 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VCM66_1990 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D VCM66_2428 hepA; RNA polymerase-associated protein HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D VCM66_0600 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D VCM66_2190 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D VCM66_0307 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VCM66_0534 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D VCM66_0535 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D VCM66_2389 rseA; sigma-E factor negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D VCM66_2388 rseB; sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D VCM66_2387 rseC; sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D VCM66_0554 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D VCM66_0592 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D VCM66_2635 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D VCM66_0292 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VCM66_A0908 conserved hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:vcm03019]
D VCM66_1954 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VCM66_0404 cafA; cytoplasmic axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D VCM66_2384 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VCM66_2519 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VCM66_0325 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VCM66_0290 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VCM66_A0727 ATP-dependent RNA helicase, DEAD box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCM66_A0200 rhlE-2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCM66_1362 rhlE-1; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCM66_A0763 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VCM66_0184 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VCM66_2370 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCM66_0605 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VCM66_0292 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VCM66_2609 pfkA; 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCM66_0812 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D VCM66_A0779 groEL-2; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_2584 groEL-1; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_0331 putative host factor I protein K03666 hfq; host factor-I protein
D VCM66_0681 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VCM66_0686 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VCM66_0552 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D VCM66_0629 MutT/nudix family protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VCM66_0506 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D VCM66_0383 mshH; MSHA biogenesis protein MshH K18765 csrD; RNase E specificity factor CsrD
D VCM66_2592 menG-2; s-adenosylmethionine:2-demethylmenaquinone methyltransferase K02553 rraA; regulator of ribonuclease activity A
D VCM66_2289 menG-1; s-adenosylmethionine:2-demethylmenaquinone methyltransferase K02553 rraA; regulator of ribonuclease activity A
D VCM66_0409 conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D VCM66_2453 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D VCM66_1337 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vcm03011]
D VCM66_1839 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D VCM66_2183 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D VCM66_2510 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D VCM66_2492 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D VCM66_2499 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D VCM66_0350 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D VCM66_0344 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D VCM66_2502 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D VCM66_0529 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D VCM66_2517 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D VCM66_2493 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D VCM66_0343 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D VCM66_2494 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D VCM66_2503 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D VCM66_0604 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D VCM66_0519 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D VCM66_2507 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D VCM66_0352 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D VCM66_2512 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D VCM66_0637 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D VCM66_0478 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D VCM66_0309 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D VCM66_2513 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D VCM66_2516 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D VCM66_2515 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D VCM66_2504 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D VCM66_2501 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D VCM66_0353 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D VCM66_0310 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D VCM66_0308 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D VCM66_0311 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VCM66_0528 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D VCM66_2506 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D VCM66_2497 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D VCM66_2509 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D VCM66_2490 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D VCM66_2500 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D VCM66_0522 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D VCM66_A0289 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D VCM66_0420 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D VCM66_2511 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D VCM66_2514 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D VCM66_2505 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D VCM66_0421 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D VCM66_0206 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D VCM66_2508 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D VCM66_2498 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D VCM66_0835 ribosomal protein, L31P family K02909 RP-L31; large subunit ribosomal protein L31
D VCM66_2599 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VCM66_1949 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D VCM66_0207 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D VCM66_0007 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D VCM66_A0288 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D VCM66_0836 putative ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D VCM66_2495 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D VCM66_1579 rplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D VCM66_5S01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S05 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_16S01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S05 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_23S01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S07 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S06 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:vcm03009]
D VCM66_2384 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VCM66_0325 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VCM66_2383 era; GTP-binding protein Era K03595 era; GTPase
D VCM66_0422 GTP1/Obg family protein K03979 obgE; GTPase [EC:3.6.5.-]
D VCM66_0554 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D VCM66_0600 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D VCM66_2190 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D VCM66_0307 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VCM66_1574 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D VCM66_0428 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D VCM66_0044 sun; sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D VCM66_0581 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D VCM66_0146 Putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D VCM66_0454 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D VCM66_1445 Sun/nucleolar protein family protein K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D VCM66_2694 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VCM66_2332 S-adenosyl-methyltransferase mraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D VCM66_0540 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D VCM66_0073 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D VCM66_1927 rrmA; rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D VCM66_2518 RNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D VCM66_0594 ftsJ; cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D VCM66_1554 conserved hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D VCM66_2220 Putative ribosomal RNA small subunit methyltransferase D K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D VCM66_0907 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D VCM66_1309 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VCM66_0175 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D VCM66_1431 conserved hypothetical protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D VCM66_0715 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D VCM66_2375 putative RNA methyltransferase,TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D VCM66_A0889 putative TrmA family RNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D VCM66_A0102 rluA-2; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCM66_2427 rluA-1; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCM66_1608 pseudouridine synthase Rlu family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCM66_1134 pseudouridine synthase family 1 protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D VCM66_1952 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D VCM66_0667 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VCM66_1096 pseudouridine synthase family 1 protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D VCM66_2146 pseudouridine synthase family 1 protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D VCM66_0615 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VCM66_1264 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D VCM66_2204 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D VCM66_1813 putative ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D VCM66_0520 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D VCM66_2540 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D VCM66_0278 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D VCM66_2041 putative adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D VCM66_1954 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VCM66_0404 cafA; cytoplasmic axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D VCM66_0451 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D VCM66_2484 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D VCM66_A0763 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VCM66_0618 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D VCM66_0324 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VCM66_0721 GTP-binding protein K03977 engA; GTPase
D VCM66_A0487 conserved hypothetical protein K14540 rbgA; ribosome biogenesis GTPase A
D VCM66_0332 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D VCM66_0054 Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VCM66_1035 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VCM66_2630 spoT; guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VCM66_0602 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D VCM66_0599 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D VCM66_A0541 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D VCM66_0908 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D VCM66_0916 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D VCM66_0593 conserved hypothetical protein K07574 yhbY; RNA-binding protein
D VCM66_A0010 conserved hypothetical protein K14762 yibL; ribosome-associated protein
D VCM66_2457 conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D VCM66_1427 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D VCM66_2451 putative sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D VCM66_0664 putative sigma-54 modulation protein K05809 raiA; ribosome-associated inhibitor A
D VCM66_2108 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D VCM66_1950 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vcm03016]
D VCM66_2369 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D VCM66_2137 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCM66_0832 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VCM66_0640 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VCM66_0912 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VCM66_0991 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VCM66_0953 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VCM66_1998 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VCM66_0622 lysU; heat inducible lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VCM66_1121 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VCM66_0503 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCM66_0722 conserved hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCM66_1252 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VCM66_A0286 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VCM66_1066 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VCM66_1771 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VCM66_2425 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VCM66_0718 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VCM66_1174 pheS; phenylalanyl-tRNA synthetase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VCM66_1175 pheT; phenylalanyl-tRNA synthetase, beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VCM66_0589 tyrS-2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCM66_0450 tyrS-1; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCM66_2543 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VCM66_2661 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D VCM66_1821 Hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VCM66_0438 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D VCM66_0833 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D VCM66_0955 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D VCM66_0603 truB; tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D VCM66_0488 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D VCM66_0706 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VCM66_0054 Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VCM66_1035 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VCM66_0330 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VCM66_0003 thdF; thiophene and furan oxidation protein ThdF K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D VCM66_2695 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VCM66_2642 cysQ; cysQ protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VCM66_0006 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D VCM66_0962 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D VCM66_0198 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D VCM66_A0764 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D VCM66_1908 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D VCM66_0656 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D VCM66_0021 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VCM66_0020 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VCM66_0553 glutamyl-tRNA synthetase-related protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VCM66_2095 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D VCM66_0821 yfhC; yfhC protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D VCM66_0363 NifR3/Smm1 family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D VCM66_0276 NifR3/Smm1 family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D VCM66_1061 conserved hypothetical protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D VCM66_0918 conserved hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D VCM66_1119 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D VCM66_1118 conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D VCM66_1657 smtA; smtA protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D VCM66_0154 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D VCM66_0521 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D VCM66_0704 RNA methyltransferase, TrmH family K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D VCM66_A0592 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D VCM66_2615 rRNA methylase, SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D VCM66_0619 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D VCM66_A1017 conserved hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D VCM66_0761 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D VCM66_0845 pseudouridine synthase Rlu family protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D VCM66_A0102 rluA-2; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCM66_2427 rluA-1; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCM66_1608 pseudouridine synthase Rlu family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCM66_1084 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VCM66_1388 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D VCM66_0024 putative Sulfurtransferase tusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VCM66_2086 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VCM66_0342 conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VCM66_0341 conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VCM66_0340 putative Sulfurtransferase tusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VCM66_1311 sulfite reductase, gamma subunit-related protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VCM66_0708 hesB family protein K13628 iscA; iron-sulfur cluster assembly protein
