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09100 Metabolism
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:abc03000]
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03021 Transcription machinery [BR:abc03021]
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03019 Messenger RNA biogenesis [BR:abc03019]
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03041 Spliceosome
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03011 Ribosome [BR:abc03011]
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03009 Ribosome biogenesis [BR:abc03009]
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ACICU_02796 dsRNA-specific ribonuclease
ACICU_00541 Oligoribonuclease (3'->5' exoribonuclease)
ACICU_02795 GTPase
ACICU_02776 predicted GTPase
ACICU_00271 DnaK suppressor protein
ACICU_00349 Transcription elongation factor
ACICU_03590 Transcription termination factor
ACICU_00298 Transcription antiterminator
ACICU_02317 16S rRNA uridine-516 pseudouridylate synthase
ACICU_03197 Dimethyladenosine transferase (rRNA methylation)
ACICU_03656 tRNA and rRNA cytosine-C5-methylase
ACICU_03085 16S RNA G1207 methylase RsmC
ACICU_00980 N6-adenine-specific methylase
ACICU_02538 uncharacterized protein conserved in bacteria
ACICU_01597 predicted S-adenosylmethionine-dependent methyltransferase
ACICU_03403 predicted S-adenosylmethionine-dependent methyltransferase
ACICU_01088 predicted methyltransferase
ACICU_00645 SAM-dependent methyltransferase
ACICU_03396 SAM-dependent methyltransferase
ACICU_00340 rRNA methylase
ACICU_02925 23S rRNA methylase
ACICU_00991 uncharacterized conserved protein
ACICU_03218 Protein involved in catabolism of external DNA
ACICU_01168 predicted SAM-dependent methyltransferase
ACICU_00508 predicted Fe-S-cluster redox enzyme
ACICU_00582 SAM-dependent methyltransferase
ACICU_02670 Pseudouridylate synthase, 23S RNA-specific
ACICU_00117 pseudouridylate synthase, 23S RNA-specific
ACICU_02314 Pseudouridylate synthase, 23S RNA-specific
ACICU_00768 16S rRNA uridine-516 pseudouridylate synthase
ACICU_00411 Pseudouridylate synthase, 23S RNA-specific
ACICU_00794 Pseudouridylate synthase, 23S RNA-specific
ACICU_02688 16S rRNA uridine-516 pseudouridylate synthase
ACICU_00821 Acetyltransferase
ACICU_03362 RimM protein, required for 16S rRNA processing
ACICU_02099 2-methylthioadenine synthetase
ACICU_02386 ribosomal protein L11 methyltransferase
ACICU_01729 Methylase of polypeptide chain release factors
ACICU_01587 uncharacterized conserved protein
ACICU_00410 Ribonuclease G and E
ACICU_03028 Ribonuclease G and E
ACICU_00335 predicted endonuclease
ACICU_00540 predicted GTPase
ACICU_00516 predicted GTPase
ACICU_03192 GTPase
ACICU_00187 putative translation factor (SUA5)
ACICU_03374 Guanosine polyphosphate pyrophosphohydrolases/synthetase
ACICU_00351 Ribosome-binding factor A
ACICU_00348 uncharacterized protein conserved in bacteria
ACICU_00575 uncharacterized plant Iojap protein
ACICU_03227 predicted metal-dependent hydrolase
ACICU_02926 predicted RNA-binding protein containing KH domain, possibly ribosomal protein
ACICU_00593 uncharacterized protein conserved in bacteria
ACICU_00628 Ribosome-associated protein Y (PSrp-1)
ACICU_01521 predicted GTPase, probable translation factor
ACICU_00773 predicted metal-binding, possibly nucleic acid-binding protein
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K03685 rnc; ribonuclease III [EC:3.1.26.3]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; RNA polymerase-binding transcription factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K02860 rimM; 16S rRNA processing protein RimM
K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K09889 yjgA; ribosome-associated protein
K05808 hpf; ribosome hibernation promoting factor
K06942 ychF; ribosome-binding ATPase
K07040 yceD; DUF177 domain-containing protein
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03016 Transfer RNA biogenesis [BR:abc03016]
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03012 Translation factors [BR:abc03012]
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03110 Chaperones and folding catalysts [BR:abc03110]
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04131 Membrane trafficking [BR:abc04131]
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04121 Ubiquitin system [BR:abc04121]
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03051 Proteasome [BR:abc03051]
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03032 DNA replication proteins [BR:abc03032]
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03036 Chromosome and associated proteins [BR:abc03036]
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03400 DNA repair and recombination proteins [BR:abc03400]
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03029 Mitochondrial biogenesis [BR:abc03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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