+D GENES KO #

  KEGG Orthology (KO) - Xanthomonas citri pv. citri UI7

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:xcu00010] D J159_02217 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03231 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03277 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_01933 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J159_03597 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J159_00236 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J159_03503 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J159_02870 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J159_03511 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J159_03506 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J159_03040 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J159_01861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J159_03504 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J159_02188 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J159_00695 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J159_03818 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_00770 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00854 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_02991 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J159_00142 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_00241 NAD-dependent aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D J159_04308 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J159_01425 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J159_03587 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D J159_03736 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04063 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04427 lytic murein transglycosylase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D J159_03242 Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] C 00020 Citrate cycle (TCA cycle) [PATH:xcu00020] D J159_03548 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D J159_02026 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D J159_02029 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J159_03985 isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J159_01170 Isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D J159_01683 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D J159_01682 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_03396 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J159_03397 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J159_02224 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J159_02226 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J159_02222 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J159_02223 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J159_01603 fumarase, class I, homodimeric K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J159_01690 fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J159_01130 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J159_00695 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J159_03818 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:xcu00030] D J159_01933 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J159_02218 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J159_04208 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J159_02216 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D J159_00798 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D J159_00593 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J159_03531 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D J159_01026 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D J159_03572 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D J159_00284 Ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D J159_00942 Sugar kinase, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15] D J159_03241 Sugar kinase, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15] D J159_03736 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04063 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_01073 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J159_02215 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D J159_02214 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D J159_01782 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D J159_03372 quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D J159_04378 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J159_00667 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J159_02889 Lactate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J159_04329 gluconate kinase, SKI family K00851 idnK; gluconokinase [EC:2.7.1.12] D J159_00256 Sugar kinase, ribokinase family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D J159_03503 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J159_00236 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J159_03597 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:xcu00040] D J159_03719 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J159_03146 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J159_02532 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J159_00282 5-keto 4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D J159_00283 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D J159_00779 Endopolygalacturonase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15] D J159_02534 Endopolygalacturonase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15] D J159_04381 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D J159_04361 D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D J159_04364 Mannitol-1-phosphate/altronate dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D J159_03738 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J159_01700 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J159_02452 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J159_00593 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J159_04375 Sugar (pentulose and hexulose) kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D J159_01918 D-xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D J159_04357 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J159_01919 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J159_02711 NAD-dependent aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D J159_04374 Ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:xcu00051] D J159_01940 Cellulase (glycosyl hydrolase family 5) K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J159_01706 Sugar kinase, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J159_03737 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D J159_03736 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04063 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04374 Ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D J159_04315 L-fucose dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D J159_00273 putative oxidoreductases (related to aryl-alcohol dehydrogenases) K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D J159_04316 L-fuconolactonase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D J159_04319 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68] D J159_04317 2-dehydro-3-deoxy-L-fuconate dehydrogenase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D J159_04318 2,4-diketo-3-deoxy-L-fuconate hydrolase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D J159_03597 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J159_00236 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J159_02665 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D J159_04357 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J159_01919 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D J159_03503 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J159_02870 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J159_00284 Ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D J159_02666 PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J159_03137 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:xcu00052] D J159_01425 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J159_03892 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J159_02452 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J159_03736 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04063 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_02217 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03231 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03277 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_04380 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_01448 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_00826 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_03239 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D J159_03245 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D J159_03894 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J159_03597 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J159_00919 galactose 1-dehydrogenase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48] D J159_01907 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D J159_01905 2-keto-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D J159_01908 2-keto-3-deoxy-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D J159_03472 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J159_02766 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J159_02770 Glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:xcu00053] D J159_03738 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J159_01700 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J159_04378 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J159_00667 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J159_04315 L-fucose dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D J159_00273 putative oxidoreductases (related to aryl-alcohol dehydrogenases) K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D J159_04059 Nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01906 Gluconolactonase K13874 araB; L-arabinonolactonase [EC:3.1.1.15] D J159_02711 NAD-dependent aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00500 Starch and sucrose metabolism [PATH:xcu00500] D J159_03472 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J159_02766 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J159_02770 Glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D J159_03652 maltopentaose-forming -amylase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D J159_02452 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J159_04363 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_01937 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_01591 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_03237 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_04020 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_03677 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D J159_00732 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_00464 Cellulase (glycosyl hydrolase family 5) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_00141 Cellulase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_02685 non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_00139 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_00140 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_03242 Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D J159_00545 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D J159_00271 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J159_00546 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J159_00920 Glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1] D J159_00270 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D J159_00548 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D J159_00269 Glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D J159_03417 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D J159_00551 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D J159_00549 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D J159_00547 maltooligosyl trehalose hydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D J159_03371 trehalose 6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D J159_03369 trehalose 6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D J159_00723 Neutral trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D J159_03736 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04063 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_02217 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03231 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03277 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_01933 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J159_01706 Sugar kinase, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:xcu00520] D J159_01474 Beta-glucosidase-related glycosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D J159_03235 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J159_00834 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D J159_01706 Sugar kinase, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J159_03795 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J159_00833 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J159_02877 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D J159_03802 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D J159_04050 putative molecular chaperone distantly related to HSP70-fold metalloprotease K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D J159_02536 2-phosphoglycolate phosphatase, prokaryotic K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D J159_03114 putative phosphotransferase related to Ser/Thr protein kinase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D J159_03115 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D J159_03125 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J159_01948 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J159_00154 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J159_02253 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D J159_01424 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D J159_01414 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D J159_04314 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D J159_04183 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D J159_04362 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D J159_02217 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03231 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03277 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03736 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04063 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_02452 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J159_03738 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J159_01700 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J159_03892 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J159_03894 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J159_04059 Nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D J159_03137 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J159_01933 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J159_03737 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:xcu00620] D J159_04308 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J159_00695 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J159_03818 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_02991 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J159_00770 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00854 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00142 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J159_03504 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J159_01547 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J159_00650 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J159_00648 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J159_02878 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J159_01062 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_00241 NAD-dependent aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D J159_00246 L-lactate dehydrogenase (FMN-dependent) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D J159_00339 pyruvate dehydrogenase (quinone) K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D J159_03789 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D J159_01218 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D J159_02889 Lactate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J159_03630 Malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D J159_01130 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J159_01603 fumarase, class I, homodimeric K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J159_01690 fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J159_00930 Phosphoenolpyruvate carboxylase, type 1 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J159_02188 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J159_00372 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_03615 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:xcu00630] D J159_00373 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D J159_04308 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J159_00372 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D J159_01130 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J159_03548 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D J159_02026 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D J159_02029 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_03648 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J159_02561 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J159_01347 Catalase K03781 katE; catalase [EC:1.11.1.6] D J159_04117 Catalase K03781 katE; catalase [EC:1.11.1.6] D J159_04157 Catalase K03781 katE; catalase [EC:1.11.1.6] D J159_02889 Lactate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J159_03505 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J159_03779 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J159_00688 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J159_02642 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_02644 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00319 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00863 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J159_01350 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J159_03222 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_03221 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D J159_04492 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J159_02214 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D J159_00440 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D J159_01785 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:xcu00640] D J159_04308 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J159_00567 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J159_00566 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J159_00564 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_01547 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J159_00650 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J159_00648 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J159_02878 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J159_02653 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D J159_03397 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J159_03396 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J159_01452 methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J159_01269 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D J159_01270 aconitase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D J159_01273 2-methylaconitate cis-trans isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D J159_02029 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J159_01268 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:xcu00650] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_02160 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_01732 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D J159_00254 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D J159_02195 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D J159_02194 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE D J159_01542 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D J159_03648 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J159_02561 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J159_00483 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D J159_00484 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D J159_02224 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J159_02226 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J159_02222 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J159_02223 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J159_02633 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J159_01995 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J159_03735 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D J159_03734 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D J159_02192 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D J159_03612 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J159_03613 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:xcu00660] D J159_03612 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J159_03613 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D J159_03397 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J159_03396 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J159_04282 4-carboxy-4-hydroxy-2-oxoadipate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D J159_03618 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D J159_03617 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D J159_03616 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:xcu00562] D J159_01147 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J159_03317 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J159_02545 Archaeal fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D J159_02682 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D J159_04260 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J159_00675 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J159_00935 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J159_01452 methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J159_02870 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:xcu00190] D J159_02867 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D J159_02866 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D J159_02865 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D J159_02864 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D J159_02863 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D J159_02862 NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D J159_02861 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D J159_02860 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D J159_02859 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D J159_02858 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D J159_02857 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D J159_02856 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D J159_02855 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D J159_02854 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D J159_03972 NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D J159_02224 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J159_02226 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J159_02222 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J159_02223 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J159_02621 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D J159_02620 Cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D J159_02619 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D J159_04029 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D J159_01400 cytochrome bo3 quinol oxidase subunit 4 K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D J159_04034 Heme/copper-type cytochrome/quinol oxidase, subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D J159_04037 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D J159_04038 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D J159_04035 Cytochrome oxidase assembly factor K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D J159_04030 Uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D J159_01399 cytochrome bo3 quinol oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D J159_01398 cytochrome bo3 quinol oxidase subunit 1 apoprotein K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D J159_01397 cytochrome bo3 quinol oxidase subunit 2 K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D J159_03887 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J159_03143 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J159_02497 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J159_03888 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J159_03142 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J159_02498 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J159_02499 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D J159_01826 Cytochrome c2 K08738 CYC; cytochrome c D J159_03808 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J159_03806 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J159_03807 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J159_03809 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J159_03805 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J159_03812 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J159_03810 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J159_03811 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J159_03601 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D J159_01164 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J159_01064 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:xcu00680] D J159_00766 PQQ-dependent dehydrogenase, methanol/ethanol family K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10] D J159_00855 S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] D J159_00770 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00854 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00856 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D J159_00863 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J159_01861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J159_00930 Phosphoenolpyruvate carboxylase, type 1 K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J159_01130 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J159_03503 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J159_00236 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J159_03597 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D J159_04308 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J159_02188 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J159_03040 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J159_01988 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J159_00133 Lactate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J159_01797 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:xcu00910] D J159_01428 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D J159_02659 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J159_02642 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_02644 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00319 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00144 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J159_00143 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J159_01605 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D J159_01728 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D J159_01752 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D J159_04206 Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:xcu00920] D J159_01140 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J159_01141 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J159_01142 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J159_01143 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J159_00973 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J159_03357 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J159_00953 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D J159_00972 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_03356 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_00951 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_00971 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_03355 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_00952 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_00974 alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D J159_00975 FMN reductase, MsuE subfamily K00299 ssuE; FMN reductase [EC:1.5.1.38] D J159_00450 FMN reductase, MsuE subfamily K00299 ssuE; FMN reductase [EC:1.5.1.38] D J159_03488 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D J159_03489 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J159_03227 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D J159_03492 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D J159_03490 sulfite reductase (NADPH) alpha subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D J159_03108 Sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D J159_04163 Sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D J159_03491 sulfite reductase (NADPH) beta subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D J159_01735 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J159_03500 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D J159_03785 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D J159_02493 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J159_03201 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J159_03200 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J159_02729 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:xcu00061] D J159_01547 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J159_00650 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J159_00648 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J159_02878 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J159_04229 Acyl carrier protein K02078 acpP; acyl carrier protein D J159_01259 acyl carrier protein K02078 acpP; acyl carrier protein D J159_01257 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J159_00685 malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J159_01255 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J159_02109 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J159_02737 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J159_04213 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J159_03782 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J159_01260 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J159_00196 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_04218 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_01258 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_00503 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_02276 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_03781 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D J159_01552 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J159_00254 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D J159_02024 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:xcu00071] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_02159 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_02160 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D J159_03216 Acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D J159_01615 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J159_02024 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J159_00770 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00854 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_02991 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:xcu00561] D J159_04492 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_00142 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D J159_00477 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D J159_04399 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J159_04227 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J159_00961 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:xcu00564] D J159_00337 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D J159_00479 homodimeric glycerol 3-phosphate dehydrogenase (quinone) K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D J159_04399 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J159_04227 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J159_00961 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D J159_01147 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J159_03317 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J159_01606 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D J159_01278 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D J159_04500 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D J159_02524 Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D J159_02525 Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D J159_01558 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D J159_00639 putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D J159_03722 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J159_02193 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J159_02893 phosphatidylserine decarboxylase precursor K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D J159_00632 Phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D J159_02241 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D J159_00602 Phosphoserine phosphatase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D J159_04280 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D J159_04442 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D J159_00125 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D J159_03037 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:xcu00565] D J159_01606 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D J159_01147 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J159_03317 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:xcu00600] D J159_02734 Glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D J159_01309 O-Glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D J159_04380 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_01448 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_00826 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_03235 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism D J159_01606 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D J159_01606 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:xcu00592] D J159_01606 Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D J159_02159 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:xcu01040] D J159_01521 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J159_00294 Fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J159_04086 Fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J159_04087 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D J159_00957 Lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D J159_01382 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:xcu00230] D J159_01034 NTP pyrophosphohydrolase including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D J159_03228 ADP-ribose pyrophosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D J159_03736 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04063 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_01073 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J159_01154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J159_00629 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D J159_03121 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D J159_01375 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D J159_03706 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D J159_03119 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D J159_02841 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D J159_02842 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D J159_00590 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D J159_01687 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J159_00631 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J159_02551 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J159_01744 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J159_01867 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J159_03376 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J159_01475 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D J159_02448 