D VCM66_2395 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D VCM66_1834 miaE; tRNA-(MS[2]IO[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D VCM66_2033 conserved hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D VCM66_0697 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D VCM66_1321 exsB; exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VCM66_1254 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VCM66_1320 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VCM66_0859 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VCM66_0326 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D VCM66_0699 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D VCM66_0851 thiI; thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VCM66_2165 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D VCM66_A1068 conserved hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D VCM66_1913 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D VCM66_0479 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D VCM66_0327 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D VCM66_2234 HesA/MoeB/ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D VCM66_2519 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VCM66_0605 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vcm03012]
D VCM66_A0529 Sui1 family protein K03113 EIF1; translation initiation factor 1
D VCM66_0601 infB; initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D VCM66_A0287 infC; initiation factor IF3 K02520 infC; translation initiation factor IF-3
D VCM66_2528 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D VCM66_2182 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D VCM66_0305 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D VCM66_0346 tufA; elongation factor TU K02358 tuf; elongation factor Tu
D VCM66_0345 fusA-1; elongation factor G K02355 fusA; elongation factor G
D VCM66_2265 fusA-2; elongation factor G K02355 fusA; elongation factor G
D VCM66_2102 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D VCM66_2180 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D VCM66_2101 hemK; hemK protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D VCM66_2107 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D VCM66_1677 infA; initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D VCM66_2580 efp; elongation factor P K02356 efp; elongation factor P
D VCM66_1164 elongation factor P family protein K02356 efp; elongation factor P
D VCM66_2575 yjeA; lysyl-tRNA synthetase-related protein K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D VCM66_2581 conserved hypothetical protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D VCM66_2036 conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D VCM66_0621 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D VCM66_0617 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D VCM66_A0181 conserved hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:vcm03110]
D VCM66_1100 clpA; ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D VCM66_0669 clpB-1; clpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D VCM66_1845 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D VCM66_2594 hslU; protease HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D VCM66_0941 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VCM66_0812 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D VCM66_0710 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D VCM66_1341 heat shock protein 70 family protein K04046 yegD; hypothetical chaperone protein
D VCM66_A0779 groEL-2; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_2584 groEL-1; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_0813 dnaJ; dnaJ protein K03686 dnaJ; molecular chaperone DnaJ
D VCM66_0432 DnaJ-related protein K05801 djlA; DnaJ like chaperone protein
D VCM66_0709 hscB; chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VCM66_2656 Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D VCM66_0811 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VCM66_0018 ibpA; putative heat shock protein K04080 ibpA; molecular chaperone IbpA
D VCM66_2655 Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D VCM66_A0778 groES-2; chaperonin, 10 Kd subunit K04078 groES; chaperonin GroES
D VCM66_2585 groES-1; chaperonin, 10 Kd subunit K04078 groES; chaperonin GroES
D VCM66_0524 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D VCM66_0595 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VCM66_2690 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VCM66_2573 secB; protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VCM66_2611 putative periplasmic protein cpxP K06006 cpxP; periplasmic protein CpxP/Spy
D VCM66_A0036 conserved hypothetical protein K09796 pccA; periplasmic copper chaperone A
D VCM66_1660 torD; torD protein K03533 torD; TorA specific chaperone
D VCM66_0156 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VCM66_A0215 hlyA; hemolysin K10948 hlyA; hemolysin
D VCM66_2140 chb-2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCM66_0571 chb-1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCM66_2222 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VCM66_1772 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VCM66_1842 ppiD; peptidyl-prolyl cis-trans isomerse D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D VCM66_0338 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D VCM66_2488 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D VCM66_0642 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D VCM66_2524 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D VCM66_A0913 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D VCM66_0430 surA; survival protein SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D VCM66_0291 trxA; thioredoxin K03671 TXN; thioredoxin
D VCM66_A0711 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D VCM66_0933 conserved hypothetical protein K05838 ybbN; putative thioredoxin
D VCM66_1102 grxA; glutaredoxin 1 K03674 grxA; glutaredoxin 1
D VCM66_A0951 grx2; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D VCM66_1968 putative monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D VCM66_0034 tpcG; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VCM66_1826 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D VCM66_2341 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VCM66_2621 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D VCM66_1975 dsbE; thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:vcm04131]
D VCM66_0714 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VCM66_0022 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VCM66_1924 gapA-1; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCM66_A0802 gapA-2; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCM66_1932 pykA-1; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_A0666 pykA-2; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_0470 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_0941 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:vcm04121]
C 03051 Proteasome [BR:vcm03051]
D VCM66_0941 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vcm03032]
D VCM66_2157 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VCM66_A0194 putative site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCM66_0258 hupA; DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D VCM66_1843 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VCM66_1177 himA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VCM66_1838 hipB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VCM66_0012 dnaA; chromosomal DNA replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D VCM66_0355 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VCM66_0476 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VCM66_0382 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VCM66_2168 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCM66_0013 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCM66_2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCM66_0909 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCM66_1939 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCM66_0284 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_1245 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_2156 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_1009 dnaZX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCM66_0614 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCM66_2169 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VCM66_0108 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCM66_0927 ligA-1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VCM66_2546 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VCM66_2020 seqA; seqA protein K03645 seqA; negative modulator of initiation of replication
D VCM66_1213 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VCM66_0015 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VCM66_2353 parC; topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VCM66_2354 parE; topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VCM66_1670 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VCM66_1967 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vcm03036]
D VCM66_A0194 putative site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCM66_2384 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VCM66_1086 vicH; DNA-binding protein VicH K03746 hns; DNA-binding protein H-NS
D VCM66_0258 hupA; DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D VCM66_1843 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VCM66_1177 himA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VCM66_1838 hipB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VCM66_0012 dnaA; chromosomal DNA replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D VCM66_0537 putative phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D VCM66_0139 DPS family protein K04047 dps; starvation-inducible DNA-binding protein
D VCM66_0275 fis; factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VCM66_0331 putative host factor I protein K03666 hfq; host factor-I protein
D VCM66_0467 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VCM66_1828 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCM66_A1026 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCM66_1653 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCM66_1963 Nucleoid-associated protein ndpA K06899 ndpA; nucleoid-associated protein
D VCM66_1654 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB
D VCM66_1655 mukE; mukE protein K03804 mukE; chromosome partition protein MukE
D VCM66_1656 mukF; mukF protein K03633 mukF; chromosome partition protein MukF
D VCM66_2321 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VCM66_0485 ftsB; Cell division protein ftsB K05589 ftsB; cell division protein FtsB
D VCM66_0148 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VCM66_2330 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VCM66_1827 putative cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D VCM66_2331 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D VCM66_2322 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D VCM66_2325 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VCM66_0149 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VCM66_2320 ftsz; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VCM66_0926 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D VCM66_2400 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D VCM66_2606 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D VCM66_1433 conserved hypothetical protein K18657 zapC; cell division protein ZapC
D VCM66_2351 conserved hypothetical protein K18778 zapD; cell division protein ZapD
D VCM66_0526 conserved hypothetical protein K06916 zapE; cell division protein ZapE
D VCM66_2487 conserved hypothetical protein K07269 ytfB; cell division protein YtfB
D VCM66_0328 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VCM66_0164 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0870 Multidrug resistance protein mdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_1883 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VCM66_1884 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VCM66_1885 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D VCM66_1146 conserved hypothetical protein K13053 sulA; cell division inhibitor SulA
D VCM66_0202 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VCM66_2020 seqA; seqA protein K03645 seqA; negative modulator of initiation of replication
D VCM66_0400 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VCM66_0401 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D VCM66_0402 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D VCM66_0905 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VCM66_2693 ParA family protein K03496 parA; chromosome partitioning protein
D VCM66_1985 ParA family protein K03496 parA; chromosome partitioning protein
D VCM66_A1071 ParA family protein K03496 parA; chromosome partitioning protein
D VCM66_2692 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCM66_A1070 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCM66_2353 parC; topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VCM66_2354 parE; topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VCM66_2695 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VCM66_2694 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VCM66_0128 xerC; integrase/recombinase XerC K03733 xerC; integrase/recombinase XerC
D VCM66_2342 xerD; integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D VCM66_0992 mrp; mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VCM66_0111 putative GTP-binding protein engB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vcm03400]
D VCM66_A0976 ogt; methylated-DNA--protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D VCM66_A0054 phrB-2; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VCM66_1347 putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VCM66_2282 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VCM66_0437 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VCM66_0967 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VCM66_2315 mutT; mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VCM66_A0095 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VCM66_A0350 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VCM66_A0768 conserved hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D VCM66_A0977 ada; ada regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VCM66_1612 tag; DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VCM66_0209 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VCM66_1783 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VCM66_2283 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VCM66_2340 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VCM66_0927 ligA-1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VCM66_0108 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCM66_0379 uvrA; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D VCM66_0974 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VCM66_1169 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D VCM66_0178 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VCM66_0312 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VCM66_0313 rpoC; DNA-directed RNA polymerase, beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VCM66_2491 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VCM66_2629 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VCM66_1810 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VCM66_0493 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VCM66_0329 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VCM66_0626 mutH; DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D VCM66_1189 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VCM66_0724 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VCM66_0848 xseB; exodeoxyribonuclease, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VCM66_2168 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCM66_0013 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCM66_2424 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCM66_0909 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCM66_1939 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCM66_0284 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_1245 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_2156 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCM66_1009 dnaZX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCM66_0614 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCM66_0382 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VCM66_2546 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VCM66_2243 recB; exodeoxyribonuclease V, 135 kDa subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VCM66_2245 recC; exodeoxyribonuclease V, 125 kDa subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VCM66_2242 recD; exodeoxyribonuclease V, 67 kDa subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VCM66_0501 recA; recA protein K03553 recA; recombination protein RecA
