+F Repair protein KO
#
DNA Repair and Recombination Proteins - Wallemia mellicola
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D WALSEDRAFT_38998 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E WALSEDRAFT_21797 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E WALSEDRAFT_47705 DNA glycosylase K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E WALSEDRAFT_47162 DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E WALSEDRAFT_59847 DNA glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E WALSEDRAFT_51169 DNase I-like protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E WALSEDRAFT_63512 DNase I-like protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E WALSEDRAFT_65944 DNase I-like protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F WALSEDRAFT_40048 putative delta DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F WALSEDRAFT_57598 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E DNA polymerase epsilon complex
F WALSEDRAFT_40503 putative DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F WALSEDRAFT_54005 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F WALSEDRAFT_60302 histone-fold-containing protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F WALSEDRAFT_56082 histone-fold-containing protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E WALSEDRAFT_61641 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E WALSEDRAFT_41971 PIN domain-like protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E WALSEDRAFT_22184 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E WALSEDRAFT_33207 phospholipase D/nuclease K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E WALSEDRAFT_70138 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E WALSEDRAFT_58584 PNK3P-domain-containing protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F WALSEDRAFT_57216 Rad4-domain-containing protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F WALSEDRAFT_61023 UV excision repair protein Rad23 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F WALSEDRAFT_27573 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F WALSEDRAFT_70412 hypothetical protein K10609 CUL4; cullin 4
F WALSEDRAFT_33953 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F WALSEDRAFT_57493 RNI-like protein K15082 RAD7; DNA repair protein RAD7
F WALSEDRAFT_20372 hypothetical protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F WALSEDRAFT_52154 beta and beta-prime subunits of DNA dependent RNA-polymerase K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F WALSEDRAFT_32026 beta and beta-prime subunits of DNA dependent RNA-polymerase K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F WALSEDRAFT_60545 DNA-directed RNA polymerase II subunit RPB3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F WALSEDRAFT_59044 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F WALSEDRAFT_59145 RPB5 subunit of DNA-directed RNA polymerase K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F WALSEDRAFT_39429 RNA polymerase Rpb6 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F WALSEDRAFT_60067 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F WALSEDRAFT_48234 RNA polymerase K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F WALSEDRAFT_15227 DNA-directed RNA polymerase II complex subunit Rpb9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F WALSEDRAFT_37960 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F WALSEDRAFT_61140 RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F WALSEDRAFT_27573 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F WALSEDRAFT_70412 hypothetical protein K10609 CUL4; cullin 4
F WALSEDRAFT_33953 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E Other TCR factor
D TFIIH complex
E WALSEDRAFT_67911 DNA repair helicase rad25 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E WALSEDRAFT_60641 DNA repair helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E WALSEDRAFT_70688 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E WALSEDRAFT_54919 TFIIH basal transcription factor complex, subunit SSL1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E WALSEDRAFT_68167 transcription factor Tfb4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E WALSEDRAFT_18669 transcription factor Tfb2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E WALSEDRAFT_17645 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E WALSEDRAFT_60500 HOR2; Pkinase-domain-containing protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E WALSEDRAFT_60218 cyclin-like protein K06634 CCNH; cyclin H
E WALSEDRAFT_59488 CDK-activating kinase assembly factor K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E WALSEDRAFT_60479 replication factor-a protein K07466 RFA1; replication factor A1
E WALSEDRAFT_60032 replication protein A, subunit RPA32 K10739 RFA2; replication factor A2
E WALSEDRAFT_68087 replication factor A protein 3 K10740 RPA3; replication factor A3
D Other NER factors
E WALSEDRAFT_70387 DNA repair protein K10847 XPA; DNA-repair protein complementing XP-A cells
E WALSEDRAFT_70857 DNA repair protein rad10 K10849 ERCC1; DNA excision repair protein ERCC-1
