+D GENES KO
#
KEGG Orthology (KO) - Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ypi00010]
D YpsIP31758_1332 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YpsIP31758_0302 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YpsIP31758_0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YpsIP31758_3621 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YpsIP31758_0100 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YpsIP31758_0850 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YpsIP31758_4026 putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YpsIP31758_0096 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YpsIP31758_1987 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YpsIP31758_0849 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YpsIP31758_2861 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YpsIP31758_3480 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YpsIP31758_0075 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YpsIP31758_3316 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YpsIP31758_1749 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YpsIP31758_2024 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YpsIP31758_1737 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YpsIP31758_3363 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YpsIP31758_3362 aceF; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_1803 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YpsIP31758_2473 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YpsIP31758_1963 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YpsIP31758_1862 aldehyde dehydrogenase (NAD) family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D YpsIP31758_3835 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YpsIP31758_2858 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YpsIP31758_0029 HAD hydrolase, IA family K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D YpsIP31758_1099 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YpsIP31758_1989 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D YpsIP31758_3978 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YpsIP31758_3951 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YpsIP31758_2729 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YpsIP31758_1315 PTS system, glucose-specific EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_1586 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:ypi00020]
D YpsIP31758_2886 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D YpsIP31758_1920 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YpsIP31758_3359 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YpsIP31758_1615 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YpsIP31758_2881 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D YpsIP31758_2880 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_2878 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YpsIP31758_2879 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YpsIP31758_2883 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YpsIP31758_2882 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YpsIP31758_2885 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YpsIP31758_2884 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YpsIP31758_3667 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YpsIP31758_3668 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YpsIP31758_3669 frdC; fumarate reductase, C subunit K00246 frdC; succinate dehydrogenase subunit C
D YpsIP31758_3670 frdD; fumarate reductase, D subunit K00247 frdD; succinate dehydrogenase subunit D
D YpsIP31758_3271 fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YpsIP31758_1873 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YpsIP31758_3616 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YpsIP31758_3978 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YpsIP31758_3363 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YpsIP31758_3362 aceF; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YpsIP31758_1803 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ypi00030]
D YpsIP31758_0302 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YpsIP31758_2022 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YpsIP31758_2846 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D YpsIP31758_2436 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YpsIP31758_3962 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YpsIP31758_3248 putative transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YpsIP31758_3249 putative transketolase. N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YpsIP31758_0847 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YpsIP31758_3472 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D YpsIP31758_0855 rpiA2; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D YpsIP31758_2690 rpiA1; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D YpsIP31758_3289 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YpsIP31758_2652 deoC2; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YpsIP31758_3498 deoC1; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YpsIP31758_0350 putative deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YpsIP31758_0008 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YpsIP31758_0349 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YpsIP31758_3496 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YpsIP31758_1099 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YpsIP31758_3567 putative phosphonate metabolism ribose 1,5-bisphosphokinase PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D YpsIP31758_2070 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YpsIP31758_1476 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D YpsIP31758_2021 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YpsIP31758_4137 tkrA; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YpsIP31758_4020 gntK; thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YpsIP31758_1469 idnK; thermosensitive gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YpsIP31758_4062 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D YpsIP31758_0850 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YpsIP31758_4026 putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YpsIP31758_3621 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YpsIP31758_0100 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YpsIP31758_0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ypi00040]
D YpsIP31758_3511 pemA; pectinesterase A K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D YpsIP31758_4066 periplasmic pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D YpsIP31758_1692 periplasmic pectate lyase K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D YpsIP31758_1682 ogl; oligogalacturonide lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D YpsIP31758_1696 cupin domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D YpsIP31758_1694 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D YpsIP31758_1693 kduD1; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D YpsIP31758_0935 kduD2; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D YpsIP31758_0491 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D YpsIP31758_0492 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D YpsIP31758_0493 uxaA; altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D YpsIP31758_2699 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D YpsIP31758_2702 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D YpsIP31758_1968 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YpsIP31758_2437 putative UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_2438 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_3270 lyxK; cryptic L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D YpsIP31758_3269 putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D YpsIP31758_3262 araD2; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YpsIP31758_1910 araD1; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YpsIP31758_3962 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YpsIP31758_1887 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D YpsIP31758_1886 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D YpsIP31758_2691 carbohydrate kinase, FGGY family K00854 xylB; xylulokinase [EC:2.7.1.17]
D YpsIP31758_4103 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YpsIP31758_4102 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YpsIP31758_3755 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D YpsIP31758_3757 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D YpsIP31758_1812 putative D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D YpsIP31758_4027 conserved hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D YpsIP31758_0368 pentulose kinase, FGGY family K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:ypi00051]
D YpsIP31758_3140 putative manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YpsIP31758_1874 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YpsIP31758_3037 manB1; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YpsIP31758_1525 manB2; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YpsIP31758_3039 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YpsIP31758_3041 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YpsIP31758_3040 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YpsIP31758_2410 mandelate racemase/muconate lactonizing enzyme family protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D YpsIP31758_2412 oxidoreductase, short chain dehydrogenase/reductase family protein K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D YpsIP31758_2411 fumarylacetoacetate hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D YpsIP31758_3756 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D YpsIP31758_3755 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D YpsIP31758_3757 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D YpsIP31758_0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YpsIP31758_3621 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YpsIP31758_0100 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YpsIP31758_4127 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D YpsIP31758_2682 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YpsIP31758_4102 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YpsIP31758_1812 putative D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D YpsIP31758_0850 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YpsIP31758_4026 putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YpsIP31758_0096 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YpsIP31758_3289 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YpsIP31758_2681 fruA; PTS system, fructose-specific EIIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YpsIP31758_2368 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YpsIP31758_2369 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component
D YpsIP31758_2370 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D YpsIP31758_4128 mtlA; PTS system, mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YpsIP31758_1446 HAD-superfamily hydrolase, subfamily IA, variant 3 K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D YpsIP31758_1697 HAD hydrolase, IA family K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:ypi00052]
D YpsIP31758_2858 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YpsIP31758_2857 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YpsIP31758_2856 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YpsIP31758_2855 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YpsIP31758_2437 putative UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_2438 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_1099 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YpsIP31758_1332 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YpsIP31758_1629 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YpsIP31758_0918 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D YpsIP31758_2395 agaN; alpha-galactosidase AgaN K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YpsIP31758_0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YpsIP31758_0929 class II aldolase, tagatose bisphosphate family K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D YpsIP31758_0942 agaZ; D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D YpsIP31758_3131 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YpsIP31758_0924 glycosyl hydrolase, family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YpsIP31758_0937 agaF; PTS system, N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_0940 agaV; PTS system, N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2 K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YpsIP31758_0939 agaW; PTS system, N-acetylgalactosamine-specific IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YpsIP31758_0938 agaE; PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YpsIP31758_0936 putative N-acetylgalactosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25]
D YpsIP31758_0941 putative tagatose-6-phosphate ketose/aldose isomerase AgaS K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:ypi00053]
D YpsIP31758_1968 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YpsIP31758_1440 cmtB; mannitol-specific cryptic phosphotransferase enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YpsIP31758_1438 PTS system, lactose/cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D YpsIP31758_1437 putative sugar-specific permease, SgaT/UlaA family K03475 ulaA; ascorbate PTS system EIIC component
D YpsIP31758_3269 putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D YpsIP31758_3262 araD2; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YpsIP31758_1910 araD1; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YpsIP31758_3270 lyxK; cryptic L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
C 00500 Starch and sucrose metabolism [PATH:ypi00500]
D YpsIP31758_3131 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YpsIP31758_0924 glycosyl hydrolase, family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YpsIP31758_2437 putative UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_2438 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_2994 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YpsIP31758_0532 putative periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YpsIP31758_1093 chbA; PTS system, cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YpsIP31758_1091 chbB; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YpsIP31758_1092 chbC; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YpsIP31758_3951 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YpsIP31758_2729 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YpsIP31758_3051 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YpsIP31758_4004 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D YpsIP31758_4003 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D YpsIP31758_4006 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YpsIP31758_4002 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D YpsIP31758_3993 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D YpsIP31758_4005 glgX; glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D YpsIP31758_4138 malS; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D YpsIP31758_3992 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D YpsIP31758_1315 PTS system, glucose-specific EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_0431 treB; pts system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YpsIP31758_0430 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D YpsIP31758_1099 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YpsIP31758_1332 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YpsIP31758_0302 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YpsIP31758_3140 putative manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ypi00520]
D YpsIP31758_0611 glycosyl hydrolase, family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D YpsIP31758_1592 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YpsIP31758_2903 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YpsIP31758_1315 PTS system, glucose-specific EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_2908 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YpsIP31758_1603 nagK; N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D YpsIP31758_2910 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D YpsIP31758_2909 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D YpsIP31758_3140 putative manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YpsIP31758_4173 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YpsIP31758_3600 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D YpsIP31758_4174 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YpsIP31758_1143 glucokinase regulator-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D YpsIP31758_1770 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D YpsIP31758_0454 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YpsIP31758_3872 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YpsIP31758_1295 putative N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D YpsIP31758_1294 putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D YpsIP31758_1293 putative N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D YpsIP31758_0184 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YpsIP31758_0185 UDP-glucose/GDP-mannose dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D YpsIP31758_1727 arnA; bifunctional polymyxin resistance ArnA protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D YpsIP31758_1723 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YpsIP31758_1728 Polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D YpsIP31758_1586 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YpsIP31758_1332 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YpsIP31758_1099 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YpsIP31758_2437 putative UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_2438 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_1968 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YpsIP31758_2857 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YpsIP31758_2856 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YpsIP31758_2855 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YpsIP31758_2368 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YpsIP31758_2369 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component
D YpsIP31758_2370 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D YpsIP31758_0302 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YpsIP31758_1874 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YpsIP31758_3037 manB1; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YpsIP31758_1525 manB2; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YpsIP31758_3039 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YpsIP31758_3041 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YpsIP31758_3040 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YpsIP31758_3051 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YpsIP31758_3050 ddhB; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D YpsIP31758_3049 ddhC; CDP-4-keto-6-deoxy-D-glucose-3-dehydrase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D YpsIP31758_3052 ddhD; CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D YpsIP31758_3048 prt; CDP-paratose synthetase K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D YpsIP31758_4004 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ypi00620]
D YpsIP31758_3835 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YpsIP31758_1803 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YpsIP31758_3363 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YpsIP31758_3362 aceF; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_2589 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YpsIP31758_1963 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YpsIP31758_2473 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YpsIP31758_1443 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YpsIP31758_1442 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YpsIP31758_1749 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YpsIP31758_2024 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YpsIP31758_1029 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YpsIP31758_0392 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YpsIP31758_0391 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YpsIP31758_1422 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YpsIP31758_2530 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D YpsIP31758_1862 aldehyde dehydrogenase (NAD) family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D YpsIP31758_2409 lldD; L-lactate dehydrogenase (cytochrome) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D YpsIP31758_2619 poxB; pyruvate dehydrogenase (cytochrome) K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D YpsIP31758_1808 ldhA; fermentative lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D YpsIP31758_2805 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D YpsIP31758_1760 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D YpsIP31758_1052 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YpsIP31758_2561 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YpsIP31758_4137 tkrA; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YpsIP31758_2463 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YpsIP31758_1277 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D YpsIP31758_3616 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YpsIP31758_3271 fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YpsIP31758_1873 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YpsIP31758_3667 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YpsIP31758_3668 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YpsIP31758_3669 frdC; fumarate reductase, C subunit K00246 frdC; succinate dehydrogenase subunit C
D YpsIP31758_3670 frdD; fumarate reductase, D subunit K00247 frdD; succinate dehydrogenase subunit D
D YpsIP31758_0125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D YpsIP31758_3978 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YpsIP31758_1737 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YpsIP31758_0294 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D YpsIP31758_3405 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ypi00630]
D YpsIP31758_0295 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D YpsIP31758_3835 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YpsIP31758_0294 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D YpsIP31758_3616 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YpsIP31758_2886 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D YpsIP31758_1920 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YpsIP31758_3359 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YpsIP31758_2776 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D YpsIP31758_4137 tkrA; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YpsIP31758_3961 gph2; phosphoglycolate phosphatase, bacterial K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D YpsIP31758_0027 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YpsIP31758_1158 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YpsIP31758_0865 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YpsIP31758_0863 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_0864 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YpsIP31758_4052 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YpsIP31758_1512 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YpsIP31758_2021 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YpsIP31758_4119 fdoG; aerobic formate dehydrogenase, alpha subunit, proteobacterial-type K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YpsIP31758_4118 putative aerobic formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YpsIP31758_4117 fdoI; aerobic formate dehydrogenase, cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D YpsIP31758_1971 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YpsIP31758_2114 hutG; N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:ypi00640]
D YpsIP31758_3835 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YpsIP31758_1443 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YpsIP31758_1442 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_2589 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YpsIP31758_0396 putative quinone oxidoreductase, YhdH/YhfP family protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_1029 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YpsIP31758_0392 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YpsIP31758_0391 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YpsIP31758_1422 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YpsIP31758_1218 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YpsIP31758_2879 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YpsIP31758_2878 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YpsIP31758_2977 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YpsIP31758_3359 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YpsIP31758_2535 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D YpsIP31758_0587 alcohol dehydrogenase, iron-containing K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:ypi00650]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_4159 alcohol dehydrogenase, short-chain family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YpsIP31758_1963 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YpsIP31758_1512 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YpsIP31758_2883 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YpsIP31758_2882 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YpsIP31758_2885 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YpsIP31758_2884 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YpsIP31758_3667 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YpsIP31758_3668 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YpsIP31758_3669 frdC; fumarate reductase, C subunit K00246 frdC; succinate dehydrogenase subunit C
D YpsIP31758_3670 frdD; fumarate reductase, D subunit K00247 frdD; succinate dehydrogenase subunit D
D YpsIP31758_1218 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YpsIP31758_2692 putative succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YpsIP31758_0422 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YpsIP31758_2589 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YpsIP31758_1803 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YpsIP31758_2518 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D YpsIP31758_3401 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_0154 ilvB3; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_1839 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_3400 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YpsIP31758_1838 putative acetolactate synthase I, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YpsIP31758_0155 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ypi00660]
D YpsIP31758_3401 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_0154 ilvB3; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_1839 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_3400 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YpsIP31758_1838 putative acetolactate synthase I, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YpsIP31758_0155 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YpsIP31758_2158 cat2; 4-hydroxybutyrate coenzyme A transferase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D YpsIP31758_2879 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YpsIP31758_2878 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YpsIP31758_2157 MaoC domain protein K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D YpsIP31758_2156 HpcH/HpaI aldolase/citrate lyase family protein K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D YpsIP31758_0093 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D YpsIP31758_3407 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YpsIP31758_3408 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YpsIP31758_3406 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ypi00562]
D YpsIP31758_1165 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YpsIP31758_1622 appA; periplasmic AppA protein K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D YpsIP31758_2974 oxidoreductase, NAD-binding K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YpsIP31758_2968 AP endonuclease, family 2 K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D YpsIP31758_2976 thiamine pyrophosphate-dependent enzyme K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D YpsIP31758_2967 putative myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D YpsIP31758_2969 kinase, pfkB family K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D YpsIP31758_2977 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YpsIP31758_0096 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ypi00190]
D YpsIP31758_1454 nuoA; NADH-quinone oxidoreductase, A subunit K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D YpsIP31758_1455 nuoB; NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D YpsIP31758_1456 nuoCD; NADH-quinone oxidoreductase, C/D subunit K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D YpsIP31758_1458 nuoF; NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D YpsIP31758_1459 nuoG; NADH-quinone oxidoreductase, G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D YpsIP31758_1460 nuoH; NADH-quinone oxidoreductase, H subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D YpsIP31758_1461 nuoI; NADH-quinone oxidoreductase, I subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D YpsIP31758_1462 nuoJ; NADH-quinone oxidoreductase, J subunit K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D YpsIP31758_1463 nuoK; NADH-quinone oxidoreductase, K subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D YpsIP31758_1464 nuoL; NADH-quinone oxidoreductase, L subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D YpsIP31758_1465 nuoM; NADH-quinone oxidoreductase, M subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D YpsIP31758_1466 nuoN; NADH-quinone oxidoreductase, N subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D YpsIP31758_1594 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YpsIP31758_2883 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YpsIP31758_2882 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YpsIP31758_2885 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YpsIP31758_2884 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YpsIP31758_3667 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YpsIP31758_3668 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YpsIP31758_3669 frdC; fumarate reductase, C subunit K00246 frdC; succinate dehydrogenase subunit C
D YpsIP31758_3670 frdD; fumarate reductase, D subunit K00247 frdD; succinate dehydrogenase subunit D
D YpsIP31758_3102 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YpsIP31758_3101 cyoD; cytochrome o ubiquinol oxidase, subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D YpsIP31758_3100 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D YpsIP31758_3099 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D YpsIP31758_3098 cyoA; cytochrome o ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D YpsIP31758_2876 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YpsIP31758_2875 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YpsIP31758_2874 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D YpsIP31758_4178 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YpsIP31758_4176 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YpsIP31758_4177 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YpsIP31758_4179 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YpsIP31758_4175 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YpsIP31758_4182 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YpsIP31758_4180 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YpsIP31758_4181 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YpsIP31758_3622 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D YpsIP31758_1227 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ypi00680]
D YpsIP31758_2473 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YpsIP31758_2474 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D YpsIP31758_4119 fdoG; aerobic formate dehydrogenase, alpha subunit, proteobacterial-type K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YpsIP31758_4118 putative aerobic formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YpsIP31758_4117 fdoI; aerobic formate dehydrogenase, cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D YpsIP31758_3682 fdhF; anaerobic formate dehydrogenase, alpha subunit, archaeal-type K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D YpsIP31758_1158 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YpsIP31758_3316 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YpsIP31758_0125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D YpsIP31758_3616 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YpsIP31758_0850 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YpsIP31758_4026 putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YpsIP31758_3621 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YpsIP31758_0100 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YpsIP31758_0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YpsIP31758_1542 conserved hypothetical protein K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D YpsIP31758_1443 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YpsIP31758_1442 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YpsIP31758_3835 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YpsIP31758_1737 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YpsIP31758_2861 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YpsIP31758_3480 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YpsIP31758_0075 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YpsIP31758_0856 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YpsIP31758_2694 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YpsIP31758_2583 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YpsIP31758_3493 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ypi00910]
D YpsIP31758_1273 napA; periplasmic nitrate reductase, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D YpsIP31758_1274 napB; periplasmic nitrate reductase, diheme cytochrome c subunit NapB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D YpsIP31758_3956 nirB; nitrite reductase [NAD(P)H], large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D YpsIP31758_3957 nirD; nitrite reductase [NAD(P)H], small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D YpsIP31758_2617 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D YpsIP31758_4036 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YpsIP31758_0027 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YpsIP31758_0466 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YpsIP31758_0465 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YpsIP31758_3350 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D YpsIP31758_0950 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ypi00920]
D YpsIP31758_1299 cysP; sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YpsIP31758_0090 sulfate ABC transporter, sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YpsIP31758_1300 cysU; sulfate/thiosulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YpsIP31758_1301 cysW; sulfate/thiosulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YpsIP31758_1302 cysA; sulfate/thiosulfate ABC transporter, ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YpsIP31758_3938 tauA; taurine ABC transporter, periplasmic taurine-binding protein K15551 tauA; taurine transport system substrate-binding protein
D YpsIP31758_3936 tauC; taurine ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D YpsIP31758_3937 tauB; taurine ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YpsIP31758_3935 tauD; alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YpsIP31758_0353 putative ABC transporter, aliphatic sulfonates binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YpsIP31758_0355 putative ABC aliphatic sulfonates transporter, permease subunit K15554 ssuC; sulfonate transport system permease protein
D YpsIP31758_0356 putative ABC aliphatic sulfonates transporter, ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YpsIP31758_0354 ssuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D YpsIP31758_0352 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YpsIP31758_3303 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YpsIP31758_3304 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YpsIP31758_3302 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D YpsIP31758_3630 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YpsIP31758_3309 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D YpsIP31758_3311 sulfite reductase [NADPH] flavoprotein, alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D YpsIP31758_3310 cysI; sulfite reductase (NADPH) hemoprotein, beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D YpsIP31758_2787 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YpsIP31758_3995 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D YpsIP31758_0080 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YpsIP31758_1318 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YpsIP31758_4087 pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YpsIP31758_3082 pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YpsIP31758_0292 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D YpsIP31758_0121 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YpsIP31758_3261 dmsA; anaerobic dimethyl sulfoxide reductase, A subunit K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YpsIP31758_1344 putative anaerobic dimethyl sulfoxide reductase, A subunit K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YpsIP31758_1343 putative anaerobic dimethyl sulfoxide reductase, B subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YpsIP31758_3260 dmsB; anaerobic dimethyl sulfoxide reductase, B subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YpsIP31758_3259 dmsC; anaerobic dimethyl sulfoxide reductase, C subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YpsIP31758_1342 putative anaerobic dimethyl sulfoxide reductase, C subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ypi00061]
D YpsIP31758_1029 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YpsIP31758_0392 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YpsIP31758_0391 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YpsIP31758_1422 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YpsIP31758_1579 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D YpsIP31758_2512 putative acyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YpsIP31758_1577 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YpsIP31758_1576 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YpsIP31758_2108 conserved hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YpsIP31758_1411 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YpsIP31758_2520 beta-ketoacyl synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YpsIP31758_1580 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YpsIP31758_2547 beta-ketoacyl synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YpsIP31758_1578 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YpsIP31758_2519 short-chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YpsIP31758_2546 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D YpsIP31758_2521 thioester dehydratase family protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YpsIP31758_1024 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YpsIP31758_4159 alcohol dehydrogenase, short-chain family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YpsIP31758_3402 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_2014 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ypi00071]
D YpsIP31758_1399 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_0282 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_3171 acyl-coenzyme A dehydrogenase domain protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D YpsIP31758_3402 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_2014 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_0975 aas; 2-acylglycerophosphoethanolamine acyltransferase/acyl-(acyl-carrier-protein) synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D YpsIP31758_2473 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YpsIP31758_1963 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ypi00561]
D YpsIP31758_4052 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YpsIP31758_3286 dihydroxyacetone kinase family protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D YpsIP31758_3285 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D YpsIP31758_0101 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YpsIP31758_3247 carbohydrate kinase, FGGY family K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YpsIP31758_3772 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YpsIP31758_1575 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D YpsIP31758_0557 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YpsIP31758_0582 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YpsIP31758_3771 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YpsIP31758_2395 agaN; alpha-galactosidase AgaN K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:ypi00564]
D YpsIP31758_0079 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D YpsIP31758_4000 glpD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YpsIP31758_0227 glpA; anaerobic glycerol-3-phosphate dehydrogenase, A subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YpsIP31758_0228 glpB; anaerobic glycerol-3-phosphate dehydrogenase, B subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D YpsIP31758_0229 glpC; anaerobic glycerol-3-phosphate dehydrogenase, C subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D YpsIP31758_3772 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YpsIP31758_0557 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YpsIP31758_0582 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YpsIP31758_3771 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YpsIP31758_0217 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D YpsIP31758_0221 pldB; lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D YpsIP31758_0224 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YpsIP31758_0260 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YpsIP31758_0975 aas; 2-acylglycerophosphoethanolamine acyltransferase/acyl-(acyl-carrier-protein) synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D YpsIP31758_4057 putative CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D YpsIP31758_3005 cdsA2; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D YpsIP31758_1019 cdsA1; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D YpsIP31758_3207 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YpsIP31758_3663 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D YpsIP31758_2251 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D YpsIP31758_3113 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D YpsIP31758_1917 PAP2 family protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D YpsIP31758_1144 HAD hydrolase YfhB K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D YpsIP31758_1953 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:ypi00565]
D YpsIP31758_0217 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:ypi00600]
D YpsIP31758_2102 conserved hypothetical protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D YpsIP31758_1629 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YpsIP31758_2395 agaN; alpha-galactosidase AgaN K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YpsIP31758_2903 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D YpsIP31758_0217 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D YpsIP31758_0217 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:ypi00592]
D YpsIP31758_0217 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D YpsIP31758_1399 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_0282 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ypi01040]
D YpsIP31758_3021 GDSL-like lipase/acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YpsIP31758_3076 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YpsIP31758_1945 thioesterase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ypi00230]
D YpsIP31758_0574 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YpsIP31758_3973 nudE; ADP compounds hydrolase nudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D YpsIP31758_3496 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YpsIP31758_1099 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YpsIP31758_2070 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YpsIP31758_1426 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YpsIP31758_3844 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D YpsIP31758_1233 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YpsIP31758_2351 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D YpsIP31758_1147 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D YpsIP31758_1234 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D YpsIP31758_3018 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D YpsIP31758_3017 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D YpsIP31758_1249 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D YpsIP31758_1610 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YpsIP31758_3843 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YpsIP31758_4088 putative phosphoribosyl transferase protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YpsIP31758_3060 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YpsIP31758_3032 ushA; protein ushA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YpsIP31758_3296 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YpsIP31758_2912 nagD; hydrolase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YpsIP31758_3975 HAD hydrolase, IA family K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D YpsIP31758_3035 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D YpsIP31758_2824 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YpsIP31758_3495 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YpsIP31758_3142 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D YpsIP31758_3213 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YpsIP31758_3351 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D YpsIP31758_1194 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YpsIP31758_1182 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YpsIP31758_3483 conserved hypothetical protein TIGR00258 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D YpsIP31758_0826 rdgB; non-canonical purine NTP pyrophosphatase RdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D YpsIP31758_3153 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D YpsIP31758_1196 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YpsIP31758_3373 guaC; guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D YpsIP31758_0041 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D YpsIP31758_2769 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YpsIP31758_1063 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YpsIP31758_1062 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YpsIP31758_2770 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YpsIP31758_3556 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D YpsIP31758_3324 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D YpsIP31758_1449 yfbR; 5'-nucleotidase YfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D YpsIP31758_0039 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YpsIP31758_0177 gppA; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YpsIP31758_1226 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YpsIP31758_3319 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D YpsIP31758_0201 cyaA; adenylate cyclase, class I K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D YpsIP31758_2804 adenylate cyclase, class IV K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D YpsIP31758_1113 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D YpsIP31758_3648 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YpsIP31758_1878 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D YpsIP31758_1846 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D YpsIP31758_1003 putative decarboxylase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D YpsIP31758_3631 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YpsIP31758_3054 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YpsIP31758_3318 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YpsIP31758_0576 Ser/Thr protein phosphatase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D YpsIP31758_3446 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D YpsIP31758_3302 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D YpsIP31758_3303 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YpsIP31758_3304 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YpsIP31758_1058 polysaccharide deacetylase family protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D YpsIP31758_3185 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D YpsIP31758_3186 aminotransferase, class V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D YpsIP31758_1079 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YpsIP31758_1078 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YpsIP31758_1077 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D YpsIP31758_3194 amidohydrolase, AtzE family K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5]
C 00240 Pyrimidine metabolism [PATH:ypi00240]