D VCM66_1769 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VCM66_1768 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VCM66_1770 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VCM66_2598 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VCM66_0351 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D VCM66_1780 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N''
D VCM66_A0480 putative exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D VCM66_A0479 putative exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D VCM66_2266 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D VCM66_0014 recF; recF protein K03629 recF; DNA replication and repair protein RecF
D VCM66_2631 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VCM66_2382 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VCM66_1011 recR; recombination protein RecR K06187 recR; recombination protein RecR
D VCM66_0809 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D VCM66_0676 Recombination-associated protein rdgC K03554 rdgC; recombination associated protein RdgC
D VCM66_1575 helicase-related protein K19789 radD; DNA repair protein RadD
D VCM66_1213 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VCM66_0015 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VCM66_1670 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VCM66_0258 hupA; DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D VCM66_1843 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VCM66_0275 fis; factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VCM66_1177 himA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VCM66_1838 hipB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VCM66_0184 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VCM66_1086 vicH; DNA-binding protein VicH K03746 hns; DNA-binding protein H-NS
D VCM66_2210 dinP; DNA-damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D VCM66_0092 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D VCM66_1167 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D VCM66_0502 recX; regulatory protein RecX K03565 recX; regulatory protein
D VCM66_0166 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D VCM66_A0675 helD; helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D VCM66_1778 ATP-dependent helicase, DinG family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VCM66_1914 ATP-dependent helicase, DinG family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VCM66_1211 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VCM66_1210 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vcm03029]
D VCM66_0532 petB; ubiquinol--cytochrome c reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VCM66_0601 infB; initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D VCM66_A0287 infC; initiation factor IF3 K02520 infC; translation initiation factor IF-3
D VCM66_2182 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D VCM66_0305 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D VCM66_0346 tufA; elongation factor TU K02358 tuf; elongation factor Tu
D VCM66_0345 fusA-1; elongation factor G K02355 fusA; elongation factor G
D VCM66_2265 fusA-2; elongation factor G K02355 fusA; elongation factor G
D VCM66_2383 era; GTP-binding protein Era K03595 era; GTPase
D VCM66_0589 tyrS-2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCM66_0450 tyrS-1; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCM66_0912 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VCM66_1121 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VCM66_1998 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VCM66_0382 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VCM66_2175 surface antigen K07277 SAM50; outer membrane protein insertion porin family
D VCM66_0812 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D VCM66_0811 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VCM66_A0779 groEL-2; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_2584 groEL-1; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_A0778 groES-2; chaperonin, 10 Kd subunit K04078 groES; chaperonin GroES
D VCM66_2585 groES-1; chaperonin, 10 Kd subunit K04078 groES; chaperonin GroES
D VCM66_0813 dnaJ; dnaJ protein K03686 dnaJ; molecular chaperone DnaJ
D VCM66_0706 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VCM66_0709 hscB; chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VCM66_1968 putative monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D VCM66_0992 mrp; mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VCM66_0004 yidC; putative Inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCM66_A0037 Sco1-related protein K07152 SCO1; protein SCO1
D VCM66_0941 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vcm02000]
D VCM66_1802 msbA; transport ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VCM66_1404 rtxB; RTX toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D VCM66_1402 putative toxin secretion transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D VCM66_A0955 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VCM66_0187 putative hemolysin secretion ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VCM66_A1041 toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VCM66_1135 cydC; transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VCM66_1136 cydD; transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VCM66_1429 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D VCM66_0496 cysP; thiosulfate ABC transporter, periplasmic thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VCM66_A0414 periplasmic sulfate binding protein SBP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VCM66_0497 cysT; sulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D VCM66_0498 cysW; sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D VCM66_0499 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VCM66_A0684 modA; molybdenum ABC transporter, periplasmic molybdenum-binding protein K02020 modA; molybdate transport system substrate-binding protein
D VCM66_A0683 modB; molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D VCM66_A0682 modC; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VCM66_1465 conserved hypothetical protein K05772 tupA; tungstate transport system substrate-binding protein
D VCM66_1466 ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D VCM66_1467 ABC transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D VCM66_0566 fbpA; iron(III) ABC transporter, periplasmic iron-compound-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCM66_A0643 iron(III) ABC transporter, periplasmic iron-compound-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCM66_A0561 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCM66_0567 fbpB; iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VCM66_A0644 iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VCM66_A0559 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VCM66_A0645 iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCM66_0568 fbpC; iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCM66_A0560 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCM66_2460 tbpA; thiamin ABC transporter, periplasmic thiamin-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D VCM66_2459 putative thiamine ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D VCM66_2458 putative thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VCM66_1380 potD-1; spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCM66_1381 potD-2; spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCM66_0662 putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCM66_A1069 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCM66_1382 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D VCM66_1383 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D VCM66_1384 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VCM66_1604 ABC transporter, periplasmic substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D VCM66_1605 ABC transporter, permease protein K05778 ynjC; putative thiamine transport system permease protein
D VCM66_1606 ABC transporter, ATP-binding protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D VCM66_A0905 malE; maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VCM66_A0904 malF; maltose ABC transporter, permease protein K10109 malF; maltose/maltodextrin transport system permease protein
D VCM66_A0903 malG; maltose ABC transporter, permease protein K10110 malG; maltose/maltodextrin transport system permease protein
D VCM66_A0906 malK; maltose/maltodextrin ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VCM66_A0991 putative extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D VCM66_1280 mglB; galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VCM66_1283 mglC; galactoside ABC transporter, permease protein K10541 mglC; methyl-galactoside transport system permease protein
D VCM66_1282 mglA; galactoside ABC transporter, ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D VCM66_A0128 rbsB; ribose ABC transporter, periplasmic D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D VCM66_A0127 rbsC; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D VCM66_A0126 rbsA; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VCM66_1490 ugpB; glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D VCM66_1491 ugpA; glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D VCM66_1492 ugpE; glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D VCM66_1493 ugpC; glycerol-3-phosphate ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D VCM66_2440 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VCM66_2441 conserved hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VCM66_2442 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VCM66_2439 conserved hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D VCM66_2438 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D VCM66_A0067 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_0679 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_A0766 ABC transporter, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VCM66_A0068 pstC-2; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D VCM66_0682 pstC-1; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D VCM66_A0069 pstA-2; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D VCM66_0683 pstA-1; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D VCM66_A0070 pstB-2; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VCM66_0684 pstB-1; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VCM66_A0718 artI; arginine ABC transporter, periplasmic arginine-binding protein K09997 artI; arginine transport system substrate-binding protein
D VCM66_A0716 artM; arginine ABC transporter, permease protein K09998 artM; arginine transport system permease protein
D VCM66_A0717 artQ; arginine ABC transporter, permease protein K09999 artQ; arginine transport system permease protein
D VCM66_A0719 artP; arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VCM66_1317 amino acid ABC transporter, periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VCM66_1316 amino acid ABC transporter, permease protein K09970 aapQ; general L-amino acid transport system permease protein
D VCM66_1315 amino acid ABC transporter, permease protein K09971 aapM; general L-amino acid transport system permease protein
D VCM66_1314 amino acid ABC transporter, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VCM66_1786 amino acid ABC transporter, periplasmic amino acid-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VCM66_1784 amino acid ABC transporter, permease protein K10023 aotM; arginine/ornithine transport system permease protein
D VCM66_1785 amino acid ABC transporter, permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D VCM66_1787 amino acid ABC transporter, ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VCM66_0862 yaeC; lipoprotein YaeC K02073 metQ; D-methionine transport system substrate-binding protein
D VCM66_0863 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D VCM66_0864 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VCM66_1057 conserved hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D VCM66_1058 ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D VCM66_1059 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D VCM66_0010 amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VCM66_0009 amino acid ABC transproter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VCM66_0008 amino acid ABC transporter, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VCM66_1538 ABC transporter, periplasmic substrate-binding protein-related protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCM66_A0938 putative amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCM66_2542 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCM66_A0997 amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCM66_A0542 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCM66_A0940 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCM66_A0996 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VCM66_A0998 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VCM66_A0995 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VCM66_1047 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VCM66_1048 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VCM66_1049 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VCM66_1050 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VCM66_A0937 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCM66_1051 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCM66_1620 sapA; peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VCM66_1621 sapB; peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D VCM66_1622 sapC; peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D VCM66_1623 sapD; peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VCM66_1624 sapF; peptide ABC transporter, ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D VCM66_A1055 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCM66_0170 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCM66_0578 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCM66_A1056 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCM66_0171 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCM66_0577 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCM66_A1057 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCM66_0172 peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCM66_0576 peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCM66_0575 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCM66_A1058 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCM66_0169 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCM66_0574 peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VCM66_A0550 putative peptide ABC transporter, periplasmic peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D VCM66_A0549 putative peptide ABC transporter, permease protein K13894 yejB; microcin C transport system permease protein
D VCM66_A0548 putative peptide ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D VCM66_A0547 putative peptide ABC transporter, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D VCM66_0190 fhuC; iron(III) ABC transporter, periplasmic iron-compound-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VCM66_0191 fhuD; iron(III) ABC transporter, permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D VCM66_0189 fhuB; iron(III) ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VCM66_A0873 hutB; hemin ABC transporter, periplasmic hemin-binding protein HutB K25132 hmuT; heme transport system substrate-binding protein
D VCM66_A0874 hutC; hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D VCM66_A0875 hutD; hemin ABC transporter, ATP-binding protein HutD K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D VCM66_0734 viuP; vibriobactin and enterobactin ABC transporter, periplasmic ferric vibriobactin/enterobactin-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D VCM66_0735 viuD; vibriobactin and enterobactin ABC transporter, permease protein K23186 fepD; iron-siderophore transport system permease protein
D VCM66_0736 viuG; vibriobactin and enterobactin ABC transporter, permease protein K23187 fepG; iron-siderophore transport system permease protein
D VCM66_0737 viuC; vibriobactin and enterobactin ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D VCM66_A0223 vctP; vibriobactin and enterobactin ABC transporter, periplasmic vibriobactin/enterobactin-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D VCM66_A0225 vctG; vibriobactin and enterobactin ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D VCM66_A0224 vctD; vibriobactin and enterobactin ABC transporter, permease protein K25284 yclN; iron-siderophore transport system permease protein
D VCM66_A0226 vctC; vibriobactin and enterobactin ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D VCM66_2304 Vitamin B12-binding protein precursor K06858 btuF; vitamin B12 transport system substrate-binding protein
D VCM66_1199 putative vitamin B12 ABC transporter, permease protein K06073 btuC; vitamin B12 transport system permease protein