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J159_02162 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J159_03559 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D J159_01321 xanthine dehydrogenase, molybdenum binding subunit apoprotein K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D J159_03060 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like prtein K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D J159_01322 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like prtein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D J159_03061 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like prtein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D J159_01323 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like prtein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D J159_03062 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like prtein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D J159_04346 GMP synthase - Glutamine amidotransferase domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J159_02447 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J159_03555 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D J159_04202 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J159_04201 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J159_03553 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J159_01163 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D J159_03270 (p)ppGpp synthetase, RelA/SpoT family K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D J159_01470 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D J159_01290 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J159_00773 Sugar kinase, ribokinase family K00856 ADK; adenosine kinase [EC:2.7.1.20] D J159_00424 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D J159_02835 putative Rossmann fold nucleotide-binding protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D J159_03596 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J159_03226 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J159_00985 Bis(5'nucleosyl)-tetraphosphatase, ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D J159_03488 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D J159_03489 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J159_00412 putative flavoprotein involved in K+ transport K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D J159_00411 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D J159_00413 OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D J159_00415 putative urate catabolism protein K16842 hpxB; allantoinase [EC:3.5.2.5] D J159_00417 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9] D J159_00416 serine-pyruvate aminotransferase apoenzyme K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D J159_00421 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:xcu00240] D J159_02007 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J159_02005 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J159_03076 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J159_02520 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D J159_01949 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D J159_04054 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D J159_04405 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D J159_01561 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D J159_02162 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J159_03226 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J159_02936 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D J159_01493 putative metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D J159_01858 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D J159_02459 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D J159_01744 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J159_01867 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J159_02684 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D J159_02835 putative Rossmann fold nucleotide-binding protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D J159_00757 Cytosine/adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D J159_02905 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D J159_04202 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J159_04201 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J159_04142 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D J159_04064 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J159_04412 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D J159_00966 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J159_00673 Nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:xcu00250] D J159_01055 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D J159_00364 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D J159_00161 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J159_00169 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J159_01576 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J159_01618 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J159_02482 putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D J159_03656 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J159_02512 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J159_02506 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J159_01290 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J159_01687 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J159_03076 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J159_02633 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J159_00144 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J159_00143 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J159_02659 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J159_04040 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D J159_02642 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_02644 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00319 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_02007 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J159_02005 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J159_03795 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J159_00833 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J159_01154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:xcu00260] D J159_01964 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D J159_03071 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J159_02888 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J159_03199 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J159_01965 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D J159_01967 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D J159_00597 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D J159_00863 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J159_02889 Lactate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J159_04492 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D J159_03040 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J159_01988 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J159_00133 Lactate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J159_01797 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J159_01139 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D J159_01145 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D J159_03585 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J159_01350 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J159_03222 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_03221 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D J159_03722 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J159_02193 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J159_00837 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D J159_00838 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D J159_03761 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D J159_03760 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D J159_03197 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D J159_00498 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J159_03614 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J159_01946 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D J159_02879 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D J159_02881 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:xcu00270] D J159_03500 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D J159_03785 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D J159_03760 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D J159_03761 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D J159_01534 homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D J159_01708 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J159_01709 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J159_00452 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D J159_00936 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J159_00604 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D J159_04075 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D J159_03376 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J159_02538 Cytosine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D J159_01476 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D J159_01780 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D J159_01984 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D J159_01982 acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D J159_01983 acireductone dioxygenase apoprotein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D J159_00237 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J159_03775 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D J159_02364 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J159_00927 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J159_01964 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D J159_03071 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J159_02888 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J159_03199 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J159_02493 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J159_03201 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J159_03200 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J159_01050 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J159_00848 glutamate--cysteine ligase, plant type K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D J159_03261 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D J159_01735 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J159_01946 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D J159_01130 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J159_03197 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D J159_01988 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J159_00133 Lactate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J159_01797 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:xcu00280] D J159_01050 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J159_01491 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D J159_00567 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J159_00566 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J159_00564 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_00381 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_02159 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J159_01456 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D J159_02434 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D J159_01452 methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_02653 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D J159_00379 Acetyl/propionyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D J159_00380 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D J159_01997 Enoyl-CoA hydratase/carnithine racemase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D J159_01995 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J159_03735 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D J159_03734 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:xcu00290] D J159_00498 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J159_03614 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J159_03618 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D J159_03617 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D J159_03616 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D J159_03612 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J159_03613 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D J159_03611 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D J159_00463 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J159_01050 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J159_01491 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D J159_03656 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J159_03615 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:xcu00300] D J159_03199 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J159_01964 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D J159_03071 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J159_02888 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J159_01902 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J159_02004 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D J159_01573 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D J159_03588 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J159_01575 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D J159_00752 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D J159_03338 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D J159_02002 valine-pyruvate aminotransferase apoenzyme K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D J159_00897 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J159_00898 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:xcu00310] D J159_01952 NAD-dependent aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D J159_01682 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01615 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01946 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D J159_02633 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J159_04002 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:xcu00220] D J159_02513 N-acetylornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9] D J159_02512 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J159_02506 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J159_04137 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D J159_04458 urea carboxylase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6] D J159_04459 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D J159_02642 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_02644 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00319 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_02659 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D J159_03656 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J159_02509 N-acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8] D J159_02507 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D J159_03588 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J159_02510 N-acetylcitrulline deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:xcu00330] D J159_00757 Cytosine/adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D J159_04074 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D J159_02464 putative amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D J159_04075 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D J159_00604 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D J159_02641 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_03585 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J159_01126 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J159_02645 gamma-glutamylputrescine oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D J159_04137 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D J159_03086 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D J159_04040 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D J159_02504 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D J159_02503 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D J159_01032 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D J159_00809 2OG-Fe(II) oxygenase superfamily K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D J159_01492 2OG-Fe(II) oxygenase superfamily K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D J159_02384 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] C 00340 Histidine metabolism [PATH:xcu00340] D J159_01972 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D J159_01979 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D J159_01977 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D J159_01976 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D J159_01978 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D J159_01975 imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D J159_01974 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_03582 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_01776 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_01973 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D J159_01786 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D J159_01784 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D J159_01787 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D J159_01788 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D J159_01785 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_03585 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J159_00300 dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:xcu00350] D J159_01974 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_03582 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_01776 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_00237 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J159_00573 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J159_00574 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D J159_03766 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D J159_03767 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D J159_03585 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J159_00770 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00854 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_02991 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J159_03332 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D J159_02633 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D J159_03466 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:xcu00360] D J159_00288 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D J159_03585 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J159_01974 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_03582 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_01776 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_00237 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J159_00573 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J159_02916 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D J159_03845 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D J159_01439 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D J159_01126 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J159_03100 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D J159_00276 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:xcu00380] D J159_00569 Tryptophan 2,3-dioxygenase (vermilion) K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D J159_01748 Kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9] D J159_01749 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D J159_01751 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] D J159_01682 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01615 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_03585 Monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01126 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J159_01347 Catalase K03781 katE; catalase [EC:1.11.1.6] D J159_04117 Catalase K03781 katE; catalase [EC:1.11.1.6] D J159_04157 Catalase K03781 katE; catalase [EC:1.11.1.6] D J159_01439 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:xcu00400] D J159_01124 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J159_00664 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J159_03172 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D J159_04332 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D J159_00651 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D J159_04161 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D J159_03171 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D J159_01799 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D J159_02890 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D J159_00596 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J159_00598 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D J159_00600 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D J159_02883 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D J159_00601 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D J159_02879 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D J159_02881 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J159_03804 chorismate mutase, putative K04093 pheA1; chorismate mutase [EC:5.4.99.5] D J159_01798 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D J159_01672 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D J159_00716 cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D J159_01974 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_03582 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_01776 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_00237 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J159_00288 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D J159_04231 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:xcu00410] D J159_01932 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01931 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J159_02653 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_01452 methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:xcu00430] D J159_02686 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J159_03610 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J159_02659 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:xcu00450] D J159_03200 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D J159_01708 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J159_01709 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J159_00452 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D J159_03760 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D J159_03098 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D J159_01316 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D J159_02150 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D J159_03488 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D J159_03489 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J159_01528 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:xcu00460] D J159_04363 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_01937 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_01591 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_03237 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_04020 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_02686 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J159_03610 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J159_01055 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D J159_00364 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D J159_00863 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:xcu00470] D J159_03844 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J159_00903 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J159_01946 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D J159_04013 L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D J159_00752 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D J159_03338 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D J159_03071 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J159_02384 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D J159_02716 Proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D J159_02713 putative NAD(FAD)-dependent dehydrogenase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-] D J159_02715 Glycine/D-amino acid oxidases (deaminating) K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-] D J159_02714 putative anaerobic dehydrogenase K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma D J159_02712 Dihydrodipicolinate synthase/N-acetylneuraminate lyase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D J159_02711 NAD-dependent aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D J159_02916 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D J159_03845 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:xcu00480] D J159_02686 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J159_03610 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J159_00848 glutamate--cysteine ligase, plant type K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D J159_03261 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D J159_03713 aminopeptidase A. Metallo peptidase. MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J159_04114 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J159_02624 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_04485 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01131 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01437 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01604 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01617 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_02383 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_02554 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_03362 Archaeal flagella assembly protein J K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01018 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_03969 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_02915 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D J159_03985 isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J159_00798 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D J159_02218 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J159_04208 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J159_04479 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J159_01600 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J159_01698 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J159_01281 Peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D J159_04075 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:xcu00511] D J159_04380 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_01448 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_00826 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J159_03235 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J159_03236 beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D J159_01446 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J159_03233 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J159_01917 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] D J159_03252 asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26] D J159_01309 O-Glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis [PATH:xcu00540] D J159_01551 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J159_00907 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D J159_01553 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D J159_01159 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D J159_01550 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D J159_02236 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D J159_03127 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D J159_01859 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D J159_03128 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D J159_02237 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J159_03624 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D J159_03625 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J159_03940 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J159_00501 Aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D J159_00783 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D J159_01356 putative membrane-associated, metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D J159_01226 Lipopolysaccharide kinase (Kdo/WaaP) family K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D J159_03947 Lipid A core - O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:xcu00541] D J159_02452 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J159_03892 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J159_03894 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J159_03738 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J159_01700 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J159_04059 Nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D J159_03741 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J159_03742 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J159_03740 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J159_03739 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D J159_03737 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D J159_03802 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D J159_00154 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J159_02253 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:xcu00550] D J159_03125 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J159_01948 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J159_00902 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J159_03068 UDP-N-acetylmuramoylalanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53] D J159_03069 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23] D J159_00897 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J159_00903 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J159_00898 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J159_01559 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J159_00318 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J159_01161 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J159_00899 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J159_00901 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J159_03209 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J159_03545 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J159_03267 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J159_01279 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D J159_00777 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J159_00896 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J159_00782 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J159_01371 D-Ala-D-Ala carboxypeptidase. Metallo peptidase. MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:xcu00552] D J159_00318 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J159_01161 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J159_00156 bacterial polymer biosynthesis protein, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:xcu00543] D J159_01955 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D J159_01954 poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD D J159_02745 Glycosyltransferase K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] D J159_02742 Glycosyltransferase K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264] D J159_02747 Fucose 4-O-acetylase K13663 gumF; acyltransferase [EC:2.3.1.-] D J159_02749 Undecaprenyl-phosphate glucose phosphotransferase K13656 gumD; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D J159_02740 bacterial polymer biosynthesis protein, WecB/TagA/CpsF family K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-] D J159_02744 Glycosyltransferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251] D J159_02746 Fucose 4-O-acetylase K13664 gumG; acyltransferase [EC:2.3.1.