D YpsIP31758_3453 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YpsIP31758_3454 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YpsIP31758_0436 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YpsIP31758_0435 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D YpsIP31758_1567 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D YpsIP31758_2555 pyrD; dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D YpsIP31758_0057 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D YpsIP31758_1913 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D YpsIP31758_1015 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D YpsIP31758_1182 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YpsIP31758_3318 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YpsIP31758_0401 maf2; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D YpsIP31758_0498 conserved hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D YpsIP31758_3317 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D YpsIP31758_2581 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D YpsIP31758_1977 nudG; CTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D YpsIP31758_2453 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D YpsIP31758_3032 ushA; protein ushA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YpsIP31758_3296 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YpsIP31758_2912 nagD; hydrolase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YpsIP31758_1837 HAD hydrolase, IA family K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D YpsIP31758_0266 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D YpsIP31758_3142 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D YpsIP31758_1235 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D YpsIP31758_3631 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YpsIP31758_1003 putative decarboxylase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D YpsIP31758_2462 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D YpsIP31758_3955 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YpsIP31758_3556 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D YpsIP31758_2452 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D YpsIP31758_2769 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YpsIP31758_1063 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YpsIP31758_1062 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YpsIP31758_2770 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YpsIP31758_1449 yfbR; 5'-nucleotidase YfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D YpsIP31758_1583 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D YpsIP31758_0059 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YpsIP31758_3497 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D YpsIP31758_1964 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D YpsIP31758_0984 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D YpsIP31758_1864 oxidoreductase, short chain dehydrogenase/reductase family protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ypi00250]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YpsIP31758_1128 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YpsIP31758_1983 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YpsIP31758_2586 ansB; L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YpsIP31758_0003 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D YpsIP31758_2913 asnB; asparagine synthase B, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YpsIP31758_3184 hydrolase, carbon-nitrogen family K13566 NIT2; omega-amidase [EC:3.5.1.3]
D YpsIP31758_1450 aminotransferase, class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YpsIP31758_3678 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D YpsIP31758_2408 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YpsIP31758_0129 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YpsIP31758_3648 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YpsIP31758_1610 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YpsIP31758_0436 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YpsIP31758_0435 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D YpsIP31758_1218 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YpsIP31758_2692 putative succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YpsIP31758_0422 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YpsIP31758_0466 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YpsIP31758_0465 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YpsIP31758_4036 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YpsIP31758_2268 putA; bifunctional PutA protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YpsIP31758_0027 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YpsIP31758_3453 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YpsIP31758_3454 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YpsIP31758_2143 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YpsIP31758_0822 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YpsIP31758_4173 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YpsIP31758_1426 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ypi00260]
D YpsIP31758_0301 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YpsIP31758_3476 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YpsIP31758_0122 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YpsIP31758_4013 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YpsIP31758_3475 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D YpsIP31758_3474 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YpsIP31758_2620 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D YpsIP31758_1158 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YpsIP31758_4137 tkrA; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YpsIP31758_4052 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YpsIP31758_2861 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YpsIP31758_3480 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YpsIP31758_0075 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YpsIP31758_0856 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YpsIP31758_2694 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YpsIP31758_2583 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YpsIP31758_3493 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D YpsIP31758_1864 oxidoreductase, short chain dehydrogenase/reductase family protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D YpsIP31758_0071 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D YpsIP31758_0072 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D YpsIP31758_0865 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YpsIP31758_0863 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_0864 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YpsIP31758_3207 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YpsIP31758_2831 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D YpsIP31758_2830 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D YpsIP31758_2355 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YpsIP31758_4146 putative threonine ammonia-lyase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YpsIP31758_0158 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YpsIP31758_1412 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YpsIP31758_1652 alr1; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YpsIP31758_1937 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YpsIP31758_1936 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YpsIP31758_2448 pyridoxal-dependent decarboxylase domain protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:ypi00270]
D YpsIP31758_0080 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YpsIP31758_1318 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YpsIP31758_4087 pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YpsIP31758_3082 pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YpsIP31758_0590 metC1; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_3806 metC2; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_1857 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_1307 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_0298 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YpsIP31758_0264 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YpsIP31758_0841 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YpsIP31758_3355 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YpsIP31758_3354 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YpsIP31758_1546 ypsI; N-acylhomoserine lactone synthase YpsI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YpsIP31758_0719 ytbI; N-acylhomoserine lactone synthase YtbI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YpsIP31758_3325 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D YpsIP31758_3178 mtnK; 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D YpsIP31758_3213 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YpsIP31758_3179 eIF-2B alpha/beta/delta family protein K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D YpsIP31758_3182 class II aldolase/adducin N-terminal domain protein K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D YpsIP31758_3181 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D YpsIP31758_3180 dioxygenase, ARD/ARD' family K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D YpsIP31758_3763 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YpsIP31758_1670 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D YpsIP31758_3233 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D YpsIP31758_0301 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YpsIP31758_3476 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YpsIP31758_0122 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YpsIP31758_4013 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YpsIP31758_0292 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D YpsIP31758_0121 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YpsIP31758_0156 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YpsIP31758_3234 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YpsIP31758_0836 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YpsIP31758_2787 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YpsIP31758_1412 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YpsIP31758_1652 alr1; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YpsIP31758_2275 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YpsIP31758_3616 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YpsIP31758_2355 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YpsIP31758_1303 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D YpsIP31758_0856 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YpsIP31758_2694 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YpsIP31758_2583 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ypi00280]
D YpsIP31758_0156 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_1399 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_0282 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_2977 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YpsIP31758_2518 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ypi00290]
D YpsIP31758_4146 putative threonine ammonia-lyase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YpsIP31758_0158 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YpsIP31758_3407 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YpsIP31758_3408 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YpsIP31758_3406 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D YpsIP31758_3401 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_0154 ilvB3; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_1839 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_3400 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YpsIP31758_1838 putative acetolactate synthase I, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YpsIP31758_0155 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YpsIP31758_0163 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YpsIP31758_0157 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YpsIP31758_0156 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YpsIP31758_4140 aminotransferase, classes I and II K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D YpsIP31758_1450 aminotransferase, class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YpsIP31758_3405 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ypi00300]
D YpsIP31758_0301 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YpsIP31758_3476 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YpsIP31758_0122 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YpsIP31758_4013 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YpsIP31758_1247 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YpsIP31758_3455 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D YpsIP31758_1010 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D YpsIP31758_3947 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YpsIP31758_1255 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YpsIP31758_0205 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YpsIP31758_0973 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YpsIP31758_2148 aminotransferase, class I and II K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D YpsIP31758_3392 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YpsIP31758_3391 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ypi00310]
D YpsIP31758_2880 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_1412 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YpsIP31758_1652 alr1; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YpsIP31758_2692 putative succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YpsIP31758_0422 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YpsIP31758_2575 conserved hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D YpsIP31758_1739 oxidase, FAD binding K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:ypi00220]
D YpsIP31758_3549 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D YpsIP31758_2408 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YpsIP31758_0129 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YpsIP31758_1079 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YpsIP31758_1078 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YpsIP31758_1077 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D YpsIP31758_2143 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YpsIP31758_0822 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YpsIP31758_0027 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YpsIP31758_4036 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YpsIP31758_1450 aminotransferase, class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YpsIP31758_0993 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D YpsIP31758_0128 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D YpsIP31758_0127 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D YpsIP31758_3947 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YpsIP31758_0126 argE; acetylornithine deacetylase (ArgE) K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ypi00330]
D YpsIP31758_3955 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YpsIP31758_2781 adiA; biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D YpsIP31758_0843 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D YpsIP31758_0832 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D YpsIP31758_0833 aguB; N-carbamoylputrescine amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D YpsIP31758_0811 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YpsIP31758_3354 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YpsIP31758_3355 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YpsIP31758_1232 speG; spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D YpsIP31758_2120 astA; arginine N-succinyltransferase, beta subunit K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D YpsIP31758_2118 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D YpsIP31758_2121 argM; succinylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D YpsIP31758_2119 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D YpsIP31758_2117 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D YpsIP31758_0829 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D YpsIP31758_2268 putA; bifunctional PutA protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YpsIP31758_3150 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YpsIP31758_3149 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D YpsIP31758_2344 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ypi00340]
D YpsIP31758_2428 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D YpsIP31758_2435 hisI; histidine biosynthesis bifunctional protein hisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D YpsIP31758_2433 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D YpsIP31758_2432 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D YpsIP31758_2434 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D YpsIP31758_2431 hisB; histidine biosynthesis bifunctional protein HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D YpsIP31758_2430 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YpsIP31758_2429 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D YpsIP31758_4085 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D YpsIP31758_4086 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D YpsIP31758_2113 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D YpsIP31758_2111 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D YpsIP31758_2114 hutG; N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:ypi00350]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YpsIP31758_2430 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YpsIP31758_3763 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YpsIP31758_2788 aromatic amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YpsIP31758_2473 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YpsIP31758_1963 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YpsIP31758_2357 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D YpsIP31758_2356 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D YpsIP31758_2362 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D YpsIP31758_2363 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D YpsIP31758_2361 hpaF; 5-carboxymethyl-2-hydroxymuconate delta isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D YpsIP31758_2364 hpaG2; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D YpsIP31758_2365 hpaG1; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D YpsIP31758_2360 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D YpsIP31758_2359 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D YpsIP31758_2692 putative succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YpsIP31758_0422 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ypi00360]
D YpsIP31758_2788 aromatic amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YpsIP31758_2430 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YpsIP31758_3763 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YpsIP31758_1997 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D YpsIP31758_3254 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:ypi00380]
D YpsIP31758_2880 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_2788 aromatic amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YpsIP31758_2776 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D YpsIP31758_3254 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ypi00400]
D YpsIP31758_2862 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YpsIP31758_3220 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YpsIP31758_1735 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YpsIP31758_3965 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D YpsIP31758_0393 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D YpsIP31758_3877 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D YpsIP31758_3143 aroL; shikimate kinase 2 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YpsIP31758_3966 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YpsIP31758_2582 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D YpsIP31758_1405 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D YpsIP31758_1932 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YpsIP31758_1933 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D YpsIP31758_1934 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D YpsIP31758_1935 trpC; tryptophan biosynthesis protein trpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D YpsIP31758_1937 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YpsIP31758_1936 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YpsIP31758_3219 tyrA; T-protein K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D YpsIP31758_2624 putative chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D YpsIP31758_3218 pheA; P-protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D YpsIP31758_3279 polar amino acid ABC transporter, periplasmic amino acid-binding protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YpsIP31758_2430 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YpsIP31758_3763 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ypi00410]
D YpsIP31758_3345 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D YpsIP31758_1218 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YpsIP31758_3344 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_2977 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ypi00430]
D YpsIP31758_3128 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YpsIP31758_3935 tauD; alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YpsIP31758_1442 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YpsIP31758_1443 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:ypi00440]
D YpsIP31758_3562 phnI; phosphonate metabolism protein PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D YpsIP31758_3560 phnG; phosphonate metabolism protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D YpsIP31758_3561 phnH; phosphonate metabolism protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D YpsIP31758_3565 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D YpsIP31758_3566 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D YpsIP31758_3563 phnJ; phosphonate metabolism protein PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D YpsIP31758_3568 phnP; phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ypi00450]
D YpsIP31758_0121 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YpsIP31758_0590 metC1; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_3806 metC2; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_1857 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_1307 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_0298 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YpsIP31758_0264 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YpsIP31758_1745 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D YpsIP31758_2598 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D YpsIP31758_3303 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YpsIP31758_3304 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YpsIP31758_1980 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D YpsIP31758_4115 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YpsIP31758_2455 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ypi00460]
D YpsIP31758_2994 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YpsIP31758_0532 putative periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YpsIP31758_3128 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YpsIP31758_1983 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YpsIP31758_2586 ansB; L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YpsIP31758_0003 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D YpsIP31758_1158 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ypi00470]
D YpsIP31758_3764 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YpsIP31758_3385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YpsIP31758_1412 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YpsIP31758_1652 alr1; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YpsIP31758_2143 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YpsIP31758_0822 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YpsIP31758_0143 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YpsIP31758_3389 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YpsIP31758_1796 Mandelate racemase/muconate lactonizing enzyme family protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D YpsIP31758_2275 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YpsIP31758_0205 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YpsIP31758_0973 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YpsIP31758_2632 conserved hypothetical protein K23120 cntL; histidine 2-aminobutanoyltransferase [EC:2.5.1.152 2.5.1.-]
D YpsIP31758_2631 conserved hypothetical protein K23122 cntM; staphylopine/pseudopaline/yersinopine synthase [EC:1.5.1.52 1.5.1.-]
D YpsIP31758_1997 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ypi00480]
D YpsIP31758_3128 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YpsIP31758_1117 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D YpsIP31758_1115 conserved hypothetical protein TIGR00370 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D YpsIP31758_1116 biotin-dependent carboxylase uncharacterized domain protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D YpsIP31758_3234 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YpsIP31758_0836 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D YpsIP31758_3543 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YpsIP31758_1175 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D YpsIP31758_2556 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YpsIP31758_3156 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D YpsIP31758_1775 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YpsIP31758_2665 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YpsIP31758_4049 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D YpsIP31758_1615 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YpsIP31758_2436 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YpsIP31758_2022 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YpsIP31758_1721 btuE; vitamin B12 transport periplasmic protein BtuE K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D YpsIP31758_0136 hybrid peroxiredoxin hyPrx5 K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D YpsIP31758_0811 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YpsIP31758_3354 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ypi00511]
D YpsIP31758_1629 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YpsIP31758_2903 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:ypi00540]
D YpsIP31758_1025 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YpsIP31758_3381 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D YpsIP31758_1023 lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D YpsIP31758_3016 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D YpsIP31758_1026 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D YpsIP31758_2576 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D YpsIP31758_0446 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D YpsIP31758_2062 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D YpsIP31758_0445 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D YpsIP31758_2571 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D YpsIP31758_0067 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D YpsIP31758_1556 htrB1; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D YpsIP31758_2025 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D YpsIP31758_2706 PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D YpsIP31758_1764 Alkaline phosphatase family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YpsIP31758_4081 eptB; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YpsIP31758_2380 pagP; antimicrobial peptide resistance/lipid A acylation protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YpsIP31758_1729 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YpsIP31758_0361 htrB2; lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D YpsIP31758_3170 gmhA1; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YpsIP31758_0564 hldE; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YpsIP31758_1044 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D YpsIP31758_0070 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D YpsIP31758_0068 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D YpsIP31758_0069 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D YpsIP31758_3516 putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis [PATH:ypi00542]
D YpsIP31758_0182 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ypi00541]
D YpsIP31758_2437 putative UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_2438 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YpsIP31758_2855 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YpsIP31758_1968 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YpsIP31758_0187 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YpsIP31758_0186 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YpsIP31758_0189 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D YpsIP31758_0188 wecD; TDP-D-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D YpsIP31758_3051 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YpsIP31758_3050 ddhB; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D YpsIP31758_3049 ddhC; CDP-4-keto-6-deoxy-D-glucose-3-dehydrase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D YpsIP31758_3052 ddhD; CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D YpsIP31758_3048 prt; CDP-paratose synthetase K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D YpsIP31758_1874 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YpsIP31758_3037 manB1; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YpsIP31758_1525 manB2; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YpsIP31758_3039 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YpsIP31758_3041 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YpsIP31758_3040 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YpsIP31758_4174 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YpsIP31758_0184 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YpsIP31758_0185 UDP-glucose/GDP-mannose dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:ypi00550]
D YpsIP31758_0454 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YpsIP31758_3872 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YpsIP31758_3386 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YpsIP31758_3389 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YpsIP31758_3392 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YpsIP31758_3385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YpsIP31758_3391 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YpsIP31758_1018 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YpsIP31758_0559 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YpsIP31758_2651 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YpsIP31758_3390 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YpsIP31758_3387 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YpsIP31758_0471 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YpsIP31758_3972 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YpsIP31758_3334 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YpsIP31758_2980 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YpsIP31758_2949 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YpsIP31758_3393 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YpsIP31758_2952 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YpsIP31758_2659 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YpsIP31758_3606 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:ypi00552]
D YpsIP31758_0559 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YpsIP31758_2651 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YpsIP31758_0182 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ypi00543]
D YpsIP31758_0182 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YpsIP31758_0193 glycosyl transferase, WecB/TagA/CpsF family K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D YpsIP31758_0191 wecF; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D YpsIP31758_2129 pgaC; biofilm PGA synthesis N-glycosyltransferase PgaC K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D YpsIP31758_2128 putative biofilm PGA synthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D YpsIP31758_0080 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ypi00730]
D YpsIP31758_3853 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D YpsIP31758_1203 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D YpsIP31758_3855 thiF; adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D YpsIP31758_1168 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_2004 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_3108 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YpsIP31758_3857 thiH; thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D YpsIP31758_3112 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YpsIP31758_3856 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D YpsIP31758_3854 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D YpsIP31758_3114 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D YpsIP31758_3662 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YpsIP31758_1835 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YpsIP31758_1591 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D YpsIP31758_3054 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ypi00740]
D YpsIP31758_1919 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YpsIP31758_B0062 GTP cyclohydrolase II domain protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YpsIP31758_3117 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D YpsIP31758_0208 HAD-superfamily hydrolase, subfamily IA, variant 1 K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D YpsIP31758_0567 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D YpsIP31758_3116 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D YpsIP31758_1751 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D YpsIP31758_3461 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D YpsIP31758_1622 appA; periplasmic AppA protein K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D YpsIP31758_2356 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D YpsIP31758_0281 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D YpsIP31758_0352 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YpsIP31758_0574 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YpsIP31758_1613 hydrolase, NUDIX family K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D YpsIP31758_1427 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ypi00750]
D YpsIP31758_1772 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D YpsIP31758_1774 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D YpsIP31758_0848 epd; D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D YpsIP31758_1418 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D YpsIP31758_2583 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YpsIP31758_3443 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D YpsIP31758_1139 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D YpsIP31758_3474 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ypi00760]
D YpsIP31758_1128 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YpsIP31758_2865 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D YpsIP31758_3369 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D YpsIP31758_2557 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D YpsIP31758_2824 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YpsIP31758_3495 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YpsIP31758_3491 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D YpsIP31758_3032 ushA; protein ushA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YpsIP31758_3296 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YpsIP31758_2912 nagD; hydrolase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YpsIP31758_2929 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D YpsIP31758_3318 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YpsIP31758_3851 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D YpsIP31758_1154 NAD+ synthetase family protein K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D YpsIP31758_3241 competence/damage-inducible protein CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D YpsIP31758_1984 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D YpsIP31758_1604 NAD-dependent deacetylase-like protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D YpsIP31758_2888 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D YpsIP31758_0137 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D YpsIP31758_1830 pntA; NAD(P) transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D YpsIP31758_1831 pntB; NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D YpsIP31758_2692 putative succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YpsIP31758_0422 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ypi00770]
D YpsIP31758_3401 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_0154 ilvB3; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_1839 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YpsIP31758_3400 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YpsIP31758_1838 putative acetolactate synthase I, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YpsIP31758_0155 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YpsIP31758_0163 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YpsIP31758_0157 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YpsIP31758_3343 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D YpsIP31758_3106 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D YpsIP31758_3344 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YpsIP31758_3870 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D YpsIP31758_0060 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D YpsIP31758_3318 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YpsIP31758_0065 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D YpsIP31758_3374 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D YpsIP31758_1140 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D YpsIP31758_3125 acpH; acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D YpsIP31758_0156 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YpsIP31758_3345 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ypi00780]
D YpsIP31758_2842 bioC; biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D YpsIP31758_1411 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YpsIP31758_2520 beta-ketoacyl synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YpsIP31758_1580 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YpsIP31758_2547 beta-ketoacyl synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YpsIP31758_1578 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YpsIP31758_2519 short-chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YpsIP31758_2521 thioester dehydratase family protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YpsIP31758_1024 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YpsIP31758_3988 bioH; carboxylesterase bioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D YpsIP31758_2843 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YpsIP31758_2845 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D YpsIP31758_2841 bioD2; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YpsIP31758_1868 bioD1; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YpsIP31758_2844 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D YpsIP31758_3871 birA; birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YpsIP31758_0974 molybdopterin oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:ypi00785]
D YpsIP31758_2954 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D YpsIP31758_2955 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D YpsIP31758_1733 lipoyltransferase/lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3363 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YpsIP31758_3362 aceF; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YpsIP31758_2881 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D YpsIP31758_2880 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YpsIP31758_0865 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YpsIP31758_0863 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YpsIP31758_0864 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ypi00790]
D YpsIP31758_2470 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D YpsIP31758_1835 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YpsIP31758_2034 putative dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D YpsIP31758_0558 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D YpsIP31758_3341 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D YpsIP31758_3601 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D YpsIP31758_3449 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YpsIP31758_1423 folC; FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D YpsIP31758_1919 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YpsIP31758_B0062 GTP cyclohydrolase II domain protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YpsIP31758_3948 pabA; para-aminobenzoate synthase glutamine amidotransferase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D YpsIP31758_2353 pabB; para-aminobenzoate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D YpsIP31758_1581 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D YpsIP31758_3312 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D YpsIP31758_3313 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D YpsIP31758_3085 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D YpsIP31758_1004 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D YpsIP31758_2836 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YpsIP31758_2835 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YpsIP31758_2833 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D YpsIP31758_3470 putative molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D YpsIP31758_2480 moeA; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D YpsIP31758_0017 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ypi00670]
D YpsIP31758_3449 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YpsIP31758_3012 folD; FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D YpsIP31758_1158 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YpsIP31758_1233 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YpsIP31758_3843 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YpsIP31758_3883 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YpsIP31758_0863 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YpsIP31758_0298 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YpsIP31758_0984 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D YpsIP31758_1971 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YpsIP31758_0123 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YpsIP31758_3796 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YpsIP31758_0857 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ypi00860]
D YpsIP31758_1325 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YpsIP31758_2067 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D YpsIP31758_3330 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YpsIP31758_0278 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YpsIP31758_0198 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D YpsIP31758_0197 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D YpsIP31758_3849 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D YpsIP31758_1280 hemF; coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D YpsIP31758_0024 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D YpsIP31758_0287 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D YpsIP31758_3053 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D YpsIP31758_0196 putative uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D YpsIP31758_3305 cysG2; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YpsIP31758_3959 cysG1; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YpsIP31758_3102 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YpsIP31758_1927 cobO; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D YpsIP31758_3917 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ypi00130]
D YpsIP31758_3774 ubiC; chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D YpsIP31758_3773 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D YpsIP31758_0280 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D YpsIP31758_1427 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D YpsIP31758_0862 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D YpsIP31758_2768 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D YpsIP31758_0861 ubiH; 2-polyprenyl-6-methoxyphenol 4-hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D YpsIP31758_0271 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D YpsIP31758_2914 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D YpsIP31758_1481 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YpsIP31758_1482 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D YpsIP31758_1483 hydrolase, alpha/beta fold family K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D YpsIP31758_1485 menC; o-succinylbenzoic acid (OSB) synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D YpsIP31758_1486 menE; O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D YpsIP31758_1484 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D YpsIP31758_1740 ydiI; esterase YdiI K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D YpsIP31758_0111 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YpsIP31758_2261 wrbA; flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D YpsIP31758_1619 transcriptional regulator, NmrA family K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ypi00900]
D YpsIP31758_3112 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YpsIP31758_1017 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D YpsIP31758_3299 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D YpsIP31758_2069 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D YpsIP31758_3298 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D YpsIP31758_1186 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D YpsIP31758_3457 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D YpsIP31758_2518 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D YpsIP31758_1427 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D YpsIP31758_3111 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D YpsIP31758_3613 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D YpsIP31758_1018 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ypi00907]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_1399 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_0282 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D YpsIP31758_3248 putative transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YpsIP31758_3249 putative transketolase. N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YpsIP31758_0847 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ypi00523]
D YpsIP31758_0187 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YpsIP31758_0186 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ypi01053]
D YpsIP31758_1481 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YpsIP31758_2398 4'-phosphopantetheinyl transferase family protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D YpsIP31758_0684 putative pyochelin synthetase K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D YpsIP31758_0686 thiazolinyl imide reductase family protein K12241 pchG; pyochelin biosynthesis protein PchG
C 01055 Biosynthesis of vancomycin group antibiotics
D YpsIP31758_0186 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ypi00946]
D YpsIP31758_2994 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YpsIP31758_0532 putative periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ypi00332]
D YpsIP31758_3150 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YpsIP31758_3149 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ypi00261]
D YpsIP31758_3303 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YpsIP31758_3304 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YpsIP31758_0301 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YpsIP31758_3476 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YpsIP31758_0122 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YpsIP31758_4013 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YpsIP31758_1247 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YpsIP31758_3455 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ypi00521]
D YpsIP31758_1332 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YpsIP31758_1099 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YpsIP31758_1165 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YpsIP31758_2974 oxidoreductase, NAD-binding K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YpsIP31758_0187 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YpsIP31758_0186 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D YpsIP31758_1332 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ypi00525]
D YpsIP31758_0187 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YpsIP31758_0186 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ypi00401]
D YpsIP31758_3219 tyrA; T-protein K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YpsIP31758_2430 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YpsIP31758_3763 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D YpsIP31758_1932 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YpsIP31758_1933 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D YpsIP31758_2512 putative acyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YpsIP31758_1577 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YpsIP31758_1578 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YpsIP31758_2519 short-chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D YpsIP31758_1579 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ypi00999]