D VCM66_1200 putative vitamin B12 ABC transporter, ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VCM66_2005 znuA; zinc ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D VCM66_2007 znuB; zinc ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D VCM66_2006 znuC; zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VCM66_0234 rfbH; lipopolysaccharide/O-antigen transport protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D VCM66_0235 rfbI; lipopolysaccharide/O-antigen transport protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D VCM66_2422 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D VCM66_2421 putative Inner membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D VCM66_2449 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VCM66_1806 Lipoprotein-releasing system transmembrane protein lolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VCM66_1808 Lipoprotein-releasing system transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D VCM66_1807 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VCM66_1978 ccmD; heme exporter protein D K02196 ccmD; heme exporter protein D
D VCM66_1979 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D VCM66_1980 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D VCM66_1981 ccmA; heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VCM66_0149 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VCM66_0148 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VCM66_0548 putative permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D VCM66_1548 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VCM66_1549 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VCM66_1600 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VCM66_1599 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VCM66_0547 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VCM66_2475 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VCM66_1568 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VCM66_A0740 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VCM66_A0813 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VCM66_1506 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VCM66_1507 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VCM66_A0741 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCM66_1508 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCM66_2474 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCM66_A0814 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCM66_1569 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCM66_A0024 transporter, NadC family K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VCM66_1269 putative transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VCM66_0322 putative transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VCM66_0634 ntpA; nptA protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D VCM66_1481 putative multidrug resistance protein K26939 norM; MATE family, multidrug efflux pump
D VCM66_A0948 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D VCM66_0090 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D VCM66_1570 putative membrane protein K26937 dinF; MATE family, multidrug efflux pump
D VCM66_2591 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D VCM66_0608 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D VCM66_1216 Sugar efflux transporter A K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D VCM66_A0513 oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D VCM66_0287 putative 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D VCM66_A0135 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D VCM66_A0642 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VCM66_A0665 putative regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VCM66_1027 putative transporter K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D VCM66_2223 putative ampG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VCM66_0069 putative multidrug resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VCM66_1573 multidrug resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VCM66_A0210 emrD-2; multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D VCM66_1366 vceB; multidrug resistance protein VceB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D VCM66_1558 putative multidrug resistance protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D VCM66_A0712 conserved hypothetical protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D VCM66_0921 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VCM66_0630 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VCM66_0922 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VCM66_2454 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D VCM66_A0477 fruB; PTS system, fructose-specific IIA/FPR component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VCM66_0920 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCM66_1937 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VCM66_0951 nagE; PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VCM66_A0611 scrA; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VCM66_0867 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VCM66_0195 putative PTS system, sucrose-specific IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VCM66_1743 frvA; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VCM66_A0475 fruA-2; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VCM66_1746 frwB; PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VCM66_1745 frwABC; PTS system, fructose-specific IIABC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VCM66_1744 frwBC; PTS system, fructose-specific IIBC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VCM66_A1003 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VCM66_1238 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VCM66_1236 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VCM66_1237 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VCM66_A0241 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VCM66_A0242 sgaT; SgaT protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VCM66_2452 ptsN; PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VCM66_1747 putative PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VCM66_A0704 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D VCM66_A0190 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D VCM66_0565 putative ammonium transporter K03320 amt; ammonium transporter, Amt family
D VCM66_0534 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D VCM66_A0167 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D VCM66_A0168 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D VCM66_1313 conserved hypothetical protein K19416 yccA; modulator of FtsH protease
D VCM66_1635 putative formate transporter K06212 focA; formate transporter
D VCM66_A0499 putative formate transporter 1 K06212 focA; formate transporter
D VCM66_A0570 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D VCM66_1690 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D VCM66_0465 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D VCM66_0250 conserved hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel
D VCM66_A0777 putative magnesium transporter MgtE K06213 mgtE; magnesium transporter
D VCM66_2455 mgtE-2; magnesium transporter K06213 mgtE; magnesium transporter
D VCM66_1594 mgtE-1; magnesium transporter K06213 mgtE; magnesium transporter
D VCM66_0849 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D VCM66_0850 pomB; chemotaxis protein PomB K02557 motB; chemotaxis protein MotB
D VCM66_2521 motX; sodium-type flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VCM66_0964 motY; sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VCM66_A0871 exbB1; TonB system transport protein ExbB1 K03561 exbB; biopolymer transport protein ExbB
D VCM66_1487 exbB2; TonB system transport protein ExbB2 K03561 exbB; biopolymer transport protein ExbB
D VCM66_1488 biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D VCM66_1486 exbD2; TonB system transport protein ExbD2 K03559 exbD; biopolymer transport protein ExbD
D VCM66_1762 tolQ; tolQ protein K03562 tolQ; biopolymer transport protein TolQ
D VCM66_1761 tolR; tolR membrane protein K03560 tolR; biopolymer transport protein TolR
D VCM66_2257 Zinc transport protein zntB K16074 zntB; zinc transporter
D VCM66_0060 crcB; crcB protein K06199 crcB; fluoride exporter
D VCM66_A0796 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCM66_0256 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCM66_0516 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCM66_0591 ompU; outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VCM66_1777 ompT; ompT protein K10940 ompT; outer membrane protein OmpT
D VCM66_A0986 ompS; maltoporin K02024 lamB; maltoporin
D VCM66_2136 ompA; outer membrane protein OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VCM66_A0821 fadL-3; long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VCM66_0997 fadL-1; long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VCM66_0998 fadL-2; long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VCM66_2228 ompK; outer membrane protein OmpK K05517 tsx; nucleoside-specific channel-forming protein
D VCM66_0155 btuB; vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D VCM66_0460 irgA; enterobactin receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D VCM66_A0583 hasR; heme receptor HasR K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VCM66_A0228 vctA; enterobactin receptor VctA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VCM66_A0535 hutA; heme transport protein HutA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VCM66_0269 TonB system receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VCM66_A0061 hutR; heme receptor HutR K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VCM66_0188 fhuA; iron(III) compound receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VCM66_2134 viuA; ferric vibriobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VCM66_2359 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1505 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1561 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VCM66_0892 polysaccharide export-related protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VCM66_2175 surface antigen K07277 SAM50; outer membrane protein insertion porin family
D VCM66_0720 putative lipoprotein K17713 bamB; outer membrane protein assembly factor BamB
D VCM66_2079 nlpB; putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D VCM66_0666 conserved hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D VCM66_0808 smpA; small protein A K06186 bamE; outer membrane protein assembly factor BamE
D VCM66_2469 conserved hypothetical protein K07278 tamA; translocation and assembly module TamA
D VCM66_2468 conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D VCM66_2448 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D VCM66_2447 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D VCM66_0431 imp; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D VCM66_0910 rlpB; rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D VCM66_0891 conserved hypothetical protein K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VCM66_A0215 hlyA; hemolysin K10948 hlyA; hemolysin
D VCM66_0915 putative hemolysin K06189 corC; hemolysin (HlyC) family protein
D VCM66_2025 conserved hypothetical protein K06518 cidA; holin-like protein
D VCM66_1188 conserved hypothetical protein K06518 cidA; holin-like protein
D VCM66_A1020 potE; putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D VCM66_0265 putative cadaverine/lysine antiporter K03757 cadB; cadaverine:lysine antiporter
D VCM66_0418 arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D VCM66_A0806 conserved hypothetical protein K16263 yjeH; amino acid efflux transporter
D VCM66_2610 Cation-efflux pump fieF K13283 fieF; ferrous-iron efflux pump FieF
D VCM66_0163 putative multidrug resistance protein K18138 acrB; multidrug efflux pump
D VCM66_0587 putative multidrug resistance protein K18989 vexF; multidrug efflux pump
D VCM66_1348 sugE; sugE protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D VCM66_1266 putative Inner membrane protein K11939 rhtA; inner membrane transporter RhtA
D VCM66_0183 rarD; rarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D VCM66_0961 conserved hypothetical protein K07084 yuiF; putative amino acid transporter
D VCM66_0271 putative gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VCM66_A0864 permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VCM66_2619 dcuA; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D VCM66_A0201 dcuB; C4-dicarboxylate transporter, anaerobic K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VCM66_A0942 putative L-lactate permease K03303 lutP; lactate permease
D VCM66_2444 putative Inner membrane protein K07301 yrbG; cation:H+ antiporter
D VCM66_A1029 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D VCM66_2625 putative sodium/solute symporter K14393 actP; cation/acetate symporter
D VCM66_A0035 sodium/dicarboxylate symporter K07862 sstT; serine/threonine transporter
D VCM66_A0040 glts; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D VCM66_1566 nhaA; Na+/H+ antiporter protein K03313 nhaA; Na+:H+ antiporter, NhaA family
D VCM66_1825 nhaB; Na+/H+ antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D VCM66_1961 yqkI; Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D VCM66_1087 putative membrane protein K18218 tet35; tetracycline resistance efflux pump
D VCM66_A0209 conserved hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D VCM66_2623 putative Cell volume regulation protein K11105 cvrA; potassium/hydrogen antiporter
D VCM66_0374 putative Na+/H+ antiporter K03316 nhaP; Na+:H+ antiporter
D VCM66_2526 kefB; glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VCM66_2527 putative NAD(P)H oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VCM66_2676 trkH-2; potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VCM66_0042 trkH-1; potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VCM66_0043 trkA; potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D VCM66_2094 uraA; uracil permease K02824 uraA; uracil permease
D VCM66_2632 xanthine/uracil permease family protein K16345 xanP; xanthine permease XanP
D VCM66_2201 putative membrane protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VCM66_A0731 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D VCM66_A0158 mtr; tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D VCM66_1597 sdaC-2; serine transporter K03837 sdaC; serine transporter
D VCM66_1256 sdaC-1; serine transporter K03837 sdaC; serine transporter
D VCM66_1894 benE; benzoate transport protein K05782 benE; benzoate membrane transport protein
D VCM66_A0485 conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family
D VCM66_2262 chromate resistance protein-related protein K07240 chrA; chromate transporter
D VCM66_A0075 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D VCM66_0545 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D VCM66_1955 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D VCM66_1853 dctP-2; C4-dicarboxylate-binding periplasmic protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D VCM66_1852 putative C4-dicarboxylate transport protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VCM66_1851 dctM; putative C4-dicarboxylate transport protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VCM66_A0623 dcuC; C4-dicarboxylate transporter, anaerobic K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D VCM66_A0155 putative NADH dehydrogenase K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D VCM66_A0154 conserved hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D VCM66_A0153 putative NADH dehydrogenase K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D VCM66_A0152 conserved hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D VCM66_A0151 conserved hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D VCM66_A0150 conserved hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D VCM66_0638 mviN; MviN protein K03980 murJ; putative peptidoglycan lipid II flippase
D VCM66_A0023 putative membrane protein K13936 mdcF; malonate transporter and related proteins
D VCM66_1184 putative membrane protein K24180 mleP; malate permease and related proteins
D VCM66_A0488 kup; potassium uptake protein, Kup system K03549 kup; KUP system potassium uptake protein
D VCM66_0466 LysE/YggA family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D VCM66_0136 Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VCM66_1863 conserved hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VCM66_0179 Threonine efflux protein K05835 rhtC; threonine efflux protein
D VCM66_A0805 conserved hypothetical protein K05835 rhtC; threonine efflux protein
D VCM66_A0961 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D VCM66_A0962 conserved hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D VCM66_1287 conserved hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D VCM66_1288 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D VCM66_1289 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D VCM66_2085 putative permease PerM K03548 perM; putative permease
D VCM66_2626 putative Inner membrane protein K09125 yhhQ; queuosine precursor transporter
D VCM66_1959 conserved hypothetical protein K05595 marC; multiple antibiotic resistance protein
D VCM66_2325 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VCM66_0022 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VCM66_A0870 tonB1; tonB1 protein K03832 tonB; periplasmic protein TonB
D VCM66_1485 tonB2; tonB2 protein K03832 tonB; periplasmic protein TonB
D VCM66_1758 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D VCM66_1760 tolA; tolA protein K03646 tolA; colicin import membrane protein