E WALSEDRAFT_51071 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E WALSEDRAFT_66795 PIN domain-like protein K10846 ERCC5; DNA excision repair protein ERCC-5
E WALSEDRAFT_22184 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E WALSEDRAFT_62202 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E WALSEDRAFT_68542 Cullin-domain-containing protein K03869 CUL3; cullin 3
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E WALSEDRAFT_35672 DNA mismatch repair protein K08735 MSH2; DNA mismatch repair protein MSH2
E WALSEDRAFT_21205 DNA mismatch repair protein Msh6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E WALSEDRAFT_55585 DNA mismatch repair protein MutL K08734 MLH1; DNA mismatch repair protein MLH1
E WALSEDRAFT_38196 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2
D DNA polymerase delta complex
E WALSEDRAFT_40048 putative delta DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E WALSEDRAFT_57598 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
D RPA (replication factor A)
E WALSEDRAFT_60479 replication factor-a protein K07466 RFA1; replication factor A1
E WALSEDRAFT_60032 replication protein A, subunit RPA32 K10739 RFA2; replication factor A2
E WALSEDRAFT_68087 replication factor A protein 3 K10740 RPA3; replication factor A3
D RFC (replication factor C)
E WALSEDRAFT_17366 DNA replication factor C, large subunit K10754 RFC1; replication factor C subunit 1
E WALSEDRAFT_67493 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
E WALSEDRAFT_59583 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
E WALSEDRAFT_27657 DNA clamp loader K10756 RFC3_5; replication factor C subunit 3/5
E WALSEDRAFT_34503 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E WALSEDRAFT_61641 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E WALSEDRAFT_68133 PIN domain-like protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E WALSEDRAFT_22184 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E WALSEDRAFT_60663 WD40 repeat-like protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E WALSEDRAFT_28834 DNA repair exonuclease K10865 MRE11; double-strand break repair protein MRE11
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E WALSEDRAFT_28834 DNA repair exonuclease K10865 MRE11; double-strand break repair protein MRE11
D BRCA complex
E WALSEDRAFT_37947 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein
D RecA family proteins
D Rad52 family proteins
D Rad54 family proteins
E WALSEDRAFT_37435 DNA supercoiling K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E WALSEDRAFT_67840 hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E WALSEDRAFT_68263 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E WALSEDRAFT_68263 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E WALSEDRAFT_51054 prokaryotic type I DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
D RPA (replication factor A)
E WALSEDRAFT_60479 replication factor-a protein K07466 RFA1; replication factor A1
E WALSEDRAFT_60032 replication protein A, subunit RPA32 K10739 RFA2; replication factor A2
E WALSEDRAFT_68087 replication factor A protein 3 K10740 RPA3; replication factor A3
D Protein phosphatase 4
E WALSEDRAFT_53899 Metallo-dependent phosphatase K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E WALSEDRAFT_39318 DUF625-domain-containing protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E WALSEDRAFT_36497 P-loop containing nucleoside triphosphate hydrolase protein K22803 SMC5; structural maintenance of chromosomes protein 5
E WALSEDRAFT_59912 P-loop containing nucleoside triphosphate hydrolase protein K22804 SMC6; structural maintenance of chromosomes protein 6
E WALSEDRAFT_26633 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E WALSEDRAFT_27004 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E WALSEDRAFT_34286 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E WALSEDRAFT_68056 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E WALSEDRAFT_44472 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E WALSEDRAFT_61467 MRG-domain-containing protein K11339 MORF4L1; mortality factor 4-like protein 1
E WALSEDRAFT_35813 HD-domain/PDEase-like protein K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E WALSEDRAFT_62680 WLM-domain-containing protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E WALSEDRAFT_28344 P-loop containing nucleoside triphosphate hydrolase protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E WALSEDRAFT_59078 ATP-dependent DNA helicase ii K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E WALSEDRAFT_68631 SPOC domain-like protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E WALSEDRAFT_28834 DNA repair exonuclease K10865 MRE11; double-strand break repair protein MRE11
D DNA Ligase 4 complex
E WALSEDRAFT_59662 ATP-dependent DNA ligase K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E WALSEDRAFT_60137 DNA ligase/mRNA capping enzyme K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
D Other NHEJ factors
E WALSEDRAFT_70138 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