D YpsIP31758_0841 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YpsIP31758_3877 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D YpsIP31758_2994 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YpsIP31758_0532 putative periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:ypi00997]
D YpsIP31758_0711 iucD; aerobactin siderophore biosynthesis protein IucD K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D YpsIP31758_2447 lysine N6-hydroxylase/L-ornithine N5-oxygenase family K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D YpsIP31758_0713 iucB; aerobactin siderophore biosynthesis protein IucB K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D YpsIP31758_0714 iucA; aerobactin siderophore biosynthesis protein IucA K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38]
D YpsIP31758_0712 iucC; aerobactin siderophore biosynthesis protein IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ypi00362]
D YpsIP31758_1399 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_0282 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_4060 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D YpsIP31758_2086 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YpsIP31758_0381 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YpsIP31758_0094 GlcNAc-PI de-N-acetylase family K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D YpsIP31758_0093 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:ypi00627]
D YpsIP31758_2530 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D YpsIP31758_1427 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:ypi00364]
D YpsIP31758_0265 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ypi00625]
D YpsIP31758_2473 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YpsIP31758_1963 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ypi00361]
D YpsIP31758_0265 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:ypi00623]
D YpsIP31758_0265 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D YpsIP31758_4060 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:ypi00633]
D YpsIP31758_1762 oxidoreductase, FAD/FMN-binding K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D YpsIP31758_2819 oxidoreductase, FAD/FMN-binding K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D YpsIP31758_1399 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YpsIP31758_0282 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D YpsIP31758_1079 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YpsIP31758_1078 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YpsIP31758_1077 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:ypi00930]
D YpsIP31758_0283 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YpsIP31758_1400 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D YpsIP31758_4060 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:ypi00626]
D YpsIP31758_2473 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YpsIP31758_1963 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ypi03020]
D YpsIP31758_3860 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YpsIP31758_3859 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YpsIP31758_3890 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YpsIP31758_0040 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ypi03010]
D YpsIP31758_2580 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D YpsIP31758_1013 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YpsIP31758_3909 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YpsIP31758_3891 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YpsIP31758_3897 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YpsIP31758_3639 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YpsIP31758_3920 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YpsIP31758_3900 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YpsIP31758_0461 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YpsIP31758_3916 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YpsIP31758_3892 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D YpsIP31758_3921 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YpsIP31758_3893 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YpsIP31758_3901 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YpsIP31758_3593 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D YpsIP31758_3228 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D YpsIP31758_3906 rpsQ; ribosomal protein s17 K02961 RP-S17; small subunit ribosomal protein S17
D YpsIP31758_3637 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D YpsIP31758_3911 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D YpsIP31758_3462 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D YpsIP31758_0555 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D YpsIP31758_3863 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YpsIP31758_3912 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D YpsIP31758_3915 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YpsIP31758_3914 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YpsIP31758_3902 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YpsIP31758_3899 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D YpsIP31758_3861 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YpsIP31758_3636 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YpsIP31758_3862 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YpsIP31758_3864 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YpsIP31758_0459 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YpsIP31758_3904 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YpsIP31758_3895 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YpsIP31758_3908 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YpsIP31758_3889 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YpsIP31758_3898 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YpsIP31758_3225 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YpsIP31758_1715 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YpsIP31758_3612 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YpsIP31758_3910 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YpsIP31758_3913 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YpsIP31758_3903 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YpsIP31758_2720 rplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D YpsIP31758_3611 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D YpsIP31758_0062 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YpsIP31758_3907 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D YpsIP31758_3896 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D YpsIP31758_0118 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D YpsIP31758_3069 ribosomal protein L31P family K02909 RP-L31; large subunit ribosomal protein L31
D YpsIP31758_1574 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YpsIP31758_0063 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D YpsIP31758_4154 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D YpsIP31758_1714 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D YpsIP31758_3070 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YpsIP31758_4193 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4285 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4189 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4266 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4203 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4215 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4294 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4263 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4291 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4206 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4195 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4283 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4191 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4217 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4192 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4262 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4218 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4196 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4290 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4282 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4208 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ypi00970]
D YpsIP31758_4205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4264 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4292 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4221 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4222 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4261 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4199 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4227 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4268 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4269 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4267 pseudogene K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YpsIP31758_4241 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YpsIP31758_4240 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YpsIP31758_4197 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YpsIP31758_4219 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YpsIP31758_4220 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YpsIP31758_4237 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D YpsIP31758_4257 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YpsIP31758_4258 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YpsIP31758_4260 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YpsIP31758_4190 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YpsIP31758_4194 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YpsIP31758_4216 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YpsIP31758_4284 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YpsIP31758_4287 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4211 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4238 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4278 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4279 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4200 tRNA-His K14226 tRNA-His; tRNA His
D YpsIP31758_4204 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YpsIP31758_4293 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YpsIP31758_4265 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YpsIP31758_4277 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4256 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4201 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4273 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4272 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4274 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4236 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4226 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4253 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4251 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4250 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4252 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4239 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4248 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4246 pseudogene K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4249 pseudogene K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4247 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4255 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4259 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4209 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4212 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4213 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4214 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4276 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4210 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YpsIP31758_4281 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YpsIP31758_4202 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YpsIP31758_4295 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YpsIP31758_4243 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YpsIP31758_4242 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4271 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4233 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4234 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4286 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YpsIP31758_4207 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YpsIP31758_4244 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YpsIP31758_4289 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YpsIP31758_4198 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D YpsIP31758_4231 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YpsIP31758_4232 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YpsIP31758_4288 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YpsIP31758_4223 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4224 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4225 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4228 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4229 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4230 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4296 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D YpsIP31758_1325 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YpsIP31758_2907 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YpsIP31758_3238 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YpsIP31758_2035 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YpsIP31758_2558 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YpsIP31758_4131 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YpsIP31758_4130 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YpsIP31758_1712 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YpsIP31758_2593 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YpsIP31758_4115 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YpsIP31758_3014 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YpsIP31758_2455 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YpsIP31758_3883 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YpsIP31758_3545 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YpsIP31758_2926 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YpsIP31758_3460 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YpsIP31758_0883 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YpsIP31758_2043 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YpsIP31758_1038 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YpsIP31758_1187 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YpsIP31758_1716 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YpsIP31758_1717 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YpsIP31758_1773 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YpsIP31758_3960 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ypi03060]
D YpsIP31758_3894 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D YpsIP31758_3866 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D YpsIP31758_3599 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D YpsIP31758_3121 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YpsIP31758_3120 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YpsIP31758_3122 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D YpsIP31758_4157 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YpsIP31758_3378 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YpsIP31758_0078 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D YpsIP31758_3379 secM; secretion monitor protein SecM K13301 secM; secretion monitor
D YpsIP31758_3230 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YpsIP31758_4322 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D YpsIP31758_0239 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D YpsIP31758_0274 tatA1; twin arginine-targeting protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA
D YpsIP31758_0275 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D YpsIP31758_0276 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D YpsIP31758_2956 tatA2; twin arginine-targeting protein translocase TatA K03425 tatE; sec-independent protein translocase protein TatE
D YpsIP31758_1135 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YpsIP31758_3459 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ypi04122]
D YpsIP31758_1168 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_2004 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_2787 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YpsIP31758_0232 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D YpsIP31758_3922 tusB; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D YpsIP31758_3923 tusC; tRNA 2-thiouridine synthesizing protein C K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D YpsIP31758_3924 tusD; tRNA 2-thiouridine synthesizing sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D YpsIP31758_2529 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D YpsIP31758_1612 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YpsIP31758_2833 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D YpsIP31758_2836 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YpsIP31758_2834 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D YpsIP31758_2481 moeB; molybdopterin synthase sulfurylase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D YpsIP31758_2835 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YpsIP31758_3470 putative molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D YpsIP31758_3108 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YpsIP31758_3855 thiF; adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ypi03018]
D YpsIP31758_0981 nudH; (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D YpsIP31758_1569 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YpsIP31758_0178 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D YpsIP31758_3316 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YpsIP31758_3592 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YpsIP31758_2810 ATP-dependent RNA helicase, DEAD/DEAH box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D YpsIP31758_3646 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YpsIP31758_3590 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YpsIP31758_0218 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YpsIP31758_0180 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D YpsIP31758_0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YpsIP31758_3466 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YpsIP31758_3675 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YpsIP31758_3653 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D YpsIP31758_1227 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YpsIP31758_3340 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ypi03030]
D YpsIP31758_2343 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_2243 conserved hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_1055 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YpsIP31758_1028 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YpsIP31758_3059 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YpsIP31758_1584 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YpsIP31758_2928 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YpsIP31758_3506 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YpsIP31758_3544 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YpsIP31758_4152 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YpsIP31758_3765 dnaB1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YpsIP31758_2244 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YpsIP31758_3747 dnaB2; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YpsIP31758_0554 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YpsIP31758_3760 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_B0126 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_1054 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YpsIP31758_1027 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YpsIP31758_0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YpsIP31758_0042 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_1321 ligA1; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ypi03410]
D YpsIP31758_1901 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YpsIP31758_1121 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YpsIP31758_0819 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YpsIP31758_0064 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YpsIP31758_2288 base excision DNA repair protein, HhH-GPD family K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YpsIP31758_4132 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YpsIP31758_1976 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YpsIP31758_2675 nfo; endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YpsIP31758_0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YpsIP31758_0881 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YpsIP31758_0042 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_1321 ligA1; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ypi03420]
D YpsIP31758_1598 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D YpsIP31758_3761 uvrA; UvrABC system, A protein K03701 uvrA; excinuclease ABC subunit A
D YpsIP31758_2839 uvrB; UvrABC system, B protein K03702 uvrB; excinuclease ABC subunit B
D YpsIP31758_2252 uvrC; UvrABC system, C protein K03703 uvrC; excinuclease ABC subunit C
D YpsIP31758_0209 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YpsIP31758_0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YpsIP31758_0042 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_1321 ligA1; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ypi03430]
D YpsIP31758_3292 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D YpsIP31758_3655 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D YpsIP31758_0980 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D YpsIP31758_0209 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YpsIP31758_2420 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D YpsIP31758_1193 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YpsIP31758_3110 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D YpsIP31758_0881 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YpsIP31758_3760 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_B0126 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_1028 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YpsIP31758_4152 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YpsIP31758_3059 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YpsIP31758_2928 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YpsIP31758_1584 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YpsIP31758_1055 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YpsIP31758_2343 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_2243 conserved hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_3544 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YpsIP31758_3506 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YpsIP31758_0042 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_1321 ligA1; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_3963 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:ypi03440]
D YpsIP31758_0881 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YpsIP31758_3760 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_B0126 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_4151 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D YpsIP31758_1138 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D YpsIP31758_3057 recR; recombination protein RecR K06187 recR; recombination protein RecR
D YpsIP31758_3240 recA; protein RecA K03553 recA; recombination protein RecA
D YpsIP31758_0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YpsIP31758_2031 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D YpsIP31758_2030 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YpsIP31758_2032 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YpsIP31758_0037 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YpsIP31758_0991 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D YpsIP31758_0989 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D YpsIP31758_0992 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YpsIP31758_1028 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YpsIP31758_4152 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YpsIP31758_3059 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YpsIP31758_2928 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YpsIP31758_1584 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YpsIP31758_1055 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YpsIP31758_2343 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_2243 conserved hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_3544 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YpsIP31758_3506 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YpsIP31758_0116 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YpsIP31758_3638 priB; primosomal replication protein n K02686 priB; primosomal replication protein N
D YpsIP31758_3062 priC; primosomal replication protein n'' K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ypi03250]
D YpsIP31758_3950 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ypi02010]
D YpsIP31758_1299 cysP; sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YpsIP31758_0090 sulfate ABC transporter, sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YpsIP31758_1300 cysU; sulfate/thiosulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YpsIP31758_1301 cysW; sulfate/thiosulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YpsIP31758_1302 cysA; sulfate/thiosulfate ABC transporter, ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YpsIP31758_3938 tauA; taurine ABC transporter, periplasmic taurine-binding protein K15551 tauA; taurine transport system substrate-binding protein
D YpsIP31758_3936 tauC; taurine ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D YpsIP31758_3937 tauB; taurine ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YpsIP31758_0353 putative ABC transporter, aliphatic sulfonates binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YpsIP31758_0355 putative ABC aliphatic sulfonates transporter, permease subunit K15554 ssuC; sulfonate transport system permease protein
D YpsIP31758_0356 putative ABC aliphatic sulfonates transporter, ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YpsIP31758_2850 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D YpsIP31758_0091 conserved hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D YpsIP31758_2849 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D YpsIP31758_2848 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YpsIP31758_2853 modF; ABC transporter, ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D YpsIP31758_1350 fbpA; iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D YpsIP31758_1258 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D YpsIP31758_1349 fbpB; iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D YpsIP31758_1259 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D YpsIP31758_1260 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YpsIP31758_1348 fbpC; iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YpsIP31758_3415 thiP; thiamine/thiamine pyrophosphate ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D YpsIP31758_3416 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YpsIP31758_2645 potF; putrescine ABC transporter, periplasmic putrescine binding protein K11073 potF; putrescine transport system substrate-binding protein
D YpsIP31758_2642 potI; putrescine ABC transporter, permease protein K11074 potI; putrescine transport system permease protein
D YpsIP31758_2643 potH; putrescine ABC transporter, permease protein K11075 potH; putrescine transport system permease protein
D YpsIP31758_2644 potG; putrescine ABC transporter, ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D YpsIP31758_1059 proX; glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D YpsIP31758_1060 proW; glycine betaine/L-proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D YpsIP31758_1061 proV; glycine betaine/L-proline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D YpsIP31758_2786 quaternary amine uptake ABC transporter (QAT) family, substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D YpsIP31758_2783 quaternary amine uptake ABC transporter (QAT) family, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D YpsIP31758_2785 quaternary amine uptake ABC transporter (QAT) family, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D YpsIP31758_2784 quaternary amine uptake ABC transporter (QAT) family, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YpsIP31758_0306 malE2; maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YpsIP31758_0305 malF; maltose ABC transporter, permease protein K10109 malF; maltose/maltodextrin transport system permease protein
D YpsIP31758_0304 malG; maltose ABC transporter, permease protein K10110 malG; maltose/maltodextrin transport system permease protein
D YpsIP31758_0308 malK2; maltose ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_1524 carbohydrate uptake (CUT1 family) ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_0913 malK1; maltose/maltodextrin ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_2169 carbohydrate uptake (CUT1 family) ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_0525 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_3572 carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_0914 malE1; maltose/maltodextrin ABC transporter, periplasmic maltose/maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D YpsIP31758_0915 ABC maltose/maltodextrin transporter, permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YpsIP31758_0916 ABC maltose/maltodextrin transporter, permease subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YpsIP31758_1688 togB; oligogalacturonide ABC transporter, periplasmic oligogalacturonide-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D YpsIP31758_1691 togM; oligogalacturonide ABC tansporter, permease protein K10193 togM; oligogalacturonide transport system permease protein
D YpsIP31758_1690 togN; oligogalacturonide ABC tansporter, permease protein K10194 togN; oligogalacturonide transport system permease protein
D YpsIP31758_1689 togA; oligogalacturonide ABC transporter, ATP-binding protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D YpsIP31758_0451 ttg2D; toluene tolerance protein Ttg2D K07323 mlaC; phospholipid transport system substrate-binding protein
D YpsIP31758_0450 mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YpsIP31758_0449 putative ABC transporter, permease protein YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YpsIP31758_0452 putative anti-anti-sigma factor K07122 mlaB; phospholipid transport system transporter-binding protein
D YpsIP31758_0448 putative ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YpsIP31758_0812 sugar ABC transporter, periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_1507 rbsB2; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_4028 rbsB6; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_0814 sugar ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D YpsIP31758_1509 rbsC2; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D YpsIP31758_4029 rbsC7; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D YpsIP31758_0813 sugar ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YpsIP31758_1508 rbsA2; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YpsIP31758_4030 rbsA6; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YpsIP31758_0007 rbsD; cytoplasmic D-ribose-binding protein RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D YpsIP31758_1885 araF; L-arabinose ABC transporter, periplasmic L-arabinose-binding protein K10537 araF; L-arabinose transport system substrate-binding protein
D YpsIP31758_1883 araH; L-arabinose ABC transporter, permease protein K10538 araH; L-arabinose transport system permease protein
D YpsIP31758_1884 araG; L-arabinose ABC transporter, ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D YpsIP31758_0147 putative sugar ABC transporter, periplasmic sugar-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YpsIP31758_0151 putative sugar ABC transporter, permease protein K23509 ytfT; galactofuranose transport system permease protein
D YpsIP31758_0149 putative sugar ABC transporter, permease protein K23509 ytfT; galactofuranose transport system permease protein
D YpsIP31758_0148 putative sugar ABC transporter, periplasmic sugar-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YpsIP31758_2467 mglB; galactose ABC transporter, periplasmic galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YpsIP31758_2465 mglC; galactose ABC transporter, permease protein K10541 mglC; methyl-galactoside transport system permease protein
D YpsIP31758_2466 mglA; galactose ABC transporter, ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D YpsIP31758_4101 xylF; D-xylose-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D YpsIP31758_4099 putative xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein
D YpsIP31758_4100 xylG; D-xylose transport ATP-binding protein xylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YpsIP31758_1853 rbsB3; ribose ABC transporter, periplasmic ribose-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D YpsIP31758_3253 rbsB5; ribose ABC transporter, periplasmic ribose-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D YpsIP31758_1852 rbsC3; ribose ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YpsIP31758_3250 rbsC6; ribose ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YpsIP31758_1851 rbsA3; ribose ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YpsIP31758_3251 rbsA5; ribose ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YpsIP31758_0909 rbsB1; ribose ABC transporter, periplasmic ribose-binding protein K17205 xltC; putative xylitol transport system substrate-binding protein
D YpsIP31758_0911 rbsC1; ribose ABC transporter, permease protein K17206 xltB; putative xylitol transport system permease protein
D YpsIP31758_0912 rbsA1; ribose ABC transporter, ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D YpsIP31758_2973 rbsB4; ribose ABC transporter, periplasmic ribose-binding protein K17208 ibpA; inositol transport system substrate-binding protein
D YpsIP31758_2971 rbsC5; ribose ABC transporter, permease protein K17209 iatP; inositol transport system permease protein
D YpsIP31758_2972 rbsA4; ribose ABC transporter, ATP-binding protein K17210 iatA; inositol transport system ATP-binding protein
D YpsIP31758_0256 ugpB; glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YpsIP31758_0257 ugpA; glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D YpsIP31758_0258 ugpE; glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D YpsIP31758_0259 ugpC; glycerol-3-phosphate ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D YpsIP31758_4171 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D YpsIP31758_3134 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YpsIP31758_4170 pstC2; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D YpsIP31758_1228 pstC1; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D YpsIP31758_4169 pstA1; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D YpsIP31758_1229 pstA2; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D YpsIP31758_4168 pstB1; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YpsIP31758_1230 pstB2; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YpsIP31758_2798 phnD; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D YpsIP31758_2796 phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D YpsIP31758_2797 phnE; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D YpsIP31758_2799 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YpsIP31758_1430 hisM; histidine ABC transporter, permease protein HisM K10015 hisM; histidine transport system permease protein
D YpsIP31758_1429 hisQ; histidine ABC transporter, permease protein HisQ K10016 hisQ; histidine transport system permease protein
D YpsIP31758_1431 hisP; histidine ABC transporter, ATP-binding protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_1428 hisJ; histidine ABC transporter, periplasmic histidine-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D YpsIP31758_1495 glnH; glutamine ABC transporter, periplasmic glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D YpsIP31758_1494 glnP; glutamine ABC transporter, permease protein K10037 glnP; glutamine transport system permease protein
D YpsIP31758_1493 glnQ; glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_2639 artJ; arginine ABC transporter, periplasmic substrate-binding protein ArtJ K09996 artJ; arginine transport system substrate-binding protein
D YpsIP31758_2626 artI; arginine ABC transporter, periplasmic substrate-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D YpsIP31758_2628 artM; arginine ABC transporter, permease protein ArtM K09998 artM; arginine transport system permease protein
D YpsIP31758_2627 artQ; arginine ABC transporter, permease protein ArtQ K09999 artQ; arginine transport system permease protein
D YpsIP31758_2625 artP; arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_2920 gltI; glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YpsIP31758_2922 gltK; glutamate/aspartate ABC transporter, permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D YpsIP31758_2921 gltJ; glutamate/aspartate ABC transporter, permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D YpsIP31758_2923 gltL; glutamate/aspartate ABC transporter, ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_2274 fliY; cystine-binding periplasmic protein FliY K02424 tcyA; L-cystine transport system substrate-binding protein
D YpsIP31758_2273 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D YpsIP31758_2272 amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_0244 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YpsIP31758_0245 livH; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YpsIP31758_0246 livM; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YpsIP31758_0247 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YpsIP31758_0248 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YpsIP31758_1041 metQ; D-methionine ABC transporter, periplasmic D-methionine-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D YpsIP31758_2662 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D YpsIP31758_1042 metI; D-methionine ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D YpsIP31758_2660 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D YpsIP31758_1043 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YpsIP31758_2661 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YpsIP31758_2794 urtA; urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D YpsIP31758_2793 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K11960 urtB; urea transport system permease protein
D YpsIP31758_2792 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K11961 urtC; urea transport system permease protein
D YpsIP31758_2791 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D YpsIP31758_2790 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D YpsIP31758_2840 putative amino acid ABC transporter, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D YpsIP31758_1960 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YpsIP31758_1798 mppA; murein tripeptide ABC transporter, periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YpsIP31758_1959 oppB; oligopeptide ABC transporter, permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D YpsIP31758_1958 oppC; oligopeptide ABC transporter, permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D YpsIP31758_1957 oppD; oligopeptide ABC transporter, ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D YpsIP31758_1956 oppF; oligopeptide ABC transporter, ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D YpsIP31758_4075 dppA; dipeptide ABC transporter, periplasmic dipeptide-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D YpsIP31758_4074 dppB; dipeptide ABC transporter, permease protein DppB K12369 dppB; dipeptide transport system permease protein
D YpsIP31758_4073 dppC; dipeptide ABC transporter, permease protein DppC K12370 dppC; dipeptide transport system permease protein
D YpsIP31758_4072 dppD; dipeptide ABC transporter, ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D YpsIP31758_4071 dppF; dipeptide ABC transporter, ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D YpsIP31758_1784 sapA; peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D YpsIP31758_1783 sapB; peptide ABC transporter, permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D YpsIP31758_1782 sapC; peptide ABC transporter, permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D YpsIP31758_1781 sapD; peptide ABC transporter, ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D YpsIP31758_1780 sapF; peptide ABC transporter, ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D YpsIP31758_2711 ABC transporter, periplamic substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D YpsIP31758_2712 ABC transporter, permease protein K13894 yejB; microcin C transport system permease protein
D YpsIP31758_2713 ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D YpsIP31758_2714 ABC transporter, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D YpsIP31758_0617 ferrienterobactin-binding periplasmic protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D YpsIP31758_2441 fepB; ferric enterobactin ABC transporter, ferric enterobactin-binding periplasmic protein FepB K25286 fagD; iron-siderophore transport system substrate-binding protein
D YpsIP31758_2442 fepD; ferric enterobactin ABC transporter, permease protein FepD K23186 fepD; iron-siderophore transport system permease protein
D YpsIP31758_2443 fepG; ferric enterobactin ABC transporter, permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D YpsIP31758_2444 fepC; ferric enterobactin ABC transporter, ATP-binding protein FepC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YpsIP31758_3332 fhuD; ferrichrome ABC transporter, periplasmic ferrichrome-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YpsIP31758_3331 fhuB; ferrichrome ABC transporter, permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D YpsIP31758_3333 fhuC; ferrichrome ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YpsIP31758_3326 btuF; vitamin B12-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D YpsIP31758_1720 btuC; vitamin B12 import system permease protein BtuC K06073 btuC; vitamin B12 transport system permease protein
D YpsIP31758_1722 btuD; vitamin B12 import ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D YpsIP31758_2027 znuA; high-affinity zinc uptake ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D YpsIP31758_2029 znuB; high-affinity zinc uptake ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D YpsIP31758_2028 znuC; high-affinity zinc uptake ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D YpsIP31758_1705 yfeA; chelated iron ABC transporter, periplasmic iron binding protein YfeA K11604 sitA; manganese/iron transport system substrate-binding protein
D YpsIP31758_1703 yfeC; chelated iron ABC transporter, permease protein YfeC K11605 sitC; manganese/iron transport system permease protein
D YpsIP31758_1702 yfeD; chelated iron ABC transporter, permease protein YfeD K11606 sitD; manganese/iron transport system permease protein
D YpsIP31758_1704 yfeB; chelated iron ABC transporter, ATP-binding protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein
D YpsIP31758_3524 lsrB; autoinducer AI-2 ABC transporter, periplasmic AI-2-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YpsIP31758_3522 lsrC; autoinducer AI-2 ABC transporter, permease protein LsrC K10556 lsrC; AI-2 transport system permease protein
D YpsIP31758_3523 lsrD; autoinducer AI-2 ABC transporter, permease protein LsrD K10557 lsrD; AI-2 transport system permease protein
D YpsIP31758_3521 lsrA; autoinducer AI-2 ABC transporter, ATP binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YpsIP31758_1600 lolC; lipoprotein-releasing system, transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D YpsIP31758_1602 lolE; lipoprotein releasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D YpsIP31758_1601 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D YpsIP31758_1390 ccmD; heme exporter protein D K02196 ccmD; heme exporter protein D
D YpsIP31758_1389 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D YpsIP31758_1388 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D YpsIP31758_1387 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D YpsIP31758_3542 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D YpsIP31758_3541 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D YpsIP31758_0442 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D YpsIP31758_0241 putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D YpsIP31758_0240 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D YpsIP31758_0689 ABC transporter, permease/ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YpsIP31758_0690 ABC transporter, permease/ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YpsIP31758_2577 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D YpsIP31758_3080 mdlA; multidrug ABC transporter, permease protein/ATP-binding protein MdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YpsIP31758_3079 mdlB; multidrug ABC transporter, permease protein/ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YpsIP31758_0105 bacteriocin ABC transporter, ATP-binding/permease protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YpsIP31758_2965 heavy metal ABC transporter (HMT) family, permease protein/ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D YpsIP31758_0132 hasD; type I secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YpsIP31758_2601 cydC; ABC transporter, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YpsIP31758_2600 cydD; ABC transporter, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YpsIP31758_2610 macB; macrolide-specific ABC-type efflux carrier protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YpsIP31758_1311 efflux ABC transporter, ATP-binding/permease protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:ypi02060]
D YpsIP31758_1316 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YpsIP31758_1317 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D YpsIP31758_1315 PTS system, glucose-specific EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_1586 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YpsIP31758_2908 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YpsIP31758_0431 treB; pts system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YpsIP31758_4128 mtlA; PTS system, mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YpsIP31758_1093 chbA; PTS system, cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YpsIP31758_1091 chbB; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YpsIP31758_1092 chbC; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YpsIP31758_2368 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YpsIP31758_2369 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component
D YpsIP31758_2370 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D YpsIP31758_0937 agaF; PTS system, N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_0940 agaV; PTS system, N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2 K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YpsIP31758_0939 agaW; PTS system, N-acetylgalactosamine-specific IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YpsIP31758_0938 agaE; PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YpsIP31758_1440 cmtB; mannitol-specific cryptic phosphotransferase enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YpsIP31758_1438 PTS system, lactose/cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D YpsIP31758_1437 putative sugar-specific permease, SgaT/UlaA family K03475 ulaA; ascorbate PTS system EIIC component
D YpsIP31758_2683 phosphocarrier, HPr family K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D YpsIP31758_2681 fruA; PTS system, fructose-specific EIIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YpsIP31758_2682 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YpsIP31758_0982 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D YpsIP31758_0437 phosphocarrier protein, HPr family K08485 ptsO; phosphocarrier protein NPr
D YpsIP31758_0439 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ypi03070]
D YpsIP31758_0573 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D YpsIP31758_3826 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D YpsIP31758_3830 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D YpsIP31758_3822 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D YpsIP31758_3814 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D YpsIP31758_3813 type III secretion protein, HrpO family K03227 yscS; type III secretion protein S
D YpsIP31758_3812 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D YpsIP31758_3811 type III secretion protein, YscU/HrpY family K03229 yscU; type III secretion protein U
D YpsIP31758_3819 type III secretion protein, HrcV family K03230 yscV; type III secretion protein V
D YpsIP31758_3818 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YpsIP31758_3815 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D YpsIP31758_0953 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D YpsIP31758_0962 putative lipoprotein K02465 gspS; general secretion pathway protein S
D YpsIP31758_0952 general secretion pathway protein C-like protein K02452 gspC; general secretion pathway protein C