D VCM66_1759 tolB; tolB protein K03641 tolB; TolB protein
D VCM66_0750 oadB-2; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCM66_0509 oadB-1; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCM66_0751 oadA-2; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VCM66_0508 oadA-1; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VCM66_0752 putative oxaloacetate decarboxylase gamma chain 2 K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VCM66_0507 putative oxaloacetate decarboxylase gamma chain 1 K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VCM66_1632 torA; trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCM66_1633 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VCM66_1660 torD; torD protein K03533 torD; TorA specific chaperone
D VCM66_1875 yecK; cytochrome c-type protein YecK K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VCM66_1874 bisZ; biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCM66_1365 vceA; multidrug resistance protein VceA K03543 emrA; membrane fusion protein, multidrug efflux system
D VCM66_1403 rtxD; RTX toxin transporter K12532 rtxD; membrane fusion protein, RTX toxin transport system
D VCM66_A1038 secretion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D VCM66_1695 putative periplasmic linker protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D VCM66_0164 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0870 Multidrug resistance protein mdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0586 Nodulation protein nolF K18990 vexE; membrane fusion protein, multidrug efflux system
D VCM66_0893 putative exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VCM66_A0131 pnuC; pnuC protein K03811 pnuC; nicotinamide mononucleotide transporter
D VCM66_2002 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D VCM66_2001 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D VCM66_2000 feoC; conserved hypothetical protein K10123 feoC; putative ferrous iron transport protein C
D VCM66_0079 Universal stress protein B K06144 uspB; universal stress protein B
D VCM66_1976 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VCM66_1273 ompV; outer membrane protein OmpV K07274 mipA; MipA family protein
C 02044 Secretion system [BR:vcm02044]
D VCM66_2359 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1505 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1404 rtxB; RTX toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D VCM66_1402 putative toxin secretion transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D VCM66_1403 rtxD; RTX toxin transporter K12532 rtxD; membrane fusion protein, RTX toxin transport system
D VCM66_A1041 toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VCM66_A1038 secretion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D VCM66_1561 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VCM66_2368 exeA; general secretion pathway protein A K02450 gspA; general secretion pathway protein A
D VCM66_2367 putative general secretion pathway protein B K02451 gspB; general secretion pathway protein B
D VCM66_2654 epsC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VCM66_2653 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VCM66_2652 epsE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VCM66_2651 epsF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VCM66_2650 epsG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VCM66_2649 epsH; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VCM66_2648 epsI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VCM66_2647 epsJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VCM66_2646 epsK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VCM66_2645 epsL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VCM66_2644 epsM; cholera toxin secretion protein EpsM K02462 gspM; general secretion pathway protein M
D VCM66_2643 epsN; general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VCM66_2349 pilD; leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VCM66_2346 pilA; fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D VCM66_2347 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D VCM66_2348 pilC; type IV pilin biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VCM66_0814 putative fimbrial assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D VCM66_1552 putative fimbrial biogenesis and twitching motility protein K02656 pilF; type IV pilus assembly protein PilF
D VCM66_2554 putative fimbrial assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VCM66_2553 putative fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VCM66_2552 putative fimbrial assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VCM66_2551 putative fimbrial assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VCM66_2550 pilQ; fimbrial assembly protein K02666 pilQ; type IV pilus assembly protein PilQ
D VCM66_0447 pilT-1; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VCM66_0448 pilT-2; twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D VCM66_0818 putative type IV pilin K02671 pilV; type IV pilus assembly protein PilV
D VCM66_0816 conserved hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D VCM66_0815 putative type IV pilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D VCM66_0954 conserved hypothetical protein K08086 fimV; pilus assembly protein FimV
D VCM66_0785 tcpA; toxin co-regulated pilin K10930 tcpA; toxin coregulated pilin
D VCM66_0786 tcpB; toxin co-regulated pilus biosynthesis protein B K10931 tcpB; toxin coregulated pilus biosynthesis protein B
D VCM66_0788 tcpC; toxin co-regulated pilus biosynthesis outer membrane protein C K10932 tcpC; toxin coregulated pilus biosynthesis outer membrane protein C
D VCM66_0790 tcpD; toxin co-regulated pilus biosynthesis protein D K10933 tcpD; toxin coregulated pilus biosynthesis protein D
D VCM66_0793 tcpE; toxin co-regulated pilus biosynthesis protein E K10934 tcpE; toxin coregulated pilus biosynthesis protein E
D VCM66_0794 tcpF; toxin co-regulated pilus biosynthesis protein F K10935 tcpF; toxin coregulated pilus biosynthesis protein F
D VCM66_0784 tcpH; toxin co-regulated pilus biosynthesis protein H K10919 tcpH; toxin coregulated pilus biosynthesis protein H
D VCM66_0782 tcpI; toxin co-regulated pilus biosynthesis protein I K10961 tcpI; toxin coregulated pilus biosynthesis protein I
D VCM66_0796 tcpJ; leader peptidase TcpJ K10966 tcpJ; toxin coregulated pilus biosynthesis protein J [EC:3.4.23.43 2.1.1.-]
D VCM66_0783 tcpP; toxin co-regulated pilus biosynthesis protein P K10920 tcpP; toxin coregulated pilus biosynthesis protein P
D VCM66_0787 tcpQ; toxin co-regulated pilus biosynthesis protein Q K10962 tcpQ; toxin coregulated pilus biosynthesis protein Q
D VCM66_0789 tcpR; toxin co-regulated pilus biosynthesis protein R K10963 tcpR; toxin coregulated pilus biosynthesis protein R
D VCM66_0791 tcpS; toxin co-regulated pilus biosynthesis protein S K10964 tcpS; toxin coregulated pilus biosynthesis protein S
D VCM66_0792 tcpT; toxin co-regulated pilus biosynthesis protein T K10965 tcpT; toxin coregulated pilus biosynthesis protein T
D VCM66_0394 mshA; MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VCM66_0393 mshB; MSHA pilin protein MshB K10925 mshB; MSHA pilin protein MshB
D VCM66_0395 mshC; MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC
D VCM66_0396 mshD; MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VCM66_0390 mshE; MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VCM66_0392 mshF; MSHA biogenesis protein MshF K12277 mshF; MSHA biogenesis protein MshF
D VCM66_0391 mshG; MSHA biogenesis protein MshG K12278 mshG; MSHA biogenesis protein MshG
D VCM66_0384 mshI; MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D VCM66_0385 mshJ; MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ
D VCM66_0386 mshK; MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK
D VCM66_0387 mshL; MSHA biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D VCM66_0388 mshM; MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM
D VCM66_0389 mshN; MSHA biogenesis protein MshN K12284 mshN; MSHA biogenesis protein MshN
D VCM66_0397 hypothetical protein K12285 mshO; MSHA biogenesis protein MshO
D VCM66_0398 conserved hypothetical protein K12286 mshP; MSHA biogenesis protein MshP
D VCM66_0399 conserved hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ
D VCM66_0444 conserved hypothetical protein K02221 yggT; YggT family protein
D VCM66_1841 conserved hypothetical protein K02237 comEA; competence protein ComEA
D VCM66_A0799 putative deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VCM66_1803 Rec2-related protein K02238 comEC; competence protein ComEC
D VCM66_1993 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VCM66_2043 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VCM66_2056 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VCM66_2054 putative flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VCM66_2053 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VCM66_2048 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VCM66_2047 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VCM66_2046 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VCM66_2045 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VCM66_2044 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VCM66_2341 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VCM66_A0118 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VCM66_A0113 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D VCM66_A0112 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D VCM66_A0109 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D VCM66_A0108 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D VCM66_A0106 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D VCM66_A0105 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D VCM66_1370 hcp-1; hcp protein K11903 hcp; type VI secretion system secreted protein Hcp
D VCM66_A0016 hcp-2; hcp protein K11903 hcp; type VI secretion system secreted protein Hcp
D VCM66_1371 vgrG-1; vgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCM66_A0121 vgrG-3; vgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCM66_A0017 vgrG-2; vgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCM66_A0107 conserved hypothetical protein K11905 K11905; type VI secretion system protein
D VCM66_A0111 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D VCM66_A0114 clpB-2; clpB protein K11907 vasG; type VI secretion system protein VasG
D VCM66_A0117 conserved hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D VCM66_A0119 conserved hypothetical protein K11911 vasL; type VI secretion system protein VasL
D VCM66_A0110 conserved hypothetical protein K11894 impI; type VI secretion system protein ImpI
D VCM66_A0116 conserved hypothetical protein K11909 vasI; type VI secretion system protein VasI
D VCM66_2317 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VCM66_2573 secB; protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VCM66_0701 secD-1; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCM66_A0651 secD-2; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCM66_0306 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VCM66_A0650 secF-2; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCM66_0702 secF-1; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCM66_0598 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VCM66_2496 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VCM66_0518 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VCM66_0147 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VCM66_0700 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D VCM66_0004 yidC; putative Inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCM66_A0492 tatA-2; tatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VCM66_0086 tatA-1; tatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VCM66_0087 Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB
D VCM66_0088 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vcm02042]
D VCM66_2246 conserved hypothetical protein K11041 eta; exfoliative toxin A/B
D VCM66_A0215 hlyA; hemolysin K10948 hlyA; hemolysin
D VCM66_1407 rtxA; RTX toxin RtxA K10953 rtxA; RTX toxin RtxA
D VCM66_A0796 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCM66_0256 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCM66_0516 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCM66_0040 putative hemolysin K11068 hlyIII; hemolysin III
D VCM66_A0214 thermolabile hemolysin K11018 tlh; thermolabile hemolysin
D VCM66_1722 nanH; neuraminidase K23550 nanH; sialidase [EC:3.2.1.18]
D VCM66_1589 vcc; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:vcm02022]
D VCM66_0678 phoR; histidine protein kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VCM66_0677 phoB; DNA-binding response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VCM66_2633 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VCM66_2634 ompR; transcriptional regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VCM66_1274 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VCM66_1275 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D VCM66_2613 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VCM66_2612 cpxR; transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VCM66_A1061 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VCM66_A1062 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VCM66_A0490 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VCM66_A0491 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VCM66_A0667 torS; sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VCM66_1659 torR; DNA-binding response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VCM66_2292 fexB; sensor histidine kinase FexB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VCM66_2291 fexA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VCM66_1577 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D VCM66_A0235 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D VCM66_1232 transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VCM66_A0633 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VCM66_A0632 narP; nitrate/nitrite response regulator NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VCM66_A0641 uhpB; sensor protein UhpB K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D VCM66_A0640 uhpA; transcriptional regulator UhpA K20264 fusR; two-component system, NarL family, response regulator FusR
D VCM66_2376 sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VCM66_1168 transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VCM66_1592 vieS; sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VCM66_1231 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VCM66_0749 citA; sensor kinase citA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VCM66_0748 citB; transcriptional regulator CitB K07702 dpiA; two-component system, CitB family, response regulator CitB
D VCM66_1545 putative sensor kinase citA K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VCM66_1544 response regulator K02475 K02475; two-component system, CitB family, response regulator
D VCM66_0652 GAF/HisKin family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VCM66_0651 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D VCM66_2668 ntrB; nitrogen regulation protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VCM66_2669 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VCM66_A0663 putative phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VCM66_A0662 phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VCM66_1849 dctB; putative C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCM66_1850 dctD-1; putative C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VCM66_A0140 dctD-2; C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VCM66_1463 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VCM66_1040 sensory box sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VCM66_A1052 cheA-3; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1352 cheA-1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1987 cheA-2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_A1053 cheY-4; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1271 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1350 cheY-1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1353 cheY-2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1989 cheY-3; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1038 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_A1046 cheB-3; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_1356 cheB-1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_1986 cheB-2; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_A0914 putative chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_1930 cheV-2; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_1542 cheV-1; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_2125 cheV-3; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_A0694 luxQ; sensor histidine kinase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCM66_A0481 luxN; sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCM66_0977 luxU; phosphorelay protein K10911 luxU; two-component system, phosphorelay protein LuxU
D VCM66_0976 luxO; LuxO repressor protein K10912 luxO; two-component system, repressor protein LuxO
D VCM66_2059 flrB; flagellar regulatory protein B K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCM66_2058 flrC; flagellar regulatory protein C K10943 flrC; two-component system, response regulator FlrC
D VCM66_1036 Hpt family protein K20976 hptB; histidine phosphotransfer protein HptB