-] D J159_02741 Polysaccharide pyruvyl transferase K13665 gumL; pyruvyltransferase B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:xcu00730] D J159_03606 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D J159_01895 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D J159_02731 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J159_03461 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D J159_03576 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D J159_00873 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D J159_03655 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J159_02924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J159_03596 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:xcu00740] D J159_03942 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J159_00870 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J159_00866 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D J159_04113 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D J159_00871 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D J159_00869 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D J159_01392 FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D J159_04260 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J159_00675 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J159_00935 Histidine phosphatase superfamily (branch 2) K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D J159_04502 Membrane-associated phospholipid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D J159_00975 FMN reductase, MsuE subfamily K00299 ssuE; FMN reductase [EC:1.5.1.38] D J159_00450 FMN reductase, MsuE subfamily K00299 ssuE; FMN reductase [EC:1.5.1.38] D J159_01034 NTP pyrophosphohydrolase including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:xcu00750] D J159_03170 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D J159_01671 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D J159_01797 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J159_00988 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D J159_00123 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D J159_01967 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:xcu00760] D J159_02844 nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D J159_03680 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D J159_01744 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J159_01867 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J159_00791 cytidyltransferase-like domain K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D J159_02943 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D J159_03226 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J159_00621 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D J159_03380 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D J159_01880 competence/damage-inducible protein CinA C-terminal domain K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D J159_00792 Nicotinic acid phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D J159_01743 putative sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D J159_01041 NAD/NADP transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D J159_01046 NAD/NADP transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D J159_01047 NAD/NADP transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D J159_02633 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:xcu00770] D J159_03612 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J159_03613 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D J159_03611 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D J159_00463 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J159_01930 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D J159_04195 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D J159_01931 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J159_04145 transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D J159_04065 Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D J159_03226 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J159_02690 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D J159_03408 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D J159_04296 Phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D J159_01050 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J159_01932 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:xcu00780] D J159_01840 Methylase involved in ubiquinone/menaquinone biosynthesis K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D J159_00502 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D J159_04213 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J159_03782 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J159_01260 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J159_00196 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_04218 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_01258 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_00503 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_02276 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_01552 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J159_00504 carboxylesterase BioH (pimeloyl-CoA synthesis) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D J159_00506 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J159_03229 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D J159_03774 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D J159_00507 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D J159_04146 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:xcu00785] D J159_00785 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D J159_00786 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_00695 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J159_03818 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J159_01683 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D J159_01682 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J159_00567 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D J159_00566 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D J159_00564 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D J159_01350 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D J159_03222 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J159_03221 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:xcu00790] D J159_04434 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D J159_01924 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D J159_02924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J159_04293 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J159_04295 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J159_04021 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D J159_01929 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D J159_00804 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D J159_01876 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D J159_00968 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J159_01151 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D J159_03942 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J159_00870 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J159_01261 aminodeoxychorismate synthase, component I, clade 2 K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D J159_03772 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D J159_02264 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D J159_00288 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D J159_00805 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 PTR1; pteridine reductase [EC:1.5.1.33] D J159_03295 Organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D J159_03293 transcriptional regulator/preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D J159_03997 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D J159_01228 cyclic pyranopterin monophosphate synthase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D J159_01229 cyclic pyranopterin monophosphate synthase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D J159_01231 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D J159_01065 molybdenum cofactor biosynthesis protein B, proteobacterial K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D J159_02169 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D J159_02179 Molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D J159_03055 putative MobA-related protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D J159_02180 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:xcu00670] D J159_00968 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J159_02449 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D J159_00863 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J159_03121 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D J159_00631 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J159_03950 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J159_03222 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J159_01708 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J159_01709 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J159_00966 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J159_00440 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D J159_00447 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D J159_00913 5,10-methylenetetrahydrofolate reductase (NAD(P)) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D J159_03570 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:xcu00860] D J159_03013 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J159_01068 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D J159_04372 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J159_03579 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J159_04167 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D J159_00741 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D J159_00331 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D J159_03174 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D J159_04237 coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D J159_01544 putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D J159_04352 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D J159_00330 putative enzyme of heme biosynthesis K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D J159_03499 uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D J159_02304 Uroporphyrinogen-III methylase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D J159_02306 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D J159_04029 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D J159_04030 Uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D J159_00994 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J159_03349 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J159_03345 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D J159_03348 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D J159_03346 L-threonine O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D J159_03344 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D J159_03341 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D J159_03343 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D J159_03342 Fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D J159_01280 Bacterioferritin (cytochrome b1) K03594 bfr; bacterioferritin [EC:1.16.3.1] D J159_00612 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D J159_01581 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:xcu00130] D J159_04231 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D J159_00509 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D J159_02537 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D J159_00996 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D J159_00761 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D J159_00997 2-octaprenyl-6-methoxyphenol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D J159_00606 Ubiquinone biosynthesis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D J159_00310 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D J159_00201 Putative NADPH-quinone reductase (modulator of drug activity B) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J159_02382 Putative NADPH-quinone reductase (modulator of drug activity B) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J159_01059 NAD(P)H:quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J159_03865 Multimeric flavodoxin WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J159_00455 putative nucleoside-diphosphate-sugar epimerase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J159_00573 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:xcu00900] D J159_02731 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J159_01557 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D J159_01863 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D J159_01071 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D J159_01864 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D J159_01943 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D J159_01395 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_02927 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D J159_03066 Geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D J159_01559 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:xcu00907] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_03590 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K13775 atuG; citronellol/citronellal dehydrogenase D J159_01995 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J159_02159 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D J159_03531 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:xcu00523] D J159_03741 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J159_03742 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J159_03740 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J159_03739 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:xcu01053] D J159_04073 amino acid adenylation domain K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] C 01055 Biosynthesis of vancomycin group antibiotics D J159_03742 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:xcu00946] D J159_04363 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_01937 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_01591 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_03237 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_04020 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids [PATH:xcu00996] D J159_01007 Enoyl-CoA hydratase/carnithine racemase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61] C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:xcu00311] D J159_01580 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D J159_00148 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D J159_03319 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:xcu00332] D J159_02504 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D J159_02503 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:xcu00261] D J159_03488 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D J159_03489 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J159_01964 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D J159_03071 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D J159_02888 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J159_01902 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J159_02004 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:xcu00521] D J159_02217 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03231 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03277 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03736 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_04063 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J159_02545 Archaeal fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D J159_03741 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J159_03742 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J159_03740 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J159_03739 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D J159_02217 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03231 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D J159_03277 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:xcu00525] D J159_03741 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J159_03742 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:xcu00401] D J159_01672 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D J159_01974 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_03582 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_01776 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_00237 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis D J159_04404 2-polyprenyl-6-methoxyphenol hydroxylase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D J159_03155 Tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D J159_04176 Tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D J159_00596 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J159_00598 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D J159_01257 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J159_00685 malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J159_00196 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_04218 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_01258 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_00503 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_02276 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D J159_04229 Acyl carrier protein K02078 acpP; acyl carrier protein D J159_01259 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:xcu00999] D J159_00936 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J159_04161 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D J159_04363 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_01937 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_01591 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_03237 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J159_04020 Beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:xcu00362] D J159_00489 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D J159_02159 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J159_00485 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D J159_00276 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D J159_00487 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D J159_00486 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D J159_00488 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D J159_00490 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D J159_04283 hypothetical protein K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D J159_04284 4-oxalomesaconate hydratase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D J159_04282 4-carboxy-4-hydroxy-2-oxoadipate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D J159_00474 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J159_02160 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D J159_01615 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:xcu00627] D J159_01126 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J159_01062 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D J159_00472 benzaldehyde dehydrogenase (NAD+) K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D J159_00482 vanillate demethylase subunit A K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D J159_00481 vanillate demethylase subunit B K03863 vanB; vanillate monooxygenase ferredoxin subunit C 00364 Fluorobenzoate degradation [PATH:xcu00364] D J159_02901 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:xcu00625] D J159_02991 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J159_00770 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00854 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_04369 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J159_01006 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:xcu00361] D J159_02901 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:xcu00623] D J159_00472 benzaldehyde dehydrogenase (NAD+) K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D J159_02901 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:xcu00622] D J159_00472 benzaldehyde dehydrogenase (NAD+) K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D J159_00276 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation [PATH:xcu00633] D J159_01503 NADH:flavin oxidoreductase, Old Yellow Enzyme family K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D J159_02159 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:xcu00643] D J159_00574 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D J159_03766 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D J159_03767 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D J159_01126 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J159_00483 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D J159_00484 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:xcu00791] D J159_04459 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D J159_04458 urea carboxylase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation [PATH:xcu00930] D J159_04378 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J159_00667 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J159_01458 short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D J159_00276 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation [PATH:xcu00626] D J159_02991 Zn-dependent alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J159_00770 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J159_00854 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D J159_00487 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D J159_00486 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:xcu03020] D J159_01089 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J159_01090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J159_01120 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J159_03554 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:xcu03010] D J159_02458 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D J159_01564 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D J159_01102 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D J159_01119 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D J159_01113 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D J159_01770 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D J159_01092 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D J159_01110 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D J159_00608 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D J159_01095 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D J159_01118 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D J159_01091 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D J159_01117 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D J159_01109 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D J159_02847 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D J159_01430 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D J159_01105 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D J159_01771 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D J159_01100 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D J159_01390 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D J159_04023 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D J159_01085 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D J159_01099 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D J159_01096 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D J159_01097 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D J159_01108 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D J159_01111 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D J159_01087 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D J159_01772 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D J159_01086 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D J159_01084 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D J159_00607 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D J159_01106 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D J159_01115 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D J159_01103 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D J159_01121 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D J159_01112 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D J159_01433 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D J159_02757 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D J159_01387 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D J159_01101 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D J159_01098 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D J159_01107 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D J159_01074 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D J159_01388 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D J159_04286 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D J159_01104 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D J159_01114 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D J159_03549 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D J159_01254 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D J159_04285 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D J159_04507 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D J159_02758 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D J159_02460 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D J159_04047 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J159_04422 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J159_04043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J159_04418 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J159_04042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J159_04417 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:xcu00970] D J159_02578 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_04092 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_02206 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_02208 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_04046 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_04421 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_00511 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_01173 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_01892 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_01893 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_01953 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_02794 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J159_01213 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J159_01214 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J159_02243 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D J159_00609 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J159_01072 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J159_01927 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J159_02205 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J159_02207 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J159_01078 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J159_02242 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J159_02244 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J159_03458 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J159_01174 tRNA-His K14226 tRNA-His; tRNA His D J159_04045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J159_04420 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J159_01590 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_01713 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_02203 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_02252 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_02868 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_01206 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_01203 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J159_03294 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J159_02853 tRNA-Met K14230 tRNA-Met; tRNA Met D J159_00610 tRNA-Met K14230 tRNA-Met; tRNA Met D J159_03936 tRNA-Met K14230 tRNA-Met; tRNA Met D J159_02726 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J159_01172 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J159_02500 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J159_02752 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J159_01223 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J159_01240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J159_01805 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J159_01887 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J159_01079 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J159_01396 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J159_04143 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J159_01081 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J159_01077 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D J159_01212 tRNA-Val K14237 tRNA-Val; tRNA Val D J159_01265 tRNA-Val K14237 tRNA-Val; tRNA Val D J159_02792 tRNA-Val K14237 tRNA-Val; tRNA Val D J159_03013 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J159_00422 amidohydrolase, AtzE family K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D J159_01017 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J159_01885 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J159_03311 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J159_01768 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J159_04343 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J159_04342 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J159_02761 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J159_01802 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J159_02515 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J159_01528 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J159_03950 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J159_03716 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J159_02946 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J159_01393 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J159_02020 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J159_04067 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J159_03724 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J159_01970 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J159_02756 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J159_02755 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J159_04048 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J159_04133 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:xcu03060] D J159_01116 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D J159_01082 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D J159_02869 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D J159_02673 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D J159_02672 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D J159_02674 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D J159_04505 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J159_00910 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J159_00336 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J159_01427 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J159_01232 SRP_RNA K01983 ffs; SRP RNA D J159_02718 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J159_04350 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D J159_04349 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D J159_04348 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D J159_01463 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J159_01394 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:xcu04122] D J159_01735 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J159_02143 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D J159_01231 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D J159_01228 cyclic pyranopterin monophosphate synthase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D J159_01230 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein D J159_01229 cyclic pyranopterin monophosphate synthase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D J159_01065 molybdenum cofactor biosynthesis protein B, proteobacterial K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D J159_03460 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:xcu03018] D J159_00611 NTP pyrophosphohydrolase including oxidative damage repair enzymes K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D J159_02259 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D J159_03979 Superfamily II DNA and RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D J159_01861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J159_02846 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J159_03768 Superfamily II DNA and RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D J159_01714 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J159_02978 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J159_03281 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J159_03981 transcription termination factor Rho K03628 rho; transcription termination factor Rho D J159_01668 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J159_00661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J159_01878 RNA-binding protein Hfq K03666 hfq; host factor-I protein D J159_01164 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J159_01064 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J159_01928 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:xcu03030] D J159_01221 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J159_01548 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J159_01241 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J159_01263 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J159_02944 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J159_03715 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J159_00112 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J159_01620 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J159_04026 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J159_03065 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J159_02362 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J159_01220 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D J159_01549 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J159_04238 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J159_01777 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:xcu03410] D J159_01730 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J159_03975 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J159_02719 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J159_02613 DNA-3-methyladenine glycosylase (3mg) K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D J159_04416 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J159_00725 Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D J159_01370 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J159_02987 DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J159_03079 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D J159_03860 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D J159_04299 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J159_02177 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J159_04053 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J159_04238 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J159_02010 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J159_01777 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:xcu03420] D J159_03024 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J159_01320 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D J159_01386 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D J159_02793 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D J159_02240 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D J159_04278 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J159_04238 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J159_01777 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:xcu03430] D J159_01441 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J159_02565 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D J159_04278 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J159_01747 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D J159_02570 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J159_02926 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J159_02010 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J159_03065 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J159_02362 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J159_01548 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J159_00112 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J159_01241 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J159_02944 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J159_01263 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J159_01221 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J159_03715 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J159_01777 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:xcu03440] D J159_02010 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J159_03065 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J159_02362 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J159_00113 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D J159_01467 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J159_01243 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D J159_01883 RecA protein K03553 recA; recombination protein RecA D J159_04238 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J159_03306 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J159_03303 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J159_03307 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J159_03551 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J159_04469 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D J159_04470 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D J159_04466 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D J159_01548 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J159_00112 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J159_01241 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J159_02944 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J159_01263 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J159_01221 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J159_03715 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J159_03968 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:xcu03450] D J159_00245 Ku protein, prokaryotic K10979 ku; DNA end-binding protein Ku D J159_02575 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:xcu02010] D J159_01140 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J159_01141 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J159_01142 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J159_01143 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J159_00973 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J159_03357 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J159_00953 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D J159_00972 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_03356 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_00951 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_00971 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_03355 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_00952 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_03517 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D J159_03635 ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D J159_03518 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D J159_03519 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D J159_03642 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D J159_02640 Spermidine/putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein D J159_02634 ABC-type spermidine/putrescine transport system, permease component II K11074 potI; putrescine transport system permease protein D J159_02635 ABC-type spermidine/putrescine transport system, permease component I K11075 potH; putrescine transport system permease protein D J159_02636 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D J159_00297 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D J159_00296 ABC-type proline/glycine betaine transport systems, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D J159_02219 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J159_04475 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein D J159_04474 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J159_03729 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J159_04473 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J159_03727 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J159_04476 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D J159_04472 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J159_03728 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J159_01724 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J159_01725 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J159_01723 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D J159_01722 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D