D YpsIP31758_0955 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D YpsIP31758_0956 gspG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D YpsIP31758_0957 gspI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D YpsIP31758_0958 gspJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D YpsIP31758_0959 gspK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YpsIP31758_0960 gspL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D YpsIP31758_0954 gspE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YpsIP31758_3731 type IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YpsIP31758_0963 type IV prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YpsIP31758_3121 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YpsIP31758_3120 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YpsIP31758_3866 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D YpsIP31758_3599 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D YpsIP31758_3894 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D YpsIP31758_3122 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D YpsIP31758_4157 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YpsIP31758_3378 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YpsIP31758_3379 secM; secretion monitor protein SecM K13301 secM; secretion monitor
D YpsIP31758_0239 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D YpsIP31758_0078 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D YpsIP31758_3230 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YpsIP31758_0274 tatA1; twin arginine-targeting protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA
D YpsIP31758_0275 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D YpsIP31758_0276 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D YpsIP31758_2956 tatA2; twin arginine-targeting protein translocase TatA K03425 tatE; sec-independent protein translocase protein TatE
D YpsIP31758_2045 haemolysin secretion/activation protein, ShlB/FhaC/HecB family K11017 shlB; hemolysin activation/secretion protein
D YpsIP31758_0300 hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YpsIP31758_0299 shlA; hemolysin K11016 shlA; hemolysin
D YpsIP31758_2044 adhesin/haemagluttinin repeat protein K11016 shlA; hemolysin
D YpsIP31758_2585 putative haemagglutinin/invasin K12342 yadB_C; adhesin YadB/C
D YpsIP31758_2584 hypothetical protein K12342 yadB_C; adhesin YadB/C
D YpsIP31758_A0025 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D YpsIP31758_0696 putative VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_2504 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0785 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_1374 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0339 putative VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0328 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_3429 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0788 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0733 type VI secretion system family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0312 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_1369 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_0731 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_3434 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_2506 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_0782 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_0802 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_0319 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_2487 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_1370 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_3424 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_1373 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_0326 putative lipoprotein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_2495 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_3421 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_0795 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_0321 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_1372 OmpA domain protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_2508 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_0780 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_0729 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_3422 OmpA domain protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_2505 ATPase, AAA family K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_1362 Clp protease-associated protein ClpB K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_0322 clpV2; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_3430 ATPase, AAA family K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_0732 clpV1; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ypi02020]
D YpsIP31758_3135 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YpsIP31758_3136 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D YpsIP31758_1304 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D YpsIP31758_1835 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YpsIP31758_4171 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D YpsIP31758_3134 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YpsIP31758_1607 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YpsIP31758_1608 phoP; transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YpsIP31758_1859 integral membrane protein K07790 pagO; putative membrane protein PagO
D YpsIP31758_3979 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YpsIP31758_3980 ompR; transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D YpsIP31758_2761 porin K09475 ompC; outer membrane pore protein C
D YpsIP31758_2559 ompF; outer membrane protein F K09476 ompF; outer membrane pore protein F
D YpsIP31758_0083 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YpsIP31758_0084 cpxR2; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YpsIP31758_0486 conserved hypothetical protein K25864 mzrA; modulator protein MzrA
D YpsIP31758_1825 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YpsIP31758_1826 rstA; transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D YpsIP31758_3323 degP; protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D YpsIP31758_0876 creC; sensor protein CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YpsIP31758_0875 creB; transcriptional regulatory protein CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D YpsIP31758_1211 baeS; signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YpsIP31758_1210 baeR; transcriptional regulatory protein BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D YpsIP31758_1215 mdtA; multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D YpsIP31758_1214 mdtB; multidrug resistance protein MdtB K07788 mdtB; multidrug efflux pump
D YpsIP31758_1213 mdtC; multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump
D YpsIP31758_1212 mdtD; transporter, major facilitator family K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D YpsIP31758_1268 acrD; acriflavine resistance protein D K18324 acrD; multidrug efflux pump
D YpsIP31758_3608 basS; sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YpsIP31758_3607 basR; transcriptional regulatory protein BasR/PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D YpsIP31758_1723 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YpsIP31758_2085 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YpsIP31758_2084 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YpsIP31758_1634 flhD; flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D YpsIP31758_1635 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D YpsIP31758_0653 flagellin K02406 fliC; flagellin
D YpsIP31758_0654 flagellin K02406 fliC; flagellin
D YpsIP31758_2281 flagellin K02406 fliC; flagellin
D YpsIP31758_2280 fliA1; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YpsIP31758_0660 fliA2; flagellar operon sigma factor, sigma-28 K02405 fliA; RNA polymerase sigma factor FliA
D YpsIP31758_1636 motA1; chemotaxis protein motA K02556 motA; chemotaxis protein MotA
D YpsIP31758_0661 motA2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D YpsIP31758_1103 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YpsIP31758_1102 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YpsIP31758_1108 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D YpsIP31758_1106 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D YpsIP31758_1104 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D YpsIP31758_0469 putative aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YpsIP31758_3478 DNA-binding response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D YpsIP31758_4153 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D YpsIP31758_3222 dcuB; anaerobic C4-dicarboxylate transporter dcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D YpsIP31758_2463 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YpsIP31758_2123 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YpsIP31758_1270 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D YpsIP31758_3667 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YpsIP31758_3668 frdB; fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YpsIP31758_3669 frdC; fumarate reductase, C subunit K00246 frdC; succinate dehydrogenase subunit C
D YpsIP31758_3670 frdD; fumarate reductase, D subunit K00247 frdD; succinate dehydrogenase subunit D
D YpsIP31758_4078 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YpsIP31758_4079 uhpB; sensor histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YpsIP31758_4080 uhpA; transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D YpsIP31758_2402 DNA-binding response regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D YpsIP31758_1040 putative lipoprotein K06080 rcsF; RcsF protein
D YpsIP31758_2765 rcsC; sensor kinase protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YpsIP31758_2763 sensor histidine kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YpsIP31758_2764 rcsB; capsular synthesis regulator component B K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D YpsIP31758_3322 barA; signal transduction histidine-protein kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YpsIP31758_2253 uvrY; response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YpsIP31758_3237 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D YpsIP31758_2161 sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YpsIP31758_2160 DNA-binding response regulator, LuxR family K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YpsIP31758_1666 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1661 spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1665 conserved hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1667 conserved hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_0170 gram-negative pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_1664 pilus assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_1679 gram-negative pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_0169 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1663 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1677 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1365 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_2676 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_2165 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_0602 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D YpsIP31758_0601 type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D YpsIP31758_0600 conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YpsIP31758_0599 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YpsIP31758_0598 type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D YpsIP31758_0597 type II secretion system protein K12511 tadC; tight adherence protein C
D YpsIP31758_1011 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D YpsIP31758_1155 glnB; nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D YpsIP31758_0026 ntrB; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YpsIP31758_0025 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D YpsIP31758_0027 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YpsIP31758_2821 sensory box histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D YpsIP31758_2820 zraR; transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG
D YpsIP31758_2822 conserved hypothetical protein K07803 zraP; zinc resistance-associated protein
D YpsIP31758_4064 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YpsIP31758_0441 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YpsIP31758_1150 Putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YpsIP31758_1152 sigma-54 dependent DNA-binding response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YpsIP31758_4309 tke1 RNA K15841 glmY; small regulatory RNA GlmY
D YpsIP31758_1644 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YpsIP31758_1492 methyl-accepting chemotaxis transducer/sensory box protein K03406 mcp; methyl-accepting chemotaxis protein
D YpsIP31758_2753 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YpsIP31758_1642 tar; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YpsIP31758_0967 tsr; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YpsIP31758_4122 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YpsIP31758_1631 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YpsIP31758_1643 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YpsIP31758_1618 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YpsIP31758_1639 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YpsIP31758_1638 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YpsIP31758_1646 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YpsIP31758_1645 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YpsIP31758_3832 putative sensor histidine kinase/response regulator EsrA K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D YpsIP31758_3833 putative DNA-binding response regulator EsrB K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D YpsIP31758_0629 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D YpsIP31758_2923 gltL; glutamate/aspartate ABC transporter, ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_2922 gltK; glutamate/aspartate ABC transporter, permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D YpsIP31758_2921 gltJ; glutamate/aspartate ABC transporter, permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D YpsIP31758_2920 gltI; glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YpsIP31758_3945 crp; catabolite gene activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YpsIP31758_2143 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YpsIP31758_0822 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YpsIP31758_2876 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YpsIP31758_2875 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YpsIP31758_2874 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D YpsIP31758_1891 toxin ABC transporter, ATP-binding/permease protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YpsIP31758_1890 type I secretion membrane fusion protein, HlyD family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YpsIP31758_1889 type I secretion system ATPase K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YpsIP31758_0573 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D YpsIP31758_0184 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YpsIP31758_0185 UDP-glucose/GDP-mannose dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D YpsIP31758_3511 pemA; pectinesterase A K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D YpsIP31758_2327 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YpsIP31758_0637 putative anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D YpsIP31758_0811 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ypi02024]
D YpsIP31758_3233 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D YpsIP31758_3653 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D YpsIP31758_1932 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YpsIP31758_1933 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D YpsIP31758_2862 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YpsIP31758_3220 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YpsIP31758_1735 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YpsIP31758_1150 Putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YpsIP31758_1152 sigma-54 dependent DNA-binding response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YpsIP31758_1634 flhD; flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D YpsIP31758_1635 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D YpsIP31758_1102 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YpsIP31758_2402 DNA-binding response regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D YpsIP31758_3524 lsrB; autoinducer AI-2 ABC transporter, periplasmic AI-2-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YpsIP31758_3522 lsrC; autoinducer AI-2 ABC transporter, permease protein LsrC K10556 lsrC; AI-2 transport system permease protein
D YpsIP31758_3523 lsrD; autoinducer AI-2 ABC transporter, permease protein LsrD K10557 lsrD; AI-2 transport system permease protein
D YpsIP31758_3521 lsrA; autoinducer AI-2 ABC transporter, ATP binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YpsIP31758_3518 carbohydrate kinase, FGGY family K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D YpsIP31758_3519 sugar-binding transcriptional regulatory, Crp/Fnr family K11531 lsrR; lsr operon transcriptional repressor
D YpsIP31758_3525 deoC/fbaB aldolase family protein K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D YpsIP31758_3526 antibiotic biosynthesis monooxygenase domain protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D YpsIP31758_A0047 conjugal transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D YpsIP31758_A0048 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D YpsIP31758_A0049 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D YpsIP31758_A0050 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D YpsIP31758_A0055 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D YpsIP31758_A0056 conjugal transfer protein TrbL/VirB6 K07344 trbL; type IV secretion system protein TrbL
D YpsIP31758_A0051 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D YpsIP31758_A0052 conjugal transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D YpsIP31758_A0053 conjugal transfer protein TrbH K20267 trbH; type IV secretion system protein TrbH
D YpsIP31758_A0054 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D YpsIP31758_1480 rhiA; protein RhiA K20268 rhiA; rhizosphere induced protein
D YpsIP31758_1219 potD; spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YpsIP31758_2059 putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YpsIP31758_2058 putative spermidine/putrescine ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YpsIP31758_1221 potB; spermidine/putrescine ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YpsIP31758_2057 putative spermidine/putrescine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YpsIP31758_1220 potC; spermidine/putrescine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YpsIP31758_1216 potA; spermidine/putrescine ABC transporter, ATP-binding subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YpsIP31758_2056 putative spermidine/putrescine ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YpsIP31758_0244 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YpsIP31758_0245 livH; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YpsIP31758_0246 livM; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YpsIP31758_0247 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YpsIP31758_0248 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YpsIP31758_1546 ypsI; N-acylhomoserine lactone synthase YpsI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YpsIP31758_0719 ytbI; N-acylhomoserine lactone synthase YtbI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YpsIP31758_1547 transcriptional regulator, LuxR family K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YpsIP31758_0720 transcriptional regulator, LuxR family K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YpsIP31758_4066 periplasmic pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D YpsIP31758_3402 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_2014 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_3945 crp; catabolite gene activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YpsIP31758_3769 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D YpsIP31758_1919 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YpsIP31758_B0062 GTP cyclohydrolase II domain protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YpsIP31758_B0063 conserved domain protein K20332 toxC; toxoflavin biosynthesis protein ToxC
D YpsIP31758_B0064 conserved hypothetical protein K20333 toxD; toxoflavin biosynthesis protein ToxD
D YpsIP31758_3117 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D YpsIP31758_3584 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system
D YpsIP31758_1960 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YpsIP31758_1798 mppA; murein tripeptide ABC transporter, periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YpsIP31758_1959 oppB; oligopeptide ABC transporter, permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D YpsIP31758_1958 oppC; oligopeptide ABC transporter, permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D YpsIP31758_1957 oppD; oligopeptide ABC transporter, ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D YpsIP31758_1956 oppF; oligopeptide ABC transporter, ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D YpsIP31758_3551 ABC dipeptide/oligopeptide/nickel transporter, periplasmic dipeptide/oligopeptide/nickel-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YpsIP31758_1071 yntA; nickel ABC transporter, periplasmic nickel-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YpsIP31758_3552 ABC dipeptide/oligopeptide/nickel transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YpsIP31758_1072 yntB; nickel ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YpsIP31758_3553 ABC dipeptide/oligopeptide/nickel transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YpsIP31758_1073 yntC; nickel ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YpsIP31758_3554 ABC dipeptide/oligopeptide/nickel transporter, ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YpsIP31758_1074 yntD; nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YpsIP31758_3555 ABC dipeptide/oligopeptide/nickel transporter, ATP binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YpsIP31758_1075 yntE; nickel ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YpsIP31758_4157 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YpsIP31758_3866 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D YpsIP31758_3599 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D YpsIP31758_3894 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D YpsIP31758_3122 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D YpsIP31758_3378 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YpsIP31758_0239 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D YpsIP31758_0078 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D YpsIP31758_3230 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ypi02030]
D YpsIP31758_1492 methyl-accepting chemotaxis transducer/sensory box protein K03406 mcp; methyl-accepting chemotaxis protein
D YpsIP31758_2753 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YpsIP31758_1642 tar; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YpsIP31758_0967 tsr; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YpsIP31758_4122 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YpsIP31758_1631 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YpsIP31758_1643 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YpsIP31758_1618 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YpsIP31758_0306 malE2; maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YpsIP31758_0812 sugar ABC transporter, periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_1507 rbsB2; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_4028 rbsB6; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_2467 mglB; galactose ABC transporter, periplasmic galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YpsIP31758_4075 dppA; dipeptide ABC transporter, periplasmic dipeptide-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D YpsIP31758_1638 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YpsIP31758_1639 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YpsIP31758_1646 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YpsIP31758_1647 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D YpsIP31758_1645 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YpsIP31758_1644 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YpsIP31758_2291 fliG1; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YpsIP31758_0632 fliG2; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YpsIP31758_2299 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YpsIP31758_0628 lateral flagellar export/assembly protein K02416 fliM; flagellar motor switch protein FliM
D YpsIP31758_2300 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YpsIP31758_0627 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YpsIP31758_1636 motA1; chemotaxis protein motA K02556 motA; chemotaxis protein MotA
D YpsIP31758_0661 motA2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D YpsIP31758_1637 motB1; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YpsIP31758_0662 motB2; flagellar motor protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ypi02040]
D YpsIP31758_2289 fliE1; flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE
D YpsIP31758_0630 fliE2; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D YpsIP31758_0631 fliF2; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D YpsIP31758_2290 fliF1; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D YpsIP31758_2291 fliG1; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YpsIP31758_0632 fliG2; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YpsIP31758_2292 fliH2; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YpsIP31758_0633 fliH1; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YpsIP31758_2293 fliI1; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YpsIP31758_0634 fliI2; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YpsIP31758_2294 fliJ1; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D YpsIP31758_2295 fliK1; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D YpsIP31758_0658 fliK2; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D YpsIP31758_2298 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D YpsIP31758_0659 putative flagellar protein K02415 fliL; flagellar protein FliL
D YpsIP31758_2299 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YpsIP31758_0628 lateral flagellar export/assembly protein K02416 fliM; flagellar motor switch protein FliM
D YpsIP31758_2300 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YpsIP31758_0627 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YpsIP31758_2301 fliO; flagellar protein fliO K02418 fliO; flagellar protein FliO/FliZ
D YpsIP31758_2302 fliP2; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YpsIP31758_0626 fliP1; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YpsIP31758_2303 fliQ1; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YpsIP31758_0625 fliQ2; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YpsIP31758_2304 fliR1; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YpsIP31758_0624 fliR2; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YpsIP31758_2332 flhE; flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D YpsIP31758_2333 flhA1; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YpsIP31758_0622 flhA2; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YpsIP31758_2334 flhB1; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YpsIP31758_0623 flhB2; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YpsIP31758_2325 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YpsIP31758_0638 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YpsIP31758_2324 flgB2; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D YpsIP31758_0639 flgB1; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D YpsIP31758_2323 flgC1; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D YpsIP31758_0640 flgC2; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D YpsIP31758_2322 flgD1; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YpsIP31758_0641 flgD2; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YpsIP31758_2321 flgE1; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D YpsIP31758_0642 flgE2; flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D YpsIP31758_2320 flgF2; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YpsIP31758_0643 flgF1; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YpsIP31758_2319 flgG2; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YpsIP31758_0644 flgG1; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YpsIP31758_2318 flgH1; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D YpsIP31758_0645 flgH2; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D YpsIP31758_2317 flgI2; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D YpsIP31758_0646 flgI1; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D YpsIP31758_2316 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D YpsIP31758_0647 putative lateral flagellar peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D YpsIP31758_2314 flgK1; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D YpsIP31758_0648 flgK2; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D YpsIP31758_2313 flgL1; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D YpsIP31758_0649 flgL2; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D YpsIP31758_0653 flagellin K02406 fliC; flagellin
D YpsIP31758_0654 flagellin K02406 fliC; flagellin
D YpsIP31758_2281 flagellin K02406 fliC; flagellin
D YpsIP31758_2283 fliD2; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D YpsIP31758_0655 fliD1; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D YpsIP31758_2284 fliS2; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YpsIP31758_0656 fliS1; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YpsIP31758_2285 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D YpsIP31758_1636 motA1; chemotaxis protein motA K02556 motA; chemotaxis protein MotA
D YpsIP31758_0661 motA2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D YpsIP31758_1637 motB1; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YpsIP31758_0662 motB2; flagellar motor protein B K02557 motB; chemotaxis protein MotB
D YpsIP31758_2327 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YpsIP31758_0637 putative anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D YpsIP31758_2328 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YpsIP31758_0636 putative flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YpsIP31758_2274 fliY; cystine-binding periplasmic protein FliY K02424 tcyA; L-cystine transport system substrate-binding protein
D YpsIP31758_2278 fliZ; protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D YpsIP31758_0553 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YpsIP31758_1634 flhD; flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D YpsIP31758_1635 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D YpsIP31758_0441 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YpsIP31758_0629 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D YpsIP31758_2280 fliA1; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YpsIP31758_0660 fliA2; flagellar operon sigma factor, sigma-28 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D YpsIP31758_3316 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D YpsIP31758_0298 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
D YpsIP31758_0608 putative invasin K13735 yeeJ; adhesin/invasin
D YpsIP31758_4008 putative invasin K13735 yeeJ; adhesin/invasin
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D YpsIP31758_0608 putative invasin K13735 yeeJ; adhesin/invasin
D YpsIP31758_4008 putative invasin K13735 yeeJ; adhesin/invasin
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ypi01501]
D YpsIP31758_2559 ompF; outer membrane protein F K09476 ompF; outer membrane pore protein F
D YpsIP31758_2761 porin K09475 ompC; outer membrane pore protein C
D YpsIP31758_3096 permease, AmpG family K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D YpsIP31758_1592 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YpsIP31758_1960 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YpsIP31758_1798 mppA; murein tripeptide ABC transporter, periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YpsIP31758_1959 oppB; oligopeptide ABC transporter, permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D YpsIP31758_1958 oppC; oligopeptide ABC transporter, permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D YpsIP31758_1957 oppD; oligopeptide ABC transporter, ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D YpsIP31758_1956 oppF; oligopeptide ABC transporter, ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D YpsIP31758_3586 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_3067 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_3068 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D YpsIP31758_3585 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D YpsIP31758_0668 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D YpsIP31758_3584 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system
D YpsIP31758_0573 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D YpsIP31758_3972 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YpsIP31758_2949 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YpsIP31758_3393 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ypi01502]
D YpsIP31758_3385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YpsIP31758_3764 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YpsIP31758_3391 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YpsIP31758_3390 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YpsIP31758_3387 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ypi01503]
D YpsIP31758_1607 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YpsIP31758_1608 phoP; transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YpsIP31758_4081 eptB; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YpsIP31758_2380 pagP; antimicrobial peptide resistance/lipid A acylation protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YpsIP31758_1723 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YpsIP31758_1727 arnA; bifunctional polymyxin resistance ArnA protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D YpsIP31758_1728 Polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D YpsIP31758_1729 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YpsIP31758_1730 multidrug resistance protein, SMR family K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D YpsIP31758_1731 conserved hypothetical protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D YpsIP31758_3608 basS; sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YpsIP31758_3607 basR; transcriptional regulatory protein BasR/PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D YpsIP31758_1764 Alkaline phosphatase family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YpsIP31758_1784 sapA; peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D YpsIP31758_1783 sapB; peptide ABC transporter, permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D YpsIP31758_1782 sapC; peptide ABC transporter, permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D YpsIP31758_1781 sapD; peptide ABC transporter, ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D YpsIP31758_1780 sapF; peptide ABC transporter, ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D YpsIP31758_4037 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D YpsIP31758_1037 cutF; copper homeostasis protein CutF K06079 cutF; copper homeostasis protein (lipoprotein)
D YpsIP31758_0083 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YpsIP31758_0084 cpxR2; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YpsIP31758_0994 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_3656 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_1747 ErfK/YbiS/YcfS/YnhG family protein K19236 ycfS; L,D-transpeptidase YcfS
D YpsIP31758_3323 degP; protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D YpsIP31758_0020 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YpsIP31758_3950 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YpsIP31758_3586 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_3067 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_3068 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D YpsIP31758_3585 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D YpsIP31758_0668 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D YpsIP31758_0573 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D YpsIP31758_1025 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ypi01000]
C 01001 Protein kinases [BR:ypi01001]
D YpsIP31758_2390 RIO1 family protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YpsIP31758_3135 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YpsIP31758_1607 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YpsIP31758_3979 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YpsIP31758_1825 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YpsIP31758_0083 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YpsIP31758_0876 creC; sensor protein CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YpsIP31758_1211 baeS; signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YpsIP31758_3608 basS; sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YpsIP31758_2085 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YpsIP31758_1103 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YpsIP31758_0469 putative aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YpsIP31758_1314 sensor histidine kinase CpxA K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YpsIP31758_2123 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YpsIP31758_4079 uhpB; sensor histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YpsIP31758_2763 sensor histidine kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YpsIP31758_2765 rcsC; sensor kinase protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YpsIP31758_3322 barA; signal transduction histidine-protein kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YpsIP31758_2161 sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YpsIP31758_4007 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YpsIP31758_0026 ntrB; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YpsIP31758_2821 sensory box histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D YpsIP31758_1150 Putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YpsIP31758_1638 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YpsIP31758_3832 putative sensor histidine kinase/response regulator EsrA K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
C 01009 Protein phosphatases and associated proteins [BR:ypi01009]
D YpsIP31758_0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YpsIP31758_3055 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YpsIP31758_3493 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ypi01002]
D YpsIP31758_3459 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D YpsIP31758_0963 type IV prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YpsIP31758_0603 type IV prepilin peptidase family K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YpsIP31758_1120 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D YpsIP31758_1196 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YpsIP31758_0105 bacteriocin ABC transporter, ATP-binding/permease protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YpsIP31758_2707 lipoprotein, NlpC/P60 family K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D YpsIP31758_1757 lipoprotein, NlpC/P60 family K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D YpsIP31758_1732 lipoprotein, NlpC/P60 family K13695 nlpC; probable lipoprotein NlpC
D YpsIP31758_1426 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YpsIP31758_0466 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YpsIP31758_4173 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YpsIP31758_2913 asnB; asparagine synthase B, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YpsIP31758_3107 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D YpsIP31758_1747 ErfK/YbiS/YcfS/YnhG family protein K19236 ycfS; L,D-transpeptidase YcfS
D YpsIP31758_2563 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D YpsIP31758_0721 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D YpsIP31758_2854 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D YpsIP31758_A0016 surface exclusion protien K07052 K07052; CAAX protease family protein
D YpsIP31758_2556 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YpsIP31758_4047 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D YpsIP31758_4037 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D YpsIP31758_0412 peptidase M15 family K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D YpsIP31758_0990 ptrA; protease III K01407 ptrA; protease III [EC:3.4.24.55]
D YpsIP31758_4063 peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D YpsIP31758_3543 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YpsIP31758_1175 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D YpsIP31758_1255 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YpsIP31758_1605 pepT2; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D YpsIP31758_0680 pepT1; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D YpsIP31758_3156 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D YpsIP31758_3185 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D YpsIP31758_2026 peptidase, M23 family K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D YpsIP31758_3273 map2; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YpsIP31758_1012 map1; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YpsIP31758_0284 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D YpsIP31758_0860 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D YpsIP31758_1824 putative thermostable carboxypeptidase I K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D YpsIP31758_3602 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YpsIP31758_1674 peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D YpsIP31758_0845 peptidase, M48 family K07387 K07387; metalloprotease [EC:3.4.24.-]
D YpsIP31758_1239 peptidase, M48 family K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D YpsIP31758_1020 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D YpsIP31758_1406 peptidoglycan amidase MepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D YpsIP31758_2392 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D YpsIP31758_1818 putative protease K04775 ydgD; protease YdgD [EC:3.4.21.-]
D YpsIP31758_3323 degP; protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D YpsIP31758_0456 degQ; protease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D YpsIP31758_0455 degS; periplasmic serine peptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D YpsIP31758_2346 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D YpsIP31758_2952 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YpsIP31758_2659 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YpsIP31758_2806 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D YpsIP31758_2758 putative penicillin-binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D YpsIP31758_3606 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YpsIP31758_3092 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D YpsIP31758_3090 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D YpsIP31758_2545 conserved hypothetical protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D YpsIP31758_3770 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YpsIP31758_B0052 mutagenesis and repair protein MucA K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D YpsIP31758_1135 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YpsIP31758_2344 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YpsIP31758_1672 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D YpsIP31758_1982 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D YpsIP31758_1925 peptidase, S49 family K04774 sohB; serine protease SohB [EC:3.4.21.-]
D YpsIP31758_3996 peptidase, S54 (rhomboid) family protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D YpsIP31758_0113 hslV; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D YpsIP31758_3128 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YpsIP31758_1208 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D YpsIP31758_3583 peptidase, U32 family K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D YpsIP31758_3582 peptidase, U32 family K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D YpsIP31758_0426 pmbA; pmbA protein K03592 pmbA; PmbA protein
D YpsIP31758_0405 tldD; TldD protein K03568 tldD; TldD protein
D YpsIP31758_2772 eco; ecotin K08276 eco; ecotin
D YpsIP31758_2979 alpha-2-macroglobulin family domain protein K06894 yfhM; alpha-2-macroglobulin
D YpsIP31758_3650 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D YpsIP31758_3651 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ypi01003]
D YpsIP31758_2102 conserved hypothetical protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D YpsIP31758_4003 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D YpsIP31758_0471 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YpsIP31758_2980 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YpsIP31758_3334 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YpsIP31758_3972 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YpsIP31758_0193 glycosyl transferase, WecB/TagA/CpsF family K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D YpsIP31758_0191 wecF; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D YpsIP31758_0182 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YpsIP31758_1553 mdoH; glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D YpsIP31758_2129 pgaC; biofilm PGA synthesis N-glycosyltransferase PgaC K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ypi01005]
D YpsIP31758_1025 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YpsIP31758_1026 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D YpsIP31758_3381 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D YpsIP31758_1023 lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D YpsIP31758_3016 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D YpsIP31758_2576 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D YpsIP31758_1556 htrB1; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D YpsIP31758_2025 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D YpsIP31758_0361 htrB2; lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D YpsIP31758_2706 PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D YpsIP31758_0067 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D YpsIP31758_1729 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YpsIP31758_2380 pagP; antimicrobial peptide resistance/lipid A acylation protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YpsIP31758_1764 Alkaline phosphatase family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YpsIP31758_4081 eptB; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YpsIP31758_2062 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D YpsIP31758_2571 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D YpsIP31758_0445 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D YpsIP31758_0446 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D YpsIP31758_0068 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D YpsIP31758_0066 glycosyl transferase, group 2 family protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D YpsIP31758_0069 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D YpsIP31758_3516 putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D YpsIP31758_3170 gmhA1; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YpsIP31758_1044 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D YpsIP31758_0564 hldE; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YpsIP31758_0070 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D YpsIP31758_3045 glycosyl transferase, group 2 family protein K24673 wbyI; glycosyltransferase [EC:2.4.1.-]
D YpsIP31758_3044 putative mannosyltransferase WbyJ K13000 wbyJ; mannosyltransferase [EC:2.4.1.-]
D YpsIP31758_3042 glycosyl transferase WbyK, group 1 family protein K13001 wbyK; mannosyltransferase [EC:2.4.1.-]
D YpsIP31758_3038 glycosyl transferase, group 2 family protein K13002 wbyL; glycosyltransferase [EC:2.4.1.-]
D YpsIP31758_0192 ECA biosynthesis protein WzyE K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D YpsIP31758_0182 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ypi01011]
D YpsIP31758_0454 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YpsIP31758_3872 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YpsIP31758_3386 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YpsIP31758_3389 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YpsIP31758_3392 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YpsIP31758_3385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YpsIP31758_3764 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YpsIP31758_0143 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YpsIP31758_3390 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YpsIP31758_3387 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YpsIP31758_0559 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YpsIP31758_2651 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YpsIP31758_2046 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D YpsIP31758_3972 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YpsIP31758_3334 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YpsIP31758_2980 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YpsIP31758_2949 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YpsIP31758_3393 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YpsIP31758_2952 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YpsIP31758_2659 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YpsIP31758_3606 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YpsIP31758_2758 putative penicillin-binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D YpsIP31758_2806 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D YpsIP31758_0471 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YpsIP31758_1747 ErfK/YbiS/YcfS/YnhG family protein K19236 ycfS; L,D-transpeptidase YcfS