D VCM66_A1043 response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D VCM66_0580 sensory box sensor histidine kinase/response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS
C 02035 Bacterial motility proteins [BR:vcm02035]
D VCM66_A1052 cheA-3; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1352 cheA-1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_1987 cheA-2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCM66_A1050 cheW-2; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_A1051 cheW-3; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1357 putative purine-binding chemotaxis protein Chew K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1983 cheW-1; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_1984 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D VCM66_0361 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D VCM66_1039 conserved hypothetical protein K03410 cheC; chemotaxis protein CheC
D VCM66_A1047 putative chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D VCM66_A1048 cheR-3; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_1354 cheR-1; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_2124 cheR-2; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCM66_A1046 cheB-3; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_1356 cheB-1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_1986 cheB-2; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCM66_A1053 cheY-4; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1271 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1350 cheY-1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1353 cheY-2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1989 cheY-3; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1038 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCM66_1988 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D VCM66_A0914 putative chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_1930 cheV-2; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_1542 cheV-1; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_2125 cheV-3; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCM66_0267 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1253 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0204 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0098 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_0434 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1203 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1244 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1268 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1349 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_2084 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1358 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1361 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1368 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1582 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1477 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1782 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1791 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_1822 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_2362 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0172 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0008 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0934 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0939 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0264 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0621 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0732 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0823 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0883 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0989 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0992 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1027 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1014 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1045 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A1049 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCM66_A0616 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCM66_A0947 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCM66_2054 putative flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VCM66_2053 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VCM66_2052 putative flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D VCM66_2047 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VCM66_2046 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VCM66_2045 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VCM66_2044 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VCM66_1993 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VCM66_2043 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VCM66_2055 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VCM66_2049 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VCM66_2048 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VCM66_2056 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VCM66_2116 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VCM66_2126 flagellar protein, putative K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VCM66_2117 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VCM66_0097 putative flagellar protein FliL K02415 fliL; flagellar protein FliL
D VCM66_2050 putative flagellar protein FliL K02415 fliL; flagellar protein FliL
D VCM66_2057 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VCM66_2051 putative flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VCM66_2123 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VCM66_2122 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VCM66_2121 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VCM66_2119 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VCM66_2118 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VCM66_2115 flgJ; flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D VCM66_2120 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VCM66_2114 flgM; flagellar hook-associated protein FlgM K02396 flgK; flagellar hook-associated protein 1
D VCM66_2113 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VCM66_2128 conserved hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D VCM66_2131 conserved hypothetical protein K24343 flgT; flagellar H-ring protein FlgT
D VCM66_2130 conserved hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D VCM66_2129 conserved hypothetical protein K09860 flgP; outer membrane protein FlgP
D VCM66_2521 motX; sodium-type flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VCM66_0964 motY; sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VCM66_2065 flaB; flagellin FlaB K02406 fliC; flagellin
D VCM66_2066 flaD; flagellin FlaD K02406 fliC; flagellin
D VCM66_2067 flaE; flagellin FlaE K02406 fliC; flagellin
D VCM66_2110 flaC; flagellin FlaC K02406 fliC; flagellin
D VCM66_2111 flaA; flagellin core protein A K02406 fliC; flagellin
D VCM66_2063 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VCM66_2061 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VCM66_1990 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D VCM66_0849 pomA; chemotaxis protein PomA K02556 motA; chemotaxis protein MotA
D VCM66_0850 pomB; chemotaxis protein PomB K02557 motB; chemotaxis protein MotB
D VCM66_2060 flrA; flagellar regulatory protein A K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCM66_2059 flrB; flagellar regulatory protein B K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCM66_2058 flrC; flagellar regulatory protein C K10943 flrC; two-component system, response regulator FlrC
D VCM66_2127 putative negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VCM66_2064 flaG; flagellin FlaG K06603 flaG; flagellar protein FlaG
D VCM66_2062 putative flagellar rod protein FlaI K06604 flaI; flagellar protein FlaI
D VCM66_1992 putative flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D VCM66_1991 MinD-related protein K04562 flhG; flagellar biosynthesis protein FlhG
D VCM66_0447 pilT-1; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VCM66_0448 pilT-2; twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D VCM66_2346 pilA; fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D VCM66_2347 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D VCM66_2348 pilC; type IV pilin biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VCM66_2349 pilD; leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VCM66_1552 putative fimbrial biogenesis and twitching motility protein K02656 pilF; type IV pilus assembly protein PilF
D VCM66_2550 pilQ; fimbrial assembly protein K02666 pilQ; type IV pilus assembly protein PilQ
D VCM66_2551 putative fimbrial assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VCM66_2552 putative fimbrial assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VCM66_2553 putative fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VCM66_2554 putative fimbrial assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VCM66_0818 putative type IV pilin K02671 pilV; type IV pilus assembly protein PilV
D VCM66_0816 conserved hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D VCM66_0814 putative fimbrial assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vcm04812]
D VCM66_0400 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VCM66_2320 ftsz; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VCM66_2321 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VCM66_1883 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VCM66_1884 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VCM66_1885 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D VCM66_2693 ParA family protein K03496 parA; chromosome partitioning protein
D VCM66_1985 ParA family protein K03496 parA; chromosome partitioning protein
D VCM66_A1071 ParA family protein K03496 parA; chromosome partitioning protein
D VCM66_2692 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCM66_A1070 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vcm04147]
D VCM66_0941 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VCM66_2370 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCM66_1924 gapA-1; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCM66_A0802 gapA-2; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCM66_0462 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VCM66_1932 pykA-1; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_A0666 pykA-2; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_0470 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCM66_2222 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VCM66_0689 antioxidant, AhpC/Tsa family K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D VCM66_A0779 groEL-2; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_2584 groEL-1; chaperonin, 60 Kd subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCM66_0812 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D VCM66_0358 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCM66_0725 guaB; inosine-5`-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VCM66_0305 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D VCM66_0346 tufA; elongation factor TU K02358 tuf; elongation factor Tu
D VCM66_1821 Hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VCM66_1909 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2406 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_2264 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_0237 rfbL; rfbL protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCM66_0634 ntpA; nptA protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D VCM66_A0648 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCM66_0942 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VCM66_1008 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VCM66_2561 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VCM66_2562 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VCM66_2465 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCM66_1535 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VCM66_A0015 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VCM66_A0703 gplK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VCM66_2666 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCM66_0105 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VCM66_1299 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VCM66_A0786 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VCM66_2403 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCM66_A0588 D-3-phosphoglycerate dehydrogenase-related protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCM66_0261 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VCM66_2558 pyridine nucleotide-disulfide oxidoreductase, class I K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_2335 lpdA; pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCM66_A0856 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VCM66_2590 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VCM66_A0306 Lipocalin-like protein K03098 APOD; apolipoprotein D and lipocalin family protein
D VCM66_A0403 Lipocalin-like protein K03098 APOD; apolipoprotein D and lipocalin family protein
D VCM66_A0356 Lipocalin-like protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:vcm02048]
D VCM66_1703 putative type I restriction enzyme HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VCM66_1706 conserved hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VCM66_1707 putative DNA methylase HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VCM66_2546 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VCM66_A0407 DNA methylase N-4/N-6 K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D VCM66_A0194 putative site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCM66_A0346 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D VCM66_A0404 relE protein K06218 relE; mRNA interferase RelE/StbE
D VCM66_A0440 Cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE
D VCM66_A0405 antitoxin of toxin-antitoxin stability system, StbD family K18923 stbD; antitoxin StbD
D VCM66_A0439 antitoxin of toxin-antitoxin stability system K18923 stbD; antitoxin StbD
D VCM66_A0362 plasmid stabilization system protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D VCM66_A0363 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D VCM66_0773 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCM66_1616 pspC; phage shock protein C K03973 pspC; phage shock protein C
D VCM66_1617 pspB; phage shock protein B K03970 pspB; phage shock protein B
D VCM66_A0314 putative plasmid stabilization element ParE K19092 parE1_3_4; toxin ParE1/3/4
D VCM66_A0348 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D VCM66_A0365 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D VCM66_A0451 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D VCM66_A0437 doc protein K07341 doc; death on curing protein
D VCM66_A0349 Prevent-host-death protein K19165 phd; antitoxin Phd
D VCM66_A0371 putative killer protein K07334 higB-1; toxin HigB-1
D VCM66_A0400 putative killer protein K07334 higB-1; toxin HigB-1
D VCM66_A0372 putative antidote protein K21498 higA-1; antitoxin HigA-1
D VCM66_A0401 putative antidote protein K21498 higA-1; antitoxin HigA-1
D VCM66_1496 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D VCM66_2320 ftsz; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VCM66_0400 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VCM66_2353 parC; topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VCM66_2354 parE; topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VCM66_2137 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCM66_2394 conserved hypothetical protein K09159 cptB; antitoxin CptB
D VCM66_0706 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:vcm04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:vcm04090]
C 01504 Antimicrobial resistance genes [BR:vcm01504]
D VCM66_1087 putative membrane protein K18218 tet35; tetracycline resistance efflux pump
D VCM66_A0209 conserved hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D VCM66_A0435 hypothetical protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D VCM66_A0249 antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VCM66_0164 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0870 Multidrug resistance protein mdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VCM66_0163 putative multidrug resistance protein K18138 acrB; multidrug efflux pump
D VCM66_1695 putative periplasmic linker protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D VCM66_0930 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VCM66_2359 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D VCM66_1505 putative outer membrane protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:vcm00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vcm03100]