J159_01721 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D J159_03824 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D J159_03825 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D J159_03826 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D J159_03759 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D J159_03758 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D J159_04178 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D J159_04179 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D J159_02229 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D J159_02230 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D J159_01819 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D J159_02487 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D J159_01820 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D J159_02486 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D J159_02485 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D J159_02484 heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D J159_03712 putative permease K07091 lptF; lipopolysaccharide export system permease protein D J159_03711 putative permease K11720 lptG; lipopolysaccharide export system permease protein D J159_03131 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D J159_03977 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J159_03978 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J159_02235 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D J159_02353 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D J159_04340 ABC-type bacteriocin/lantibiotic exporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D J159_02961 ABC-type multidrug transport system, ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D J159_02495 thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D J159_02496 thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:xcu02060] D J159_03139 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D J159_03138 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D J159_03137 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J159_02664 Phosphocarrier protein HPr/phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D J159_02666 PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J159_02665 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D J159_03134 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:xcu03070] D J159_03623 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J159_02352 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D J159_02353 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D J159_02950 hypothetical protein K04057 yscP; type III secretion protein P D J159_00535 Type II secretory pathway, component PulD K03219 yscC; type III secretion protein C D J159_00529 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J D J159_00522 type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R D J159_00521 type III secretion protein, HrpO family K03227 yscS; type III secretion protein S D J159_00534 type III secretion protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T D J159_00526 type III secretion protein, YscU/HrpY family K03229 yscU; type III secretion protein U D J159_00525 Type III secretory pathway, component EscV K03230 yscV; type III secretion protein V D J159_00532 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D J159_00523 type III secretion system apparatus protein YscQ/HrcQ K03225 yscQ; type III secretion protein Q D J159_00531 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L D J159_03691 type II secretion system protein D K02453 gspD; general secretion pathway protein D D J159_00813 type II secretion system protein D (GspD) K02453 gspD; general secretion pathway protein D D J159_00812 Type IV pilus biogenesis/PDZ domain K02452 gspC; general secretion pathway protein C D J159_03700 Type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F D J159_00815 type II secretion system protein F K02455 gspF; general secretion pathway protein F D J159_03699 type II secretion system protein G K02456 gspG; general secretion pathway protein G D J159_00816 type II secretion system protein G (GspG) K02456 gspG; general secretion pathway protein G D J159_03698 type II secretion system protein H K02457 gspH; general secretion pathway protein H D J159_00817 type II secretion system protein H (GspH) K02457 gspH; general secretion pathway protein H D J159_03697 prepilin-type N-terminal cleavage/methylation domain K02458 gspI; general secretion pathway protein I D J159_00818 type II secretion system protein I (GspI) K02458 gspI; general secretion pathway protein I D J159_03696 hypothetical protein K02459 gspJ; general secretion pathway protein J D J159_00819 type II secretion system protein J (GspJ) K02459 gspJ; general secretion pathway protein J D J159_03695 Type II secretory pathway, component PulK K02460 gspK; general secretion pathway protein K D J159_00820 type II secretion system protein K (GspK) K02460 gspK; general secretion pathway protein K D J159_03694 Tfp pilus assembly protein PilN K02461 gspL; general secretion pathway protein L D J159_00821 type II secretion system protein L (GspL) K02461 gspL; general secretion pathway protein L D J159_03693 Type II secretion system (T2SS), protein M subtype b K02462 gspM; general secretion pathway protein M D J159_00822 type II secretion system protein M (GspM) K02462 gspM; general secretion pathway protein M D J159_04344 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J159_03701 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J159_00814 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J159_02673 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D J159_02672 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D J159_01082 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D J159_02869 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D J159_01116 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D J159_02674 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D J159_04505 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J159_00910 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J159_02718 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J159_00336 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J159_01427 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J159_04350 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D J159_04349 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D J159_04348 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D J159_00078 Transglycosylase SLT domain K03194 virB1; type IV secretion system protein VirB1 D J159_02784 Transglycosylase SLT domain K03194 virB1; type IV secretion system protein VirB1 D J159_00089 TrbC/VIRB2 family K03197 virB2; type IV secretion system protein VirB2 D J159_02783 TrbC/VIRB2 family K03197 virB2; type IV secretion system protein VirB2 D J159_02782 Type IV secretory pathway, VirB3 component K03198 virB3; type IV secretion system protein VirB3 D J159_00086 Type IV secretion system protein K03200 virB5; type IV secretion system protein VirB5 D J159_02780 hypothetical protein K03200 virB5; type IV secretion system protein VirB5 D J159_00081 P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D J159_02787 Type IV secretory pathway, VirB9 component K03204 virB9; type IV secretion system protein VirB9 D J159_00083 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J159_02775 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J159_02779 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J159_00082 Type IV secretory pathway, component VirB8 K03203 virB8; type IV secretion system protein VirB8 D J159_02788 Type IV secretory pathway, component VirB8 K03203 virB8; type IV secretion system protein VirB8 D J159_02786 Type IV secretory pathway, VirB10 component K03195 virB10; type IV secretion system protein VirB10 D J159_00080 Type IV secretory pathway, VirB10 component K03195 virB10; type IV secretion system protein VirB10 D J159_00087 Type IV secretory pathway, VirB4 component K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D J159_02781 type IV secretion/conjugal transfer ATPase, VirB4 family K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D J159_00079 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D J159_02785 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D J159_02790 Type IV secretory pathway, VirD4 component K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D J159_04252 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D J159_04272 Hemolysin-coregulated protein (uncharacterized) K11903 hcp; type VI secretion system secreted protein Hcp D J159_04247 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D J159_04248 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK D J159_04267 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:xcu02020] D J159_01165 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J159_01166 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D J159_02924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J159_04293 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J159_04295 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J159_01724 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J159_01725 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J159_04151 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J159_04152 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D J159_04502 Membrane-associated phospholipid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D J159_01461 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D J159_03020 Signal transduction histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D J159_03021 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D J159_00442 Signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J159_00441 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07664 baeR; two-component system, OmpR family, response regulator BaeR D J159_03999 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D J159_04000 Cation/multidrug efflux pump K07788 mdtB; multidrug efflux pump D J159_04001 Cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump D J159_00443 RND family efflux transporter, MFP subunit K18321 smeA; membrane fusion protein, multidrug efflux system D J159_00444 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18322 smeB; multidrug efflux pump D J159_00445 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18323 smeC; outer membrane protein, multidrug efflux system D J159_02120 Flagellin K02406 fliC; flagellin D J159_02078 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D J159_02053 Flagellar motor component K02556 motA; chemotaxis protein MotA D J159_03850 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J159_00880 Osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D J159_00881 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D J159_00877 K+-transporting ATPase, KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D J159_00878 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D J159_00879 K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D J159_03643 Signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D J159_03644 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07774 tctD; two-component system, OmpR family, response regulator TctD D J159_04030 Uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D J159_00111 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J159_01511 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D J159_04010 D-Ala-D-Ala dipeptidase vanX. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J159_01371 D-Ala-D-Ala carboxypeptidase. Metallo peptidase. MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J159_03778 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D J159_00739 putative signal transduction protein with a C-terminal ATPase domain K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J159_00740 two component transcriptional regulator, LytTR family K08083 algR; two-component system, LytTR family, response regulator AlgR D J159_04179 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D J159_04178 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D J159_02258 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D J159_03148 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D J159_01886 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D J159_03219 Beta-lactamase class C and other penicillin binding protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D J159_04121 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J159_04120 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07693 desR; two-component system, NarL family, response regulator DesR D J159_01567 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J159_01570 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J159_01565 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J159_01569 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J159_01568 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein D J159_01572 UTP--GlnB (protein PII) uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D J159_00320 nitrogen regulatory protein P-II family K04751 glnB; nitrogen regulatory protein P-II 1 D J159_04080 nitrogen regulatory protein P-II family K04751 glnB; nitrogen regulatory protein P-II 1 D J159_00322 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J159_00323 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D J159_02642 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_02644 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00319 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_03631 Na+/H+-dicarboxylate symporters K11103 dctA; aerobic C4-dicarboxylate transport protein D J159_03398 Signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J159_03399 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D J159_02114 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J159_03132 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J159_03405 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J159_03404 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J159_03955 Tfp pilus assembly protein, major pilin PilA K02650 pilA; type IV pilus assembly protein PilA D J159_02034 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J159_03035 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J159_03882 Methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D J159_02038 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_00731 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_03920 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02041 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_01807 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02039 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03288 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03609 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02612 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_01888 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02036 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02043 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02044 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02141 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03032 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02316 HAMP domain K03406 mcp; methyl-accepting chemotaxis protein D J159_03373 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02035 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02046 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02037 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02050 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_02611 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_03033 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_02047 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02075 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_03031 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02048 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_02077 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_03436 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_02032 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_01419 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_03036 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_02132 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D J159_03257 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J159_03258 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D J159_03256 Chemotaxis protein histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D J159_03260 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG D J159_01285 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J159_03259 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J159_03255 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D J159_03254 Chemotaxis signal transduction protein K06598 chpC; chemosensory pili system protein ChpC D J159_01811 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13589 cpdR; two-component system, cell cycle response regulator CpdR D J159_02112 transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D J159_02022 Signal transduction histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D J159_02021 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K13815 rpfG; two-component system, response regulator RpfG D J159_00603 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J159_02023 Enoyl-CoA hydratase/carnithine racemase K13816 rpfF; DSF synthase D J159_01942 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D J159_01941 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 regA; two-component system, response regulator RegA D J159_02621 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D J159_02620 Cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D J159_02619 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D J159_01826 Cytochrome c2 K08738 CYC; cytochrome c D J159_03887 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J159_03143 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J159_02497 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J159_03888 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J159_03142 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J159_02498 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J159_02499 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D J159_03623 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J159_02751 Periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein D J159_02238 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D J159_00154 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J159_00732 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_00464 Cellulase (glycosyl hydrolase family 5) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_00141 Cellulase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_02685 non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_00139 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_00140 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D J159_04258 FecR family protein K07165 fecR; transmembrane sensor D J159_02342 FecR family protein K07165 fecR; transmembrane sensor D J159_02134 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:xcu04148] D J159_04137 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D J159_02621 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:xcu02024] D J159_01878 RNA-binding protein Hfq K03666 hfq; host factor-I protein D J159_00596 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J159_00598 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D J159_01124 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J159_00664 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J159_00881 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D J159_03148 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D J159_03719 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J159_03146 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J159_02532 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D J159_02023 Enoyl-CoA hydratase/carnithine racemase K13816 rpfF; DSF synthase D J159_00585 griselysin. Metallo peptidase. MEROPS family M04 K20273 zmpA; zinc metalloprotease ZmpA D J159_02024 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J159_02022 Signal transduction histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D J159_02021 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K13815 rpfG; two-component system, response regulator RpfG D J159_00603 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J159_03012 zinc uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D J159_03684 hypothetical protein K20326 xagA; protein XagA D J159_03683 Glycosyltransferase K20327 xagB; glycosyltransferase XagB D J159_03682 hypothetical protein K20328 xagC; membrane protein XagC D J159_01940 Cellulase (glycosyl hydrolase family 5) K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J159_03942 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J159_00866 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D J159_03008 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D J159_00980 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D J159_00981 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D J159_00982 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D J159_00984 ATPase component of various ABC-type transport systems, containing duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D J159_04505 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J159_03702 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_03704 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01051 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01052 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01053 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01082 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D J159_02869 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D J159_01116 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D J159_02674 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D J159_00910 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J159_02718 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J159_00336 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J159_01427 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J159_01147 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J159_03317 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:xcu02030] D J159_02038 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_00731 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_03920 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02041 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_01807 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02039 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03288 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03609 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02612 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_01888 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02036 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02043 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02044 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02141 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03032 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02316 HAMP domain K03406 mcp; methyl-accepting chemotaxis protein D J159_03373 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02035 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02046 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02037 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02047 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02075 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_03031 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02050 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_02611 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_03033 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_02048 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_02077 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_03436 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_02076 Chemotaxis protein K03414 cheZ; chemotaxis protein CheZ D J159_02032 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_01419 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_03036 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_03882 Methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D J159_02132 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D J159_02033 Chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D J159_02034 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J159_03035 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J159_02098 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D J159_02092 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D J159_02091 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D J159_02053 Flagellar motor component K02556 motA; chemotaxis protein MotA D J159_03850 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J159_02052 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J159_03851 Flagellar motor protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:xcu02040] D J159_02100 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D J159_02099 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF D J159_02098 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D J159_02097 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D J159_02096 ATPase FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D J159_02095 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D J159_02094 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D J159_02093 Flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D J159_02092 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D J159_02091 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D J159_02090 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D J159_02089 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D J159_02087 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D J159_02086 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D J159_02081 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D J159_02082 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D J159_02133 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D J159_02131 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D J159_02130 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D J159_02129 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D J159_02128 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D J159_02127 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D J159_02126 flagellar basal-body rod protein FlgG, Gram-negative bacteria K02392 flgG; flagellar basal-body rod protein FlgG D J159_02125 Flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D J159_02124 Flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D J159_02123 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D J159_02122 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D J159_02121 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D J159_02120 Flagellin K02406 fliC; flagellin D J159_02119 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D J159_02118 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS D J159_02053 Flagellar motor component K02556 motA; chemotaxis protein MotA D J159_03850 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J159_02052 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J159_03851 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J159_02134 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM D J159_03938 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D J159_02112 transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D J159_02114 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J159_03132 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J159_02078 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D J159_01861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:xcu04980] D J159_00994 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J159_01708 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J159_01709 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:xcu01501] D J159_04052 Na+/melibiose symporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J159_01474 Beta-glucosidase-related glycosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D J159_03320 Transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D J159_03219 Beta-lactamase class C and other penicillin binding protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D J159_03521 TonB family C-terminal domain K02172 blaR1; bla regulator protein blaR1 D J159_00181 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D J159_03522 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J159_03319 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] D J159_02661 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03487 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03010 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_02211 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_02662 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J159_03486 Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D J159_03008 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D J159_03623 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J159_03545 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J159_00777 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J159_00896 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:xcu01502] D J159_04010 D-Ala-D-Ala dipeptidase vanX. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J159_00903 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J159_03844 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J159_00898 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J159_00899 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J159_00901 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J159_01371 D-Ala-D-Ala carboxypeptidase. Metallo peptidase. MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:xcu01503] D J159_04151 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J159_04152 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D J159_01356 putative membrane-associated, metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D J159_01923 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J159_02566 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J159_01461 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D J159_00841 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J159_00842 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J159_02661 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03487 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03010 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_02211 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_02662 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J159_03486 Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D J159_03623 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J159_01551 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J159_01511 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:xcu01000] C 01001 Protein kinases [BR:xcu01001] D J159_00493 Serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D J159_04255 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J159_00253 transcriptional regulator K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J159_00301 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J159_01410 Anti-sigma regulatory factor (Ser/Thr protein kinase) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D J159_01165 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J159_04151 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J159_03020 Signal transduction histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D J159_00442 Signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J159_00880 Osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D J159_03643 Signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D J159_00849 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J159_04121 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J159_00739 putative signal transduction protein with a C-terminal ATPase domain K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J159_00322 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J159_03398 Signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J159_02047 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02075 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_03031 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_03256 Chemotaxis protein histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D J159_02022 Signal transduction histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D J159_01942 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:xcu01009] D J159_00927 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J159_02692 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_01406 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_01222 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:xcu01002] D J159_01394 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D J159_03407 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J159_04346 GMP synthase - Glutamine amidotransferase domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J159_02447 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J159_02643 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase D J159_04340 ABC-type bacteriocin/lantibiotic exporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D J159_02920 Cell wall-associated hydrolases (invasion-associated proteins) K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D J159_01154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J159_00144 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J159_03795 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J159_00833 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J159_00161 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J159_00169 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J159_01576 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J159_01618 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D J159_03092 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D J159_03452 CAAX protease self-immunity K07052 K07052; CAAX protease family protein D J159_00116 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein D J159_01355 Oligoendopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D J159_03784 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D J159_00365 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D J159_01599 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D J159_00585 griselysin. Metallo peptidase. MEROPS family M04 K20273 zmpA; zinc metalloprotease ZmpA D J159_02910 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J159_02911 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J159_02912 putative metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J159_03038 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J159_03868 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J159_01371 D-Ala-D-Ala carboxypeptidase. Metallo peptidase. MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J159_04010 D-Ala-D-Ala dipeptidase vanX. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J159_00729 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D J159_03713 aminopeptidase A. Metallo peptidase. MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J159_04114 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J159_04494 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J159_03144 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J159_01575 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D J159_00417 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9] D J159_03088 metalloendopeptidase-like membrane protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J159_03527 metalloendopeptidase-like membrane protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J159_03933 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J159_01571 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J159_02710 Xaa-Pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D J159_03563 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D J159_03565 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D J159_03769 putative aminopeptidase K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21] D J159_02928 Deuterolysin metalloprotease (M35) family K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20] D J159_01875 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J159_02559 Heat shock protein. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D J159_01167 Putative Zn-dependent protease, contains TPR repeats K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D J159_01556 site-2 protease. Metallo peptidase. MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D J159_03521 TonB family C-terminal domain K02172 blaR1; bla regulator protein blaR1 D J159_00181 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D J159_01157 peptidyl-Asp metalloendopeptidase K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33] D J159_04148 hypothetical protein K09933 mtfA; MtfA peptidase D J159_01461 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D J159_04108 periplasmic serine protease, Do/DeqQ family K04772 degQ; serine protease DegQ [EC:3.4.21.-] D J159_03152 arginyl peptidase. Serine peptidase. MEROPS family S01A K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D J159_03702 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_03704 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01051 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01052 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01053 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_00746 Serine proteases of the peptidase family S9A K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D J159_04171 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J159_00749 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D J159_00782 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J159_01208 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D J159_01210 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D J159_01882 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J159_01330 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J159_01463 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J159_01032 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D J159_00787 C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J159_00134 C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J159_01580 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D J159_00148 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D J159_03963 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-] D J159_02701 putative protease K08677 kscP; kumamolisin [EC:3.4.21.123] D J159_02913 putative membrane protein K07059 K07059; rhomboid family protein D J159_00755 HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D J159_00364 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D J159_02686 gamma-glutamyltransferase 1 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J159_03610 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D J159_00421 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D J159_02930 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 K03592 pmbA; PmbA protein D J159_00233 putative Zn-dependent proteases and their inactivated-like prtein K03568 tldD; TldD protein D J159_00234 putative Zn-dependent proteases and their inactivated-like prtein K03568 tldD; TldD protein D J159_02932 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 K03568 tldD; TldD protein D J159_01276 Large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin D J159_01288 Membrane protease subunits, stomatin/prohibitin-like prtein K04087 hflC; modulator of FtsH protease HflC D J159_01287 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:xcu01003] D J159_02734 Glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D J159_00545 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D J159_03677 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D J159_03209 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J159_01279 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D J159_03267 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J159_03545 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J159_00156 bacterial polymer biosynthesis protein, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D J159_00737 Membrane glycosyltransferase K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D J159_03683 Glycosyltransferase K20327 xagB; glycosyltransferase XagB D J159_02749 Undecaprenyl-phosphate glucose phosphotransferase K13656 gumD; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D J159_02740 bacterial polymer biosynthesis protein, WecB/TagA/CpsF family K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-] D J159_02745 Glycosyltransferase K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] D J159_02742 Glycosyltransferase K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264] D J159_02744 Glycosyltransferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251] D J159_01955 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D J159_03371 trehalose 6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:xcu01005] D J159_01551 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J159_01550 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D J159_00907 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D J159_01553 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D J159_01159 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D J159_02236 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D J159_03625 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J159_03940 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J159_00501 Aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D J159_00783 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D J159_03624 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D J159_01356 putative membrane-associated, metal-dependent hydrolase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D J159_01226 Lipopolysaccharide kinase (Kdo/WaaP) family K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D J159_01859 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D J159_02237 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J159_03128 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D J159_03127 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D J159_03947 Lipid A core - O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D J159_01225 ADP-heptose:LPS heptosyltransferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D J159_03208 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:xcu01011] D J159_03125 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J159_01948 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J159_00902 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J159_00897 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J159_00903 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J159_03844 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J159_00899 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J159_00901 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J159_00318 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J159_01161 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J159_01391 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D J159_03545 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J159_03267 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J159_01279 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D J159_00777 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J159_00896 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J159_00782 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J159_03209 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J159_04010 D-Ala-D-Ala dipeptidase vanX. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J159_01371 D-Ala-D-Ala carboxypeptidase. Metallo peptidase. MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J159_02920 Cell wall-associated hydrolases (invasion-associated proteins) K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D J159_03088 metalloendopeptidase-like membrane protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J159_03527 metalloendopeptidase-like membrane protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J159_03718 Soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D J159_00780 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D J159_00049 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D J159_03386 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D J159_01217 Transglycosylase SLT domain/LysM domain K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D J159_02894 Soluble lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D J159_01262 conserved hypothetical protein, YceG family K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D J159_00781 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D J159_01923 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J159_02566 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:xcu01004] D J159_01257 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J159_00685 malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J159_01255 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J159_02109 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J159_02737 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J159_04213 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J159_03782 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J159_01260 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J159_00196 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_04218 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_01258 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_00503 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_02276 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J159_03781 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D J159_01552 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J159_00254 putative paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D J159_00957 Lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D J159_01382 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D J159_01521 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J159_00294 Fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J159_04086 Fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J159_04308 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J159_02024 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J159_01005 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D J159_04399 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J159_04227 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:xcu01008] D J159_04073 amino acid adenylation domain K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] C 01006 Prenyltransferases [BR:xcu01006] D J159_02927 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D J159_03066 Geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D J159_01559 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J159_01877 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J159_00509 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D J159_04029 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:xcu01007] D J159_03013 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J159_01017 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J159_02560 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D J159_04048 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J159_04133 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J159_02515 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J159_04067 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J159_01528 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J159_01393 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J159_03716 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J159_02946 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J159_02020 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J159_03311 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J159_01768 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J159_01970 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J159_04343 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J159_04342 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J159_01802 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J159_03724 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J159_02761 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J159_01885 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J159_02756 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J159_02755 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J159_03656 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J159_00237 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D J159_02483 Aspartate/tyrosine/aromatic aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D J159_01974 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_03582 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_01776 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J159_01139 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D J159_00506 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J159_02653 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D J159_03588 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J159_02641 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D J159_03229 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D J159_04372 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J159_03579 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J159_01050 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J159_01797 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J159_00416 serine-pyruvate aminotransferase apoenzyme K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:xcu00194] D J159_03805 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J159_03806 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J159_03807 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J159_03808 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J159_03809 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J159_03810 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J159_03811 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J159_03812 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:xcu03000] D J159_02364 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J159_00473 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D J159_02388 transcriptional regulator, AraC family K25495 nimR; AraC family transcriptional regulator, regulator of nimT D J159_03604 transcriptional regulator K07506 K07506; AraC family transcriptional regulator D J159_02313 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D J159_02987 DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J159_04189 transcriptional regulator, AraC family with amidase-like domain K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D J159_02956 Transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D J159_01004 transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D J159_00449 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D J159_02318 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D J159_01028 Transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D J159_01677 Transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D J159_03290 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D J159_04281 Transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D J159_03320 Transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D J159_01624 Transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D J159_02882 transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator D J159_00480 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D J159_04358 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J159_04401 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J159_03469 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J159_00281 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J159_00832 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J159_02474 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J159_01704 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J159_02663 transcriptional regulator, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D J159_01789 histidine utilization repressor, proteobacterial K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D J159_00830 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D J159_01001 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D J159_00367 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D J159_03621 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D J159_01294 transcriptional regulator, TetR family K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA D J159_04088 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D J159_00289 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J159_03846 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J159_03148 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D J159_04435 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D J159_01809 Transcriptional regulators K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D J159_01598 Transcriptional regulators K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D J159_00397 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D J159_03160 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D J159_01664 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D J159_03012 zinc uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D J159_00492 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D J159_00603 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J159_01969 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D J159_01451 transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D J159_01540 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D J159_02184 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D J159_03522 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J159_04146 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D J159_00640 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J159_01267 propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D J159_00302 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D J159_02112 transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D J159_00772 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D J159_04491 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator D J159_04181 transcriptional regulator K07729 K07729; putative transcriptional regulator D J159_04040 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D J159_00853 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D J159_02475 transcriptional regulator, BolA protein family K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D J159_00096 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J159_04057 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J159_01666 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D J159_01901 Glycine cleavage system regulatory protein K03567 gcvR; glycine cleavage system transcriptional repressor D J159_01027 Transcription elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase D J159_02327 transcriptional regulator, AlpA family K07733 alpA; prophage regulatory protein D J159_02354 transcriptional regulator, AlpA family K07733 alpA; prophage regulatory protein D J159_02445 transcriptional regulator, AlpA family K07733 alpA; prophage regulatory protein D J159_01764 negative transcriptional regulator, PaiB family K07734 paiB; transcriptional regulator D J159_03078 Putative transcriptional regulator K07735 algH; putative transcriptional regulator D J159_02518 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D J159_00864 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D J159_00893 mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:xcu03021] D J159_01120 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J159_01089 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J159_01090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J159_03554 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D J159_03938 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D J159_02979 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J159_01523 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J159_01823 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J159_04116 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J159_01459 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J159_03974 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor D J159_02114 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J159_03132 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D J159_02078 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D J159_02851 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D J159_00872 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D J159_01083 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D J159_02618 Glutathione S-transferase K03599 sspA; stringent starvation protein A D J159_02617 Stringent starvation protein B K03600 sspB; stringent starvation protein B D J159_01410 Anti-sigma regulatory factor (Ser/Thr protein kinase) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D J159_01409 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17762 rsbS; rsbT antagonist protein RsbS D J159_01408 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17763 rsbR; rsbT co-antagonist protein RsbR D J159_00691 HAMP domain/Cache domain/Stage II sporulation protein E (SpoIIE) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D J159_02518 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D J159_02008 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D J159_02899 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D J159_03981 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:xcu03019] D J159_02259 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D J159_02935 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D J159_01465 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J159_01714 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J159_02547 Guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D J159_02186 Oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-] D J159_03979 Superfamily II DNA and RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D J159_03768 Superfamily II DNA and RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D J159_02978 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J159_03281 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J159_01861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J159_02846 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J159_03981 transcription termination factor Rho K03628 rho; transcription termination factor Rho D J159_01668 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J159_00661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J159_01878 RNA-binding protein Hfq K03666 hfq; host factor-I protein D J159_01164 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J159_01064 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D J159_01928 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D J159_00611 NTP pyrophosphohydrolase including oxidative damage repair enzymes K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D J159_01886 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D J159_02972 RraA famliy K02553 rraA; regulator of ribonuclease activity A D J159_03136 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ D J159_03279 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D J159_00409 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:xcu03011] D J159_02458 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D J159_01564 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D J159_01102 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D J159_01119 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D J159_01113 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D J159_01770 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D J159_01092 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D J159_01110 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D J159_00608 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D J159_01095 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D J159_01118 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D J159_01091 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D J159_01117 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D J159_01109 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D J159_02847 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D J159_01430 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D J159_01105 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D J159_01771 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D J159_01100 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D J159_01390 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D J159_04023 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D J159_02992 SSU ribosomal protein S31P K19033 PSRP4; 30S ribosomal protein S31 D J159_01085 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D J159_01099 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D J159_01096 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D J159_01097 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D J159_01108 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D J159_01111 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D J159_01772 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D J159_01086 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D J159_01084 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D J159_01087 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D J159_00607 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D J159_01106 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D J159_01115 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D J159_01103 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D J159_01121 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D J159_01112 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D J159_01433 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D J159_02757 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D J159_01387 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D J159_01101 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D J159_01098 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D J159_01107 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D J159_01388 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D J159_04286 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D J159_01104 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D J159_01114 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D J159_03549 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D J159_01254 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D J159_04285 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D J159_04507 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D J159_02758 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D J159_02460 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D J159_01074 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D J159_04042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J159_04417 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J159_04047 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J159_04422 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J159_04043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J159_04418 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:xcu03009] D J159_01465 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J159_00493 Serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D J159_02186 Oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-] D J159_01466 GTP-binding protein Era K03595 era; GTPase D J159_01389 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D J159_02518 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D J159_02851 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D J159_00872 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D J159_01083 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D J159_03835 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D J159_00987 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D J159_03949 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D J159_03836 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D J159_02691 16S rRNA m(2)G-966 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D J159_03230 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D J159_04292 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J159_00894 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D J159_00888 putative S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D J159_01716 23S rRNA Gm-2251 2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D J159_01874 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D J159_02940 rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D J159_04496 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D J159_03022 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D J159_01742 23S rRNA m(2)G-2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D J159_01013 putative SAM-dependent methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D J159_02163 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D J159_01469 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D J159_04452 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J159_01137 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D J159_02479 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D J159_02260 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D J159_03377 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D J159_00406 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D J159_02976 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D J159_03286 16S rRNA uridine-516 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D J159_03475 rRNA methylase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D J159_03720 [SSU ribosomal protein S18P]-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D J159_03253 [SSU ribosomal protein S5P]-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D J159_03416 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D J159_01431 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D J159_02900 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D J159_00645 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D J159_02891 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D J159_01685 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D J159_02259 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D J159_02935 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D J159_03077 RNAse H-fold protein YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D J159_02550 Superfamily II DNA and RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D J159_02978 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J159_03655 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J159_02168 ribosome-associated GTPase EngA K03977 engA; GTPase D J159_01879 GTP-binding protein HflX K03665 hflX; GTPase D J159_03958 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J159_03553 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J159_02849 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D J159_02852 hypothetical protein K09748 rimP; ribosome maturation factor RimP D J159_02981 hypothetical protein K14761 rlbA; ribosome-associated protein D J159_02942 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein D J159_02628 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor D J159_01873 putative RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein D J159_02931 hypothetical protein K09889 yjgA; ribosome-associated protein D J159_03133 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor D J159_01076 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D J159_01253 putative metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:xcu03016] D J159_02547 Guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D J159_00836 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D J159_04094 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D J159_03013 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J159_03724 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J159_01393 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J159_02946 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J159_01528 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J159_01017 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J159_04067 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J159_02020 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J159_03311 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J159_01885 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J159_01768 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J159_02761 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J159_01802 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J159_02515 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J159_03716 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J159_01970 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J159_02756 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J159_02755 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J159_04048 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J159_04133 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J159_03939 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D J159_01244 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J159_03462 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D J159_02884 tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D J159_02848 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D J159_01865 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D J159_03958 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J159_01877 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J159_04503 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D J159_00496 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D J159_03227 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D J159_04506 ribonuclease P protein component, eubacterial K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D J159_00889 RNase_P_RNA K01978 rnpB; M1 RNA D J159_01718 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-] D J159_03557 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D J159_02573 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D J159_01507 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D J159_00861 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA D J159_04343 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J159_04342 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J159_02560 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D J159_01054 transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D J159_02185 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D J159_04154 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D J159_00939 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D J159_02625 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D J159_01432 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D J159_03475 rRNA methylase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D J159_02544 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D J159_00345 putative rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D J159_00360 Pseudouridylate synthase, 23S RNA-specific K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D J159_04452 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J159_02143 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D J159_04356 putative ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D J159_01769 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D J159_02220 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D J159_02676 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D J159_03293 transcriptional regulator/preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D J159_03772 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D J159_03295 Organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D J159_03997 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D J159_02569 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D J159_00448 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D J159_02675 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D J159_02925 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D J159_03264 tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D J159_04022 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D J159_02567 tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D J159_01611 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D J159_01714 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J159_02846 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J159_00101 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:xcu03012] D J159_02850 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D J159_02760 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D J159_03322 ATPase component of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D J159_01563 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D J159_01080 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J159_01094 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J159_01093 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D J159_01067 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D J159_01560 ribosome recycling factor K02838 frr; ribosome recycling factor D J159_01031 [protein release factor]-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D J159_01075 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D J159_02147 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D J159_01993 translation elongation factor P (EF-P) K02356 efp; elongation factor P D J159_02540 translation elongation factor P K02356 efp; elongation factor P D J159_01778 EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D J159_02541 L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D J159_02019 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 D J159_03204 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3 D J159_00362 Protein chain release factor B K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:xcu03110] D J159_02146 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D J159_03354 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D J159_01209 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D J159_00756 ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D J159_02692 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_01406 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_01668 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J159_01499 hypothetical protein K04046 yegD; hypothetical chaperone protein D J159_00661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J159_01669 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D J159_01283 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein D J159_03210 Disulfide bond chaperones of the HSP33 family K04083 hslO; molecular chaperone Hsp33 D J159_01667 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D J159_01282 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D J159_01438 heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D J159_00660 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES D J159_01461 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D J159_01875 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J159_03812 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J159_01565 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J159_01569 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J159_00336 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J159_01384 hypothetical protein K09796 pccA; periplasmic copper chaperone A D J159_03702 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_03704 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01051 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01052 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_01053 Subtilisin-like serine protease K14645 K14645; serine protease [EC:3.4.21.