D YpsIP31758_2563 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D YpsIP31758_1406 peptidoglycan amidase MepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D YpsIP31758_1757 lipoprotein, NlpC/P60 family K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D YpsIP31758_2707 lipoprotein, NlpC/P60 family K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D YpsIP31758_2026 peptidase, M23 family K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D YpsIP31758_0412 peptidase M15 family K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D YpsIP31758_3484 putative soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D YpsIP31758_0995 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D YpsIP31758_1351 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D YpsIP31758_2008 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D YpsIP31758_0817 putative membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D YpsIP31758_1051 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D YpsIP31758_1706 transglycosylase slt family protein K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D YpsIP31758_1146 bacterial extracellular solute-binding protein/transglycosylase SLT domain K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D YpsIP31758_1582 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D YpsIP31758_2951 rare lipoprotein A/sporulation and cell division repeat protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D YpsIP31758_0994 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_3656 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_1684 N-acetylmuramoyl-L-alanine amidase, family 2 K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_3368 ampD; N-acetyl-anhydromuramyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_1748 lpp; major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:ypi01004]
D YpsIP31758_2512 putative acyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YpsIP31758_1577 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YpsIP31758_1576 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YpsIP31758_2108 conserved hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YpsIP31758_1411 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YpsIP31758_2520 beta-ketoacyl synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YpsIP31758_1580 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YpsIP31758_2547 beta-ketoacyl synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YpsIP31758_1578 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YpsIP31758_2519 short-chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YpsIP31758_2546 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D YpsIP31758_2521 thioester dehydratase family protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YpsIP31758_1024 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YpsIP31758_4159 alcohol dehydrogenase, short-chain family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YpsIP31758_3021 GDSL-like lipase/acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YpsIP31758_3076 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YpsIP31758_1945 thioesterase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D YpsIP31758_3086 thioesterase family protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D YpsIP31758_3835 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YpsIP31758_3402 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_2014 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_3772 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YpsIP31758_1575 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D YpsIP31758_0557 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YpsIP31758_0582 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ypi01008]
D YpsIP31758_2398 4'-phosphopantetheinyl transferase family protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D YpsIP31758_0684 putative pyochelin synthetase K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D YpsIP31758_0686 thiazolinyl imide reductase family protein K12241 pchG; pyochelin biosynthesis protein PchG
C 01006 Prenyltransferases [BR:ypi01006]
D YpsIP31758_3111 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D YpsIP31758_3613 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D YpsIP31758_1018 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YpsIP31758_3654 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YpsIP31758_0111 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YpsIP31758_3773 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D YpsIP31758_3102 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ypi01007]
D YpsIP31758_1325 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YpsIP31758_2907 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YpsIP31758_3339 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D YpsIP31758_1773 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YpsIP31758_3960 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YpsIP31758_3014 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YpsIP31758_2043 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YpsIP31758_2455 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YpsIP31758_3460 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YpsIP31758_3545 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YpsIP31758_2926 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YpsIP31758_0883 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YpsIP31758_2035 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YpsIP31758_2558 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YpsIP31758_1187 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YpsIP31758_4131 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YpsIP31758_4130 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YpsIP31758_2593 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YpsIP31758_1038 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YpsIP31758_1712 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YpsIP31758_3238 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YpsIP31758_1716 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YpsIP31758_1717 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YpsIP31758_2560 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YpsIP31758_4140 aminotransferase, classes I and II K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D YpsIP31758_1450 aminotransferase, class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YpsIP31758_1334 aminotransferase, classes I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D YpsIP31758_3763 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YpsIP31758_3183 aminotransferase, class I and II K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D YpsIP31758_2430 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YpsIP31758_0071 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D YpsIP31758_2843 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YpsIP31758_1857 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_1307 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YpsIP31758_3947 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YpsIP31758_2121 argM; succinylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D YpsIP31758_1218 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YpsIP31758_2845 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D YpsIP31758_3330 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YpsIP31758_0156 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YpsIP31758_2583 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YpsIP31758_3186 aminotransferase, class V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D YpsIP31758_1723 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YpsIP31758_0189 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ypi00194]
D YpsIP31758_4175 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YpsIP31758_4176 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YpsIP31758_4177 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YpsIP31758_4178 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YpsIP31758_4179 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YpsIP31758_4180 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YpsIP31758_4181 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YpsIP31758_4182 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YpsIP31758_4183 atpI; ATP synthase F0, I subunit K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ypi03000]
D YpsIP31758_1882 araC; arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D YpsIP31758_3753 rhaR; transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D YpsIP31758_3754 rhaS; transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D YpsIP31758_1094 chbR; transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D YpsIP31758_3481 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D YpsIP31758_0082 ada; ada regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D YpsIP31758_0999 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D YpsIP31758_0162 ilvY; transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D YpsIP31758_0262 metR; transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D YpsIP31758_3463 nhaR; transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D YpsIP31758_0138 oxyR; hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D YpsIP31758_0854 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YpsIP31758_3403 substrate-binding transcriptional regulator, LysR family K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D YpsIP31758_1922 cysB; cys regulon transcriptional activator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D YpsIP31758_1511 substrate-binding transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D YpsIP31758_0095 substrate-binding transcriptional regulator, LysR family K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D YpsIP31758_0418 aaeR; transcriptional activator AaeR K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D YpsIP31758_0150 substrate-binding transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D YpsIP31758_2653 transcriptional regulator, DeoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D YpsIP31758_3997 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D YpsIP31758_0943 agaR; transcriptional repressor AgaR K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D YpsIP31758_3264 transcriptional regulator, DeoR family K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D YpsIP31758_0922 sugar-binding transcriptional regulator, LacI family K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D YpsIP31758_0707 sugar-binding transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YpsIP31758_0972 galR; transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YpsIP31758_0527 sugar-binding transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YpsIP31758_1510 sugar-binding transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YpsIP31758_2393 sugar-binding transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YpsIP31758_1855 sugar-binding transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YpsIP31758_4098 xylR; xylose operon regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YpsIP31758_0115 cytR; transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D YpsIP31758_3399 D-fructose-responsive transcription factor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D YpsIP31758_0432 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D YpsIP31758_1755 purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D YpsIP31758_4022 sugar-binding transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D YpsIP31758_1473 idnR; L-idonate regulatory protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D YpsIP31758_3559 phnF; phosphonates metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D YpsIP31758_2112 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D YpsIP31758_2176 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D YpsIP31758_1999 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D YpsIP31758_3364 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YpsIP31758_2703 uxuR; uxu operon transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D YpsIP31758_0489 transcriptional regulator, GntR family K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D YpsIP31758_1217 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YpsIP31758_2829 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D YpsIP31758_3066 acrR; transcriptional regulator AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D YpsIP31758_0058 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D YpsIP31758_1763 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YpsIP31758_0139 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D YpsIP31758_2811 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D YpsIP31758_0002 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D YpsIP31758_2597 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YpsIP31758_1625 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YpsIP31758_3081 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D YpsIP31758_1547 transcriptional regulator, LuxR family K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YpsIP31758_0720 transcriptional regulator, LuxR family K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YpsIP31758_3994 malT; transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D YpsIP31758_1767 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D YpsIP31758_3200 mprA; transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D YpsIP31758_3026 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YpsIP31758_3888 zntR; Zn(II)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D YpsIP31758_2902 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D YpsIP31758_3769 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D YpsIP31758_0297 iclR; acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D YpsIP31758_1683 transcriptional regulator, IclR family, C-terminal domain protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D YpsIP31758_3945 crp; catabolite gene activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YpsIP31758_1833 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D YpsIP31758_1167 iscR; iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D YpsIP31758_3647 nsrR; nitrite-sensitive repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D YpsIP31758_3281 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D YpsIP31758_2023 putative transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D YpsIP31758_3871 birA; birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YpsIP31758_0385 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YpsIP31758_3482 trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D YpsIP31758_2981 Sugar fermentation stimulation protein B K07724 ner; Ner family transcriptional regulator
D YpsIP31758_3615 sfsB; Sugar fermentation stimulation protein B K07724 ner; Ner family transcriptional regulator
D YpsIP31758_3411 sgrR; sugar transport-related sRNA K11925 sgrR; SgrR family transcriptional regulator
D YpsIP31758_3491 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D YpsIP31758_0889 putative transcriptional regulator K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D YpsIP31758_1863 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D YpsIP31758_4050 putative carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator
D YpsIP31758_2852 modE; transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D YpsIP31758_0120 metJ; Met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D YpsIP31758_2268 putA; bifunctional PutA protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YpsIP31758_2226 addiction module antitoxin, RelB/DinJ family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D YpsIP31758_3094 bolA; bolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D YpsIP31758_A0037 transcription repressor protein KorB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YpsIP31758_0771 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YpsIP31758_0279 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D YpsIP31758_A0058 transcriptional activator K05785 rfaH; transcriptional antiterminator RfaH
D YpsIP31758_3617 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D YpsIP31758_2911 nagC; N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor
D YpsIP31758_1869 mlc; Mlc protein K15545 mlc; transcriptional regulator of PTS gene
D YpsIP31758_4126 mtlR; mannitol operon repressor K02562 mtlR; mannitol operon repressor
D YpsIP31758_1794 tyrR; transcriptional regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D YpsIP31758_1246 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D YpsIP31758_1785 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D YpsIP31758_1788 pspC; phage shock protein C K03973 pspC; phage shock protein C
D YpsIP31758_3519 sugar-binding transcriptional regulatory, Crp/Fnr family K11531 lsrR; lsr operon transcriptional repressor
D YpsIP31758_0429 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D YpsIP31758_0893 AlpA family protein K07733 alpA; prophage regulatory protein
D YpsIP31758_0052 AlpA family protein K07733 alpA; prophage regulatory protein
D YpsIP31758_0763 AlpA family protein K07733 alpA; prophage regulatory protein
D YpsIP31758_0835 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D YpsIP31758_3338 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D YpsIP31758_3118 nrdR; transcriptional regulator, NrdR family K07738 nrdR; transcriptional repressor NrdR
D YpsIP31758_3151 crl; transcriptional activator Crl K11926 crl; sigma factor-binding protein Crl
D YpsIP31758_2247 conserved hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D YpsIP31758_3396 mraZ; mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ypi03021]
D YpsIP31758_3890 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YpsIP31758_3860 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YpsIP31758_3859 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YpsIP31758_0040 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D YpsIP31758_0553 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YpsIP31758_3293 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D YpsIP31758_1129 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YpsIP31758_0242 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D YpsIP31758_0441 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YpsIP31758_2280 fliA1; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YpsIP31758_0660 fliA2; flagellar operon sigma factor, sigma-28 K02405 fliA; RNA polymerase sigma factor FliA
D YpsIP31758_3419 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D YpsIP31758_3597 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D YpsIP31758_3115 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D YpsIP31758_3865 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D YpsIP31758_0462 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D YpsIP31758_0463 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D YpsIP31758_1130 rseA; sigma E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D YpsIP31758_1131 rseB; sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D YpsIP31758_1132 rseC; sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D YpsIP31758_3338 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D YpsIP31758_3605 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D YpsIP31758_3981 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D YpsIP31758_0180 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D YpsIP31758_1033 Rof protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:ypi03019]
D YpsIP31758_1569 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YpsIP31758_0402 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D YpsIP31758_1136 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YpsIP31758_3646 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YpsIP31758_3661 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YpsIP31758_0178 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D YpsIP31758_2810 ATP-dependent RNA helicase, DEAD/DEAH box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D YpsIP31758_3590 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YpsIP31758_0218 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YpsIP31758_3316 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YpsIP31758_3592 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YpsIP31758_0180 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D YpsIP31758_0089 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YpsIP31758_3466 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YpsIP31758_3675 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YpsIP31758_3653 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D YpsIP31758_1227 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YpsIP31758_3340 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D YpsIP31758_0981 nudH; (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D YpsIP31758_3237 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D YpsIP31758_0397 putative diguanylate cyclase/cyclic diguanylate phosphodiesterase protein K18765 csrD; RNase E specificity factor CsrD
D YpsIP31758_0110 rraA; regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D YpsIP31758_3548 conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D YpsIP31758_0438 P-loop ATPase protein family K06958 rapZ; RNase adapter protein RapZ
D YpsIP31758_1815 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D YpsIP31758_3335 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
D YpsIP31758_4321 sroB; sroB RNA K18503 chiX; small regulatory RNA ChiX
D YpsIP31758_4301 SraH RNA K18504 arcZ; small regulatory RNA ArcZ
D YpsIP31758_4309 tke1 RNA K15841 glmY; small regulatory RNA GlmY
D YpsIP31758_4329 RyhB RNA K18507 ryhB; small regulatory RNA RyhB
D YpsIP31758_4313 RyhB RNA K18507 ryhB; small regulatory RNA RyhB
D YpsIP31758_4317 rybB; rybB RNA K18508 rybB; small regulatory RNA RybB
D YpsIP31758_4323 sraD; sraD RNA K18511 micA; small regulatory RNA MicA
D YpsIP31758_4307 CsrB/RsmB RNA family K18515 csrB; small regulatory RNA CsrB
D YpsIP31758_4298 CsrC RNA family K18516 csrC; small regulatory RNA CsrC
D YpsIP31758_4312 rprA; rprA RNA K18518 rprA; small regulatory RNA RprA
D YpsIP31758_4311 RyeE RNA K18520 cyaR; small regulatory RNA CyaR
D YpsIP31758_4306 gcvB; gcvB RNA K18521 gcvB; small regulatory RNA GcvB
D YpsIP31758_4305 sraE/rygA/rygB family RNA K18522 omrA; small regulatory RNA OmrA
D YpsIP31758_4297 spf; Spot 42 RNA K18527 spf; small regulatory RNA Spot 42
C 03041 Spliceosome
C 03011 Ribosome [BR:ypi03011]
D YpsIP31758_2580 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D YpsIP31758_1013 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YpsIP31758_3909 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YpsIP31758_3891 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YpsIP31758_3897 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YpsIP31758_3639 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YpsIP31758_3920 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YpsIP31758_3900 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YpsIP31758_0461 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YpsIP31758_3916 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YpsIP31758_3892 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D YpsIP31758_3921 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YpsIP31758_3893 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YpsIP31758_3901 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YpsIP31758_3593 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D YpsIP31758_3228 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D YpsIP31758_3906 rpsQ; ribosomal protein s17 K02961 RP-S17; small subunit ribosomal protein S17
D YpsIP31758_3637 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D YpsIP31758_3911 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D YpsIP31758_3462 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D YpsIP31758_0555 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D YpsIP31758_3863 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YpsIP31758_3912 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D YpsIP31758_3915 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YpsIP31758_3914 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YpsIP31758_3902 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YpsIP31758_3899 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D YpsIP31758_3636 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YpsIP31758_3862 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YpsIP31758_3864 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YpsIP31758_3861 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YpsIP31758_0459 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YpsIP31758_3904 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YpsIP31758_3895 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YpsIP31758_3908 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YpsIP31758_3889 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YpsIP31758_3898 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YpsIP31758_3225 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YpsIP31758_1715 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YpsIP31758_3612 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YpsIP31758_3910 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YpsIP31758_3913 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YpsIP31758_3903 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YpsIP31758_3611 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D YpsIP31758_0062 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YpsIP31758_3907 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D YpsIP31758_3896 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D YpsIP31758_0118 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D YpsIP31758_3069 ribosomal protein L31P family K02909 RP-L31; large subunit ribosomal protein L31
D YpsIP31758_1574 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YpsIP31758_0063 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D YpsIP31758_4154 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D YpsIP31758_1714 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D YpsIP31758_3070 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YpsIP31758_2720 rplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D YpsIP31758_4192 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4262 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4218 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4196 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4290 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4282 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4208 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4193 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4285 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4189 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4266 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4203 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4215 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4294 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4263 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4291 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4206 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4195 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4283 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4191 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4217 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ypi03009]
D YpsIP31758_1136 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YpsIP31758_2390 RIO1 family protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YpsIP31758_3661 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YpsIP31758_1137 era; GTP-binding protein Era K03595 era; GTPase
D YpsIP31758_3609 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D YpsIP31758_3338 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D YpsIP31758_3597 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D YpsIP31758_3115 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D YpsIP31758_3865 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D YpsIP31758_2718 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D YpsIP31758_3444 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D YpsIP31758_3884 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D YpsIP31758_3507 methyltransferase family protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D YpsIP31758_0238 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D YpsIP31758_0837 rsmE; ribosomal small subunit methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D YpsIP31758_4184 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YpsIP31758_3395 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D YpsIP31758_0476 putative tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D YpsIP31758_4038 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D YpsIP31758_2376 rrmA; ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D YpsIP31758_3644 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D YpsIP31758_3603 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D YpsIP31758_1491 conserved hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D YpsIP31758_0500 methyltransferase family protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D YpsIP31758_2948 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D YpsIP31758_2531 PUA domain protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D YpsIP31758_4048 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D YpsIP31758_2552 putative methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D YpsIP31758_1001 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D YpsIP31758_1183 radical SAM domain protein, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D YpsIP31758_2640 rumB; 23S rRNA (uracil-5-)-methyltransferase RumB K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D YpsIP31758_3439 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YpsIP31758_1928 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D YpsIP31758_1570 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D YpsIP31758_3214 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D YpsIP31758_1614 rluE; ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D YpsIP31758_2990 RNA pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D YpsIP31758_3203 RNA methyltransferase, TrmH family K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D YpsIP31758_3505 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D YpsIP31758_2049 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D YpsIP31758_3227 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D YpsIP31758_2587 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D YpsIP31758_0388 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D YpsIP31758_1404 methyltransferase, HemK family K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D YpsIP31758_2988 cupin family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D YpsIP31758_1606 cupin family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D YpsIP31758_1569 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YpsIP31758_0402 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D YpsIP31758_0834 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D YpsIP31758_2350 dbpA; ATP-independent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D YpsIP31758_3590 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YpsIP31758_1126 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D YpsIP31758_3662 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YpsIP31758_1190 GTP-binding protein EngA K03977 engA; GTPase
D YpsIP31758_3652 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D YpsIP31758_3878 rimN; ribosomal modification protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YpsIP31758_0039 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YpsIP31758_3595 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D YpsIP31758_3598 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D YpsIP31758_3013 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D YpsIP31758_2947 iojap-related protein K09710 ybeB; ribosome-associated protein
D YpsIP31758_2917 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D YpsIP31758_3604 conserved hypothetical protein TIGR00253 K07574 yhbY; RNA-binding protein
D YpsIP31758_4125 conserved hypothetical protein K14762 yibL; ribosome-associated protein
D YpsIP31758_0425 conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D YpsIP31758_0440 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D YpsIP31758_3216 ribosomal subunit interface protein K05809 raiA; ribosome-associated inhibitor A
D YpsIP31758_2075 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D YpsIP31758_1573 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ypi03016]
D YpsIP31758_0560 cca; multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D YpsIP31758_1325 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YpsIP31758_1038 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YpsIP31758_3460 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YpsIP31758_2926 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YpsIP31758_2455 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YpsIP31758_2907 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YpsIP31758_2043 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YpsIP31758_0883 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YpsIP31758_2035 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YpsIP31758_3238 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YpsIP31758_2558 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YpsIP31758_1712 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YpsIP31758_2593 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YpsIP31758_3014 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YpsIP31758_3545 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YpsIP31758_1187 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YpsIP31758_1716 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YpsIP31758_1717 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YpsIP31758_1773 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YpsIP31758_3960 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YpsIP31758_0031 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D YpsIP31758_1588 hinT; histidine triad nucleotide-binding protein HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YpsIP31758_0820 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D YpsIP31758_1039 conserved hypothetical protein TIGR00104 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D YpsIP31758_1420 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D YpsIP31758_3594 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D YpsIP31758_3297 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D YpsIP31758_1168 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_2004 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_3878 rimN; ribosomal modification protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YpsIP31758_3654 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YpsIP31758_4158 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D YpsIP31758_4186 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D YpsIP31758_1980 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D YpsIP31758_3630 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YpsIP31758_4155 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D YpsIP31758_4302 RNase P class A K01978 rnpB; M1 RNA
D YpsIP31758_1759 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D YpsIP31758_0056 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D YpsIP31758_1904 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D YpsIP31758_2013 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D YpsIP31758_3336 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D YpsIP31758_3489 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D YpsIP31758_4131 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YpsIP31758_4130 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YpsIP31758_3339 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D YpsIP31758_3029 ybaK; ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D YpsIP31758_1145 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D YpsIP31758_3768 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D YpsIP31758_0386 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D YpsIP31758_2808 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D YpsIP31758_2915 miaB; tRNA-I(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D YpsIP31758_2038 putative methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D YpsIP31758_2039 putative methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D YpsIP31758_2568 S-adenosylmethionine-dependent methyltransferase SmtA-like protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D YpsIP31758_0141 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D YpsIP31758_3226 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D YpsIP31758_3203 RNA methyltransferase, TrmH family K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D YpsIP31758_0038 trmH; tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D YpsIP31758_1166 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D YpsIP31758_0081 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D YpsIP31758_1127 methyltransferase family protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D YpsIP31758_1007 tRNA pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D YpsIP31758_3439 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YpsIP31758_1612 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YpsIP31758_1802 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D YpsIP31758_0232 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D YpsIP31758_3922 tusB; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D YpsIP31758_3923 tusC; tRNA 2-thiouridine synthesizing protein C K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D YpsIP31758_3924 tusD; tRNA 2-thiouridine synthesizing sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D YpsIP31758_2529 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D YpsIP31758_1170 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D YpsIP31758_0872 putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D YpsIP31758_1410 FAD dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D YpsIP31758_3124 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D YpsIP31758_3085 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D YpsIP31758_3312 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D YpsIP31758_3313 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D YpsIP31758_1004 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D YpsIP31758_3660 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D YpsIP31758_3123 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D YpsIP31758_3108 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YpsIP31758_1031 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D YpsIP31758_1252 acetyltransferase, GNAT family K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D YpsIP31758_2016 peptidase family M22, nonpeptidase-like protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D YpsIP31758_0556 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D YpsIP31758_3657 conserved hypothetical protein TIGR00150 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D YpsIP31758_0996 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D YpsIP31758_3646 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YpsIP31758_3592 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ypi03012]
D YpsIP31758_1912 yciH protein K03113 EIF1; translation initiation factor 1
D YpsIP31758_3596 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D YpsIP31758_1713 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D YpsIP31758_3932 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D YpsIP31758_1014 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D YpsIP31758_3867 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D YpsIP31758_3918 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D YpsIP31758_3919 fusA; translation elongation factor G K02355 fusA; elongation factor G
D YpsIP31758_4114 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D YpsIP31758_2066 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D YpsIP31758_1016 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D YpsIP31758_2065 methyltransferase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D YpsIP31758_2074 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D YpsIP31758_2604 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D YpsIP31758_2698 Elongation factor P-like protein K02356 efp; elongation factor P
D YpsIP31758_3672 efp; translation elongation factor P K02356 efp; elongation factor P
D YpsIP31758_3665 genX; lysyl-tRNA synthetase-like protein K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D YpsIP31758_3673 iron-sulfur cluster-binding protein, KamA family K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D YpsIP31758_1408 conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D YpsIP31758_0882 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D YpsIP31758_3504 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D YpsIP31758_3887 conserved hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D YpsIP31758_1036 peptidyl-tRNA hydrolase domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ypi03110]
D YpsIP31758_2606 clpA; ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D YpsIP31758_3212 clpB; chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D YpsIP31758_3091 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D YpsIP31758_0112 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D YpsIP31758_3055 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YpsIP31758_3466 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YpsIP31758_1172 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D YpsIP31758_1223 putative chaperone protein K04046 yegD; hypothetical chaperone protein
D YpsIP31758_3675 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YpsIP31758_3465 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YpsIP31758_3440 djlA; dnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D YpsIP31758_1171 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D YpsIP31758_3977 hslO; chaperonin HslO K04083 hslO; molecular chaperone Hsp33
D YpsIP31758_2887 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D YpsIP31758_4143 ibpA; small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA
D YpsIP31758_4142 ibpB; small heat shock protein IbpB K04081 ibpB; molecular chaperone IbpB
D YpsIP31758_3976 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D YpsIP31758_3676 groS; chaperonin GroS K04078 groES; chaperonin GroES
D YpsIP31758_3323 degP; protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D YpsIP31758_3602 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YpsIP31758_4182 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YpsIP31758_0170 gram-negative pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_1664 pilus assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_1679 gram-negative pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_0078 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D YpsIP31758_0085 conserved hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D YpsIP31758_2822 conserved hypothetical protein K07803 zraP; zinc resistance-associated protein
D YpsIP31758_1086 conserved hypothetical protein K19778 hdeB; acid stress chaperone HdeB
D YpsIP31758_3258 putative twin-argninine leader-binding DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D YpsIP31758_1341 cytoplasmic chaperone, TorD family K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D YpsIP31758_2903 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YpsIP31758_3950 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YpsIP31758_3015 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D YpsIP31758_3088 peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D YpsIP31758_3926 peptidyl-prolyl cis-trans isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D YpsIP31758_3633 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D YpsIP31758_3458 peptidyl-prolyl cis-trans isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D YpsIP31758_3928 slyD; peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D YpsIP31758_0173 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D YpsIP31758_3442 surA; chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D YpsIP31758_0179 trx; thioredoxin K03671 TXN; thioredoxin
D YpsIP31758_3204 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D YpsIP31758_3023 putative thioredoxin K05838 ybbN; putative thioredoxin
D YpsIP31758_2648 grxA; glutaredoxin GrxA K03674 grxA; glutaredoxin 1
D YpsIP31758_0077 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D YpsIP31758_1758 grxD; monothiol glutaredoxin GrxD K07390 grxD; monothiol glutaredoxin
D YpsIP31758_0020 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YpsIP31758_2001 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D YpsIP31758_0880 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D YpsIP31758_3681 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D YpsIP31758_1393 dsbE; thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ypi04131]
D YpsIP31758_1182 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YpsIP31758_1987 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YpsIP31758_2861 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YpsIP31758_1749 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YpsIP31758_2024 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YpsIP31758_3055 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:ypi04121]
C 03051 Proteasome [BR:ypi03051]
D YpsIP31758_3055 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ypi03032]
D YpsIP31758_1054 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YpsIP31758_3846 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YpsIP31758_3089 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YpsIP31758_1718 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D YpsIP31758_2579 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D YpsIP31758_4153 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D YpsIP31758_3765 dnaB1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YpsIP31758_2244 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YpsIP31758_3747 dnaB2; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YpsIP31758_0554 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YpsIP31758_3760 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_B0126 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_1028 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YpsIP31758_4152 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YpsIP31758_3544 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YpsIP31758_2928 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YpsIP31758_1584 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YpsIP31758_1055 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YpsIP31758_3059 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YpsIP31758_3506 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YpsIP31758_2343 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_2243 conserved hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_1027 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YpsIP31758_0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YpsIP31758_0042 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_1321 ligA1; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_1872 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D YpsIP31758_3963 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YpsIP31758_1098 seqA; protein SeqA K03645 seqA; negative modulator of initiation of replication
D YpsIP31758_1237 hda; DnaA-like protein K10763 hda; DnaA-homolog protein
D YpsIP31758_2767 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YpsIP31758_4150 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YpsIP31758_0581 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YpsIP31758_0578 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YpsIP31758_1923 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YpsIP31758_B0031 putative DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YpsIP31758_1979 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D YpsIP31758_A0023 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D YpsIP31758_B0033 putative DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ypi03036]
D YpsIP31758_1136 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YpsIP31758_B0003 helicase. putatve K26273 SBNO; protein strawberry notch
D YpsIP31758_1966 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D YpsIP31758_B0123 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D YpsIP31758_3846 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YpsIP31758_3089 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YpsIP31758_1718 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D YpsIP31758_2579 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D YpsIP31758_3481 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D YpsIP31758_4153 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D YpsIP31758_0473 gmhA2; phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D YpsIP31758_2532 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D YpsIP31758_1497 ferritin family protein K04047 dps; starvation-inducible DNA-binding protein