D VCM66_tRNAALA1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAALA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAALA5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAALA3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAALA4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCM66_tRNAARG8 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAARG6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCM66_tRNAASN1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCM66_tRNAASN3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCM66_tRNAASN4 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCM66_tRNAASN2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCM66_tRNAASP1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNAASP5 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNAASP2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNAASP4 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNAASP3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCM66_tRNACYS1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCM66_AtRNACYS1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCM66_AtRNACYS2 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCM66_tRNAGLN3 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLN2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLN1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLN5 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLN4 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCM66_tRNAGLU1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCM66_tRNAGLU3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCM66_tRNAGLU2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCM66_AtRNAGLY tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY7 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAGLY6 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCM66_tRNAHIS1 tRNA-His K14226 tRNA-His; tRNA His
D VCM66_tRNAHIS2 tRNA-His K14226 tRNA-His; tRNA His
D VCM66_tRNAILE1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCM66_tRNAILE3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCM66_tRNAILE2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCM66_tRNALEU11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU9 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU7 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU8 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_AtRNALEU tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALEU1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCM66_tRNALYS1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCM66_tRNALYS2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCM66_tRNAMET6 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET8 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET7 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET9 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET4 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET5 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET1 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET2 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAMET3 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCM66_tRNAPHE1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCM66_tRNAPHE3 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCM66_tRNAPHE2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCM66_tRNAPRO1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCM66_tRNAPRO4 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCM66_tRNAPRO2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCM66_tRNAPRO3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCM66_tRNASER1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNASER5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNASER2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNASER3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNASER4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCM66_tRNATHR3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR6 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATHR4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCM66_tRNATRP1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VCM66_tRNATYR1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNATYR4 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNATYR5 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNATYR2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNATYR3 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCM66_tRNAVAL1 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCM66_tRNAVAL2 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCM66_tRNAVAL3 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCM66_tRNAVAL4 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCM66_16S01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S05 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_16S06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCM66_23S01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S07 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_23S06 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCM66_5S01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S05 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCM66_5S06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D VCM66_A1025 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D VCM66_1025 gap; glyceraldehyde 3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D VCM66_1917 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D VCM66_0510 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D VCM66_2470 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VCM66_A0573 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D VCM66_1922 PilB-related protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D VCM66_1191 PilB-related protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D VCM66_A0543 putative glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D VCM66_1052 conserved hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D VCM66_0089 yhjA; cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VCM66_2083 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VCM66_0781 tagD; tagD protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VCM66_A0965 putative organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D VCM66_2068 tyrA protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D VCM66_A0929 pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VCM66_A0179 hmpA; ferrisiderophore reductase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D VCM66_0078 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D VCM66_2088 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D VCM66_A0471 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D VCM66_1792 pflA; pyruvate formate-lyase 1 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VCM66_0490 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D VCM66_1078 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D VCM66_A0869 hutW; hutW protein K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D VCM66_1296 putative acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D VCM66_A0795 hexapeptide-repeat containing-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VCM66_0914 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D VCM66_0613 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D VCM66_A0318 GCN5-related N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D VCM66_1172 conserved hypothetical protein K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D VCM66_1675 aat; leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D VCM66_1676 arginyl-tRNA-protein transferase-related protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D VCM66_1475 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VCM66_1904 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VCM66_0131 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VCM66_0632 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D VCM66_2212 apbE; thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VCM66_A0945 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D VCM66_2361 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D VCM66_2308 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VCM66_1855 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D VCM66_1763 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VCM66_1862 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VCM66_1132 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D VCM66_1303 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D VCM66_0741 conserved hypothetical protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D VCM66_0455 dns; extracellular deoxyribonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D VCM66_0103 Putative deoxyribonuclease yabD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VCM66_2276 Putative deoxyribonuclease yjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VCM66_1938 Putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VCM66_2021 putative esterase/lipase K01175 ybfF; esterase [EC:3.1.-.-]
D VCM66_2199 conserved hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D VCM66_1029 putative chitinase K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D VCM66_A0658 chitodextrinase K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D VCM66_A0148 def-2; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VCM66_0046 def-1; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VCM66_1235 conserved hypothetical protein K18454 deaA; chitin disaccharide deacetylase [EC:3.5.1.105]
D VCM66_0406 conserved hypothetical protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D VCM66_1516 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D VCM66_2434 conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VCM66_2363 conserved hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D VCM66_1951 Maf/YceF/YhdE family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D VCM66_A0722 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VCM66_A0171 MoxR-related protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VCM66_2163 decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D VCM66_A0187 conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D VCM66_A0563 aminotransferase, class III K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D VCM66_2232 aminotransferase, class V K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D VCM66_1712 conserved hypothetical protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D VCM66_A0619 peptidyl-prolyl cis-trans isomerase-related protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D VCM66_2463 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D VCM66_1483 ligA-2; DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D VCM66_0970 RnfD-related protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D VCM66_0971 RnfC-related protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D VCM66_0972 RnfB-related protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D VCM66_2218 nqrA; NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D VCM66_2217 nqrB; NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D VCM66_2216 nqrC; NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D VCM66_2215 nqrD; NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D VCM66_2214 nqrE; NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D VCM66_2213 nqrF; NADH:ubiquinone oxidoreductase, Na translocating, beta subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D VCM66_1393 cation transport ATPase, E1-E2 family K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D VCM66_0988 cation transport ATPase, E1-E2 family K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D VCM66_0555 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D VCM66_A0668 torT; periplasmic protein TorT K11930 torT; periplasmic protein TorT
D VCM66_0695 acetoin utilization protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D VCM66_1461 fdhD; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D VCM66_0711 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D VCM66_0762 ferredoxin K05524 fdxA; ferredoxin
D VCM66_1209 putative iron-sulfur cluster-binding protein K11107 yfaE; ferredoxin
D VCM66_0969 RnfG-related protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D VCM66_0968 RnfE-related protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D VCM66_0973 RnfA-related protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D VCM66_0002 mioC; mioC protein K06205 mioC; MioC protein
D VCM66_2343 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D VCM66_0707 NifU-related protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D VCM66_A0853 conserved hypothetical protein K15536 cybC; soluble cytochrome b562
D VCM66_A0635 napD; napD protein K02570 napD; periplasmic nitrate reductase NapD
D VCM66_A0634 napF; iron-sulfur cluster-binding protein NapF K02572 napF; ferredoxin-type protein NapF
D VCM66_1634 napE; napE protein K02571 napE; periplasmic nitrate reductase NapE
D VCM66_2023 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D VCM66_A0638 napC; periplasmic nitrate reductase, cytochrome c-type protein K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D VCM66_0925 cysZ; cysZ protein K06203 cysZ; CysZ protein
D VCM66_A0850 glyoxylase I family protein K08234 yaeR; glyoxylase I family protein
D VCM66_0446 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D VCM66_1837 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D VCM66_1836 conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D VCM66_0117 hemY; hemY protein K02498 hemY; HemY protein
D VCM66_0085 putative ubiquinone biosynthesis protein AarF K03688 ubiB; ubiquinone biosynthesis protein
D VCM66_0084 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D VCM66_0162 conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D VCM66_0612 conserved hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D VCM66_0837 Aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
D VCM66_0820 Aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D VCM66_A0978 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D VCM66_A0533 conserved hypothetical protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D VCM66_A0893 cold shock domain family protein K03704 cspA; cold shock protein
D VCM66_A0164 cspA; cold shock transcriptional regulator CspA K03704 cspA; cold shock protein
D VCM66_1098 cspD; cold shock-like protein CspD K03704 cspA; cold shock protein
D VCM66_A0180 cold shock DNA-binding domain protein K03704 cspA; cold shock protein
D VCM66_0314 rsd; regulator of sigma D K07740 rsd; regulator of sigma D
D VCM66_0564 glnB-1; nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D VCM66_2636 conserved hypothetical protein K06959 tex; protein Tex
C 99974 Translation
D VCM66_0249 conserved hypothetical protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D VCM66_1603 hslJ; heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D VCM66_1099 ATP-dependent Clp protease adaptor protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D VCM66_1847 tig; trigger factor K03545 tig; trigger factor
D VCM66_0805 smpB; small protein B K03664 smpB; SsrA-binding protein
D VCM66_0032 ComM-related protein K07391 comM; magnesium chelatase family protein
D VCM66_A0909 SM-20-related protein K07394 K07394; SM-20-related protein
D VCM66_A0861 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D VCM66_A0797 conserved hypothetical protein K07397 yhfA; putative redox protein
D VCM66_2640 conserved hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
D VCM66_0938 selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein
C 99976 Replication and repair
D VCM66_1020 methylated-DNA--protein-cysteine methyltransferase-related protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D VCM66_0855 xni; exodeoxyribonuclease IX K01146 xni; protein Xni
D VCM66_0205 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VCM66_1724 putative DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VCM66_0082 putative DNA recombination protein rmuC K09760 rmuC; DNA recombination protein RmuC
D VCM66_A0503 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D VCM66_0538 conserved hypothetical protein K07460 yraN; putative endonuclease
D VCM66_A0697 conserved hypothetical protein K07461 K07461; putative endonuclease
D VCM66_0048 smf; smf protein K04096 smf; DNA processing protein
D VCM66_1064 conserved hypothetical protein K07478 ycaJ; putative ATPase
D VCM66_0050 DNA topoisomerase I-related protein K07479 yrdD; putative DNA topoisomerase
D VCM66_A0281 ISVch5 transposase K07481 K07481; transposase, IS5 family
D VCM66_A0434 ISVch5 transposase K07481 K07481; transposase, IS5 family
D VCM66_1728 orfA; ISVch4 transposase, OrfA K07483 K07483; transposase
D VCM66_1420 ISVch4 transposase, OrfA K07483 K07483; transposase
D VCM66_A0751 orfA; ISVch4 transposase, OrfA K07483 K07483; transposase
D VCM66_A0466 orfA; ISVch4 transposase, OrfA K07483 K07483; transposase
D VCM66_A0397 ISVch4 transposase, OrfB K07483 K07483; transposase
D VCM66_A0273 ISVch4 transposase, OrfB K07483 K07483; transposase
D VCM66_0827 tnpA; IS1004 transposase K07491 rayT; REP-associated tyrosine transposase
D VCM66_A0453 IS1004 transposase K07491 rayT; REP-associated tyrosine transposase
D VCM66_A0198 tnpA; IS1004 transposase K07491 rayT; REP-associated tyrosine transposase
D VCM66_1798 IS1004 transposase K07491 rayT; REP-associated tyrosine transposase
D VCM66_1421 ISVch4 transposase, OrfB K07497 K07497; putative transposase
D VCM66_A0750 orfB; ISVch4 transposase, OrfB K07497 K07497; putative transposase
D VCM66_A0467 orfB; ISVch4 transposase, OrfB K07497 K07497; putative transposase
D VCM66_A0396 ISVch4 transposase, OrfA K07497 K07497; putative transposase
D VCM66_A0272 ISVch4 transposase, OrfA K07497 K07497; putative transposase
D VCM66_1727 orfB; ISVch4 transposase, OrfB K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D VCM66_1618 pspA; phage shock protein A K03969 pspA; phage shock protein A
D VCM66_A0098 pspE; phage shock protein E K03972 pspE; phage shock protein E