-] D J159_03235 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J159_01129 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D J159_01215 Parvulin-like peptidyl-prolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D J159_02255 FKBP-type peptidyl-prolyl cis-trans isomerases 1 K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D J159_01699 FKBP-type peptidyl-prolyl cis-trans isomerases 1 K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D J159_02918 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D J159_01500 FKBP-type peptidyl prolyl cis-trans isomerase/Apo-metallochaperone SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D J159_00989 periplasmic chaperone for outer membrane proteins SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D J159_00221 Thioredoxin K03671 TXN; thioredoxin D J159_03980 thioredoxin K03671 TXN; thioredoxin D J159_04199 Thioredoxin K03671 TXN; thioredoxin D J159_01416 Thioredoxin domain-containing protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D J159_02948 thioredoxin K05838 ybbN; putative thioredoxin D J159_01168 Glutaredoxin, GrxC family K03676 grxC; glutaredoxin 3 D J159_02839 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D J159_03661 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D J159_00841 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J159_00842 Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J159_01122 Thiol:disulfide interchange protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D J159_03707 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D J159_01816 periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D J159_02490 periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:xcu04131] D J159_02162 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J159_03503 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J159_03511 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J159_03040 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J159_03504 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J159_02692 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_01406 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:xcu03051] D J159_02692 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_01406 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:xcu03032] D J159_01220 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D J159_02364 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J159_01211 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D J159_02754 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D J159_02457 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D J159_00111 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J159_01620 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J159_04026 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J159_03065 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J159_02362 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J159_01548 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J159_00112 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J159_03715 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J159_02944 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J159_01263 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J159_01221 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J159_01241 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J159_01549 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J159_04238 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J159_01777 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J159_03116 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein D J159_01781 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J159_00115 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J159_01584 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J159_01856 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J159_03957 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J159_00146 Topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J159_02363 DNA topoisomerase III, bacteria and conjugative plasmid K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:xcu03036] D J159_02364 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J159_01465 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J159_03503 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J159_03725 nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS D J159_01211 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D J159_02754 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D J159_02457 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D J159_01283 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein D J159_00111 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J159_03280 DNA-binding ferritin-like protein (oxidative damage protectant) K04047 dps; starvation-inducible DNA-binding protein D J159_00640 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J159_01878 RNA-binding protein Hfq K03666 hfq; host factor-I protein D J159_03290 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D J159_00289 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J159_03846 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J159_01773 condensin subunit Smc K03529 smc; chromosome segregation protein D J159_02477 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D J159_02478 condensin subunit ScpB K06024 scpB; segregation and condensation protein B D J159_00905 cell division protein FtsA K03590 ftsA; cell division protein FtsA D J159_01862 cell division protein FtsB K05589 ftsB; cell division protein FtsB D J159_03978 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J159_00896 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J159_02151 DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D J159_00895 cell division protein FtsL K03586 ftsL; cell division protein FtsL D J159_00904 Cell division septal protein K03589 ftsQ; cell division protein FtsQ D J159_00900 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D J159_03977 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J159_00906 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J159_01774 cell division protein ZipA K03528 zipA; cell division protein ZipA D J159_03568 cell division protein ZapA K09888 zapA; cell division protein ZapA D J159_03567 TIGR02449 family protein K09892 zapB; cell division protein ZapB D J159_00396 putative ATPase K06916 zapE; cell division protein ZapE D J159_01923 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J159_02566 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J159_02661 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03487 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03010 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_02211 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_01364 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D J159_01363 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D J159_01362 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D J159_00774 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D J159_00775 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D J159_00776 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D J159_00778 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA D J159_02051 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J159_00097 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J159_00019 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein D J159_00041 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J159_00060 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein D J159_00306 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J159_04056 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D J159_00096 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J159_04057 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J159_01584 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J159_01856 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J159_00496 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D J159_04292 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J159_00754 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC D J159_03708 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D J159_02906 ATPases involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D J159_00349 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D J159_00845 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:xcu03400] D J159_02988 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D J159_01621 deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D J159_03975 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J159_02613 DNA-3-methyladenine glycosylase (3mg) K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D J159_02719 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J159_01730 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J159_03515 S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D J159_02191 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J159_00911 mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J159_04064 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J159_01473 Uncharacterized protein related to deoxyribodipyrimidine photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D J159_03860 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D J159_01370 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J159_02987 DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D J159_03079 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D J159_04416 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J159_00725 Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D J159_04299 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J159_02177 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J159_04053 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J159_03041 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D J159_02010 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J159_01777 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J159_04238 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J159_01320 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D J159_01386 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D J159_02793 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D J159_02240 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D J159_02724 Excinuclease Cho K05984 cho; excinuclease Cho [EC:3.1.25.-] D J159_04278 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J159_01089 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J159_01090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J159_01120 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J159_03554 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D J159_03024 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J159_01441 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J159_02565 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D J159_01747 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D J159_02570 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J159_02926 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J159_01548 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J159_00112 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J159_03715 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J159_02944 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J159_01263 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J159_01221 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J159_01241 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J159_03065 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J159_02362 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J159_04469 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D J159_04470 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D J159_04466 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D J159_01883 RecA protein K03553 recA; recombination protein RecA D J159_03306 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J159_03303 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J159_03307 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J159_03968 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D J159_01402 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D J159_00113 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D J159_03551 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J159_01467 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J159_01243 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D J159_01665 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D J159_04355 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC D J159_03993 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D J159_02895 putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D J159_00245 Ku protein, prokaryotic K10979 ku; DNA end-binding protein Ku D J159_02575 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D J159_01781 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J159_00115 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J159_03957 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J159_00146 Topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J159_01211 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D J159_00640 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J159_02754 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D J159_02457 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D J159_03281 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J159_03725 nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS D J159_03780 Nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D J159_01882 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J159_01330 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D J159_01331 hypothetical protein K14160 imuA; protein ImuA D J159_01332 Nucleotidyltransferase/DNA polymerase involved in DNA repair K14161 imuB; protein ImuB D J159_01333 DNA-directed DNA polymerase III (polc) K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D J159_01884 hypothetical protein K03565 recX; regulatory protein D J159_04411 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D J159_02418 Superfamily I DNA and RNA helicase K03658 helD; DNA helicase IV [EC:5.6.2.4] D J159_03265 Rad3-related DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D J159_04158 Rad3-related DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D J159_02614 ATP dependent helicase, Lhr family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D J159_01480 DEXH box helicase, DNA ligase-associated K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D J159_04202 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J159_04201 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:xcu03029] D J159_02620 Cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D J159_02850 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D J159_02760 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D J159_01563 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D J159_01080 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J159_01094 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J159_01093 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D J159_01466 GTP-binding protein Era K03595 era; GTPase D J159_04048 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J159_02946 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J159_03311 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J159_04067 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J159_00422 amidohydrolase, AtzE family K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D J159_03921 DNA/RNA endonuclease G, NUC1 K01173 ENDOG; endonuclease G, mitochondrial D J159_04164 DNA/RNA endonuclease G, NUC1 K01173 ENDOG; endonuclease G, mitochondrial D J159_03065 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D J159_02362 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J159_01555 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D J159_01668 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J159_01667 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D J159_00661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J159_00660 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES D J159_01669 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D J159_02839 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D J159_03661 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D J159_02906 ATPases involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D J159_04029 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D J159_04035 Cytochrome oxidase assembly factor K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D J159_04030 Uncharacterized protein required for cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D J159_04505 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J159_04032 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D J159_02892 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 SCO1; protein SCO1 D J159_02692 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_01406 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:xcu02000] D J159_02235 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D J159_02353 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D J159_04340 ABC-type bacteriocin/lantibiotic exporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D J159_02961 ABC-type multidrug transport system, ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D J159_03896 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J159_01602 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J159_01678 ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J159_02495 thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D J159_02496 thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D J159_00167 ABC-type multidrug transport system, ATPase and permease component K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D J159_01846 ABC-type multidrug transport system, ATPase and permease component K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D J159_02549 ATPase component of ABC transporters with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein D J159_01676 ABC-type bacteriocin/lantibiotic exporter K02021 ABC.MR; putative ABC transport system ATP-binding protein D J159_01140 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J159_01141 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J159_01142 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J159_01143 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J159_03517 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D J159_03635 ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D J159_03518 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D J159_03519 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D J159_00973 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J159_03357 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D J159_00953 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein D J159_00972 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_03356 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_00951 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D J159_00971 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_03355 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_00952 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J159_03642 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D J159_02640 Spermidine/putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein D J159_02634 ABC-type spermidine/putrescine transport system, permease component II K11074 potI; putrescine transport system permease protein D J159_02635 ABC-type spermidine/putrescine transport system, permease component I K11075 potH; putrescine transport system permease protein D J159_02636 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D J159_00297 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D J159_00296 ABC-type proline/glycine betaine transport systems, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D J159_02219 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D J159_04474 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J159_03729 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J159_04473 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J159_03727 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J159_04472 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J159_03728 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J159_03730 ABC-type uncharacterized transport system, auxiliary component K18480 linN; cholesterol transport system auxiliary component D J159_04475 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein D J159_04476 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D J159_02471 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D J159_02470 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein D J159_02469 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein D J159_01724 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J159_01725 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D J159_01723 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D J159_01722 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D J159_01721 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D J159_03824 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D J159_03825 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D J159_03826 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein D J159_00980 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D J159_00981 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D J159_00982 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D J159_00984 ATPase component of various ABC-type transport systems, containing duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D J159_00293 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D J159_03759 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D J159_03758 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D J159_03712 putative permease K07091 lptF; lipopolysaccharide export system permease protein D J159_03711 putative permease K11720 lptG; lipopolysaccharide export system permease protein D J159_03131 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D J159_04178 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D J159_04179 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D J159_02229 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D J159_02230 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D J159_01819 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D J159_02487 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D J159_01820 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D J159_02486 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D J159_02485 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D J159_02484 heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D J159_03977 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J159_03978 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D J159_03856 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D J159_03909 protein of unknown function (DUF3526) K01992 ABC-2.P; ABC-2 type transport system permease protein D J159_03910 protein of unknown function (DUF3526)/ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D J159_01694 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D J159_04192 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D J159_03857 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J159_03911 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J159_01695 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J159_04191 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J159_03798 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J159_03799 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J159_04124 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J159_04125 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J159_00955 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D J159_03797 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J159_04123 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J159_00956 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J159_03096 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D J159_04027 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D J159_03964 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump D J159_01435 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D J159_01920 MFS transporter, sugar porter (SP) family K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D J159_04322 L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D J159_01705 L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D J159_03634 Arabinose efflux permease K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D J159_04440 Arabinose efflux permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D J159_00222 Arabinose efflux permease K03762 proP; MFS transporter, MHS family, proline/betaine transporter D J159_01945 Arabinose efflux permease K03762 proP; MFS transporter, MHS family, proline/betaine transporter D J159_04385 Nitrate/nitrite transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D J159_00467 Arabinose efflux permease K26744 vanK; MFS transporter, AAHS family, vanillate permease D J159_02387 Cyanate permease K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D J159_02501 Cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D J159_04052 Na+/melibiose symporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J159_04426 Arabinose efflux permease K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D J159_01353 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D J159_01504 Arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D J159_03002 Arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D J159_02638 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D J159_01589 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D J159_00433 Arabinose efflux permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D J159_01847 Arabinose efflux permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D J159_03139 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D J159_03138 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D J159_02664 Phosphocarrier protein HPr/phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D J159_02666 PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D J159_03137 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D J159_03134 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D J159_00478 MIP family channel protein K02440 glpF; glycerol uptake facilitator D J159_03589 Kef-type K+ transport systems, predicted NAD-binding component K10716 kch; voltage-gated potassium channel D J159_03167 Kef-type K+ transport systems, predicted NAD-binding component K10716 kch; voltage-gated potassium channel D J159_00321 ammonium transporter K03320 amt; ammonium transporter, Amt family D J159_02624 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_04485 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01131 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01437 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01604 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01617 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_02383 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_02554 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_03362 Archaeal flagella assembly protein J K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_01018 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_03969 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J159_02618 Glutathione S-transferase K03599 sspA; stringent starvation protein A D J159_03534 DNA uptake lipoprotein K07114 yfbK; Ca-activated chloride channel homolog D J159_03535 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog D J159_03467 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D J159_00540 Small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel D J159_02187 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D J159_03140 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter D J159_04205 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter D J159_02053 Flagellar motor component K02556 motA; chemotaxis protein MotA D J159_03850 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J159_02052 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J159_03851 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J159_02233 Biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB D J159_00120 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D J159_02234 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D J159_00121 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D J159_00122 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D J159_03301 Cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ D J159_03300 Cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR D J159_02632 Mg2+ and Co2+ transporter K03284 corA; magnesium transporter D J159_00721 Mg2+ and Co2+ transporter K03284 corA; magnesium transporter D J159_02157 camphor resistance protein CrcB K06199 crcB; fluoride exporter D J159_03593 putative membrane protein K08994 yneE; ion channel-forming bestrophin family protein D J159_01851 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D J159_01689 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D J159_03632 Phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D J159_03645 Phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D J159_01726 Phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D J159_01135 Outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D J159_00130 Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein D J159_01568 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein D J159_03459 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase D J159_03778 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D J159_03101 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D J159_03333 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein D J159_03352 TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter D J159_03659 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D J159_00290 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D J159_03529 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D J159_00946 TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D J159_00976 Outer membrane receptor for Fe3+-dicitrate K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03687 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03717 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_01274 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_04501 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_00238 Outer membrane receptor for Fe3+-dicitrate K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03494 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03771 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_02994 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_01146 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03586 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03603 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03608 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_01415 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03908 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_02334 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_01578 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03212 Outer membrane cobalamin receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03232 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_00835 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03323 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03325 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03326 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03360 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_03368 Outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_04187 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_02768 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J159_04289 Outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system D J159_03623 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J159_01630 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system D J159_03008 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D J159_00445 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18323 smeC; outer membrane protein, multidrug efflux system D J159_02751 Periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein D J159_02667 porin, OprB family K07267 oprB; porin D J159_01555 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D J159_02167 Beta-barrel assembly machine subunit BamB K17713 bamB; outer membrane protein assembly factor BamB D J159_03378 Beta-barrel assembly machine subunit BamD K05807 bamD; outer membrane protein assembly factor BamD D J159_01663 Beta-barrel assembly machine subunit BamE K06186 bamE; outer membrane protein assembly factor BamE D J159_04335 autotransporter secretion outer membrane protein TamA K07278 tamA; translocation and assembly module TamA D J159_04334 autotransporter secretion inner membrane protein TamB K09800 tamB; translocation and assembly module TamB D J159_03703 Head domain of trimeric autotransporter adhesin/Coiled stalk of trimeric autotransporter adhesin/Extended Signal Peptide of Type V secretion system K21449 ata; trimeric autotransporter adhesin D J159_03705 Autotransporter adhesin K21449 ata; trimeric autotransporter adhesin D J159_03130 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D J159_03129 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D J159_00990 Organic solvent tolerance protein OstA K04744 lptD; LPS-assembly protein D J159_02945 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D J159_03674 Tfp pilus assembly protein PilF K20543 bcsC; cellulose synthase operon protein C D J159_02630 Putative Mg2+ and Co2+ transporter CorC K06189 corC; hemolysin (HlyC) family protein D J159_03650 Major Facilitator Superfamily K16211 malY; maltose/moltooligosaccharide transporter D J159_02764 Major Facilitator Superfamily K16211 malY; maltose/moltooligosaccharide transporter D J159_00719 D-serine/D-alanine/glycine:proton