D YpsIP31758_0385 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YpsIP31758_3653 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D YpsIP31758_0854 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YpsIP31758_2597 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YpsIP31758_1625 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YpsIP31758_2721 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D YpsIP31758_2565 mukB; chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D YpsIP31758_2566 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D YpsIP31758_2567 mukF; chromosome partition protein mukF K03633 mukF; chromosome partition protein MukF
D YpsIP31758_3383 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D YpsIP31758_3300 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D YpsIP31758_0240 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D YpsIP31758_3393 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YpsIP31758_2596 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YpsIP31758_3394 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D YpsIP31758_0114 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN
D YpsIP31758_3384 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D YpsIP31758_3388 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D YpsIP31758_0241 putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D YpsIP31758_3382 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YpsIP31758_1320 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D YpsIP31758_0858 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D YpsIP31758_0103 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D YpsIP31758_2554 conserved hypothetical protein K18657 zapC; cell division protein ZapC
D YpsIP31758_3375 conserved hypothetical protein K18778 zapD; cell division protein ZapD
D YpsIP31758_0458 ATPase, AFG1 family protein K06916 zapE; cell division protein ZapE
D YpsIP31758_3634 opacity-associated protein A family K07269 ytfB; cell division protein YtfB
D YpsIP31758_0994 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_3656 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_3586 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_3067 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_2010 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D YpsIP31758_2011 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D YpsIP31758_2012 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D YpsIP31758_2540 sulA; cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA
D YpsIP31758_0058 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D YpsIP31758_1098 seqA; protein SeqA K03645 seqA; negative modulator of initiation of replication
D YpsIP31758_0398 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YpsIP31758_0399 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D YpsIP31758_0400 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D YpsIP31758_2950 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D YpsIP31758_A0038 plasmid partition protein K03496 parA; chromosome partitioning protein
D YpsIP31758_B0108 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D YpsIP31758_A0037 transcription repressor protein KorB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YpsIP31758_0771 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YpsIP31758_0581 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YpsIP31758_0578 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YpsIP31758_4186 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D YpsIP31758_4184 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YpsIP31758_0207 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D YpsIP31758_0879 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D YpsIP31758_2454 putative ATPase Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YpsIP31758_0548 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D YpsIP31758_0022 putative GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ypi03400]
D YpsIP31758_1834 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D YpsIP31758_1112 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D YpsIP31758_1121 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YpsIP31758_0819 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YpsIP31758_1901 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YpsIP31758_3377 mutT; mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YpsIP31758_0059 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YpsIP31758_0082 ada; ada regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D YpsIP31758_2288 base excision DNA repair protein, HhH-GPD family K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YpsIP31758_4132 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YpsIP31758_0064 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YpsIP31758_1976 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YpsIP31758_2675 nfo; endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YpsIP31758_3848 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D YpsIP31758_0881 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YpsIP31758_0042 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_1321 ligA1; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YpsIP31758_0021 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YpsIP31758_3761 uvrA; UvrABC system, A protein K03701 uvrA; excinuclease ABC subunit A
D YpsIP31758_2839 uvrB; UvrABC system, B protein K03702 uvrB; excinuclease ABC subunit B
D YpsIP31758_2252 uvrC; UvrABC system, C protein K03703 uvrC; excinuclease ABC subunit C
D YpsIP31758_0209 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YpsIP31758_3860 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YpsIP31758_3859 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YpsIP31758_3890 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YpsIP31758_0040 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D YpsIP31758_1598 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D YpsIP31758_3292 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D YpsIP31758_3655 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D YpsIP31758_0980 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D YpsIP31758_2420 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D YpsIP31758_1193 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YpsIP31758_3110 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D YpsIP31758_1028 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YpsIP31758_4152 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YpsIP31758_3544 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YpsIP31758_2928 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YpsIP31758_1584 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YpsIP31758_1055 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YpsIP31758_3059 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YpsIP31758_3506 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YpsIP31758_2343 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_2243 conserved hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YpsIP31758_3760 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_B0126 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_3963 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YpsIP31758_0991 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D YpsIP31758_0989 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D YpsIP31758_0992 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YpsIP31758_3240 recA; protein RecA K03553 recA; recombination protein RecA
D YpsIP31758_2031 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D YpsIP31758_2030 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YpsIP31758_2032 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YpsIP31758_0116 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YpsIP31758_3638 priB; primosomal replication protein n K02686 priB; primosomal replication protein N
D YpsIP31758_3062 priC; primosomal replication protein n'' K04067 priC; primosomal replication protein N''
D YpsIP31758_3139 sbcC; nuclease SbcCD, C subunit K03546 sbcC; DNA repair protein SbcC/Rad50
D YpsIP31758_3138 sbcD; nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D YpsIP31758_3492 radA; DNA repair protein radA K04485 radA; DNA repair protein RadA/Sms
D YpsIP31758_4151 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D YpsIP31758_0037 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YpsIP31758_1138 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D YpsIP31758_3057 recR; recombination protein RecR K06187 recR; recombination protein RecR
D YpsIP31758_2889 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D YpsIP31758_3141 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D YpsIP31758_1535 cas1; crispr-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D YpsIP31758_2719 putative helicase K19789 radD; DNA repair protein RadD
D YpsIP31758_3949 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D YpsIP31758_2767 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YpsIP31758_4150 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YpsIP31758_1923 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YpsIP31758_B0031 putative DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YpsIP31758_3846 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YpsIP31758_3089 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YpsIP31758_0385 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YpsIP31758_1718 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D YpsIP31758_2579 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D YpsIP31758_0218 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YpsIP31758_1966 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D YpsIP31758_B0123 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D YpsIP31758_3157 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D YpsIP31758_B0053 mutagenesis and repair protein MucB K03502 umuC; DNA polymerase V
D YpsIP31758_B0052 mutagenesis and repair protein MucA K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D YpsIP31758_3770 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YpsIP31758_3418 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D YpsIP31758_1566 dinI; DNA-damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D YpsIP31758_3239 recX; regulatory protein RecX K03565 recX; regulatory protein
D YpsIP31758_0175 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D YpsIP31758_2536 helD; helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D YpsIP31758_2777 dinG; ATP-dependent helicase dinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YpsIP31758_2017 conserved hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YpsIP31758_2769 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YpsIP31758_1063 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YpsIP31758_1062 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YpsIP31758_2770 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ypi03029]
D YpsIP31758_3596 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D YpsIP31758_1713 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D YpsIP31758_1014 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D YpsIP31758_3867 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D YpsIP31758_3918 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D YpsIP31758_3919 fusA; translation elongation factor G K02355 fusA; elongation factor G
D YpsIP31758_1137 era; GTP-binding protein Era K03595 era; GTPase
D YpsIP31758_1773 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YpsIP31758_2926 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YpsIP31758_2035 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YpsIP31758_2043 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YpsIP31758_B0090 putative endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D YpsIP31758_3760 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_B0126 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D YpsIP31758_1021 surface antigen/outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D YpsIP31758_3466 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YpsIP31758_2887 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D YpsIP31758_3675 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YpsIP31758_3676 groS; chaperonin GroS K04078 groES; chaperonin GroES
D YpsIP31758_3465 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YpsIP31758_1168 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_2004 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_1171 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D YpsIP31758_1758 grxD; monothiol glutaredoxin GrxD K07390 grxD; monothiol glutaredoxin
D YpsIP31758_2454 putative ATPase Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YpsIP31758_3102 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YpsIP31758_4157 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YpsIP31758_3055 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ypi02000]
D YpsIP31758_0689 ABC transporter, permease/ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YpsIP31758_0690 ABC transporter, permease/ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YpsIP31758_2577 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D YpsIP31758_3080 mdlA; multidrug ABC transporter, permease protein/ATP-binding protein MdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YpsIP31758_3079 mdlB; multidrug ABC transporter, permease protein/ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YpsIP31758_1891 toxin ABC transporter, ATP-binding/permease protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YpsIP31758_1889 type I secretion system ATPase K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YpsIP31758_0105 bacteriocin ABC transporter, ATP-binding/permease protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YpsIP31758_2965 heavy metal ABC transporter (HMT) family, permease protein/ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D YpsIP31758_2389 ABC transporter, permease protein/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D YpsIP31758_0132 hasD; type I secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YpsIP31758_2601 cydC; ABC transporter, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YpsIP31758_2600 cydD; ABC transporter, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YpsIP31758_2610 macB; macrolide-specific ABC-type efflux carrier protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YpsIP31758_1311 efflux ABC transporter, ATP-binding/permease protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YpsIP31758_2551 uup; ABC transporter, ATP-binding protein Uup K15738 uup; ABC transport system ATP-binding/permease protein
D YpsIP31758_1299 cysP; sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YpsIP31758_0090 sulfate ABC transporter, sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YpsIP31758_1300 cysU; sulfate/thiosulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YpsIP31758_1301 cysW; sulfate/thiosulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YpsIP31758_1302 cysA; sulfate/thiosulfate ABC transporter, ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YpsIP31758_2850 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D YpsIP31758_0091 conserved hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D YpsIP31758_2849 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D YpsIP31758_2848 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YpsIP31758_2853 modF; ABC transporter, ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D YpsIP31758_3938 tauA; taurine ABC transporter, periplasmic taurine-binding protein K15551 tauA; taurine transport system substrate-binding protein
D YpsIP31758_3936 tauC; taurine ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D YpsIP31758_3937 tauB; taurine ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YpsIP31758_0353 putative ABC transporter, aliphatic sulfonates binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YpsIP31758_0355 putative ABC aliphatic sulfonates transporter, permease subunit K15554 ssuC; sulfonate transport system permease protein
D YpsIP31758_0356 putative ABC aliphatic sulfonates transporter, ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YpsIP31758_1350 fbpA; iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D YpsIP31758_1258 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D YpsIP31758_1349 fbpB; iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D YpsIP31758_1259 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D YpsIP31758_1260 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YpsIP31758_1348 fbpC; iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YpsIP31758_3415 thiP; thiamine/thiamine pyrophosphate ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D YpsIP31758_3416 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YpsIP31758_2645 potF; putrescine ABC transporter, periplasmic putrescine binding protein K11073 potF; putrescine transport system substrate-binding protein
D YpsIP31758_2642 potI; putrescine ABC transporter, permease protein K11074 potI; putrescine transport system permease protein
D YpsIP31758_2643 potH; putrescine ABC transporter, permease protein K11075 potH; putrescine transport system permease protein
D YpsIP31758_2644 potG; putrescine ABC transporter, ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D YpsIP31758_1219 potD; spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YpsIP31758_2059 putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YpsIP31758_2058 putative spermidine/putrescine ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YpsIP31758_1221 potB; spermidine/putrescine ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YpsIP31758_2057 putative spermidine/putrescine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YpsIP31758_1220 potC; spermidine/putrescine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YpsIP31758_1216 potA; spermidine/putrescine ABC transporter, ATP-binding subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YpsIP31758_2056 putative spermidine/putrescine ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YpsIP31758_1059 proX; glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D YpsIP31758_1060 proW; glycine betaine/L-proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D YpsIP31758_1061 proV; glycine betaine/L-proline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D YpsIP31758_2786 quaternary amine uptake ABC transporter (QAT) family, substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D YpsIP31758_2783 quaternary amine uptake ABC transporter (QAT) family, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D YpsIP31758_2785 quaternary amine uptake ABC transporter (QAT) family, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D YpsIP31758_2784 quaternary amine uptake ABC transporter (QAT) family, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YpsIP31758_1849 ABC transporter, periplasmic substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D YpsIP31758_1848 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D YpsIP31758_1847 ABC Transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D YpsIP31758_0306 malE2; maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YpsIP31758_0305 malF; maltose ABC transporter, permease protein K10109 malF; maltose/maltodextrin transport system permease protein
D YpsIP31758_0304 malG; maltose ABC transporter, permease protein K10110 malG; maltose/maltodextrin transport system permease protein
D YpsIP31758_0308 malK2; maltose ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_1524 carbohydrate uptake (CUT1 family) ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_0913 malK1; maltose/maltodextrin ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_2169 carbohydrate uptake (CUT1 family) ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_0525 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_3572 carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_0914 malE1; maltose/maltodextrin ABC transporter, periplasmic maltose/maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D YpsIP31758_0915 ABC maltose/maltodextrin transporter, permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YpsIP31758_0916 ABC maltose/maltodextrin transporter, permease subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YpsIP31758_1885 araF; L-arabinose ABC transporter, periplasmic L-arabinose-binding protein K10537 araF; L-arabinose transport system substrate-binding protein
D YpsIP31758_1883 araH; L-arabinose ABC transporter, permease protein K10538 araH; L-arabinose transport system permease protein
D YpsIP31758_1884 araG; L-arabinose ABC transporter, ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D YpsIP31758_1688 togB; oligogalacturonide ABC transporter, periplasmic oligogalacturonide-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D YpsIP31758_1691 togM; oligogalacturonide ABC tansporter, permease protein K10193 togM; oligogalacturonide transport system permease protein
D YpsIP31758_1690 togN; oligogalacturonide ABC tansporter, permease protein K10194 togN; oligogalacturonide transport system permease protein
D YpsIP31758_1689 togA; oligogalacturonide ABC transporter, ATP-binding protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D YpsIP31758_2467 mglB; galactose ABC transporter, periplasmic galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YpsIP31758_2465 mglC; galactose ABC transporter, permease protein K10541 mglC; methyl-galactoside transport system permease protein
D YpsIP31758_2466 mglA; galactose ABC transporter, ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D YpsIP31758_4101 xylF; D-xylose-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D YpsIP31758_4099 putative xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein
D YpsIP31758_4100 xylG; D-xylose transport ATP-binding protein xylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YpsIP31758_0812 sugar ABC transporter, periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_1507 rbsB2; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_4028 rbsB6; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YpsIP31758_0814 sugar ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D YpsIP31758_1509 rbsC2; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D YpsIP31758_4029 rbsC7; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D YpsIP31758_0813 sugar ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YpsIP31758_1508 rbsA2; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YpsIP31758_4030 rbsA6; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YpsIP31758_0147 putative sugar ABC transporter, periplasmic sugar-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YpsIP31758_0151 putative sugar ABC transporter, permease protein K23509 ytfT; galactofuranose transport system permease protein
D YpsIP31758_0149 putative sugar ABC transporter, permease protein K23509 ytfT; galactofuranose transport system permease protein
D YpsIP31758_0148 putative sugar ABC transporter, periplasmic sugar-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YpsIP31758_1853 rbsB3; ribose ABC transporter, periplasmic ribose-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D YpsIP31758_3253 rbsB5; ribose ABC transporter, periplasmic ribose-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D YpsIP31758_1852 rbsC3; ribose ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YpsIP31758_3250 rbsC6; ribose ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YpsIP31758_1851 rbsA3; ribose ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YpsIP31758_3251 rbsA5; ribose ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YpsIP31758_0909 rbsB1; ribose ABC transporter, periplasmic ribose-binding protein K17205 xltC; putative xylitol transport system substrate-binding protein
D YpsIP31758_0911 rbsC1; ribose ABC transporter, permease protein K17206 xltB; putative xylitol transport system permease protein
D YpsIP31758_0912 rbsA1; ribose ABC transporter, ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D YpsIP31758_2973 rbsB4; ribose ABC transporter, periplasmic ribose-binding protein K17208 ibpA; inositol transport system substrate-binding protein
D YpsIP31758_2971 rbsC5; ribose ABC transporter, permease protein K17209 iatP; inositol transport system permease protein
D YpsIP31758_2972 rbsA4; ribose ABC transporter, ATP-binding protein K17210 iatA; inositol transport system ATP-binding protein
D YpsIP31758_0256 ugpB; glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YpsIP31758_0257 ugpA; glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D YpsIP31758_0258 ugpE; glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D YpsIP31758_0259 ugpC; glycerol-3-phosphate ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D YpsIP31758_3524 lsrB; autoinducer AI-2 ABC transporter, periplasmic AI-2-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YpsIP31758_3522 lsrC; autoinducer AI-2 ABC transporter, permease protein LsrC K10556 lsrC; AI-2 transport system permease protein
D YpsIP31758_3523 lsrD; autoinducer AI-2 ABC transporter, permease protein LsrD K10557 lsrD; AI-2 transport system permease protein
D YpsIP31758_3521 lsrA; autoinducer AI-2 ABC transporter, ATP binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YpsIP31758_0450 mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YpsIP31758_0449 putative ABC transporter, permease protein YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YpsIP31758_0448 putative ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YpsIP31758_0451 ttg2D; toluene tolerance protein Ttg2D K07323 mlaC; phospholipid transport system substrate-binding protein
D YpsIP31758_0452 putative anti-anti-sigma factor K07122 mlaB; phospholipid transport system transporter-binding protein
D YpsIP31758_0528 sugar ABC transporter, periplasmic sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YpsIP31758_2172 carbohydrate uptake (CUT1 family) ABC transporter, periplasmic carbohydrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YpsIP31758_3575 carbohydrate uptake ABC transporter-1 (CUT1) family, periplasmic carbohydrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YpsIP31758_1527 carbohydrate uptake (CUT1 family) ABC transporter, periplasmic carbohydrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YpsIP31758_0529 sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YpsIP31758_1528 carbohydrate uptake (CUT1 family) ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YpsIP31758_2171 carbohydrate uptake (CUT1 family) ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YpsIP31758_3574 carbohydrate uptake ABC transporter-1 (CUT1) family, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YpsIP31758_0530 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YpsIP31758_1529 carbohydrate uptake (CUT1 family) ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YpsIP31758_2170 carbohydrate uptake (CUT1 family) ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YpsIP31758_3573 carbohydrate uptake ABC transporter-1 (CUT1) family, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YpsIP31758_0364 carbohydrate uptake (CUT2 family) ABC transporter, periplasmic carbohydrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YpsIP31758_2309 carbohydrate uptake ABC transporter 2 (CUT2) family, periplasmic carbohydrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YpsIP31758_2689 putative ribose ABC transporter, periplasmic ribose-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YpsIP31758_2457 conserved hypothetical protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YpsIP31758_3265 carbohydrate uptake ABC transporter 2 (CUT2) family, periplasmic carbohydrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YpsIP31758_2307 carbohydrate uptake ABC transporter 2 (CUT2) family, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_0366 carbohydrate uptake (CUT2 family) ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_0367 carbohydrate uptake (CUT2 family) ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_2310 carbohydrate uptake ABC transporter 2 (CUT2) family, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_2687 putative ribose ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_2424 rbsC4; ribose ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_3267 carbohydrate uptake ABC transporter 2 (CUT2) family, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_3268 carbohydrate uptake ABC transporter 2 (CUT2) family, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_0348 RbsD/FucU family transport protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YpsIP31758_2308 carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_0365 carbohydrate uptake (CUT2 family) ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_2688 putative ribose ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_2423 rbsA7; ribose ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_3266 carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YpsIP31758_4171 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D YpsIP31758_3134 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YpsIP31758_4170 pstC2; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D YpsIP31758_1228 pstC1; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D YpsIP31758_4169 pstA1; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D YpsIP31758_1229 pstA2; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D YpsIP31758_4168 pstB1; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YpsIP31758_1230 pstB2; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YpsIP31758_2798 phnD; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D YpsIP31758_2796 phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D YpsIP31758_2797 phnE; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D YpsIP31758_2799 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YpsIP31758_1430 hisM; histidine ABC transporter, permease protein HisM K10015 hisM; histidine transport system permease protein
D YpsIP31758_1429 hisQ; histidine ABC transporter, permease protein HisQ K10016 hisQ; histidine transport system permease protein
D YpsIP31758_1431 hisP; histidine ABC transporter, ATP-binding protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_1428 hisJ; histidine ABC transporter, periplasmic histidine-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D YpsIP31758_1495 glnH; glutamine ABC transporter, periplasmic glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D YpsIP31758_1494 glnP; glutamine ABC transporter, permease protein K10037 glnP; glutamine transport system permease protein
D YpsIP31758_1493 glnQ; glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_2639 artJ; arginine ABC transporter, periplasmic substrate-binding protein ArtJ K09996 artJ; arginine transport system substrate-binding protein
D YpsIP31758_2626 artI; arginine ABC transporter, periplasmic substrate-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D YpsIP31758_2628 artM; arginine ABC transporter, permease protein ArtM K09998 artM; arginine transport system permease protein
D YpsIP31758_2627 artQ; arginine ABC transporter, permease protein ArtQ K09999 artQ; arginine transport system permease protein
D YpsIP31758_2625 artP; arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_2920 gltI; glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YpsIP31758_2922 gltK; glutamate/aspartate ABC transporter, permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D YpsIP31758_2921 gltJ; glutamate/aspartate ABC transporter, permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D YpsIP31758_2923 gltL; glutamate/aspartate ABC transporter, ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_2274 fliY; cystine-binding periplasmic protein FliY K02424 tcyA; L-cystine transport system substrate-binding protein
D YpsIP31758_2273 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D YpsIP31758_2272 amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_0244 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YpsIP31758_0245 livH; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YpsIP31758_0246 livM; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YpsIP31758_0247 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YpsIP31758_0248 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YpsIP31758_1041 metQ; D-methionine ABC transporter, periplasmic D-methionine-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D YpsIP31758_2662 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D YpsIP31758_1042 metI; D-methionine ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D YpsIP31758_2660 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D YpsIP31758_1043 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YpsIP31758_2661 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YpsIP31758_2794 urtA; urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D YpsIP31758_2793 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K11960 urtB; urea transport system permease protein
D YpsIP31758_2792 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K11961 urtC; urea transport system permease protein
D YpsIP31758_2791 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D YpsIP31758_2790 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D YpsIP31758_2840 putative amino acid ABC transporter, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D YpsIP31758_3190 amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YpsIP31758_4165 polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YpsIP31758_4163 polar amino amino acid ABC transporter, PAAT family, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D YpsIP31758_4164 polar amino amino acid ABC transporter, PAAT family, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D YpsIP31758_3188 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D YpsIP31758_3189 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D YpsIP31758_3187 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YpsIP31758_1960 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YpsIP31758_1798 mppA; murein tripeptide ABC transporter, periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YpsIP31758_1959 oppB; oligopeptide ABC transporter, permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D YpsIP31758_1958 oppC; oligopeptide ABC transporter, permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D YpsIP31758_1957 oppD; oligopeptide ABC transporter, ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D YpsIP31758_1956 oppF; oligopeptide ABC transporter, ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D YpsIP31758_4075 dppA; dipeptide ABC transporter, periplasmic dipeptide-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D YpsIP31758_4074 dppB; dipeptide ABC transporter, permease protein DppB K12369 dppB; dipeptide transport system permease protein
D YpsIP31758_4073 dppC; dipeptide ABC transporter, permease protein DppC K12370 dppC; dipeptide transport system permease protein
D YpsIP31758_4072 dppD; dipeptide ABC transporter, ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D YpsIP31758_4071 dppF; dipeptide ABC transporter, ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D YpsIP31758_1784 sapA; peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D YpsIP31758_1783 sapB; peptide ABC transporter, permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D YpsIP31758_1782 sapC; peptide ABC transporter, permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D YpsIP31758_1781 sapD; peptide ABC transporter, ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D YpsIP31758_1780 sapF; peptide ABC transporter, ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D YpsIP31758_3551 ABC dipeptide/oligopeptide/nickel transporter, periplasmic dipeptide/oligopeptide/nickel-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YpsIP31758_1071 yntA; nickel ABC transporter, periplasmic nickel-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YpsIP31758_3552 ABC dipeptide/oligopeptide/nickel transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YpsIP31758_1072 yntB; nickel ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YpsIP31758_3553 ABC dipeptide/oligopeptide/nickel transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YpsIP31758_1073 yntC; nickel ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YpsIP31758_3554 ABC dipeptide/oligopeptide/nickel transporter, ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YpsIP31758_1074 yntD; nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YpsIP31758_3555 ABC dipeptide/oligopeptide/nickel transporter, ATP binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YpsIP31758_1075 yntE; nickel ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YpsIP31758_2711 ABC transporter, periplamic substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D YpsIP31758_2712 ABC transporter, permease protein K13894 yejB; microcin C transport system permease protein
D YpsIP31758_2713 ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D YpsIP31758_2714 ABC transporter, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D YpsIP31758_3332 fhuD; ferrichrome ABC transporter, periplasmic ferrichrome-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YpsIP31758_3331 fhuB; ferrichrome ABC transporter, permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D YpsIP31758_3333 fhuC; ferrichrome ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YpsIP31758_3803 hmuT; hemin ABC transporter, periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D YpsIP31758_3804 hmuU; hemin ABC transporter, permease protein HmuU K25133 hmuU; heme transport system permease protein
D YpsIP31758_3805 hmuV; hemin ABC transporter, ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D YpsIP31758_0617 ferrienterobactin-binding periplasmic protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D YpsIP31758_2441 fepB; ferric enterobactin ABC transporter, ferric enterobactin-binding periplasmic protein FepB K25286 fagD; iron-siderophore transport system substrate-binding protein
D YpsIP31758_2442 fepD; ferric enterobactin ABC transporter, permease protein FepD K23186 fepD; iron-siderophore transport system permease protein
D YpsIP31758_2443 fepG; ferric enterobactin ABC transporter, permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D YpsIP31758_2444 fepC; ferric enterobactin ABC transporter, ATP-binding protein FepC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YpsIP31758_4091 iron chelate ABC transporter, periplasmic iron-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D YpsIP31758_4093 iron chelate ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D YpsIP31758_4092 iron chelate ABC transporter, permease protein K25284 yclN; iron-siderophore transport system permease protein
D YpsIP31758_4095 iron chelate ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D YpsIP31758_0816 ABC transporter, periplasmic substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YpsIP31758_2669 putative ABC transporter, periplasmic iron siderophore/cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YpsIP31758_2668 ABC transporter, iron chelate uptake transporter (FeCT) family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D YpsIP31758_2634 iron chelate ABC transporter (FeCT) family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D YpsIP31758_2633 iron chelate ABC transporter (FeCT) family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YpsIP31758_2667 ABC transporter, iron chelate uptake transporter (FeCT) family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YpsIP31758_3326 btuF; vitamin B12-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D YpsIP31758_1720 btuC; vitamin B12 import system permease protein BtuC K06073 btuC; vitamin B12 transport system permease protein
D YpsIP31758_1722 btuD; vitamin B12 import ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D YpsIP31758_2027 znuA; high-affinity zinc uptake ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D YpsIP31758_2029 znuB; high-affinity zinc uptake ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D YpsIP31758_2028 znuC; high-affinity zinc uptake ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D YpsIP31758_1705 yfeA; chelated iron ABC transporter, periplasmic iron binding protein YfeA K11604 sitA; manganese/iron transport system substrate-binding protein
D YpsIP31758_1703 yfeC; chelated iron ABC transporter, permease protein YfeC K11605 sitC; manganese/iron transport system permease protein
D YpsIP31758_1702 yfeD; chelated iron ABC transporter, permease protein YfeD K11606 sitD; manganese/iron transport system permease protein
D YpsIP31758_1704 yfeB; chelated iron ABC transporter, ATP-binding protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein
D YpsIP31758_3542 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D YpsIP31758_3541 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D YpsIP31758_0442 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D YpsIP31758_2815 ABC transporter, permease protein K25180 ybhR; drug efflux transport system permease protein
D YpsIP31758_2814 ABC transporter, permease protein K25181 ybhS; drug efflux transport system permease protein
D YpsIP31758_2813 ABC transporter, ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D YpsIP31758_2812 transport protein, MFP family K25183 ybhG; membrane fusion protein YbhG
D YpsIP31758_1600 lolC; lipoprotein-releasing system, transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D YpsIP31758_1602 lolE; lipoprotein releasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D YpsIP31758_1601 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D YpsIP31758_1390 ccmD; heme exporter protein D K02196 ccmD; heme exporter protein D
D YpsIP31758_1389 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D YpsIP31758_1388 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D YpsIP31758_1387 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D YpsIP31758_0241 putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D YpsIP31758_0240 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D YpsIP31758_3348 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YpsIP31758_3349 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YpsIP31758_2137 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YpsIP31758_2138 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YpsIP31758_2476 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YpsIP31758_3019 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YpsIP31758_3020 putatitve ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YpsIP31758_2478 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YpsIP31758_2136 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YpsIP31758_1743 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D YpsIP31758_1880 putative sodium/bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D YpsIP31758_0706 transporter, divalent anion:Na+ symporter (DASS) family K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D YpsIP31758_1750 mdtK; multidrug resistance protein MdtK K26939 norM; MATE family, multidrug efflux pump
D YpsIP31758_2407 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D YpsIP31758_2394 lacY; lactose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D YpsIP31758_3409 setA; sugar efflux transporter A K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D YpsIP31758_2823 xapB; xanthosine transporter XapB K11537 xapB; MFS transporter, NHS family, xanthosine permease
D YpsIP31758_3469 transporter, major facilitator family K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YpsIP31758_1298 transporter, major facilitator family K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D YpsIP31758_0490 putative hexuronate MFS transporter ExuT K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D YpsIP31758_0926 putative hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D YpsIP31758_2358 hpaX; 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D YpsIP31758_2414 transporter, major facilitator family K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D YpsIP31758_1162 MFS transporter, phenyl propionate permease (PPP) family K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D YpsIP31758_0225 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D YpsIP31758_4078 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YpsIP31758_0976 transporter, major facilitator family K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D YpsIP31758_3096 permease, AmpG family K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D YpsIP31758_2717 bcr; bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YpsIP31758_1996 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YpsIP31758_4110 mdfA; multidrug translocase MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D YpsIP31758_2050 transporter, major facilitator family K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D YpsIP31758_0971 transporter, major facilitator family K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D YpsIP31758_3202 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D YpsIP31758_1680 transporter, major facilitator family K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D YpsIP31758_1212 mdtD; transporter, major facilitator family K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D YpsIP31758_B0066 putative membrane protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D YpsIP31758_3033 fsr; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D YpsIP31758_1871 transporter, major facilitator family K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D YpsIP31758_2592 transporter, major facilitator family K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D YpsIP31758_3954 tsgA; major facilitator family transporter TsgA K06141 tsgA; MFS transporter, TsgA protein
D YpsIP31758_1543 transporter, major facilitator family K08368 yaaU; MFS transporter, putative metabolite transport protein
D YpsIP31758_1316 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YpsIP31758_0982 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D YpsIP31758_1317 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D YpsIP31758_0437 phosphocarrier protein, HPr family K08485 ptsO; phosphocarrier protein NPr
D YpsIP31758_3528 phosphocarrier, HPr family K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-]
D YpsIP31758_2683 phosphocarrier, HPr family K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D YpsIP31758_1315 PTS system, glucose-specific EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_1586 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YpsIP31758_0919 PTS system, EIIB component K02778 ptsGb; glucose PTS system EIIB component [EC:2.7.1.199]
D YpsIP31758_2908 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YpsIP31758_0431 treB; pts system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YpsIP31758_2681 fruA; PTS system, fructose-specific EIIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YpsIP31758_3530 frwB; PTS system, fructose-specific EIIB component 2 K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D YpsIP31758_3532 putative PTS system, Fru family, IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D YpsIP31758_3529 frwC; PTS system, fructose-specific EIIC component 2 K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D YpsIP31758_4128 mtlA; PTS system, mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YpsIP31758_1093 chbA; PTS system, cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YpsIP31758_1091 chbB; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YpsIP31758_1092 chbC; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YpsIP31758_2368 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YpsIP31758_2369 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component
D YpsIP31758_2370 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D YpsIP31758_0937 agaF; PTS system, N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_0940 agaV; PTS system, N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2 K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YpsIP31758_0939 agaW; PTS system, N-acetylgalactosamine-specific IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YpsIP31758_0938 agaE; PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YpsIP31758_1440 cmtB; mannitol-specific cryptic phosphotransferase enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YpsIP31758_1438 PTS system, lactose/cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D YpsIP31758_1437 putative sugar-specific permease, SgaT/UlaA family K03475 ulaA; ascorbate PTS system EIIC component
D YpsIP31758_0439 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D YpsIP31758_0102 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D YpsIP31758_1087 kch; potassium channel protein Kch K10716 kch; voltage-gated potassium channel
D YpsIP31758_3077 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D YpsIP31758_1775 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YpsIP31758_2665 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YpsIP31758_0462 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D YpsIP31758_1306 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D YpsIP31758_2588 putative formate transporter FocA K06212 focA; formate transporter
D YpsIP31758_3958 fnt; formate/nitrite transporter K02598 nirC; nitrite transporter
D YpsIP31758_3886 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D YpsIP31758_3064 kefA; potassium efflux system KefA K05802 mscK; potassium-dependent mechanosensitive channel
D YpsIP31758_3664 mechanosensitive ion channel domain protein K22051 mscM; miniconductance mechanosensitive channel
D YpsIP31758_0851 transporter, small conductance mechanosensitive ion channel (MscS) family K03442 mscS; small conductance mechanosensitive channel
D YpsIP31758_1534 transporter, small conductance mechanosensitive ion channel (MscS) family K16053 ybdG; miniconductance mechanosensitive channel
D YpsIP31758_1224 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D YpsIP31758_1084 yut; urea transporter K08717 utp; urea transporter
D YpsIP31758_1636 motA1; chemotaxis protein motA K02556 motA; chemotaxis protein MotA
D YpsIP31758_0661 motA2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D YpsIP31758_1637 motB1; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YpsIP31758_0662 motB2; flagellar motor protein B K02557 motB; chemotaxis protein MotB