D VCM66_1010 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D VCM66_1737 phrB-1; deoxyribodipyrimidine photolyase K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D VCM66_0871 putative multidrug resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D VCM66_1234 transporter, BCCT family K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VCM66_0944 proton/peptide symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VCM66_2365 pho4 family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D VCM66_A0625 sodium/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D VCM66_1609 putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VCM66_2206 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VCM66_1936 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VCM66_0742 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VCM66_1377 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VCM66_2279 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VCM66_0620 brnQ; branched chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D VCM66_2275 NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VCM66_1877 NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VCM66_A0175 NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VCM66_1101 Putative transport protein K07085 K07085; putative transport protein
C 99978 Cell growth
D VCM66_1640 yciB; intracellular sepatation protein A K06190 ispZ; intracellular septation protein
D VCM66_A0736 conserved hypothetical protein K06351 kipI; inhibitor of KinA
D VCM66_0039 SpoOM-related protein K06377 spo0M; sporulation-control protein
D VCM66_1797 conserved hypothetical protein K06415 spoVR; stage V sporulation protein R
D VCM66_0319 NlpD-related protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D VCM66_1818 conserved hypothetical protein K07337 K07337; penicillin-binding protein activator
D VCM66_1662 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D VCM66_1109 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D VCM66_0860 syd; syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D VCM66_1440 conserved hypothetical protein K03607 proQ; ProP effector
D VCM66_0076 uspA; universal stress protein A K06149 uspA; universal stress protein A
D VCM66_1389 Universal stress protein E K14055 uspE; universal stress protein E
D VCM66_0413 Universal stress protein F K14061 uspF; universal stress protein F
D VCM66_2664 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D VCM66_2224 putative transcriptional activator K07167 chrR; putative transcriptional regulator
D VCM66_0917 phoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D VCM66_2429 PhoH-like protein K07175 phoH2; PhoH-like ATPase
D VCM66_1795 conserved hypothetical protein K07180 prkA; serine protein kinase
D VCM66_0285 conserved hypothetical protein K07182 K07182; CBS domain-containing protein
D VCM66_1246 conserved hypothetical protein K07182 K07182; CBS domain-containing protein
D VCM66_2366 conserved hypothetical protein K07184 ygiM; SH3 domain protein
D VCM66_2269 putative smp protein K07186 smp; membrane protein
D VCM66_1450 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D VCM66_1063 lolA; outer membrane lipoproteins carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D VCM66_2104 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D VCM66_1972 vacJ; vacJ lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D VCM66_2174 ompH; outer membrane protein OmpH K06142 hlpA; outer membrane protein
D VCM66_0491 nlpD; lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D VCM66_0606 putative lipoprotein K05803 nlpI; lipoprotein NlpI
D VCM66_A0826 ompW; outer membrane protein OmpW K07275 ompW; outer membrane protein
D VCM66_0354 conserved hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D VCM66_1911 putative outer membrane lipoprotein Slp K07285 slp; outer membrane lipoprotein
D VCM66_2221 putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D VCM66_0994 asmA; asmA protein K07289 asmA; AsmA protein
D VCM66_0931 putative Inner membrane protein K07340 ybbJ; inner membrane protein
D VCM66_1547 conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D VCM66_1598 conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D VCM66_1504 conserved hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D VCM66_1977 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D VCM66_1974 cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D VCM66_0716 Putative HTH-type transcriptional regulator yfgA K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D VCM66_0685 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D VCM66_0348 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D VCM66_1243 mdoG; periplasmic glucans biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D VCM66_A0505 conserved hypothetical protein K05794 terC; tellurite resistance protein TerC
D VCM66_0688 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D VCM66_0427 apaG; apaG protein K06195 apaG; ApaG protein
D VCM66_0123 cyaY; cyaY protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D VCM66_A0868 hutX; hutX protein K07227 chuX; heme iron utilization protein
D VCM66_1219 putative iron-regulated protein A K07231 K07231; putative iron-regulated protein
D VCM66_2253 conserved hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D VCM66_A0591 glpM; glpM protein K02442 glpM; membrane protein GlpM
D VCM66_0959 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production
D VCM66_1386 putative bax protein K03796 bax; Bax protein
D VCM66_1693 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D VCM66_A1006 oxidoreductase, Gfo/Idh/MocA family K03810 mviM; virulence factor
D VCM66_2485 elaA; elaA protein K02348 elaA; ElaA protein
D VCM66_A0854 conserved hypothetical protein K04477 ycdX; putative hydrolase
D VCM66_2284 formate acetyl transferase-related protein K06866 grcA; autonomous glycyl radical cofactor
D VCM66_2259 methionyl-tRNA synthetase-related protein K06878 K06878; tRNA-binding protein
D VCM66_0561 conserved hypothetical protein K07001 K07001; NTE family protein
D VCM66_1584 conserved hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D VCM66_0585 hesB family protein K15724 erpA; iron-sulfur cluster insertion protein
D VCM66_2662 rbn; ribonuclease BN K07058 K07058; membrane protein
D VCM66_2616 fsxA; fxsA protein K07113 fxsA; UPF0716 protein FxsA
D VCM66_2233 SufE-like protein K02426 sufE; cysteine desulfuration protein SufE
D VCM66_1214 conserved hypothetical protein K07146 K07146; UPF0176 protein
D VCM66_1083 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D VCM66_0336 slyX; slyX protein K03745 slyX; SlyX protein
D VCM66_0049 smg; smg protein K03747 smg; Smg protein
D VCM66_A0759 creA; creA protein K05805 creA; CreA protein
D VCM66_0456 putative sprT protein K02742 sprT; SprT protein
D VCM66_0958 dedD; dedD protein K03749 dedD; DedD protein
D VCM66_2547 DamX-related protein K03112 damX; DamX protein
D VCM66_1141 sanA; sanA protein K03748 sanA; SanA protein
D VCM66_1692 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D VCM66_1443 PqiA family protein K03808 pqiA; paraquat-inducible protein A
D VCM66_A0039 conserved hypothetical protein K08974 K08974; putative membrane protein
D VCM66_A0748 conserved hypothetical protein K08984 yjdF; putative membrane protein
D VCM66_0132 conserved hypothetical protein K08985 K08985; putative lipoprotein
D VCM66_1262 conserved hypothetical protein K08990 ycjF; putative membrane protein
D VCM66_0145 conserved hypothetical protein K08993 yhhL; putative membrane protein
D VCM66_1775 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D VCM66_1019 lipoprotein-related protein K09914 K09914; putative lipoprotein
D VCM66_A0985 putative maltose operon periplasmic protein K05775 malM; maltose operon periplasmic protein
D VCM66_A0508 phnA; phnA protein K06193 phnA; protein PhnA
D VCM66_1527 conserved hypothetical protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D VCM66_1524 ankB; ankB protein K06867 K06867; uncharacterized protein
D VCM66_1261 conserved hypothetical protein K06918 K06918; uncharacterized protein
D VCM66_A0089 conserved hypothetical protein K06933 K06933; uncharacterized protein
D VCM66_A0546 conserved hypothetical protein K06934 K06934; uncharacterized protein
D VCM66_1602 conserved hypothetical protein K06938 K06938; uncharacterized protein
D VCM66_A0351 hypothetical protein K06938 K06938; uncharacterized protein
D VCM66_A0426 hypothetical protein K06938 K06938; uncharacterized protein
D VCM66_1012 putative proteinase inhibitor K06940 K06940; uncharacterized protein
D VCM66_1729 conserved hypothetical protein K06946 K06946; uncharacterized protein
D VCM66_A0323 Metal-dependent phosphohydrolase with HD region, subdomain K06950 K06950; uncharacterized protein
D VCM66_1076 conserved hypothetical protein K06954 K06954; uncharacterized protein
D VCM66_1190 sodium/dicarboxylate symporter K06956 K06956; uncharacterized protein
D VCM66_A0042 conserved hypothetical protein K06975 K06975; uncharacterized protein
D VCM66_2205 conserved hypothetical protein K06987 K06987; uncharacterized protein
D VCM66_A0295 Glyoxalase/bleomycin resistance protein K06996 K06996; uncharacterized protein
D VCM66_A0603 conserved hypothetical protein K06996 K06996; uncharacterized protein
D VCM66_A0390 Glyoxalase/bleomycin resistance protein K06996 K06996; uncharacterized protein
D VCM66_1816 conserved hypothetical protein K07000 K07000; uncharacterized protein
D VCM66_2355 putative Esterase K07000 K07000; uncharacterized protein
D VCM66_2541 extracellular nuclease-related protein K07004 K07004; uncharacterized protein
D VCM66_2520 putative Inner membrane protein K07014 K07014; uncharacterized protein
D VCM66_1965 putative Inner membrane protein K07014 K07014; uncharacterized protein
D VCM66_2530 conserved hypothetical protein K07019 K07019; uncharacterized protein
D VCM66_0728 putative Inner membrane protein K07034 K07034; uncharacterized protein
D VCM66_1755 conserved hypothetical protein K07039 K07039; uncharacterized protein
D VCM66_1062 preprotein translocase SecA subunit-related protein K07039 K07039; uncharacterized protein
D VCM66_2525 conserved hypothetical protein K07070 K07070; uncharacterized protein
D VCM66_0936 rcp; rcp protein K07071 K07071; uncharacterized protein
D VCM66_A0142 immunogenic protein K07080 K07080; uncharacterized protein
D VCM66_0415 immunogenic protein K07080 K07080; uncharacterized protein
D VCM66_A1010 conserved hypothetical protein K07090 K07090; uncharacterized protein
D VCM66_1779 putative Inner membrane protein K07090 K07090; uncharacterized protein
D VCM66_2307 putative Inner membrane protein K07090 K07090; uncharacterized protein
D VCM66_0631 conserved hypothetical protein K07090 K07090; uncharacterized protein
D VCM66_A0032 conserved hypothetical protein K07093 K07093; uncharacterized protein
D VCM66_0937 putative phosphodiesterase K07095 K07095; uncharacterized protein
D VCM66_2471 conserved hypothetical protein K07109 K07109; uncharacterized protein
D VCM66_A0598 conserved hypothetical protein K07112 K07112; uncharacterized protein
D VCM66_A0599 conserved hypothetical protein K07112 K07112; uncharacterized protein
D VCM66_A1012 conserved hypothetical protein K07118 K07118; uncharacterized protein
D VCM66_A0587 conserved hypothetical protein K07120 K07120; uncharacterized protein
D VCM66_0539 putative lipoprotein K07121 K07121; uncharacterized protein
D VCM66_1149 conserved hypothetical protein K07126 K07126; uncharacterized protein
D VCM66_A0984 conserved hypothetical protein K07126 K07126; uncharacterized protein
D VCM66_A0021 glutathione S-transfersae-related protein K07136 K07136; uncharacterized protein
D VCM66_0764 conserved hypothetical protein K07137 K07137; uncharacterized protein
D VCM66_2294 conserved hypothetical protein K07139 K07139; uncharacterized protein
D VCM66_A0884 conserved hypothetical protein K07140 K07140; MOSC domain-containing protein
D VCM66_2226 conserved hypothetical protein K07157 K07157; uncharacterized protein
D VCM66_0005 conserved hypothetical protein K08998 K08998; uncharacterized protein
D VCM66_0477 conserved hypothetical protein K09117 K09117; uncharacterized protein
D VCM66_0443 conserved hypothetical protein K09131 K09131; uncharacterized protein
D VCM66_0901 conserved hypothetical protein K09158 K09158; uncharacterized protein
D VCM66_1013 conserved hypothetical protein K09160 K09160; uncharacterized protein
D VCM66_1794 conserved hypothetical protein K09161 K09161; uncharacterized protein
D VCM66_1077 conserved hypothetical protein K09701 K09701; uncharacterized protein
D VCM66_A0553 hlx; hemolysin K09712 K09712; uncharacterized protein
D VCM66_A1042 conserved hypothetical protein K09749 K09749; uncharacterized protein
D VCM66_0838 conserved hypothetical protein K09768 K09768; uncharacterized protein
D VCM66_1642 conserved hypothetical protein K09780 K09780; uncharacterized protein
D VCM66_A0890 conserved hypothetical protein K09781 K09781; uncharacterized protein
D VCM66_1796 conserved hypothetical protein K09786 K09786; uncharacterized protein
D VCM66_1007 putative Inner membrane protein K09790 K09790; uncharacterized protein
D VCM66_1800 conserved hypothetical protein K09791 K09791; uncharacterized protein
D VCM66_1391 conserved hypothetical protein K09792 K09792; uncharacterized protein
D VCM66_A0165 conserved hypothetical protein K09797 K09797; uncharacterized protein
D VCM66_0807 conserved hypothetical protein K09801 K09801; uncharacterized protein
D VCM66_A0700 conserved hypothetical protein K09802 K09802; uncharacterized protein
D VCM66_A0383 conserved hypothetical protein K09803 K09803; uncharacterized protein
D VCM66_0468 conserved hypothetical protein K09807 K09807; uncharacterized protein
D VCM66_1272 conserved hypothetical protein K09824 virK; uncharacterized protein
D VCM66_1277 conserved hypothetical protein K05952 K05952; uncharacterized protein
D VCM66_2211 conserved hypothetical protein K05952 K05952; uncharacterized protein
D VCM66_1446 conserved hypothetical protein K00243 K00243; uncharacterized protein
D VCM66_1522 conserved hypothetical protein K09822 K09822; uncharacterized protein
D VCM66_1694 putative lipoprotein K09857 K09857; uncharacterized protein
D VCM66_1820 conserved hypothetical protein K09859 K09859; uncharacterized protein
D VCM66_2278 conserved hypothetical protein K09861 K09861; uncharacterized protein
D VCM66_2352 conserved hypothetical protein K09862 K09862; uncharacterized protein
D VCM66_0253 conserved hypothetical protein K09891 K09891; uncharacterized protein
D VCM66_0114 conserved hypothetical protein K09894 K09894; uncharacterized protein
D VCM66_2399 conserved hypothetical protein K09895 K09895; uncharacterized protein
D VCM66_0037 conserved hypothetical protein K09896 K09896; uncharacterized protein
D VCM66_A0980 conserved hypothetical protein K09897 K09897; uncharacterized protein
D VCM66_2532 conserved hypothetical protein K09898 K09898; uncharacterized protein
D VCM66_1055 conserved hypothetical protein K09899 K09899; uncharacterized protein
D VCM66_1163 conserved hypothetical protein K09901 K09901; uncharacterized protein
D VCM66_1881 conserved hypothetical protein K09902 K09902; uncharacterized protein
D VCM66_1964 conserved hypothetical protein K09904 K09904; uncharacterized protein
D VCM66_1997 conserved hypothetical protein K09907 K09907; uncharacterized protein
D VCM66_0525 Putative cytochrome d ubiquinol oxidase subunit III K09908 K09908; uncharacterized protein
D VCM66_A0025 conserved hypothetical protein K09909 K09909; uncharacterized protein
D VCM66_1776 conserved hypothetical protein K09909 K09909; uncharacterized protein
D VCM66_0563 conserved hypothetical protein K09910 K09910; uncharacterized protein
D VCM66_1424 conserved hypothetical protein K09911 K09911; uncharacterized protein
D VCM66_A0698 conserved hypothetical protein K09915 K09915; uncharacterized protein
D VCM66_1920 conserved hypothetical protein K09916 K09916; uncharacterized protein
D VCM66_A0528 conserved hypothetical protein K09917 K09917; uncharacterized protein
D VCM66_2249 conserved hypothetical protein K09918 K09918; uncharacterized protein
D VCM66_2357 conserved hypothetical protein K09920 K09920; uncharacterized protein
D VCM66_0127 conserved hypothetical protein K09921 K09921; uncharacterized protein
D VCM66_1514 conserved hypothetical protein K09922 K09922; uncharacterized protein
D VCM66_1394 conserved hypothetical protein K09926 K09926; uncharacterized protein
D VCM66_1804 conserved hypothetical protein K09928 K09928; uncharacterized protein
D VCM66_0335 conserved hypothetical protein K09937 K09937; uncharacterized protein
D VCM66_2091 conserved hypothetical protein K09938 K09938; uncharacterized protein
D VCM66_0268 conserved hypothetical protein K09939 K09939; uncharacterized protein
D VCM66_1559 conserved hypothetical protein K09941 K09941; uncharacterized protein
D VCM66_1222 conserved hypothetical protein K09947 K09947; uncharacterized protein
D VCM66_1887 conserved hypothetical protein K09948 K09948; uncharacterized protein
D VCM66_2476 conserved hypothetical protein K09950 K09950; uncharacterized protein
D VCM66_A0161 conserved hypothetical protein K09954 K09954; uncharacterized protein
D VCM66_A0229 conserved hypothetical protein K09956 K09956; uncharacterized protein
D VCM66_A0307 conserved hypothetical protein K09962 K09962; uncharacterized protein
D VCM66_0760 conserved hypothetical protein K09964 K09964; uncharacterized protein
D VCM66_2143 conserved hypothetical protein K09973 K09973; uncharacterized protein
D VCM66_2018 conserved hypothetical protein K09977 K09977; uncharacterized protein
D VCM66_2364 conserved hypothetical protein K07220 K07220; uncharacterized protein
D VCM66_1221 conserved hypothetical protein K07338 K07338; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024