symporter, AAT family K11737 cycA; D-serine/D-alanine/glycine transporter D J159_01533 S-methylmethionine:proton symporter, AAT family K16235 mmuP; S-methylmethionine transporter D J159_02523 ethanolamine:proton symporter, EAT family K16238 eat; ethanolamine permease D J159_01457 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D J159_02262 putative divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family D J159_04287 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D J159_02294 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D J159_02662 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J159_03486 Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D J159_00444 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18322 smeB; multidrug efflux pump D J159_01628 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K19585 oqxB; multidrug efflux pump D J159_04000 Cation/multidrug efflux pump K07788 mdtB; multidrug efflux pump D J159_04001 Cation/multidrug efflux pump K07789 mdtC; multidrug efflux pump D J159_00605 Membrane transporter of cations and cationic drugs K11741 sugE; quaternary ammonium compound-resistance protein SugE D J159_02379 putative permease, DMT superfamily K11939 rhtA; inner membrane transporter RhtA D J159_04127 putative permease K05786 rarD; chloramphenicol-sensitive protein RarD D J159_03225 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D J159_00453 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D J159_00839 choline/carnitine/betaine transport K02168 betT; choline/glycine/proline betaine transport protein D J159_04305 putative symporter K14393 actP; cation/acetate symporter D J159_03631 Na+/H+-dicarboxylate symporters K11103 dctA; aerobic C4-dicarboxylate transport protein D J159_03858 sodium/proton antiporter, CPA1 family K24163 nhaK; monovalent cation/hydrogen antiporter D J159_02451 Kef-type potassium/proton antiporter, CPA2 family K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D J159_04207 Kef-type potassium/proton antiporter, CPA2 family K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D J159_03328 Kef-type potassium/proton antiporter, CPA2 family K26735 KEA4_5_6; K+:H+ antiporter D J159_02970 transporter, CPA2 family K26731 CHX; K+:H+ antiporter D J159_00370 transporter, CPA2 family K26731 CHX; K+:H+ antiporter D J159_00425 Permease K06901 pbuG; adenine/guanine/hypoxanthine permease D J159_03365 Permease K06901 pbuG; adenine/guanine/hypoxanthine permease D J159_04423 benzoate transporter K05782 benE; benzoate membrane transport protein D J159_02990 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family D J159_00733 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family D J159_02183 NRAMP (natural resistance-associated macrophage protein) metal ion transporters K03322 mntH; manganese transport protein D J159_00582 multisubunit potassium/proton antiporter, PhaA subunit K05559 phaA; multicomponent K+:H+ antiporter subunit A D J159_00581 multisubunit potassium/proton antiporter, PhaC subunit K05560 phaC; multicomponent K+:H+ antiporter subunit C D J159_00580 multisubunit potassium/proton antiporter, PhaD subunit K05561 phaD; multicomponent K+:H+ antiporter subunit D D J159_00579 multisubunit potassium/proton antiporter, PhaE subunit K05562 phaE; multicomponent K+:H+ antiporter subunit E D J159_00578 multisubunit potassium/proton antiporter, PhaF subunit K05563 phaF; multicomponent K+:H+ antiporter subunit F D J159_00577 multisubunit potassium/proton antiporter, PhaG subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G D J159_01391 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D J159_00305 putative permease K24180 mleP; malate permease and related proteins D J159_03305 K+ transporter K03549 kup; KUP system potassium uptake protein D J159_03289 Lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D J159_01536 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter D J159_00670 hypothetical protein K09125 yhhQ; queuosine precursor transporter D J159_00900 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D J159_04324 putative membrane protein K23242 mntP; manganese efflux pump family protein D J159_03047 Carbon starvation protein, predicted membrane protein K23676 btsT; pyruvate/proton symporter D J159_01800 TonB family C-terminal domain K03832 tonB; periplasmic protein TonB D J159_02939 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D J159_02263 TonB family C-terminal domain K03832 tonB; periplasmic protein TonB D J159_03262 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D J159_00119 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D J159_04177 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D J159_03297 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D J159_03299 Cell division and transport-associated protein TolA K03646 tolA; colicin import membrane protein D J159_03298 tol-pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D J159_03599 vacuolar-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D J159_00678 malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D J159_00679 malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D J159_02639 Multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system D J159_01588 Multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system D J159_04288 Membrane-fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system D J159_02293 RND family efflux transporter, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D J159_02352 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D J159_02661 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03487 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03010 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_02211 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_00443 RND family efflux transporter, MFP subunit K18321 smeA; membrane fusion protein, multidrug efflux system D J159_01627 RND family efflux transporter, MFP subunit K19586 oqxA; membrane fusion protein, multidrug efflux system D J159_03999 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D J159_03688 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D J159_01998 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D J159_01999 Fe2+ transport system protein B K04759 feoB; ferrous iron transport protein B D J159_01963 TspO and MBR related protein K05770 TSPO; translocator protein D J159_04135 putative small secreted protein K16347 ecnA; entericidin A D J159_04136 putative small secreted protein K16347 ecnA; entericidin A D J159_01817 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D J159_02489 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D J159_00411 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D J159_02966 Outer membrane protein V K07274 mipA; MipA family protein C 02044 Secretion system [BR:xcu02044] D J159_02353 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D J159_02352 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D J159_03623 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J159_04340 ABC-type bacteriocin/lantibiotic exporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D J159_00812 Type IV pilus biogenesis/PDZ domain K02452 gspC; general secretion pathway protein C D J159_03691 type II secretion system protein D K02453 gspD; general secretion pathway protein D D J159_00813 type II secretion system protein D (GspD) K02453 gspD; general secretion pathway protein D D J159_04344 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J159_03701 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J159_00814 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J159_03700 Type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F D J159_00815 type II secretion system protein F K02455 gspF; general secretion pathway protein F D J159_03699 type II secretion system protein G K02456 gspG; general secretion pathway protein G D J159_00816 type II secretion system protein G (GspG) K02456 gspG; general secretion pathway protein G D J159_03698 type II secretion system protein H K02457 gspH; general secretion pathway protein H D J159_00817 type II secretion system protein H (GspH) K02457 gspH; general secretion pathway protein H D J159_03697 prepilin-type N-terminal cleavage/methylation domain K02458 gspI; general secretion pathway protein I D J159_00818 type II secretion system protein I (GspI) K02458 gspI; general secretion pathway protein I D J159_03696 hypothetical protein K02459 gspJ; general secretion pathway protein J D J159_00819 type II secretion system protein J (GspJ) K02459 gspJ; general secretion pathway protein J D J159_03695 Type II secretory pathway, component PulK K02460 gspK; general secretion pathway protein K D J159_00820 type II secretion system protein K (GspK) K02460 gspK; general secretion pathway protein K D J159_03694 Tfp pilus assembly protein PilN K02461 gspL; general secretion pathway protein L D J159_00821 type II secretion system protein L (GspL) K02461 gspL; general secretion pathway protein L D J159_03693 Type II secretion system (T2SS), protein M subtype b K02462 gspM; general secretion pathway protein M D J159_00822 type II secretion system protein M (GspM) K02462 gspM; general secretion pathway protein M D J159_03692 hypothetical protein K02463 gspN; general secretion pathway protein N D J159_00823 type II secretion system protein N (GspN) K02463 gspN; general secretion pathway protein N D J159_03407 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J159_03405 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J159_03404 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J159_03955 Tfp pilus assembly protein, major pilin PilA K02650 pilA; type IV pilus assembly protein PilA D J159_03403 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D J159_03406 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D J159_02830 prepilin-type N-terminal cleavage/methylation domain K02655 pilE; type IV pilus assembly protein PilE D J159_02164 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D J159_03260 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG D J159_01285 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J159_03259 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J159_03258 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D J159_03257 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J159_03544 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D J159_03543 Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D J159_03542 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D J159_03541 Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D J159_03540 type IV pilus secretin (or competence protein) PilQ K02666 pilQ; type IV pilus assembly protein PilQ D J159_03084 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D J159_03765 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D J159_03083 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D J159_02832 prepilin-type N-terminal cleavage/methylation domain K02672 pilW; type IV pilus assembly protein PilW D J159_02831 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D J159_01264 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D J159_02833 prepilin-type N-terminal cleavage/methylation domain K08084 fimT; type IV fimbrial biogenesis protein FimT D J159_02887 FimV N-terminal domain K08086 fimV; pilus assembly protein FimV D J159_03111 competence protein ComEA helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA D J159_02232 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D J159_00535 Type II secretory pathway, component PulD K03219 yscC; type III secretion protein C D J159_00519 hypothetical protein K03220 yscD; type III secretion protein D D J159_00529 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J D J159_00531 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L D J159_00532 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D J159_02950 hypothetical protein K04057 yscP; type III secretion protein P D J159_00523 type III secretion system apparatus protein YscQ/HrcQ K03225 yscQ; type III secretion protein Q D J159_00522 type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R D J159_00521 type III secretion protein, HrpO family K03227 yscS; type III secretion protein S D J159_00534 type III secretion protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T D J159_00526 type III secretion protein, YscU/HrpY family K03229 yscU; type III secretion protein U D J159_00525 Type III secretory pathway, component EscV K03230 yscV; type III secretion protein V D J159_00527 type III secretion protein HrpB1/HrpK K18373 hrpB1; type III secretion protein HrpB1 D J159_00528 type III secretion protein HrpB2 K18374 hrpB2; type III secretion inner rod protein HrpB2 D J159_00517 hypothetical protein K18375 hrpE; type III secretion hrp pilus HrpE D J159_00513 NolX protein K18376 hrpF; type III secretion translocon protein HrpF D J159_00537 Soluble lytic murein transglycosylase K18377 hpa2; lysozyme-related protein Hpa2 D J159_00536 hypothetical protein K18378 hpa1; type III secretion harpin protein Hpa1 D J159_00520 hypothetical protein K18379 hpaA; type III secretion regulatory protein HpaA D J159_00516 Tir chaperone protein (CesT) family K18380 hpaB; type III secretion control protein HpaB D J159_00524 type III secretion protein HpaP K18381 hpaC; type III secretion control protein HpaP D J159_02081 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D J159_02082 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D J159_02099 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF D J159_02097 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D J159_02096 ATPase FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D J159_02091 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D J159_02090 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D J159_02089 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D J159_02087 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D J159_02086 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D J159_00078 Transglycosylase SLT domain K03194 virB1; type IV secretion system protein VirB1 D J159_02784 Transglycosylase SLT domain K03194 virB1; type IV secretion system protein VirB1 D J159_00089 TrbC/VIRB2 family K03197 virB2; type IV secretion system protein VirB2 D J159_02783 TrbC/VIRB2 family K03197 virB2; type IV secretion system protein VirB2 D J159_02782 Type IV secretory pathway, VirB3 component K03198 virB3; type IV secretion system protein VirB3 D J159_00087 Type IV secretory pathway, VirB4 component K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D J159_02781 type IV secretion/conjugal transfer ATPase, VirB4 family K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D J159_00086 Type IV secretion system protein K03200 virB5; type IV secretion system protein VirB5 D J159_02780 hypothetical protein K03200 virB5; type IV secretion system protein VirB5 D J159_00083 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J159_02775 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J159_02779 Type IV secretory pathway, VirB6 component K03201 virB6; type IV secretion system protein VirB6 D J159_00082 Type IV secretory pathway, component VirB8 K03203 virB8; type IV secretion system protein VirB8 D J159_02788 Type IV secretory pathway, component VirB8 K03203 virB8; type IV secretion system protein VirB8 D J159_00081 P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D J159_02787 Type IV secretory pathway, VirB9 component K03204 virB9; type IV secretion system protein VirB9 D J159_02786 Type IV secretory pathway, VirB10 component K03195 virB10; type IV secretion system protein VirB10 D J159_00080 Type IV secretory pathway, VirB10 component K03195 virB10; type IV secretion system protein VirB10 D J159_00079 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D J159_02785 P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D J159_02790 Type IV secretory pathway, VirD4 component K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D J159_02355 ATPases involved in chromosome partitioning K12055 K12055; chromosome partitioning related protein ParA D J159_02347 integrating conjugative element relaxase, PFL_4751 family K12070 traI; conjugal transfer pilus assembly protein TraI D J159_02412 conjugative coupling factor TraD, TOL family K12071 traD; conjugal transfer pilus assembly protein TraD D J159_03707 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D J159_03459 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase D J159_04247 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D J159_04248 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK D J159_04249 type VI secretion protein, VC_A0114 family K11893 impJ; type VI secretion system protein ImpJ D J159_04268 type VI secretion protein, VC_A0111 family K11895 impH; type VI secretion system protein ImpH D J159_04269 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG D J159_04270 type VI secretion system lysozyme-like protein K11897 impF; type VI secretion system protein ImpF D J159_04273 type VI secretion protein, EvpB/VC_A0108 family K11900 impC; type VI secretion system protein ImpC D J159_04274 hypothetical protein K11901 impB; type VI secretion system protein ImpB D J159_04240 type VI secretion-associated protein, ImpA family K11902 impA; type VI secretion system protein ImpA D J159_04272 Hemolysin-coregulated protein (uncharacterized) K11903 hcp; type VI secretion system secreted protein Hcp D J159_04252 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D J159_04267 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D J159_04246 type VI secretion-associated protein, BMA_A0400 family K11890 impM; type VI secretion system protein ImpM D J159_04250 FHA domain protein K11894 impI; type VI secretion system protein ImpI D J159_04271 Protein of avirulence locus involved in temperature-dependent protein secretion K11898 impE; type VI secretion system protein ImpE D J159_01565 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J159_01569 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J159_01568 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein D J159_01567 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J159_01570 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J159_00910 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J159_00336 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D J159_02673 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D J159_01082 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D J159_02672 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D J159_02869 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D J159_01116 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D J159_01427 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J159_02718 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J159_02674 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D J159_04505 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J159_04350 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D J159_04349 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D J159_04348 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:xcu02042] D J159_01851 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D J159_01689 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D J159_00192 putative membrane protein, hemolysin III-like protein K11068 hlyIII; hemolysin III D J159_03205 channel protein, hemolysin III family K11068 hlyIII; hemolysin III D J159_01147 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J159_03317 phospholipase C, phosphocholine-specific, Pseudomonas-type K01114 plc; phospholipase C [EC:3.1.4.3] D J159_04079 N-acetyl-beta-hexosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 02022 Two-component system [BR:xcu02022] D J159_01165 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J159_01166 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D J159_04151 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J159_04152 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D J159_03020 Signal transduction histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D J159_03021 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D J159_00442 Signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J159_00441 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07664 baeR; two-component system, OmpR family, response regulator BaeR D J159_00880 Osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D J159_00881 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D J159_03643 Signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D J159_03644 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07774 tctD; two-component system, OmpR family, response regulator TctD D J159_00849 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J159_04103 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D J159_00850 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D J159_02258 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D J159_04121 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D J159_04120 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07693 desR; two-component system, NarL family, response regulator DesR D J159_02315 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479 K02479; two-component system, NarL family, response regulator D J159_00739 putative signal transduction protein with a C-terminal ATPase domain K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J159_00740 two component transcriptional regulator, LytTR family K08083 algR; two-component system, LytTR family, response regulator AlgR D J159_02289 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D J159_00322 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J159_00323 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D J159_03398 Signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J159_03399 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D J159_00341 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 flgR; two-component system, NtrC family, response regulator D J159_02047 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02075 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_03031 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02048 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_02077 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_03436 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_02032 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_01419 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_03036 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_03882 Methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D J159_02132 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D J159_03256 Chemotaxis protein histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D J159_03260 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG D J159_01285 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J159_03259 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J159_03255 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D J159_01811 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13589 cpdR; two-component system, cell cycle response regulator CpdR D J159_02022 Signal transduction histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] D J159_02021 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K13815 rpfG; two-component system, response regulator RpfG D J159_01942 Signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D J159_01941 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 regA; two-component system, response regulator RegA D J159_00802 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:xcu02035] D J159_02047 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02075 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_03031 Chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D J159_02050 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_02611 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_03033 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D J159_02033 Chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D J159_02034 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J159_03035 Methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D J159_02032 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_01419 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_03036 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D J159_03882 Methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D J159_02048 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_02077 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_03436 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D J159_02076 Chemotaxis protein K03414 cheZ; chemotaxis protein CheZ D J159_02132 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D J159_02038 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_00731 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_03920 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02041 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_01807 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02039 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03288 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03609 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02612 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_01888 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02036 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02043 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02044 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D J159_02141 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_03032 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02316 HAMP domain K03406 mcp; methyl-accepting chemotaxis protein D J159_03373 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02035 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02046 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02037 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02040 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D J159_02097 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D J159_02096 ATPase FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D J159_02095 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D J159_02090 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D J159_02089 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D J159_02087 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D J159_02086 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D J159_02081 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D J159_02082 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D J159_02098 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D J159_02092 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D J159_02091 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D J159_02099 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF D J159_02124 Flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D J159_02133 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D J159_02125 Flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D J159_02093 Flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D J159_02100 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D J159_02094 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D J159_02131 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D J159_02130 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D J159_02129 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D J159_02127 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D J159_02126 flagellar basal-body rod protein FlgG, Gram-negative bacteria K02392 flgG; flagellar basal-body rod protein FlgG D J159_02123 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D J159_02128 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D J159_02122 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D J159_02121 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D J159_02120 Flagellin K02406 fliC; flagellin D J159_02119 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D J159_02118 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS D J159_02078 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D J159_02053 Flagellar motor component K02556 motA; chemotaxis protein MotA D J159_03850 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D J159_02052 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J159_03851 Flagellar motor protein K02557 motB; chemotaxis protein MotB D J159_02112 transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D J159_02134 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM D J159_02080 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D J159_02079 ATPases involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG D J159_03260 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02657 pilG; twitching motility two-component system response regulator PilG D J159_01285 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J159_03259 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D J159_03258 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D J159_03257 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J159_03256 Chemotaxis protein histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D J159_03399 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D J159_03398 Signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J159_03084 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D J159_03765 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D J159_03083 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D J159_03255 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D J159_03254 Chemotaxis signal transduction protein K06598 chpC; chemosensory pili system protein ChpC D J159_03405 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J159_03404 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D J159_03955 Tfp pilus assembly protein, major pilin PilA K02650 pilA; type IV pilus assembly protein PilA D J159_03403 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D J159_03406 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D J159_03407 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J159_02164 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D J159_03540 type IV pilus secretin (or competence protein) PilQ K02666 pilQ; type IV pilus assembly protein PilQ D J159_03541 Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D J159_03542 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D J159_03543 Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D J159_03544 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D J159_01264 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D J159_02832 prepilin-type N-terminal cleavage/methylation domain K02672 pilW; type IV pilus assembly protein PilW D J159_02831 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D J159_02830 prepilin-type N-terminal cleavage/methylation domain K02655 pilE; type IV pilus assembly protein PilE D J159_01565 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J159_01569 P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein D J159_01568 P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein D J159_01567 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D J159_01570 putative secreted protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:xcu04812] D J159_00774 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D J159_00906 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J159_00905 cell division protein FtsA K03590 ftsA; cell division protein FtsA D J159_01364 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D J159_01363 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D J159_01362 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D J159_02051 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J159_00097 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J159_00019 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein D J159_00041 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J159_00060 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein D J159_00306 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D J159_04056 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D J159_00096 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J159_04057 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:xcu04147] D J159_02692 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_01406 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D J159_03503 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D J159_01861 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J159_03511 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J159_03506 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J159_03504 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J159_04494 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J159_03144 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J159_00661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J159_01668 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D J159_01933 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J159_04171 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J159_04378 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J159_00667 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D J159_02448 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J159_01080 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J159_01094 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D J159_01244 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J159_04027 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D J159_02024 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J159_00328 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01489 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J159_01355 Oligoendopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D J159_00927 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J159_03596 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J159_02551 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J159_02506 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J159_02512 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J159_03760 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D J159_00236 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J159_01446 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J159_03233 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J159_00271 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J159_00546 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J159_00477 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D J159_02642 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_02644 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_00319 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J159_04167 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D J159_00573 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D J159_02264 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D J159_02924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J159_01988 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J159_00133 Lactate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J159_00631 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J159_03816 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_01681 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J159_03744 electron transfer flavoprotein alpha subunit apoprotein K03522 fixB; electron transfer flavoprotein alpha subunit D J159_02218 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J159_04208 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D J159_02870 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J159_03040 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J159_00744 Bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein D J159_04389 Bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein D J159_02727 Bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein D J159_04083 Bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:xcu02048] D J159_03993 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D J159_03994 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 D J159_03987 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D J159_03992 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D J159_03990 CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG K19117 csd1; CRISPR-associated protein Csd1 D J159_03989 CRISPR-associated protein (Cas_Csd1) K19117 csd1; CRISPR-associated protein Csd1 D J159_03991 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2 D J159_03988 CRISPR-associated protein, Cas5d family K19119 cas5d; CRISPR-associated protein Cas5d D J159_02808 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D J159_02364 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J159_03410 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE D J159_02059 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE D J159_03029 Toxin SymE, type I toxin-antitoxin system K19048 symE; toxic protein SymE D J159_00074 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D J159_02338 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE D J159_00027 Growth inhibitor K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D J159_00028 Growth regulator K18842 chpS; antitoxin ChpS D J159_00301 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J159_00302 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D J159_00891 Post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA D J159_01272 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D J159_00194 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D J159_01271 putative addiction module antidote protein, CC2985 family K07746 parD1_3_4; antitoxin ParD1/3/4 D J159_01328 death-on-curing family protein K07341 doc; death on curing protein D J159_00101 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D J159_00102 Virulence-associated protein K18829 mvpT; antitoxin VapB D J159_04447 putative nucleic acid-binding protein, contains PIN domain K07062 fitB; toxin FitB [EC:3.1.