D YpsIP31758_0591 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D YpsIP31758_0592 exbD; tonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D YpsIP31758_2871 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D YpsIP31758_2870 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D YpsIP31758_0214 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D YpsIP31758_1799 zntB; zinc transport protein zntB K16074 zntB; zinc transporter
D YpsIP31758_2957 crcB; crcB protein K06199 crcB; fluoride exporter
D YpsIP31758_1088 CrcB-like protein K06199 crcB; fluoride exporter
D YpsIP31758_1089 CrcB-like protein K06199 crcB; fluoride exporter
D YpsIP31758_3627 CBS/transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YpsIP31758_3232 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YpsIP31758_2559 ompF; outer membrane protein F K09476 ompF; outer membrane pore protein F
D YpsIP31758_2778 outer membrane protein N K11929 phoE; outer membrane pore protein E
D YpsIP31758_2761 porin K09475 ompC; outer membrane pore protein C
D YpsIP31758_0309 lamB; maltoporin LamB K02024 lamB; maltoporin
D YpsIP31758_0920 porin, LamB family K02024 lamB; maltoporin
D YpsIP31758_2542 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D YpsIP31758_1501 ompX; outer membrane protein X K11934 ompX; outer membrane protein X
D YpsIP31758_1160 ail; attachment invasion locus protein K16078 ail; attachment invasion locus protein
D YpsIP31758_1397 fadL; long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D YpsIP31758_0169 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1663 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1677 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1365 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_2676 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_2165 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_0673 putative autotransporter protein K12678 aidA-I; autotransporter family porin
D YpsIP31758_0142 btuB; TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D YpsIP31758_0131 hasA; hemophore HasA K12545 hasA; heme acquisition protein HasA
D YpsIP31758_0130 hasR; TonB-dependent heme receptor HasR K16152 hasR; heme acquisition protein HasR
D YpsIP31758_2440 fhuE; FhuE receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D YpsIP31758_3276 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D YpsIP31758_2666 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D YpsIP31758_3801 hmuR; TonB-dependent hemin receptor HmuR K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D YpsIP31758_0815 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YpsIP31758_2373 fcuA; ferrichrome receptor FcuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YpsIP31758_3953 oprC; TonB-dependent copper receptor OprC K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YpsIP31758_0681 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YpsIP31758_0710 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YpsIP31758_0573 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D YpsIP31758_3584 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system
D YpsIP31758_1021 surface antigen/outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D YpsIP31758_1189 putative lipoprotein K17713 bamB; outer membrane protein assembly factor BamB
D YpsIP31758_1248 NlpB/DapX family lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D YpsIP31758_3215 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D YpsIP31758_2890 lipoprotein, SmpA/OmlA family K06186 bamE; outer membrane protein assembly factor BamE
D YpsIP31758_3625 surface antigen/outer membrane protein, OMP85 family K07278 tamA; translocation and assembly module TamA
D YpsIP31758_3624 conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D YpsIP31758_4068 kdgM1; oligogalacturonate-specific porin protein KdgM K22110 kdgM; oligogalacturonate-specific porin family protein
D YpsIP31758_1687 kdgM2; oligogalacturonate-specific porin protein KdgM K22110 kdgM; oligogalacturonate-specific porin family protein
D YpsIP31758_0868 haemagglutinin repeat protein K21449 ata; trimeric autotransporter adhesin
D YpsIP31758_0443 yhbN; cell envelope biogenesis protein YhbN K09774 lptA; lipopolysaccharide export system protein LptA
D YpsIP31758_0444 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D YpsIP31758_3441 imp; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D YpsIP31758_2927 rlpB; rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D YpsIP31758_3751 conserved hypothetical protein K19298 subB; subtilase cytotoxin, subunit B
D YpsIP31758_2918 corC; magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D YpsIP31758_2460 lrgA family protein K06518 cidA; holin-like protein
D YpsIP31758_2756 putative transport protein K16210 togT; oligogalacturonide transporter
D YpsIP31758_2670 lysP; lysine-specific permease LysP K11733 lysP; lysine-specific permease
D YpsIP31758_3366 aroP2; aromatic amino acid transport protein AroP K11734 aroP; aromatic amino acid transport protein AroP
D YpsIP31758_2381 aroP1; aromatic amino acid transport protein AroP K11734 aroP; aromatic amino acid transport protein AroP
D YpsIP31758_3132 proY; proline-specific permease ProY K11736 proY; proline-specific permease ProY
D YpsIP31758_2259 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D YpsIP31758_2147 ansP; L-asparagine permease K11738 ansP; L-asparagine permease
D YpsIP31758_4084 Amino acid permease family protein K16234 hutT; histidine transporter
D YpsIP31758_1828 putative arginine/ornithine antiporter ArcD K03758 arcD; arginine:ornithine antiporter / lysine permease
D YpsIP31758_2782 adiC; arginine/agmatine antiporter K03759 adiC; arginine:agmatine antiporter
D YpsIP31758_0565 amino acid permease family protein K16263 yjeH; amino acid efflux transporter
D YpsIP31758_2863 zitB; zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein
D YpsIP31758_0088 fieF; cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF
D YpsIP31758_3068 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D YpsIP31758_3585 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D YpsIP31758_0668 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D YpsIP31758_1268 acrD; acriflavine resistance protein D K18324 acrD; multidrug efflux pump
D YpsIP31758_1214 mdtB; multidrug resistance protein MdtB K07788 mdtB; multidrug efflux pump
D YpsIP31758_1213 mdtC; multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump
D YpsIP31758_1804 multidrug resistance protein, SMR family protein K03297 emrE; small multidrug resistance pump
D YpsIP31758_3671 sugE; quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D YpsIP31758_2019 mdtI; multidrug resistance protein MdtI K11742 mdtI; spermidine export protein MdtI
D YpsIP31758_2020 mdtJ; multidrug resistance protein MdtJ K11743 mdtJ; spermidine export protein MdtJ
D YpsIP31758_1101 integral membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D YpsIP31758_1500 integral membrane protein K11939 rhtA; inner membrane transporter RhtA
D YpsIP31758_3752 rhaT; L-rhamnose-proton symporter K02856 rhaT; L-rhamnose-H+ transport protein
D YpsIP31758_0215 rarD; RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D YpsIP31758_1730 multidrug resistance protein, SMR family K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D YpsIP31758_0693 gntP; high-affinity gluconate transporter GntP K16321 gntP; high-affinity gluconate transporter
D YpsIP31758_4021 gntT; high-affinity gluconate transporter GntT K06155 gntT; Gnt-I system high-affinity gluconate transporter
D YpsIP31758_4051 transporter, gluconate:H+ symporter (GntP) family K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D YpsIP31758_3679 dcuA; anaerobic C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D YpsIP31758_3222 dcuB; anaerobic C4-dicarboxylate transporter dcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D YpsIP31758_2828 betT; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D YpsIP31758_2124 chaA; calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D YpsIP31758_0447 Sodium/calcium exchanger protein YrbG K07301 yrbG; cation:H+ antiporter
D YpsIP31758_4033 pitA; low-affinity inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D YpsIP31758_0389 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D YpsIP31758_2265 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D YpsIP31758_3837 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D YpsIP31758_3834 gltP; glutamate/aspartate symport protein K11102 gltP; proton glutamate symport protein
D YpsIP31758_4064 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YpsIP31758_0495 sstT; sodium/serine (threonine) transporter K07862 sstT; serine/threonine transporter
D YpsIP31758_0036 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D YpsIP31758_3464 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D YpsIP31758_2000 nhaB; Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D YpsIP31758_1856 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D YpsIP31758_0359 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D YpsIP31758_1549 transporter, monovalent cation:proton antiporter-2 (CPA2) family K11105 cvrA; potassium/hydrogen antiporter
D YpsIP31758_3930 kefB; glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D YpsIP31758_3931 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D YpsIP31758_3034 transporter, monovalent cation:proton antiporter-2 (CPA2) family K26735 KEA4_5_6; K+:H+ antiporter
D YpsIP31758_0286 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D YpsIP31758_3885 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D YpsIP31758_1236 uraA; uracil permease K02824 uraA; uracil permease
D YpsIP31758_0034 yicE; xanthine permease K16345 xanP; xanthine permease XanP
D YpsIP31758_4161 purine transporter, AzgA family K06901 pbuG; adenine/guanine/hypoxanthine permease
D YpsIP31758_0358 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D YpsIP31758_1326 nupC; nucleoside transporter NupC K11535 nupC; nucleoside transport protein
D YpsIP31758_2774 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D YpsIP31758_2697 mtr; tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D YpsIP31758_2656 sdaC; serine transporter K03837 sdaC; serine transporter
D YpsIP31758_3807 putative serine transporter K26603 yhjV; inner membrane transport protein
D YpsIP31758_3329 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D YpsIP31758_1867 chloride transporter, chloride channel (ClC) family K03281 clcA; chloride channel protein, CIC family
D YpsIP31758_1085 ureH; high-affinity nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D YpsIP31758_2061 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D YpsIP31758_1327 mtnH; manganese transport protein MntH K03322 mntH; manganese transport protein
D YpsIP31758_3282 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D YpsIP31758_0190 polysaccharide biosynthesis protein K16693 wzxE; enterobacterial common antigen flippase
D YpsIP31758_2046 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D YpsIP31758_0261 transporter, auxin efflux carrier (AEC) family protein K13936 mdcF; malonate transporter and related proteins
D YpsIP31758_1191 transporter, auxin efflux carrier family K13936 mdcF; malonate transporter and related proteins
D YpsIP31758_0006 kup; potassium uptake protein K03549 kup; KUP system potassium uptake protein
D YpsIP31758_0852 argO; arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D YpsIP31758_0220 rhtB; homoserine Rht transporter RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein
D YpsIP31758_0219 rhtC; threonine efflux protein RhtC K05835 rhtC; threonine efflux protein
D YpsIP31758_3452 translocator protein, LysE family K05835 rhtC; threonine efflux protein
D YpsIP31758_3198 putative azaleucine resistance protein AzlC K26605 azlC; branched chain amino acid efflux pump
D YpsIP31758_3199 conserved hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D YpsIP31758_0421 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D YpsIP31758_0534 Fusaric acid resistance domain protein K15547 mdtO; multidrug resistance protein MdtO
D YpsIP31758_1240 putative permease PerM K03548 perM; putative permease
D YpsIP31758_0231 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D YpsIP31758_1707 membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D YpsIP31758_3388 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D YpsIP31758_2372 putative membrane protein K23242 mntP; manganese efflux pump family protein
D YpsIP31758_2141 iron permease, FTR1 family K07243 FTR; high-affinity iron transporter
D YpsIP31758_2264 efeU; ferrous iron permease EfeU K07243 FTR; high-affinity iron transporter
D YpsIP31758_2263 conserved hypothetical protein K07224 efeO; iron uptake system component EfeO
D YpsIP31758_2262 Dyp-type peroxidase family protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D YpsIP31758_2140 conserved hypothetical protein K07230 p19; periplasmic iron binding protein
D YpsIP31758_1164 transporter, Ni2+-Co2+ transporter (NiCoT) family K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D YpsIP31758_0134 tonB domain protein K03832 tonB; periplasmic protein TonB
D YpsIP31758_1946 tonB; TonB protein K03832 tonB; periplasmic protein TonB
D YpsIP31758_2867 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D YpsIP31758_2869 tolA; protein TolA K03646 tolA; colicin import membrane protein
D YpsIP31758_2868 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D YpsIP31758_3261 dmsA; anaerobic dimethyl sulfoxide reductase, A subunit K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YpsIP31758_1344 putative anaerobic dimethyl sulfoxide reductase, A subunit K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YpsIP31758_1343 putative anaerobic dimethyl sulfoxide reductase, B subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YpsIP31758_3260 dmsB; anaerobic dimethyl sulfoxide reductase, B subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YpsIP31758_3259 dmsC; anaerobic dimethyl sulfoxide reductase, C subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YpsIP31758_1342 putative anaerobic dimethyl sulfoxide reductase, C subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YpsIP31758_0974 molybdopterin oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D YpsIP31758_3201 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_0535 auxiliary transport protein, membrane fusion protein family K15549 mdtN; membrane fusion protein, multidrug efflux system
D YpsIP31758_0133 hasE; HlyD family hemolysin secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D YpsIP31758_1890 type I secretion membrane fusion protein, HlyD family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YpsIP31758_0106 auxiliary transport protein, membrane fusion protein (MFP) family K13408 cvaA; membrane fusion protein
D YpsIP31758_3586 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_3067 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_2851 conserved hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D YpsIP31758_1215 mdtA; multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D YpsIP31758_2611 macA; macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YpsIP31758_1312 efflux ABC transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YpsIP31758_0420 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D YpsIP31758_2864 pnuC; nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D YpsIP31758_3984 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D YpsIP31758_3985 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D YpsIP31758_3986 conserved hypothetical protein K07490 feoC; ferrous iron transport protein C
D YpsIP31758_4034 uspB; universal stress protein B K06144 uspB; universal stress protein B
D YpsIP31758_1392 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D YpsIP31758_1632 putative transporter, Mg2+ transporter-C (MgtC) family K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YpsIP31758_1805 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YpsIP31758_2338 copD; copper resistance protein D K07245 pcoD; copper resistance protein D
D YpsIP31758_2339 copC; copper resistance protein CopC K07156 copC; copper resistance protein C
D YpsIP31758_1990 mipA; MltA-interacting protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:ypi02044]
D YpsIP31758_0573 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D YpsIP31758_1891 toxin ABC transporter, ATP-binding/permease protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YpsIP31758_1889 type I secretion system ATPase K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YpsIP31758_1890 type I secretion membrane fusion protein, HlyD family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YpsIP31758_0132 hasD; type I secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YpsIP31758_0133 hasE; HlyD family hemolysin secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D YpsIP31758_0106 auxiliary transport protein, membrane fusion protein (MFP) family K13408 cvaA; membrane fusion protein
D YpsIP31758_0105 bacteriocin ABC transporter, ATP-binding/permease protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YpsIP31758_0952 general secretion pathway protein C-like protein K02452 gspC; general secretion pathway protein C
D YpsIP31758_0953 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D YpsIP31758_0954 gspE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YpsIP31758_3731 type IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YpsIP31758_0955 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D YpsIP31758_0956 gspG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D YpsIP31758_0957 gspI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D YpsIP31758_0958 gspJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D YpsIP31758_0959 gspK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YpsIP31758_0960 gspL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D YpsIP31758_0963 type IV prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YpsIP31758_0962 putative lipoprotein K02465 gspS; general secretion pathway protein S
D YpsIP31758_1184 pilF; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D YpsIP31758_0831 twitching motility protein K02669 pilT; twitching motility protein PilT
D YpsIP31758_0603 type IV prepilin peptidase family K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YpsIP31758_0602 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D YpsIP31758_0601 type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D YpsIP31758_0600 conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YpsIP31758_0599 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YpsIP31758_0598 type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D YpsIP31758_0597 type II secretion system protein K12511 tadC; tight adherence protein C
D YpsIP31758_0596 putative lipoprotein K12512 tadD; tight adherence protein D
D YpsIP31758_0595 TadE-like family protein K12513 tadE; tight adherence protein E
D YpsIP31758_0594 hypothetical protein K12514 tadF; tight adherence protein F
D YpsIP31758_0593 conserved hypothetical protein K12515 tadG; tight adherence protein G
D YpsIP31758_0985 prepilin-type N-terminal cleavage/methylation domain protein K02679 ppdA; prepilin peptidase dependent protein A
D YpsIP31758_0986 putative prepilin peptidase dependent protein K02680 ppdB; prepilin peptidase dependent protein B
D YpsIP31758_0988 prepilin peptidase dependent protein-like protein K02681 ppdC; prepilin peptidase dependent protein C
D YpsIP31758_3370 pilA; type IV pilin PilA K02682 ppdD; prepilin peptidase dependent protein D
D YpsIP31758_3371 putative protein transport protein HofB K02504 hofB; protein transport protein HofB
D YpsIP31758_3372 putative protein transport protein HofC K02505 hofC; protein transport protein HofC
D YpsIP31758_3971 conserved hypothetical protein K12288 hofM; pilus assembly protein HofM
D YpsIP31758_3970 fimbrial assembly protein PilN K12289 hofN; pilus assembly protein HofN
D YpsIP31758_3969 conserved hypothetical protein K12290 hofO; pilus assembly protein HofO
D YpsIP31758_3968 conserved hypothetical protein K12291 hofP; pilus assembly protein HofP
D YpsIP31758_3967 hofQ; protein transporter HofQ K02507 hofQ; protein transport protein HofQ
D YpsIP31758_0828 putative YggT family membrane protein K02221 yggT; YggT family protein
D YpsIP31758_3087 putative competence protein ComEA K02237 comEA; competence protein ComEA
D YpsIP31758_2578 comEC; DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D YpsIP31758_3830 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D YpsIP31758_3829 type III secretion apparatus protein, YscD/HrpQ family K03220 yscD; type III secretion protein D
D YpsIP31758_3826 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D YpsIP31758_3822 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D YpsIP31758_3818 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YpsIP31758_3815 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D YpsIP31758_3814 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D YpsIP31758_3813 type III secretion protein, HrpO family K03227 yscS; type III secretion protein S
D YpsIP31758_3812 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D YpsIP31758_3811 type III secretion protein, YscU/HrpY family K03229 yscU; type III secretion protein U
D YpsIP31758_3819 type III secretion protein, HrcV family K03230 yscV; type III secretion protein V
D YpsIP31758_2333 flhA1; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YpsIP31758_0622 flhA2; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YpsIP31758_2334 flhB1; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YpsIP31758_0623 flhB2; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YpsIP31758_0631 fliF2; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D YpsIP31758_2290 fliF1; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D YpsIP31758_2292 fliH2; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YpsIP31758_0633 fliH1; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YpsIP31758_2293 fliI1; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YpsIP31758_0634 fliI2; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YpsIP31758_2300 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YpsIP31758_0627 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YpsIP31758_2301 fliO; flagellar protein fliO K02418 fliO; flagellar protein FliO/FliZ
D YpsIP31758_2302 fliP2; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YpsIP31758_0626 fliP1; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YpsIP31758_2303 fliQ1; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YpsIP31758_0625 fliQ2; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YpsIP31758_2304 fliR1; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YpsIP31758_0624 fliR2; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YpsIP31758_A0025 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D YpsIP31758_3748 conserved hypothetical protein K12055 K12055; chromosome partitioning related protein ParA
D YpsIP31758_3718 conserved hypothetical protein K12071 traD; conjugal transfer pilus assembly protein TraD
D YpsIP31758_0880 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D YpsIP31758_B0110 type IV secretion system protein DotB K12203 dotB; defect in organelle trafficking protein DotB [EC:7.2.4.8]
D YpsIP31758_B0111 putative type IV secretion system protein DotC K12204 dotC; defect in organelle trafficking protein DotC
D YpsIP31758_B0112 putative lipoprotein K12205 dotD; defect in organelle trafficking protein DotD
D YpsIP31758_B0121 putative type IV secretion system protein IcmB/DotO K12206 icmB; intracellular multiplication protein IcmB [EC:7.2.4.8]
D YpsIP31758_B0116 putative type IV secretion system protein IcmE/DotG K12209 icmE; intracellular multiplication protein IcmE
D YpsIP31758_B0119 putative type IV secretion system protein IcmJ/DotN K12212 icmJ; intracellular multiplication protein IcmJ
D YpsIP31758_B0115 putative type IV secretion system protein IcmK/DotH K12213 icmK; intracellular multiplication protein IcmK
D YpsIP31758_B0114 putative type IV secretion system protein IcmL/DotI K12214 icmL; intracellular multiplication protein IcmL
D YpsIP31758_B0122 putative type IV secretion system protein IcmO/DotL K12217 icmO; intracellular multiplication protein IcmO [EC:7.2.4.8]
D YpsIP31758_B0104 type IV secretion system protein IcmP/DotM K12218 icmP; intracellular multiplication protein IcmP
D YpsIP31758_A0047 conjugal transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D YpsIP31758_A0048 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D YpsIP31758_A0049 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D YpsIP31758_A0050 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D YpsIP31758_A0051 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D YpsIP31758_A0052 conjugal transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D YpsIP31758_A0053 conjugal transfer protein TrbH K20267 trbH; type IV secretion system protein TrbH
D YpsIP31758_A0054 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D YpsIP31758_A0055 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D YpsIP31758_A0056 conjugal transfer protein TrbL/VirB6 K07344 trbL; type IV secretion system protein TrbL
D YpsIP31758_0673 putative autotransporter protein K12678 aidA-I; autotransporter family porin
D YpsIP31758_2585 putative haemagglutinin/invasin K12342 yadB_C; adhesin YadB/C
D YpsIP31758_2584 hypothetical protein K12342 yadB_C; adhesin YadB/C
D YpsIP31758_2045 haemolysin secretion/activation protein, ShlB/FhaC/HecB family K11017 shlB; hemolysin activation/secretion protein
D YpsIP31758_0300 hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YpsIP31758_0299 shlA; hemolysin K11016 shlA; hemolysin
D YpsIP31758_2044 adhesin/haemagluttinin repeat protein K11016 shlA; hemolysin
D YpsIP31758_1373 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_0326 putative lipoprotein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_2495 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_3421 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_0795 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YpsIP31758_0321 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_1372 OmpA domain protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_2508 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_0780 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_0729 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_3422 OmpA domain protein K11892 impK; type VI secretion system protein ImpK
D YpsIP31758_0728 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YpsIP31758_2509 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YpsIP31758_0779 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YpsIP31758_1371 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YpsIP31758_0320 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YpsIP31758_3423 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YpsIP31758_1360 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YpsIP31758_0317 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YpsIP31758_0801 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YpsIP31758_2488 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YpsIP31758_3431 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YpsIP31758_0800 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YpsIP31758_0316 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YpsIP31758_1361 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YpsIP31758_2489 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YpsIP31758_3432 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YpsIP31758_1378 conserved hypothetical protein K11897 impF; type VI secretion system protein ImpF
D YpsIP31758_3433 conserved hypothetical protein K11897 impF; type VI secretion system protein ImpF
D YpsIP31758_1368 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YpsIP31758_0727 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YpsIP31758_2510 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YpsIP31758_0778 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YpsIP31758_0314 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YpsIP31758_3435 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YpsIP31758_1367 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YpsIP31758_0313 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YpsIP31758_2511 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YpsIP31758_0777 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YpsIP31758_0726 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YpsIP31758_3436 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YpsIP31758_1359 ImpA domain protein K11902 impA; type VI secretion system protein ImpA
D YpsIP31758_3437 ImpA domain protein K11902 impA; type VI secretion system protein ImpA
D YpsIP31758_0312 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_1369 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_0731 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_3434 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_2506 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_0782 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YpsIP31758_0696 putative VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_2504 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0785 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_1374 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0339 putative VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0328 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_3429 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0788 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0733 type VI secretion system family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YpsIP31758_0803 conserved hypothetical protein K11905 K11905; type VI secretion system protein
D YpsIP31758_0315 conserved hypothetical protein K11905 K11905; type VI secretion system protein
D YpsIP31758_2486 conserved hypothetical protein K11905 K11905; type VI secretion system protein
D YpsIP31758_0802 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_0319 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_2487 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_1370 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_3424 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YpsIP31758_2505 ATPase, AAA family K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_1362 Clp protease-associated protein ClpB K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_0322 clpV2; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_3430 ATPase, AAA family K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_0732 clpV1; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D YpsIP31758_0796 ImpA domain protein K11910 vasJ; type VI secretion system protein VasJ
D YpsIP31758_0325 ImpA domain protein K11910 vasJ; type VI secretion system protein VasJ
D YpsIP31758_2492 ImpA domain protein K11910 vasJ; type VI secretion system protein VasJ
D YpsIP31758_0327 ImpA domain protein K11911 vasL; type VI secretion system protein VasL
D YpsIP31758_0805 ImpA domain protein K11911 vasL; type VI secretion system protein VasL
D YpsIP31758_2485 ImpA domain protein K11911 vasL; type VI secretion system protein VasL
D YpsIP31758_0318 FHA domain protein K11894 impI; type VI secretion system protein ImpI
D YpsIP31758_1377 ImpE family protein K11898 impE; type VI secretion system protein ImpE
D YpsIP31758_0324 conserved hypothetical protein K11909 vasI; type VI secretion system protein VasI
D YpsIP31758_0171 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_1675 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_1678 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_1363 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_2163 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_0170 gram-negative pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_1664 pilus assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_1679 gram-negative pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_0169 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1663 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1677 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1365 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_2676 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_2165 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1666 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1661 spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1665 conserved hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1667 conserved hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_0614 fimbrial usher protein K12518 papC; outer membrane usher protein PapC
D YpsIP31758_4106 fimbrial usher protein K12518 papC; outer membrane usher protein PapC
D YpsIP31758_0615 papD; chaperone protein PapD K12519 papD; chaperone protein PapD
D YpsIP31758_3378 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YpsIP31758_0078 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D YpsIP31758_3121 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YpsIP31758_3866 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D YpsIP31758_3120 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YpsIP31758_3599 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D YpsIP31758_3379 secM; secretion monitor protein SecM K13301 secM; secretion monitor
D YpsIP31758_3894 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D YpsIP31758_3230 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YpsIP31758_0239 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D YpsIP31758_3122 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D YpsIP31758_4157 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YpsIP31758_0274 tatA1; twin arginine-targeting protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA
D YpsIP31758_0275 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D YpsIP31758_0276 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D YpsIP31758_2956 tatA2; twin arginine-targeting protein translocase TatA K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:ypi02042]
D YpsIP31758_3751 conserved hypothetical protein K19298 subB; subtilase cytotoxin, subunit B
D YpsIP31758_0407 putative insecticidal toxin complex protein K11021 tccC; insecticidal toxin complex protein TccC
D YpsIP31758_0408 putative insecticidal toxin complex protein K11021 tccC; insecticidal toxin complex protein TccC
D YpsIP31758_0406 putative insecticidal toxin complex protein K11021 tccC; insecticidal toxin complex protein TccC
D YpsIP31758_0409 putative insecticial toxin complex protein K11021 tccC; insecticidal toxin complex protein TccC
D YpsIP31758_1823 putative toxin protein K11021 tccC; insecticidal toxin complex protein TccC
D YpsIP31758_3627 CBS/transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YpsIP31758_3232 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YpsIP31758_0299 shlA; hemolysin K11016 shlA; hemolysin
D YpsIP31758_2044 adhesin/haemagluttinin repeat protein K11016 shlA; hemolysin
D YpsIP31758_2045 haemolysin secretion/activation protein, ShlB/FhaC/HecB family K11017 shlB; hemolysin activation/secretion protein
D YpsIP31758_0300 hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YpsIP31758_0870 hemolysin III family protein K11068 hlyIII; hemolysin III
D YpsIP31758_1858 ypmA; superantigen YpmA K11010 ympA; superantigen YpmA
C 02022 Two-component system [BR:ypi02022]
D YpsIP31758_3135 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YpsIP31758_3136 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D YpsIP31758_1304 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D YpsIP31758_1607 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YpsIP31758_1608 phoP; transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YpsIP31758_3979 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YpsIP31758_3980 ompR; transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D YpsIP31758_1825 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YpsIP31758_1826 rstA; transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D YpsIP31758_0083 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YpsIP31758_0084 cpxR2; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YpsIP31758_0876 creC; sensor protein CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YpsIP31758_0875 creB; transcriptional regulatory protein CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D YpsIP31758_1211 baeS; signal transduction histidine-protein kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YpsIP31758_1210 baeR; transcriptional regulatory protein BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D YpsIP31758_3608 basS; sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YpsIP31758_3607 basR; transcriptional regulatory protein BasR/PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D YpsIP31758_2085 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YpsIP31758_2084 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YpsIP31758_1103 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YpsIP31758_1102 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YpsIP31758_0469 putative aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YpsIP31758_3478 DNA-binding response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D YpsIP31758_1314 sensor histidine kinase CpxA K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YpsIP31758_1313 cpxR1; transcriptional regulatory protein CpxR K02483 K02483; two-component system, OmpR family, response regulator
D YpsIP31758_2123 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YpsIP31758_1270 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D YpsIP31758_4079 uhpB; sensor histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YpsIP31758_4080 uhpA; transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D YpsIP31758_2402 DNA-binding response regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D YpsIP31758_2765 rcsC; sensor kinase protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YpsIP31758_2763 sensor histidine kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YpsIP31758_2764 rcsB; capsular synthesis regulator component B K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D YpsIP31758_3322 barA; signal transduction histidine-protein kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YpsIP31758_2253 uvrY; response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YpsIP31758_2161 sensor histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YpsIP31758_2160 DNA-binding response regulator, LuxR family K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YpsIP31758_4007 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YpsIP31758_3221 LytTr DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D YpsIP31758_0026 ntrB; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YpsIP31758_0025 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D YpsIP31758_2821 sensory box histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D YpsIP31758_2820 zraR; transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG
D YpsIP31758_1150 Putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YpsIP31758_1152 sigma-54 dependent DNA-binding response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YpsIP31758_1638 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YpsIP31758_1646 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YpsIP31758_1645 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YpsIP31758_3832 putative sensor histidine kinase/response regulator EsrA K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D YpsIP31758_3833 putative DNA-binding response regulator EsrB K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D YpsIP31758_0629 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D YpsIP31758_1969 response regulator K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:ypi02035]
D YpsIP31758_1638 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YpsIP31758_1639 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YpsIP31758_1644 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YpsIP31758_1645 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YpsIP31758_1646 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YpsIP31758_1647 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D YpsIP31758_1492 methyl-accepting chemotaxis transducer/sensory box protein K03406 mcp; methyl-accepting chemotaxis protein
D YpsIP31758_2753 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YpsIP31758_1642 tar; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YpsIP31758_0967 tsr; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YpsIP31758_4122 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YpsIP31758_1631 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YpsIP31758_1643 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YpsIP31758_1618 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YpsIP31758_2292 fliH2; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YpsIP31758_0633 fliH1; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YpsIP31758_2293 fliI1; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YpsIP31758_0634 fliI2; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YpsIP31758_2294 fliJ1; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D YpsIP31758_2301 fliO; flagellar protein fliO K02418 fliO; flagellar protein FliO/FliZ
D YpsIP31758_2302 fliP2; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YpsIP31758_0626 fliP1; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YpsIP31758_2303 fliQ1; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YpsIP31758_0625 fliQ2; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YpsIP31758_2304 fliR1; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YpsIP31758_0624 fliR2; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YpsIP31758_2333 flhA1; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YpsIP31758_0622 flhA2; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YpsIP31758_2334 flhB1; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YpsIP31758_0623 flhB2; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YpsIP31758_2332 flhE; flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D YpsIP31758_2291 fliG1; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YpsIP31758_0632 fliG2; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YpsIP31758_2299 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YpsIP31758_0628 lateral flagellar export/assembly protein K02416 fliM; flagellar motor switch protein FliM
D YpsIP31758_2300 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YpsIP31758_0627 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YpsIP31758_0631 fliF2; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D YpsIP31758_2290 fliF1; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D YpsIP31758_2317 flgI2; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D YpsIP31758_0646 flgI1; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D YpsIP31758_2325 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YpsIP31758_0638 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YpsIP31758_2318 flgH1; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D YpsIP31758_0645 flgH2; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D YpsIP31758_2298 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D YpsIP31758_0659 putative flagellar protein K02415 fliL; flagellar protein FliL
D YpsIP31758_2289 fliE1; flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE
D YpsIP31758_0630 fliE2; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D YpsIP31758_2295 fliK1; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D YpsIP31758_0658 fliK2; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D YpsIP31758_2324 flgB2; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D YpsIP31758_0639 flgB1; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D YpsIP31758_2323 flgC1; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D YpsIP31758_0640 flgC2; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D YpsIP31758_2322 flgD1; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YpsIP31758_0641 flgD2; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YpsIP31758_2320 flgF2; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YpsIP31758_0643 flgF1; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YpsIP31758_2319 flgG2; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YpsIP31758_0644 flgG1; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YpsIP31758_2316 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D YpsIP31758_0647 putative lateral flagellar peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D YpsIP31758_2321 flgE1; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D YpsIP31758_0642 flgE2; flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D YpsIP31758_2314 flgK1; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D YpsIP31758_0648 flgK2; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D YpsIP31758_2313 flgL1; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D YpsIP31758_0649 flgL2; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D YpsIP31758_2328 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YpsIP31758_0636 putative flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YpsIP31758_1231 fliB family protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D YpsIP31758_0653 flagellin K02406 fliC; flagellin
D YpsIP31758_0654 flagellin K02406 fliC; flagellin
D YpsIP31758_2281 flagellin K02406 fliC; flagellin
D YpsIP31758_2283 fliD2; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D YpsIP31758_0655 fliD1; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D YpsIP31758_2284 fliS2; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YpsIP31758_0656 fliS1; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YpsIP31758_2285 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D YpsIP31758_1634 flhD; flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D YpsIP31758_1635 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D YpsIP31758_2280 fliA1; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YpsIP31758_0660 fliA2; flagellar operon sigma factor, sigma-28 K02405 fliA; RNA polymerase sigma factor FliA
D YpsIP31758_1636 motA1; chemotaxis protein motA K02556 motA; chemotaxis protein MotA
D YpsIP31758_0661 motA2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D YpsIP31758_1637 motB1; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YpsIP31758_0662 motB2; flagellar motor protein B K02557 motB; chemotaxis protein MotB
D YpsIP31758_0629 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D YpsIP31758_2274 fliY; cystine-binding periplasmic protein FliY K02424 tcyA; L-cystine transport system substrate-binding protein
D YpsIP31758_2278 fliZ; protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D YpsIP31758_2327 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YpsIP31758_0637 putative anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D YpsIP31758_0831 twitching motility protein K02669 pilT; twitching motility protein PilT
D YpsIP31758_1184 pilF; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D YpsIP31758_0603 type IV prepilin peptidase family K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YpsIP31758_0602 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D YpsIP31758_0601 type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D YpsIP31758_0600 conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YpsIP31758_0599 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YpsIP31758_0171 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_1675 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_1678 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_1363 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_2163 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YpsIP31758_0170 gram-negative pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_1664 pilus assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_1679 gram-negative pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D YpsIP31758_0169 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1663 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1677 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1365 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_2676 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_2165 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YpsIP31758_1666 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1661 spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1665 conserved hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YpsIP31758_1667 conserved hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ypi04812]
D YpsIP31758_0398 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YpsIP31758_B0106 plasmid stability protein StbA family protein K18640 parM; plasmid segregation protein ParM
D YpsIP31758_3382 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YpsIP31758_3383 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D YpsIP31758_2010 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D YpsIP31758_2011 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D YpsIP31758_2012 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D YpsIP31758_A0038 plasmid partition protein K03496 parA; chromosome partitioning protein
D YpsIP31758_B0108 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D YpsIP31758_A0037 transcription repressor protein KorB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YpsIP31758_0771 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ypi04147]