E WALSEDRAFT_68263 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E WALSEDRAFT_51054 prokaryotic type I DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
D FANCD2-I complex
D Downstream FA components
E WALSEDRAFT_37947 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein
D Other FA pathway factors
E WALSEDRAFT_57755 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E WALSEDRAFT_59416 hypothetical protein K11137 TELO2; telomere length regulation protein
E WALSEDRAFT_69219 WD40 repeat-like protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E WALSEDRAFT_59228 Metallo-dependent phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
D Ubiquitin ligases
D Others
E WALSEDRAFT_67318 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E WALSEDRAFT_54366 WD40 repeat-like protein K24752 WDR70; WD repeat-containing protein 70
E WALSEDRAFT_60663 WD40 repeat-like protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D WALSEDRAFT_66948 DNA/RNA polymerase K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D WALSEDRAFT_58331 DNA/RNA polymerase K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D WALSEDRAFT_53850 DNA/RNA polymerase K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D WALSEDRAFT_56379 DNA repair protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D WALSEDRAFT_58541 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D WALSEDRAFT_33110 ubiquitin-conjugating enzyme K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D WALSEDRAFT_44505 hypothetical protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D WALSEDRAFT_29185 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D WALSEDRAFT_66921 UBC-like protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D WALSEDRAFT_59867 putative ubiquitin-conjugating enzyme E2 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D WALSEDRAFT_61641 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D WALSEDRAFT_66875 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D WALSEDRAFT_59100 hypothetical protein K10903 HUS1; HUS1 checkpoint protein
D WALSEDRAFT_59040 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D WALSEDRAFT_20528 checkpoint protein Rad24 K06662 HRAD17; cell cycle checkpoint protein
D WALSEDRAFT_67493 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D WALSEDRAFT_59583 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D WALSEDRAFT_27657 DNA clamp loader K10756 RFC3_5; replication factor C subunit 3/5
D WALSEDRAFT_34503 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D WALSEDRAFT_59040 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D WALSEDRAFT_60100 timeless-domain-containing protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D WALSEDRAFT_59174 Swi3-domain-containing protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D WALSEDRAFT_69265 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D WALSEDRAFT_59416 hypothetical protein K11137 TELO2; telomere length regulation protein
D WALSEDRAFT_61287 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D WALSEDRAFT_32790 hypothetical protein K23388 UBL4; ubiquitin-like protein 4
D WALSEDRAFT_60894 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D WALSEDRAFT_45627 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D WALSEDRAFT_60167 Rhodanese-like protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D WALSEDRAFT_20155 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D WALSEDRAFT_61603 Pkinase-domain-containing protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
D WALSEDRAFT_60937 AAA-domain-containing protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D WALSEDRAFT_22728 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D WALSEDRAFT_56041 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D WALSEDRAFT_59919 DRMBL-domain-containing protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D WALSEDRAFT_68944 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
D WALSEDRAFT_67448 hypothetical protein K21813 ENDOV; endonuclease V [EC:3.1.26.-]
C Helicases
C PSO4 complex
D WALSEDRAFT_32658 WD40 repeat-like protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D WALSEDRAFT_60916 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D WALSEDRAFT_60045 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D WALSEDRAFT_55079 WD40 repeat-like protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D WALSEDRAFT_49586 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D WALSEDRAFT_9709 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D WALSEDRAFT_31633 hypothetical protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D WALSEDRAFT_59996 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D WALSEDRAFT_38998 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E WALSEDRAFT_21797 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E WALSEDRAFT_30809 DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E WALSEDRAFT_59847 DNA glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D WALSEDRAFT_49586 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D WALSEDRAFT_9709 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024