-.-] D J159_04446 Plasmid stability protein K21495 fitA; antitoxin FitA D J159_00906 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J159_00774 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D J159_01584 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J159_01856 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J159_03013 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J159_02228 hypothetical protein K19168 cptA; toxin CptA D J159_02227 hypothetical protein K09159 cptB; antitoxin CptB C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:xcu04052] D J159_00792 Nicotinic acid phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules [BR:xcu04090] D J159_04171 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J159_01355 Oligoendopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:xcu01504] D J159_04426 Arabinose efflux permease K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D J159_03521 TonB family C-terminal domain K02172 blaR1; bla regulator protein blaR1 D J159_00181 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D J159_03522 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D J159_03319 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] D J159_01371 D-Ala-D-Ala carboxypeptidase. Metallo peptidase. MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D J159_04010 D-Ala-D-Ala dipeptidase vanX. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J159_01511 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D J159_04151 Signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D J159_04152 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D J159_02661 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03487 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_03010 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_02211 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J159_02662 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K18138 acrB; multidrug efflux pump D J159_03486 Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D J159_03008 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D J159_01630 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system D J159_03621 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D J159_03623 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D J159_01624 Transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:xcu00536] D J159_04079 N-acetyl-beta-hexosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] D J159_01959 filamentous hemagglutinin family N-terminal domain K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xcu00537] D J159_02924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D J159_00723 Neutral trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D J159_04494 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J159_03144 Zn-dependent dipeptidase, microsomal dipeptidase-like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D J159_04079 N-acetyl-beta-hexosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:xcu03100] D J159_02578 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_04092 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_02206 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_02208 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_04046 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_04421 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J159_00511 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_01173 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_01892 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_01893 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_01953 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J159_02794 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J159_01213 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J159_01214 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J159_02243 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D J159_00609 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J159_01072 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J159_01927 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J159_02205 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J159_02207 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J159_01078 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J159_02242 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J159_02244 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J159_03458 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J159_01174 tRNA-His K14226 tRNA-His; tRNA His D J159_04045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J159_04420 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J159_01590 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_01713 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_02203 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_02252 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_02868 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_01206 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J159_01203 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J159_03294 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J159_02853 tRNA-Met K14230 tRNA-Met; tRNA Met D J159_00610 tRNA-Met K14230 tRNA-Met; tRNA Met D J159_03936 tRNA-Met K14230 tRNA-Met; tRNA Met D J159_02726 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J159_01172 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J159_02500 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J159_02752 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J159_01223 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J159_01240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J159_01805 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J159_01887 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J159_01079 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J159_01396 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J159_04143 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J159_01081 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J159_01077 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D J159_01212 tRNA-Val K14237 tRNA-Val; tRNA Val D J159_01265 tRNA-Val K14237 tRNA-Val; tRNA Val D J159_02792 tRNA-Val K14237 tRNA-Val; tRNA Val D J159_04047 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J159_04422 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J159_04043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J159_04418 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J159_04042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J159_04417 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J159_01232 SRP_RNA K01983 ffs; SRP RNA D J159_00889 RNase_P_RNA K01978 rnpB; M1 RNA D J159_01658 tmRNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D J159_04070 Short-chain alcohol dehydrogenase of unknown specificity K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276] D J159_00354 Nucleoside-diphosphate-sugar epimerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D J159_03358 putative oxidoreductases (related to aryl-alcohol dehydrogenases) K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D J159_04330 Glucose dehydrogenase K05889 pvadh; polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6] D J159_04019 Glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D J159_01012 putative dehydrogenase K00118 gfo; glucose-fructose oxidoreductase [EC:1.1.99.28] D J159_00303 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D J159_01133 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D J159_00403 Putative NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D J159_03272 coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D J159_03732 Dehydrogenases (flavoproteins) K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D J159_01472 putative NAD/FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D J159_01134 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D J159_00916 putative NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D J159_01803 Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D J159_03924 Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D J159_01029 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D J159_01024 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D J159_03848 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D J159_04172 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D J159_00703 putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D J159_01796 Sulfite oxidase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D J159_03879 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D J159_02182 putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D J159_01899 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D J159_01030 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D J159_03075 peroxiredoxin, OsmC subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D J159_00398 peroxiredoxin, Ohr subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D J159_01889 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D J159_03046 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D J159_03102 putative iron-regulated protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D J159_00979 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D J159_01601 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D J159_03671 arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D J159_03274 coenzyme PQQ biosynthesis enzyme PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D J159_03622 Protein-L-isoaspartate carboxylmethyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D J159_01868 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D J159_01515 Cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D J159_01518 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D J159_04277 Acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D J159_01740 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D J159_03941 Sortase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D J159_02481 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D J159_02148 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D J159_01246 Transglutaminase-like enzymes, putative cysteine protease K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D J159_01377 Putative arginyl-tRNA:protein arginylyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D J159_00348 3-oxoacyl-[acyl-carrier-protein] synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20] D J159_04327 Cellobiose phosphorylase K18786 E2.4.1.321; cellobionic acid phosphorylase [EC:2.4.1.321] D J159_00683 triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D J159_00965 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D J159_03107 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D J159_02189 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D J159_00669 Glutamine synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D J159_00682 malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D J159_02552 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D J159_00541 Phosphoglycerol transferase K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D J159_03982 Isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D J159_03135 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D J159_03633 His Kinase A (phospho-acceptor) domain/Response regulator receiver domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/PAS fold K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3] D J159_04360 protein of unknown function (DUF303) K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D J159_01914 protein of unknown function (DUF303) K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D J159_03502 putative phosphatase-like proteinous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D J159_03474 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D J159_01349 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D J159_00274 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D J159_01385 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J159_03302 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J159_00307 Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D J159_04085 putative signal transduction protein containing sensor and EAL domains K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D J159_02657 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D J159_00468 putative domain HDIG K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D J159_00429 Sec-independent protein translocase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D J159_03675 Endoglucanase Y K20542 bcsZ; endoglucanase [EC:3.2.1.4] D J159_04379 Beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D J159_04382 Beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D J159_04384 Beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D J159_01191 Phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D J159_01449 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D J159_00694 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D J159_04359 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D J159_01916 Alpha-glucosidase, family 31 of glycosyl hydrolase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D J159_04011 Negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J159_01737 Negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J159_03670 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D J159_03951 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D J159_03147 tricorn interacting aminopeptidase F1. Serine peptidase. MEROPS family S33 K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101] D J159_03660 putative xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D J159_01252 MAF protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D J159_01248 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J159_00230 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J159_03538 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J159_00680 malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D J159_00681 malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D J159_00350 putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114] D J159_01308 yjeF C-terminal region, hydroxyethylthiazole kinase-related K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D J159_02568 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D J159_03666 Rhamnogalacturonase B, N-terminal K18195 RGL4; rhamnogalacturonan endolyase [EC:4.2.2.23] D J159_04321 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D J159_01733 FKBP-type peptidyl-prolyl cis-trans isomerases 1 K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D J159_00352 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1] D J159_03595 UDP-N-acetylmuramate--L-alanine ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D J159_01526 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D J159_02651 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D J159_01904 Ferredoxin K05524 fdxA; ferredoxin D J159_03743 electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D J159_01532 Lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein D J159_03085 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein D J159_02508 Acetyltransferase, including N-acetylase of ribosomal protein K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D J159_02456 Protein of unknown function (DUF1049) K08992 lapA; lipopolysaccharide assembly protein A D J159_02455 putative N-acetylglucosaminyl transferase K19804 lapB; lipopolysaccharide assembly protein B D J159_03180 Killing trait K21687 rpfA; resuscitation-promoting factor RpfA D J159_03745 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D J159_00332 Glycosyltransferase involved in LPS biosynthesis K07270 K07270; glycosyl transferase, family 25 D J159_03676 Bacterial cellulose synthase subunit K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D J159_00329 heme biosynthesis-associated TPR protein K02498 hemY; HemY protein D J159_01881 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D J159_00358 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D J159_00357 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D J159_04081 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism D J159_01619 putative flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D J159_03863 putative membrane protein K15977 K15977; putative oxidoreductase D J159_02311 putative membrane protein K15977 K15977; putative oxidoreductase D J159_00738 putative esterase K06999 K06999; phospholipase/carboxylesterase D J159_04204 Acyl-CoA synthetase (NDP forming) K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D J159_01477 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D J159_01608 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D J159_02555 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D J159_02200 Transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D J159_01483 putative exonuclease, DNA ligase-associated K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D J159_02145 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D J159_01207 trigger factor K03545 tig; trigger factor D J159_01795 putative membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D J159_01660 SsrA-binding protein K03664 smpB; SsrA-binding protein D J159_04082 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D J159_03045 putative redox protein, regulator of disulfide bond formation K07397 yhfA; putative redox protein D J159_02265 Thioredoxin-like protein and domains K07400 nfuA; Fe/S biogenesis protein NfuA D J159_03058 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D J159_02914 putative methylated DNA-protein cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D J159_03430 DNA repair protein radc K03630 radC; DNA repair protein RadC D J159_02326 DNA repair protein radc K03630 radC; DNA repair protein RadC D J159_02439 DNA repair protein radc K03630 radC; DNA repair protein RadC D J159_04066 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC D J159_04481 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D J159_00886 TIGR00252 family protein K07460 yraN; putative endonuclease D J159_03361 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease D J159_03953 DNA protecting protein DprA K04096 smf; DNA processing protein D J159_02155 Recombination protein MgsA K07478 ycaJ; putative ATPase D J159_02583 Transposase domain (DUF772)/Transposase DDE domain K07481 K07481; transposase, IS5 family D J159_00203 transposase K07483 K07483; transposase D J159_01200 transposase K07483 K07483; transposase D J159_01234 transposase K07483 K07483; transposase D J159_02829 transposase K07483 K07483; transposase D J159_03411 transposase K07483 K07483; transposase D J159_04338 transposase K07483 K07483; transposase D J159_04454 transposase K07483 K07483; transposase D J159_00461 transposase K07483 K07483; transposase D J159_02066 transposase K07483 K07483; transposase D J159_03480 transposase K07483 K07483; transposase D J159_00267 transposase K07483 K07483; transposase D J159_01177 transposase K07483 K07483; transposase D J159_02801 transposase K07483 K07483; transposase D J159_02250 transposase K07483 K07483; transposase D J159_00697 transposase K07483 K07483; transposase D J159_02281 transposase K07483 K07483; transposase D J159_02322 transposase K07483 K07483; transposase D J159_02377 transposase K07483 K07483; transposase D J159_03382 transposase K07483 K07483; transposase D J159_01289 transposase K07491 rayT; REP-associated tyrosine transposase D J159_00204 transposase K07497 K07497; putative transposase D J159_03412 transposase K07497 K07497; putative transposase D J159_03442 Transposase K07497 K07497; putative transposase D J159_03443 transposase K07497 K07497; putative transposase D J159_00092 transposase K07497 K07497; putative transposase D J159_00093 Transposase K07497 K07497; putative transposase D J159_00105 transposase K07497 K07497; putative transposase D J159_04339 transposase K07497 K07497; putative transposase D J159_04455 transposase K07497 K07497; putative transposase D J159_00004 Transposase K07497 K07497; putative transposase D J159_00005 transposase K07497 K07497; putative transposase D J159_00054 transposase K07497 K07497; putative transposase D J159_00055 Transposase K07497 K07497; putative transposase D J159_03479 transposase K07497 K07497; putative transposase D J159_00268 transposase K07497 K07497; putative transposase D J159_01176 transposase K07497 K07497; putative transposase D J159_02772 Transposase K07497 K07497; putative transposase D J159_02773 transposase K07497 K07497; putative transposase D J159_02802 transposase K07497 K07497; putative transposase D J159_01201 transposase K07497 K07497; putative transposase D J159_01235 transposase K07497 K07497; putative transposase D J159_02828 transposase K07497 K07497; putative transposase D J159_03664 Transposase K07497 K07497; putative transposase D J159_03665 transposase K07497 K07497; putative transposase D J159_02247 transposase K07497 K07497; putative transposase D J159_02248 Transposase K07497 K07497; putative transposase D J159_02249 transposase K07497 K07497; putative transposase D J159_03056 transposase K07497 K07497; putative transposase D J159_03057 Transposase K07497 K07497; putative transposase D J159_00696 transposase K07497 K07497; putative transposase D J159_02280 transposase K07497 K07497; putative transposase D J159_02321 transposase K07497 K07497; putative transposase D J159_03916 Transposase K07497 K07497; putative transposase D J159_03917 transposase K07497 K07497; putative transposase D J159_02378 transposase K07497 K07497; putative transposase D J159_01650 Transposase K07497 K07497; putative transposase D J159_00460 transposase K07497 K07497; putative transposase D J159_01651 transposase K07497 K07497; putative transposase D J159_02065 transposase K07497 K07497; putative transposase D J159_02531 Transposase K07497 K07497; putative transposase D J159_02584 transposase K07497 K07497; putative transposase D J159_02585 Transposase K07497 K07497; putative transposase D J159_03383 transposase K07497 K07497; putative transposase D J159_02069 Integrase core domain K07497 K07497; putative transposase D J159_02593 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D J159_01242 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D J159_04328 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D J159_03145 amino acid/polyamine/organocation transporter, APC superfamily K03293 TC.AAT; amino acid transporter, AAT family D J159_04487 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D J159_01985 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D J159_01986 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D J159_03009 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D J159_02212 Cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D J159_03646 citrate transporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D J159_03218 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D J159_00570 amino acid/peptide transporter (Peptide:H+ symporter), bacterial K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D J159_01593 amino acid/peptide transporter (Peptide:H+ symporter), bacterial K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D J159_01853 Phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D J159_01938 transporter, SSS family K03307 TC.SSS; solute:Na+ symporter, SSS family D J159_00943 Nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family D J159_01834 Membrane protein involved in the export of O-antigen and teichoic acid K03328 TC.PST; polysaccharide transporter, PST family D J159_02743 Membrane protein involved in the export of O-antigen and teichoic acid K03328 TC.PST; polysaccharide transporter, PST family C 99978 Cell growth D J159_00135 Membrane-bound metallopeptidase K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D J159_00622 Membrane protein required for beta-lactamase induction K03807 ampE; AmpE protein D J159_01128 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D J159_02626 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D J159_01898 putative ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase D J159_01812 RecA-superfamily ATPases implicated in signal transduction K08482 kaiC; circadian clock protein KaiC D J159_03828 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein D J159_01293 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein C 99992 Structural proteins D J159_02153 periplasmic chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D J159_01070 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D J159_04477 Surface lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D J159_01609 Outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB D J159_00796 putative outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB D J159_01870 metalloendopeptidase-like membrane protein K06194 nlpD; lipoprotein NlpD D J159_03513 Outer membrane protein W K07275 ompW; outer membrane protein D J159_03821 Outer membrane protein W K07275 ompW; outer membrane protein D J159_00742 Putative salt-induced outer membrane protein K07283 ydiY; putative salt-induced outer membrane protein D J159_01245 outer membrane lipoprotein, Slp family K07285 slp; outer membrane lipoprotein D J159_03206 Uncharacterized protein involved in outer membrane biogenesis K07290 yhjG; AsmA family protein D J159_03223 Membrane protein implicated in regulation of membrane protease activity K07340 ybbJ; inner membrane protein D J159_03796 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D J159_03018 Inner membrane protein involved in colicin E2 resistance K06143 creD; inner membrane protein D J159_01818 Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D J159_02488 Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D J159_01815 Uncharacterized protein involved in biosynthesis of c-type cytochromes K02200 ccmH; cytochrome c-type biogenesis protein CcmH D J159_02491 Uncharacterized protein involved in biosynthesis of c-type cytochromes K02200 ccmH; cytochrome c-type biogenesis protein CcmH D J159_02492 Cytochrome c biogenesis factor K02200 ccmH; cytochrome c-type biogenesis protein CcmH D J159_02750 Uncharacterized protein involved in exopolysaccharide biosynthesis K13661 gumC; GumC protein D J159_02748 hypothetical protein K13662 gumE; putative polymerase D J159_02165 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D J159_01720 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D J159_04414 Periplasmic glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein D J159_04498 Membrane protein TerC, possibly involved in tellurium resistance K05794 terC; tellurite resistance protein TerC D J159_00653 Uncharacterized protein involved in tolerance to divalent cations K03926 cutA; periplasmic divalent cation tolerance protein D J159_03251 Uncharacterized protein involved in copper resistance K06201 cutC; copper homeostasis protein D J159_00986 Uncharacterized protein affecting Mg2+/Co2+ transport K06195 apaG; ApaG protein D J159_02647 hemerythrin-like metal-binding domain K07216 hr; hemerythrin D J159_03788 Uncharacterized protein involved in copper resistance K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D J159_01153 putative membrane protein, required for colicin V production K03558 cvpA; membrane protein required for colicin V production D J159_02818 putative chitinase K03791 K03791; putative chitinase D J159_00586 putative chitinase K03791 K03791; putative chitinase D J159_00758 putative acyltransferase K02348 elaA; ElaA protein D J159_00800 putative periplasmic or secreted lipoprotein K04065 osmY; hyperosmotically inducible periplasmic protein D J159_03271 coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D J159_03273 coenzyme PQQ biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D J159_00191 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster K06877 K06877; DEAD/DEAH box helicase domain-containing protein D J159_02872 Truncated hemoglobin K06886 glbN; hemoglobin D J159_00291 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein D J159_04005 putative hydrolase (HAD superfamily) K07025 K07025; putative hydrolase of the HAD superfamily D J159_00618 Iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D J159_03095 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB D J159_03097 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D J159_00885 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D J159_00937 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D J159_01060 tRNA-processing RNAse BN K07058 K07058; membrane protein D J159_04025 putative membrane protein K07058 K07058; membrane protein D J159_02516 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE D J159_02257 putative sulfurtransferase K07146 K07146; UPF0176 protein D J159_02142 Uncharacterized protein involved in purine metabolism K07153 hflD; high frequency lysogenization protein D J159_00962 hypothetical protein K03744 lemA; LemA protein D J159_01701 hypothetical protein K03745 slyX; SlyX protein D J159_03954 hypothetical protein K03747 smg; Smg protein D J159_03944 putative membrane protein K08981 K08981; putative membrane protein D J159_03217 putative membrane protein K08987 K08987; putative membrane protein D J159_03165 putative membrane protein K08989 K08989; putative membrane protein D J159_02173 putative outer membrane protein K08995 K08995; putative membrane protein D J159_04429 hypothetical protein K09858 K09858; SEC-C motif domain protein D J159_01502 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D J159_04211 Ankyrin repeat K06867 K06867; uncharacterized protein D J159_04156 Ankyrin repeat K06867 K06867; uncharacterized protein D J159_02072 radical SAM additional 4Fe4S-binding SPASM domain K06871 K06871; uncharacterized protein D J159_00963 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein D J159_02303 Stress-induced bacterial acidophilic repeat motif K06884 K06884; uncharacterized protein D J159_02723 Stress-induced bacterial acidophilic repeat motif K06884 K06884; uncharacterized protein D J159_04096 Alpha/beta hydrolase family K06889 K06889; uncharacterized protein D J159_03638 Ketosteroid isomerase-related protein K06893 K06893; uncharacterized protein D J159_00465 hypothetical protein K06940 K06940; uncharacterized protein D J159_00351 putative Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein D J159_04141 putative GTPase K06945 K06945; uncharacterized protein D J159_01479 putative phosphoesterase K06953 K06953; uncharacterized protein D J159_01520 putative NAD/FAD-binding protein K06954 K06954; uncharacterized protein D J159_01596 putative acetyltransferase K06975 K06975; uncharacterized protein D J159_01365 putative acetyltransferase, GNAT superfamily K06977 K06977; uncharacterized protein D J159_02502 putative hydrolase, CocE/NonD family K06978 K06978; uncharacterized protein D J159_00714 putative archaeal methyltransferase K06983 K06983; uncharacterized protein D J159_02886 putative enzyme related to lactoylglutathione lyase K06996 K06996; uncharacterized protein D J159_00368 putative enzyme related to lactoylglutathione lyase K06996 K06996; uncharacterized protein D J159_00390 putative extracellular nuclease K07004 K07004; uncharacterized protein D J159_00568 putative extracellular nuclease K07004 K07004; uncharacterized protein D J159_03777 putative hydrolase of the alpha/beta superfamily K07017 K07017; uncharacterized protein D J159_00395 putative hydrolase of the alpha/beta superfamily K07018 K07018; uncharacterized protein D J159_00312 putative hydrolase of the alpha/beta-hydrolase fold K07019 K07019; uncharacterized protein D J159_00108 putative toxin-antitoxin system toxin component, PIN family K07063 K07063; uncharacterized protein D J159_00034 putative toxin-antitoxin system toxin component, PIN family K07063 K07063; uncharacterized protein D J159_04102 TIGR01777 family protein K07071 K07071; uncharacterized protein D J159_04430 putative permease K07090 K07090; uncharacterized protein D J159_00788 putative permease K07090 K07090; uncharacterized protein D J159_02941 putative phosphatase K07093 K07093; uncharacterized protein D J159_01936 putative phosphatase K07093 K07093; uncharacterized protein D J159_00272 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein D J159_03093 Proteins containing SET domain K07117 K07117; uncharacterized protein D J159_00887 Putative lipoprotein K07121 K07121; uncharacterized protein D J159_02871 Short-chain dehydrogenase of various substrate specificities K07124 K07124; uncharacterized protein D J159_03103 Sel1 repeat K07126 K07126; uncharacterized protein D J159_02917 putative membrane protein K07148 K07148; uncharacterized protein D J159_03594 Uncharacterized protein, similar to the N-terminal domain of Lon protease K07157 K07157; uncharacterized protein D J159_02519 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D J159_01324 hypothetical protein K09003 K09003; uncharacterized protein D J159_03573 hypothetical protein K09005 K09005; uncharacterized protein D J159_04024 hypothetical protein K09117 K09117; uncharacterized protein D J159_00784 hypothetical protein K09158 K09158; uncharacterized protein D J159_01736 hypothetical protein K09164 K09164; uncharacterized protein D J159_02564 hypothetical protein K09164 K09164; uncharacterized protein D J159_03943 hypothetical protein K09167 K09167; uncharacterized protein D J159_01519 hypothetical protein K09701 K09701; uncharacterized protein D J159_02300 hypothetical protein K09702 K09702; uncharacterized protein D J159_03243 hypothetical protein K09704 K09704; uncharacterized protein D J159_02739 hypothetical protein K09705 K09705; uncharacterized protein D J159_02953 hypothetical protein K09779 K09779; uncharacterized protein D J159_02476 hypothetical protein K09780 K09780; uncharacterized protein D J159_00543 hypothetical protein K09781 K09781; uncharacterized protein D J159_00750 hypothetical protein K09790 K09790; uncharacterized protein D J159_01607 hypothetical protein K09793 K09793; uncharacterized protein D J159_04203 hypothetical protein K09799 K09799; uncharacterized protein D J159_01662 hypothetical protein K09801 K09801; uncharacterized protein D J159_02937 hypothetical protein K09807 K09807; uncharacterized protein D J159_02320 hypothetical protein K09822 K09822; uncharacterized protein D J159_03566 hypothetical protein K09895 K09895; uncharacterized protein D J159_04212 hypothetical protein K09902 K09902; uncharacterized protein D J159_00921 hypothetical protein K09912 K09912; uncharacterized protein D J159_04408 hypothetical protein K09915 K09915; uncharacterized protein D J159_02149 hypothetical protein K09919 K09919; uncharacterized protein D J159_02190 hypothetical protein K09920 K09920; uncharacterized protein D J159_00753 hypothetical protein K09921 K09921; uncharacterized protein D J159_00950 hypothetical protein K09922 K09922; uncharacterized protein D J159_00361 hypothetical protein K09924 K09924; uncharacterized protein D J159_03118 hypothetical protein K09938 K09938; uncharacterized protein D J159_03104 hypothetical protein K09939 K09939; uncharacterized protein D J159_02929 hypothetical protein K09940 K09940; uncharacterized protein D J159_03832 hypothetical protein K09941 K09941; uncharacterized protein D J159_02450 hypothetical protein K09948 K09948; uncharacterized protein D J159_02695 hypothetical protein K09955 K09955; uncharacterized protein D J159_04456 hypothetical protein K09958 K09958; uncharacterized protein D J159_00242 hypothetical protein K09959 K09959; uncharacterized protein D J159_02563 hypothetical protein K09973 K09973; uncharacterized protein D J159_03110 hypothetical protein K09975 K09975; uncharacterized protein D J159_03169 hypothetical protein K09980 K09980; uncharacterized protein D J159_04119 Trehalose utilization K09992 K09992; uncharacterized protein D J159_00190 putative exonuclease K07502 yprB; uncharacterized protein D J159_01852 Phosphate transport regulator (distant-like protein of PhoU) K07220 K07220; uncharacterized protein D J159_00672 putative nucleoside-diphosphate-sugar epimerase K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024