D YpsIP31758_3055 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YpsIP31758_3316 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YpsIP31758_1987 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YpsIP31758_0849 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YpsIP31758_1749 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YpsIP31758_2024 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YpsIP31758_3950 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YpsIP31758_3126 antioxidant, AhpC/TSA family K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D YpsIP31758_3675 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YpsIP31758_3466 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YpsIP31758_0302 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YpsIP31758_1194 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YpsIP31758_3867 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D YpsIP31758_3918 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D YpsIP31758_1588 hinT; histidine triad nucleotide-binding protein HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YpsIP31758_1880 putative sodium/bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D YpsIP31758_3402 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_2014 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YpsIP31758_3054 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YpsIP31758_4088 putative phosphoribosyl transferase protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YpsIP31758_3060 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YpsIP31758_0129 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YpsIP31758_2408 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YpsIP31758_2788 aromatic amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YpsIP31758_3621 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YpsIP31758_2857 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YpsIP31758_4006 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YpsIP31758_0101 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YpsIP31758_3247 carbohydrate kinase, FGGY family K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YpsIP31758_0027 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YpsIP31758_0278 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YpsIP31758_1835 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YpsIP31758_0856 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YpsIP31758_2694 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YpsIP31758_3843 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YpsIP31758_0135 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_3360 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YpsIP31758_2022 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YpsIP31758_0096 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YpsIP31758_2861 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ypi02048]
D YpsIP31758_1535 cas1; crispr-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D YpsIP31758_1536 crispr-associated helicase Cas3, yersinia-type K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D YpsIP31758_1537 crispr-associated protein, Csy1 family K19127 csy1; CRISPR-associated protein Csy1
D YpsIP31758_1538 crispr-associated protein, Csy2 family K19128 csy2; CRISPR-associated protein Csy2
D YpsIP31758_1539 crispr-associated protein, Csy3 family K19129 csy3; CRISPR-associated protein Csy3
D YpsIP31758_1540 crispr-associated protein, Csy4 family K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D YpsIP31758_3538 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D YpsIP31758_3537 putative type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D YpsIP31758_3536 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D YpsIP31758_3963 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YpsIP31758_0336 conserved hypothetical protein K19048 symE; toxic protein SymE
D YpsIP31758_B0073 ChpR family protein K07172 mazE; antitoxin MazE
D YpsIP31758_2227 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D YpsIP31758_2226 addiction module antitoxin, RelB/DinJ family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D YpsIP31758_0357 dinJ; DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D YpsIP31758_1336 conserved hypothetical protein K18843 hicB; antitoxin HicB
D YpsIP31758_3073 haemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D YpsIP31758_B0044 haemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D YpsIP31758_B0060 virulence modulating protein K05839 hha; haemolysin expression modulating protein
D YpsIP31758_3072 conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB
D YpsIP31758_1788 pspC; phage shock protein C K03973 pspC; phage shock protein C
D YpsIP31758_1787 pspB; phage shock protein B K03970 pspB; phage shock protein B
D YpsIP31758_0888 conserved hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D YpsIP31758_0889 putative transcriptional regulator K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D YpsIP31758_3550 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D YpsIP31758_1468 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D YpsIP31758_1565 conserved hypothetical protein K12148 bssS; biofilm regulator BssS
D YpsIP31758_3382 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YpsIP31758_0398 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YpsIP31758_0581 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YpsIP31758_0578 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YpsIP31758_1325 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YpsIP31758_B0134 conserved hypothetical protein K19167 abiQ; protein AbiQ
D YpsIP31758_0748 conserved hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D YpsIP31758_0747 conserved hypothetical protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D YpsIP31758_0874 conserved hypothetical protein K19168 cptA; toxin CptA
D YpsIP31758_0873 conserved hypothetical protein K09159 cptB; antitoxin CptB
D YpsIP31758_1168 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YpsIP31758_2004 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:ypi04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ypi04090]
C 01504 Antimicrobial resistance genes [BR:ypi01504]
D YpsIP31758_B0066 putative membrane protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D YpsIP31758_4110 mdfA; multidrug translocase MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D YpsIP31758_2085 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YpsIP31758_2084 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YpsIP31758_1607 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YpsIP31758_1608 phoP; transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YpsIP31758_3586 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_3067 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D YpsIP31758_3068 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D YpsIP31758_3585 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D YpsIP31758_0668 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D YpsIP31758_3584 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system
D YpsIP31758_3026 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YpsIP31758_0573 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D YpsIP31758_2559 ompF; outer membrane protein F K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:ypi00536]
D YpsIP31758_1519 haemagglutinin/adhesin repeat protein K15125 fhaB; filamentous hemagglutinin
D YpsIP31758_0510 adhesin/haemagluttinin repeat protein K15125 fhaB; filamentous hemagglutinin
D YpsIP31758_0514 conserved hypothetical protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ypi00537]
D YpsIP31758_1835 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ypi03100]
D YpsIP31758_4205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4264 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4292 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4221 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4222 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YpsIP31758_4261 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4199 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4227 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4268 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4269 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4267 pseudogene K14219 tRNA-Arg; tRNA Arg
D YpsIP31758_4235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YpsIP31758_4241 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YpsIP31758_4240 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YpsIP31758_4197 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YpsIP31758_4219 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YpsIP31758_4220 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YpsIP31758_4237 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D YpsIP31758_4257 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YpsIP31758_4258 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YpsIP31758_4260 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YpsIP31758_4190 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YpsIP31758_4194 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YpsIP31758_4216 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YpsIP31758_4284 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YpsIP31758_4287 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4211 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4238 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4278 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4279 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YpsIP31758_4200 tRNA-His K14226 tRNA-His; tRNA His
D YpsIP31758_4204 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YpsIP31758_4293 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YpsIP31758_4265 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YpsIP31758_4277 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4256 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4201 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4273 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4272 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4274 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4236 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YpsIP31758_4226 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4253 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4251 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4250 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4252 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4239 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4248 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4246 pseudogene K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4249 pseudogene K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4247 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YpsIP31758_4255 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4259 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4209 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4212 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4213 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4214 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4276 tRNA-Met K14230 tRNA-Met; tRNA Met
D YpsIP31758_4210 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YpsIP31758_4281 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YpsIP31758_4202 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YpsIP31758_4295 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YpsIP31758_4243 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YpsIP31758_4242 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4271 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4233 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4234 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YpsIP31758_4286 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YpsIP31758_4207 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YpsIP31758_4244 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YpsIP31758_4289 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YpsIP31758_4198 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D YpsIP31758_4231 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YpsIP31758_4232 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YpsIP31758_4288 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YpsIP31758_4223 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4224 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4225 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4228 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4229 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4230 tRNA-Val K14237 tRNA-Val; tRNA Val
D YpsIP31758_4296 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D YpsIP31758_4193 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4285 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4189 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4266 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4203 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4215 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4294 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YpsIP31758_4263 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4291 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4206 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4195 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4283 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4191 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4217 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YpsIP31758_4192 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4262 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4218 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4196 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4290 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4282 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4208 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YpsIP31758_4322 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D YpsIP31758_4302 RNase P class A K01978 rnpB; M1 RNA
D YpsIP31758_4254 10Sa RNA (tmRNA) K15035 ssrA; transfer-messenger RNA
D YpsIP31758_4321 sroB; sroB RNA K18503 chiX; small regulatory RNA ChiX
D YpsIP31758_4301 SraH RNA K18504 arcZ; small regulatory RNA ArcZ
D YpsIP31758_4309 tke1 RNA K15841 glmY; small regulatory RNA GlmY
D YpsIP31758_4329 RyhB RNA K18507 ryhB; small regulatory RNA RyhB
D YpsIP31758_4313 RyhB RNA K18507 ryhB; small regulatory RNA RyhB
D YpsIP31758_4317 rybB; rybB RNA K18508 rybB; small regulatory RNA RybB
D YpsIP31758_4323 sraD; sraD RNA K18511 micA; small regulatory RNA MicA
D YpsIP31758_4307 CsrB/RsmB RNA family K18515 csrB; small regulatory RNA CsrB
D YpsIP31758_4298 CsrC RNA family K18516 csrC; small regulatory RNA CsrC
D YpsIP31758_4312 rprA; rprA RNA K18518 rprA; small regulatory RNA RprA
D YpsIP31758_4311 RyeE RNA K18520 cyaR; small regulatory RNA CyaR
D YpsIP31758_4306 gcvB; gcvB RNA K18521 gcvB; small regulatory RNA GcvB
D YpsIP31758_4305 sraE/rygA/rygB family RNA K18522 omrA; small regulatory RNA OmrA
D YpsIP31758_4297 spf; Spot 42 RNA K18527 spf; small regulatory RNA Spot 42
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D YpsIP31758_1470 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D YpsIP31758_0586 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YpsIP31758_2998 oxidoreductase, aldo/keto reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YpsIP31758_1048 dkgB; 2,5-diketo-D-gluconic acid reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D YpsIP31758_1902 NAD dependent epimerase/dehydratase family protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D YpsIP31758_2422 alcohol dehydrogenase, iron-containing K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D YpsIP31758_1329 oxidoreductase, aldo/keto reductase family K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D YpsIP31758_1506 oxidoreductase, zinc-binding dehydrogenase family protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D YpsIP31758_3288 oxidoreductase, zinc-binding dehydrogenase family K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D YpsIP31758_3776 putative oxidoreductase, FAD-binding K26080 E1.1.3.29; N-acylhexosamine oxidase [EC:1.1.3.29]
D YpsIP31758_1541 oxidoreductase, aldo/keto reductase family K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D YpsIP31758_0501 fadH; 2,4-dienoyl-coa reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D YpsIP31758_1564 solA; N-methyl-L-tryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D YpsIP31758_3766 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YpsIP31758_1628 putative NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YpsIP31758_0580 putative NADH-quinone reductase mdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D YpsIP31758_1814 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D YpsIP31758_3626 msrA; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D YpsIP31758_1986 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D YpsIP31758_0370 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D YpsIP31758_0479 glutathione S-transferase domain protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D YpsIP31758_0395 yedY; yedY protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D YpsIP31758_3256 cytochrome b561 family protein K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D YpsIP31758_3278 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D YpsIP31758_1245 bcp; peroxiredoxin, bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YpsIP31758_1795 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YpsIP31758_1292 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D YpsIP31758_4023 YhhW family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YpsIP31758_1995 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YpsIP31758_1157 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D YpsIP31758_1516 rieske 2Fe-2S domain protein K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D YpsIP31758_1517 oxidoreductase FAD/NAD binding/2Fe-2S iron-sulfur cluster binding domain protein K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239]
D YpsIP31758_2341 ferritin family protein K02217 ftnA; ferritin [EC:1.16.3.2]
D YpsIP31758_3352 cueO; blue copper oxidase CueO K14588 cueO; cuproxidase [EC:1.16.3.4]
D YpsIP31758_0099 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D YpsIP31758_1238 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D YpsIP31758_3557 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D YpsIP31758_2591 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D YpsIP31758_2618 hcr; NADH oxidoreductase Hcr K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D YpsIP31758_3295 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D YpsIP31758_1752 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D YpsIP31758_1498 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D YpsIP31758_2133 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D YpsIP31758_3797 radical SAM domain/HemN domain protein K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D YpsIP31758_2919 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D YpsIP31758_3579 acetyltransferase, GNAT family K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D YpsIP31758_4133 acetyltransferase, GNAT family K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D YpsIP31758_3546 acetyltransferase, GNAT family K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D YpsIP31758_0172 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D YpsIP31758_2603 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D YpsIP31758_0526 conserved hypothetical protein K21298 E2.4.1.333; 1,2-beta-oligoglucan phosphorylase [EC:2.4.1.333]
D YpsIP31758_1530 conserved hypothetical protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D YpsIP31758_3205 DTW domain protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D YpsIP31758_0983 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D YpsIP31758_3160 putative thiamine biosynthesis lipoprotein apbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D YpsIP31758_2748 conserved hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D YpsIP31758_1736 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D YpsIP31758_0563 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D YpsIP31758_1734 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D YpsIP31758_0296 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D YpsIP31758_2872 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YpsIP31758_1930 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D YpsIP31758_1402 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D YpsIP31758_2710 rtn; protein rtn K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D YpsIP31758_4069 putative diguanylate cyclase/cyclic diguanylate phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D YpsIP31758_0931 sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YpsIP31758_1263 sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YpsIP31758_0945 sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YpsIP31758_0839 endA; endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D YpsIP31758_0277 tatD; deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YpsIP31758_3500 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YpsIP31758_1585 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YpsIP31758_2898 esterase, DmpD/TodF/XylF family K01175 ybfF; esterase [EC:3.1.-.-]
D YpsIP31758_3152 yafA; esterase YafA K11750 frsA; esterase FrsA [EC:3.1.-.-]
D YpsIP31758_4070 bcsZ; endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D YpsIP31758_2236 conserved hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D YpsIP31758_0917 glycosyl hydrolase, family 53 K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D YpsIP31758_1649 N-acetylmuramoyl-L-alanine amidase, family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YpsIP31758_3882 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D YpsIP31758_2405 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D YpsIP31758_1095 chbG; UPF0249 protein ChbG K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D YpsIP31758_2348 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D YpsIP31758_0434 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D YpsIP31758_0562 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D YpsIP31758_3083 HAD hydrolase, IIB family K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D YpsIP31758_1276 hydrolase, NUDIX family K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D YpsIP31758_1571 maf1; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D YpsIP31758_0005 putative ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D YpsIP31758_2747 class II aldolase/adducin N-terminal domain protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D YpsIP31758_1908 putative fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D YpsIP31758_3658 YjeF family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D YpsIP31758_0946 polysaccharide lyase, family 8 K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21]
D YpsIP31758_0998 csdA; cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D YpsIP31758_2260 kelch domain protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D YpsIP31758_3759 rhaU; L-rhamnose 1-epimerase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D YpsIP31758_2745 AP endonuclease, family 2 K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D YpsIP31758_3620 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D YpsIP31758_1898 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D YpsIP31758_1896 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D YpsIP31758_1895 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D YpsIP31758_3166 nqrA; NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D YpsIP31758_3165 nqrB; NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D YpsIP31758_3164 nqrC; NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D YpsIP31758_3163 nqrD; NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D YpsIP31758_3162 nqrE2; NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D YpsIP31758_2149 nqrE1; NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D YpsIP31758_3161 nqrF; NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D YpsIP31758_0233 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D YpsIP31758_1633 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D YpsIP31758_3337 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D YpsIP31758_4120 aerobic formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D YpsIP31758_1173 fdx; ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D YpsIP31758_2771 iron-sulfur cluster-binding protein K11107 yfaE; ferredoxin
D YpsIP31758_1899 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D YpsIP31758_1900 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D YpsIP31758_1894 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D YpsIP31758_3683 iron-sulfur cluster-binding protein K05796 hydN; electron transport protein HydN
D YpsIP31758_0001 mioC; MioC protein K06205 mioC; MioC protein
D YpsIP31758_0878 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D YpsIP31758_1169 iscU; FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D YpsIP31758_0428 cytochrome b562 K15536 cybC; soluble cytochrome b562
D YpsIP31758_3255 cytochrome b562 K15536 cybC; soluble cytochrome b562
D YpsIP31758_1272 napD; NapD protein K02570 napD; periplasmic nitrate reductase NapD
D YpsIP31758_1271 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D YpsIP31758_2901 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D YpsIP31758_1275 napC; periplasmic nitrate reductase, cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
D YpsIP31758_3643 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D YpsIP31758_1064 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D YpsIP31758_1319 putative protein CysZ K06203 cysZ; CysZ protein
D YpsIP31758_1030 glyoxalase family protein K08234 yaeR; glyoxylase I family protein
D YpsIP31758_1797 conserved hypothetical protein K14054 mpaA; murein peptide amidase A
D YpsIP31758_0830 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D YpsIP31758_1916 putative membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D YpsIP31758_1915 tetratricopeptide repeat protein K19804 lapB; lipopolysaccharide assembly protein B
D YpsIP31758_2590 LPS glycosyltransferase family protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D YpsIP31758_0195 hemY; hemY protein K02498 hemY; HemY protein
D YpsIP31758_0273 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D YpsIP31758_0272 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D YpsIP31758_0566 conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D YpsIP31758_3580 SCP-2 sterol transfer family protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D YpsIP31758_0016 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D YpsIP31758_0678 AbgT family protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D YpsIP31758_0583 SufI protein K04753 sufI; suppressor of ftsI
D YpsIP31758_B0067 putative oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D YpsIP31758_0480 DoxX family protein K15977 K15977; putative oxidoreductase
D YpsIP31758_3206 putative acyl-CoA synthetase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D YpsIP31758_0424 barstar K03623 yhcO; ribonuclease inhibitor
D YpsIP31758_2574 cold shock DNA-binding domain protein K03704 cspA; cold shock protein
D YpsIP31758_2958 cold shock DNA-binding domain protein K03704 cspA; cold shock protein
D YpsIP31758_0374 'Cold-shock' DNA-binding domain K03704 cspA; cold shock protein
D YpsIP31758_0375 cold shock DNA-binding domain protein K03704 cspA; cold shock protein
D YpsIP31758_0376 cold shock DNA-binding domain protein K03704 cspA; cold shock protein
D YpsIP31758_1070 cold shock protein K03704 cspA; cold shock protein
D YpsIP31758_2609 cspD; cold shock domain protein CspD K03704 cspA; cold shock protein
D YpsIP31758_3852 rsd; regulator of sigma D K07740 rsd; regulator of sigma D
D YpsIP31758_3078 glnK; glutamine synthetase regulation protein K04752 glnK; nitrogen regulatory protein P-II 2
D YpsIP31758_3982 conserved hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D YpsIP31758_1807 hslJ; heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D YpsIP31758_2607 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D YpsIP31758_3093 tig; trigger factor K03545 tig; trigger factor
D YpsIP31758_0394 membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D YpsIP31758_4116 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D YpsIP31758_1080 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D YpsIP31758_1081 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D YpsIP31758_1082 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D YpsIP31758_1083 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D YpsIP31758_2893 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D YpsIP31758_1065 nrdH; glutaredoxin-related protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D YpsIP31758_0153 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D YpsIP31758_0966 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D YpsIP31758_0545 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D YpsIP31758_3944 OsmC family protein K07397 yhfA; putative redox protein
D YpsIP31758_3990 hesB-like domain/nifU-like domain protein K07400 nfuA; Fe/S biogenesis protein NfuA
D YpsIP31758_3828 type III secretion system protein, YseE family K18984 ssaE; secretion system chaperone SsaE
C 99976 Replication and repair
D YpsIP31758_3074 methylated-DNA-[protein]-cysteine S-methyltransferase family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D YpsIP31758_1002 xni; exodeoxyribonuclease-9 K01146 xni; protein Xni
D YpsIP31758_0061 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D YpsIP31758_0750 DNA repair protein, RadC family K03630 radC; DNA repair protein RadC
D YpsIP31758_0270 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D YpsIP31758_2614 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D YpsIP31758_0474 conserved hypothetical protein K07460 yraN; putative endonuclease
D YpsIP31758_3578 GIY-YIG domain protein K07461 K07461; putative endonuclease
D YpsIP31758_3881 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D YpsIP31758_0046 putative phage terminase, small subunit K07474 xtmA; phage terminase small subunit
D YpsIP31758_2228 conserved hypothetical protein K07474 xtmA; phage terminase small subunit
D YpsIP31758_0552 hypothetical protein K07474 xtmA; phage terminase small subunit
D YpsIP31758_2594 rarA; replication/recombination-associated protein RarA K07478 ycaJ; putative ATPase
D YpsIP31758_3879 topoisomerase DNA binding C4 zinc finger domain protein K07479 yrdD; putative DNA topoisomerase
D YpsIP31758_0049 conserved domain protein K06919 K06919; putative DNA primase/helicase
D YpsIP31758_0890 nucleoside triphosphatase, D5 family K06919 K06919; putative DNA primase/helicase
D YpsIP31758_A0020 DNA primase TraC K06919 K06919; putative DNA primase/helicase
D YpsIP31758_0741 IS1 family transposase orfB K07480 insB; insertion element IS1 protein InsB
D YpsIP31758_0740 IS1 family transposase orfA K07489 K07489; transposase
D YpsIP31758_0735 IS1 family transposase orfA K07489 K07489; transposase
D YpsIP31758_1768 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_0181 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_0496 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_1673 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_1725 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_2543 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_3224 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_3413 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_3858 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_3905 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_1967 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_2877 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_3127 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_3398 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_3869 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YpsIP31758_0015 IS285, transposase K07493 K07493; putative transposase
D YpsIP31758_0291 IS285, transposase K07493 K07493; putative transposase
D YpsIP31758_2896 transposase K07497 K07497; putative transposase
D YpsIP31758_2077 IS3 family transposase, orfB K07497 K07497; putative transposase
D YpsIP31758_4044 IS3 family transposase, orfB K07497 K07497; putative transposase
D YpsIP31758_B0048 transposase, truncation K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D YpsIP31758_1786 pspA; phage shock protein A K03969 pspA; phage shock protein A
D YpsIP31758_1789 pspD; phage shock protein D K03971 pspD; phage shock protein D
D YpsIP31758_3058 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D YpsIP31758_0194 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D YpsIP31758_1515 transporter, betaine/carnitine/choline transporter (BCCT) family protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D YpsIP31758_1778 proton dependent peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D YpsIP31758_1555 proton dependent peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D YpsIP31758_1309 transporter, solute:sodium symporter (SSS) family K03307 TC.SSS; solute:Na+ symporter, SSS family
D YpsIP31758_3133 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D YpsIP31758_1056 permease, cytosine/purines, uracil, thiamine, allantoin family K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D YpsIP31758_3499 nucleoside transporter, NupC family K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D YpsIP31758_0092 transporter, divalent anion:Na+ symporter (DASS) family K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D YpsIP31758_4141 putative transport protein YidE K07085 K07085; putative transport protein
D YpsIP31758_2649 putative transport protein K07085 K07085; putative transport protein
C 99978 Cell growth
D YpsIP31758_1944 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D YpsIP31758_0230 putative lipoprotein K27311 dcrB; inner membrane lipoprotein DcrB
D YpsIP31758_3632 hemerythrin HHE cation binding domain protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D YpsIP31758_1998 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D YpsIP31758_0074 peptidase, M23 family domain protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D YpsIP31758_1590 putative lipoprotein K07337 K07337; penicillin-binding protein activator
D YpsIP31758_2539 tfoX; DNA transformation protein tfoX K07343 tfoX; DNA transformation protein and related proteins
D YpsIP31758_1676 fimbrial assembly chaperone protein K15540 ecpD; chaperone protein EcpD
D YpsIP31758_1364 gram-negative pili assembly chaperone K15540 ecpD; chaperone protein EcpD
D YpsIP31758_1005 syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D YpsIP31758_3367 AmpE-like protein K03807 ampE; AmpE protein
D YpsIP31758_3788 terA; tellurite resistance protein K05792 terA; tellurite resistance protein TerA
D YpsIP31758_3784 terE; tellurium resistance protein K05795 terD; tellurium resistance protein TerD
D YpsIP31758_3785 terD; tellurium resistance protein K05795 terD; tellurium resistance protein TerD
D YpsIP31758_3789 terZ; tellurium resistance protein K05791 terZ; tellurium resistance protein TerZ
D YpsIP31758_1671 proQ; ProP effector K03607 proQ; ProP effector
D YpsIP31758_4035 universal stress protein A K06149 uspA; universal stress protein A
D YpsIP31758_1832 uspE; universal stress protein E K14055 uspE; universal stress protein E
D YpsIP31758_1905 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D YpsIP31758_0268 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D YpsIP31758_0028 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D YpsIP31758_2125 putative phoH protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YpsIP31758_2916 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YpsIP31758_1991 PrkA serine protein kinase K07180 prkA; serine protein kinase
D YpsIP31758_0561 conserved hypothetical protein K07184 ygiM; SH3 domain protein
D YpsIP31758_3494 putative membrane protein Smp K07186 smp; membrane protein
D YpsIP31758_3104 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D YpsIP31758_2595 lolA; outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D YpsIP31758_2068 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D YpsIP31758_1396 vacJ; lipoprotein VacJ K04754 mlaA; phospholipid-binding lipoprotein MlaA
D YpsIP31758_0183 chain length determinant family protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D YpsIP31758_1769 pcp2; outer membrane lipoprotein Pcp K06077 slyB; outer membrane lipoprotein SlyB
D YpsIP31758_0665 pcP; outer membrane lipoprotein PcP K06077 slyB; outer membrane lipoprotein SlyB
D YpsIP31758_0378 pcp1; outer membrane lipoprotein PcP K06077 slyB; outer membrane lipoprotein SlyB
D YpsIP31758_1022 skp; chaperone protein Skp K06142 hlpA; outer membrane protein
D YpsIP31758_3294 nlpD; lipoprotein nlpD K06194 nlpD; lipoprotein NlpD
D YpsIP31758_3591 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D YpsIP31758_1940 outer membrane protein, OmpW family K07275 ompW; outer membrane protein
D YpsIP31758_3223 conserved hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D YpsIP31758_2015 outer membrane lipoprotein, Slp family K07285 slp; outer membrane lipoprotein
D YpsIP31758_3095 putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D YpsIP31758_2451 AsmA protein K07289 asmA; AsmA protein
D YpsIP31758_4058 AsmA family protein K07290 yhjG; AsmA family protein
D YpsIP31758_3025 nodulation efficiency protein D K07340 ybbJ; inner membrane protein
D YpsIP31758_2477 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D YpsIP31758_1561 putative membrane protein K11744 tqsA; AI-2 transport protein TqsA
D YpsIP31758_1911 putative lipoprotein K04062 osmB; osmotically inducible lipoprotein OsmB
D YpsIP31758_0877 inner membrane protein CreD K06143 creD; inner membrane protein
D YpsIP31758_1391 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D YpsIP31758_1394 putative cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D YpsIP31758_1185 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
D YpsIP31758_0419 conserved hypothetical protein K21695 aaeX; protein AaeX
D YpsIP31758_0502 putative membrane protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D YpsIP31758_4167 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D YpsIP31758_1552 mdoG; periplasmic glucans biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D YpsIP31758_3787 terB; tellurite resistance protein K05793 terB; tellurite resistance protein TerB
D YpsIP31758_3786 terC; tellurite resistance protein K05794 terC; tellurite resistance protein TerC
D YpsIP31758_3680 cutA; divalent-cation tolerance protein cutA K03926 cutA; periplasmic divalent cation tolerance protein
D YpsIP31758_2040 cutC; copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D YpsIP31758_3564 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D YpsIP31758_3445 apaG; apaG protein K06195 apaG; ApaG protein
D YpsIP31758_0203 cyaY protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D YpsIP31758_3802 hmuS; hemin transport protein HmuS K07225 hmuS; putative hemin transport protein
D YpsIP31758_3798 conserved hypothetical protein K07227 chuX; heme iron utilization protein
D YpsIP31758_3065 DsrE family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D YpsIP31758_1425 cvpA; colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D YpsIP31758_2549 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D YpsIP31758_2047 putative oxidoreductase K03810 mviM; virulence factor
D YpsIP31758_3208 putative lipoprotein K05811 yfiM; putative lipoprotein
D YpsIP31758_3503 osmY; Osmotically induced periplasmic protein OsmY K04065 osmY; hyperosmotically inducible periplasmic protein
D YpsIP31758_2053 putative phosphoesterase K04477 ycdX; putative hydrolase
D YpsIP31758_1122 grcA; autonomous glycyl radical cofactor K06866 grcA; autonomous glycyl radical cofactor
D YpsIP31758_3328 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D YpsIP31758_1741 sufA; FeS assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA
D YpsIP31758_1742 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D YpsIP31758_1744 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D YpsIP31758_1266 putative metal-dependent hydrolase, membrane-bound K07038 K07038; inner membrane protein
D YpsIP31758_1686 putative metal-dependent hydrolase, membrane-bound K07038 K07038; inner membrane protein
D YpsIP31758_0030 rbn; tRNA-processing ribonuclease BN K07058 K07058; membrane protein
D YpsIP31758_4056 ribonuclease BN-like family protein K07058 K07058; membrane protein
D YpsIP31758_3677 fxsA; protein fxsA K07113 fxsA; UPF0716 protein FxsA
D YpsIP31758_1746 sufE; cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D YpsIP31758_0997 Fe-S metabolism associated protein K02426 sufE; cysteine desulfuration protein SufE
D YpsIP31758_1560 rhodanese domain protein K07146 K07146; UPF0176 protein
D YpsIP31758_1611 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D YpsIP31758_2449 fhuF; ferric iron reductase protein FhuF K13255 fhuF; ferric iron reductase protein FhuF
D YpsIP31758_1382 LemA family protein K03744 lemA; LemA protein
D YpsIP31758_3927 slyX protein K03745 slyX; SlyX protein
D YpsIP31758_3880 smg; smg protein K03747 smg; Smg protein
D YpsIP31758_3479 creA; creA protein K05805 creA; CreA protein
D YpsIP31758_0840 sprT; sprT protein K02742 sprT; SprT protein
D YpsIP31758_1424 sporulation and cell division repeat protein K03749 dedD; DedD protein
D YpsIP31758_3964 putative DamX protein K03112 damX; DamX protein
D YpsIP31758_2464 putative sanA protein K03748 sanA; SanA protein
D YpsIP31758_1421 DedA protein K03975 dedA; membrane-associated protein
D YpsIP31758_1669 integral membrane protein, PqiA family K03808 pqiA; paraquat-inducible protein A
D YpsIP31758_2550 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D YpsIP31758_1479 conserved hypothetical protein K05594 elaB; ElaB protein
D YpsIP31758_1791 conserved hypothetical protein TIGR01620 K08990 ycjF; putative membrane protein
D YpsIP31758_0237 conserved hypothetical protein K08993 yhhL; putative membrane protein
D YpsIP31758_1970 SEC-C motif K09858 K09858; SEC-C motif domain protein
D YpsIP31758_3075 putative lipoprotein K09914 K09914; putative lipoprotein
D YpsIP31758_0310 malM; maltose operon periplasmic protein K05775 malM; maltose operon periplasmic protein
D YpsIP31758_0303 psiE; protein PsiE K13256 psiE; protein PsiE
D YpsIP31758_1380 phnA; alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D YpsIP31758_0671 putative enterotoxin K06867 K06867; uncharacterized protein
D YpsIP31758_1125 Ankyrin repeat protein K06867 K06867; uncharacterized protein
D YpsIP31758_3275 putative enterotoxin K06867 K06867; uncharacterized protein
D YpsIP31758_0932 putative sulfatase regulator K06871 K06871; uncharacterized protein
D YpsIP31758_2479 radical SAM domain protein K06871 K06871; uncharacterized protein
D YpsIP31758_1264 putative sulfatase regulator K06871 K06871; uncharacterized protein
D YpsIP31758_2983 conserved hypothetical protein K06887 K06887; uncharacterized protein
D YpsIP31758_1346 conserved hypothetical protein K06887 K06887; uncharacterized protein
D YpsIP31758_1198 conserved hypothetical protein K06887 K06887; uncharacterized protein
D YpsIP31758_0047 conserved domain protein K06887 K06887; uncharacterized protein
D YpsIP31758_2725 HNH endonuclease domain protein K06887 K06887; uncharacterized protein
D YpsIP31758_0549 HNH endonuclease domain protein K06887 K06887; uncharacterized protein
D YpsIP31758_3640 phospholipase/carboxylesterase family protein K06889 K06889; uncharacterized protein
D YpsIP31758_2082 conserved hypothetical protein K06889 K06889; uncharacterized protein
D YpsIP31758_2832 putative membrane protein K06890 K06890; uncharacterized protein
D YpsIP31758_2184 baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D YpsIP31758_2193 late control gene D protein K06905 D; Bacteriophage probable baseplate hub protein
D YpsIP31758_2192 phage P2 GpU K06906 gpU; phage tail protein
D YpsIP31758_2187 tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D YpsIP31758_2188 tail tube protein K06908 FII; Bacteriophage tail tube protein
D YpsIP31758_1790 conserved hypothetical protein K06918 K06918; uncharacterized protein
D YpsIP31758_2533 CoA binding domain protein K06929 K06929; uncharacterized protein
D YpsIP31758_1765 conserved hypothetical protein K06938 K06938; uncharacterized protein
D YpsIP31758_2696 conserved hypothetical protein K06940 K06940; uncharacterized protein
D YpsIP31758_0759 putative GTPase K06946 K06946; uncharacterized protein
D YpsIP31758_1685 sodium:dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D YpsIP31758_0577 yqiA; esterase YqiA K07000 K07000; uncharacterized protein
D YpsIP31758_1593 conserved hypothetical protein K07000 K07000; uncharacterized protein
D YpsIP31758_2723 sulfatase family protein K07014 K07014; uncharacterized protein
D YpsIP31758_3940 hydrolase, alpha/beta fold family K07019 K07019; uncharacterized protein
D YpsIP31758_3467 gpr1/fun34/yaaH family protein K07034 K07034; uncharacterized protein
D YpsIP31758_1250 metalloprotease-like protein K07054 K07054; uncharacterized protein
D YpsIP31758_3929 conserved hypothetical protein K07070 K07070; uncharacterized protein
D YpsIP31758_1432 NAD dependent epimerase/dehydratase family protein K07071 K07071; uncharacterized protein
D YpsIP31758_1407 putative membrane protein K07090 K07090; uncharacterized protein
D YpsIP31758_1434 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D YpsIP31758_3629 conserved hypothetical protein K07109 K07109; uncharacterized protein
D YpsIP31758_3810 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D YpsIP31758_0475 putative LppC lipoprotein K07121 K07121; uncharacterized protein
D YpsIP31758_2097 conserved hypothetical protein K07126 K07126; uncharacterized protein
D YpsIP31758_2037 conserved hypothetical protein K07136 K07136; uncharacterized protein
D YpsIP31758_0468 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D YpsIP31758_2553 MOSC/iron-sulfur cluster binding domain protein K07140 K07140; MOSC domain-containing protein
D YpsIP31758_2469 putative membrane protein K07148 K07148; uncharacterized protein
D YpsIP31758_0827 conserved hypothetical protein TIGR00251 K09131 K09131; uncharacterized protein
D YpsIP31758_2953 conserved hypothetical protein K09158 K09158; uncharacterized protein
D YpsIP31758_2006 conserved hypothetical protein K09160 K09160; uncharacterized protein
D YpsIP31758_1445 YfbU domain protein K09161 K09161; uncharacterized protein
D YpsIP31758_1279 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D YpsIP31758_1947 YciI domain protein K09780 K09780; uncharacterized protein
D YpsIP31758_1992 conserved hypothetical protein K09786 K09786; uncharacterized protein
D YpsIP31758_2572 conserved hypothetical protein K09791 K09791; uncharacterized protein
D YpsIP31758_0073 Divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D YpsIP31758_2891 conserved hypothetical protein K09801 K09801; uncharacterized protein
D YpsIP31758_2417 conserved hypothetical protein K09802 K09802; uncharacterized protein
D YpsIP31758_0853 conserved hypothetical protein K09807 K09807; uncharacterized protein
D YpsIP31758_2613 conserved hypothetical protein K09824 virK; uncharacterized protein
D YpsIP31758_3159 conserved hypothetical protein K05952 K05952; uncharacterized protein
D YpsIP31758_2548 putative lipoprotein K09857 K09857; uncharacterized protein
D YpsIP31758_3473 conserved hypothetical protein K09861 K09861; uncharacterized protein
D YpsIP31758_3376 yacG; zinc-binding protein YacG K09862 K09862; uncharacterized protein
D YpsIP31758_3847 conserved hypothetical protein K09891 K09891; uncharacterized protein
D YpsIP31758_0023 conserved hypothetical protein K09894 K09894; uncharacterized protein
D YpsIP31758_0859 YecA family protein K09895 K09895; uncharacterized protein
D YpsIP31758_0018 conserved hypothetical protein K09896 K09896; uncharacterized protein
D YpsIP31758_0152 conserved hypothetical protein K09897 K09897; uncharacterized protein
D YpsIP31758_3941 conserved hypothetical protein K09898 K09898; uncharacterized protein
D YpsIP31758_1444 conserved hypothetical protein K09899 K09899; uncharacterized protein
D YpsIP31758_1954 conserved hypothetical protein K09901 K09901; uncharacterized protein
D YpsIP31758_2009 conserved hypothetical protein K09902 K09902; uncharacterized protein
D YpsIP31758_2722 conserved hypothetical protein K09904 K09904; uncharacterized protein
D YpsIP31758_2041 conserved hypothetical protein K09907 K09907; uncharacterized protein
D YpsIP31758_0457 conserved hypothetical protein K09908 K09908; uncharacterized protein
D YpsIP31758_2534 conserved hypothetical protein K09909 K09909; uncharacterized protein
D YpsIP31758_3358 conserved hypothetical protein K09910 K09910; uncharacterized protein
D YpsIP31758_2544 conserved hypothetical protein K09911 K09911; uncharacterized protein
D YpsIP31758_2403 conserved hypothetical protein K09912 K09912; uncharacterized protein
D YpsIP31758_2048 conserved hypothetical protein K09915 K09915; uncharacterized protein
D YpsIP31758_1985 conserved hypothetical protein K09916 K09916; uncharacterized protein
D YpsIP31758_2352 conserved hypothetical protein K09917 K09917; uncharacterized protein
D YpsIP31758_2349 conserved hypothetical protein K09918 K09918; uncharacterized protein
D YpsIP31758_0575 conserved hypothetical protein K09920 K09920; uncharacterized protein
D YpsIP31758_0206 conserved hypothetical protein K09921 K09921; uncharacterized protein
D YpsIP31758_0821 conserved hypothetical protein K09923 K09923; uncharacterized protein
D YpsIP31758_3649 putative membrane protein K09937 K09937; uncharacterized protein
D YpsIP31758_1209 conserved hypothetical protein K09946 K09946; uncharacterized protein
D YpsIP31758_1322 conserved hypothetical protein K09954 K09954; uncharacterized protein
D YpsIP31758_2759 conserved hypothetical protein K09958 K09958; uncharacterized protein
D YpsIP31758_2222 conserved hypothetical protein K09960 K09960; uncharacterized protein
D YpsIP31758_2940 conserved domain protein K09960 K09960; uncharacterized protein
D YpsIP31758_2224 phage-associated protein, HI1409 family K09961 K09961; uncharacterized protein
D YpsIP31758_1324 conserved hypothetical protein K09962 K09962; uncharacterized protein
D YpsIP31758_3028 GumN family protein K09973 K09973; uncharacterized protein
D YpsIP31758_2110 putative cold inducible protein Ves K09975 K09975; uncharacterized protein
D YpsIP31758_1811 conserved hypothetical protein K09978 K09978; uncharacterized protein
D YpsIP31758_3570 conserved hypothetical protein K09979 K09979; uncharacterized protein
D YpsIP31758_1948 conserved hypothetical protein K09981 K09981; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 28, 2024