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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:cpm03030]
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03410 Base excision repair [PATH:cpm03410]
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03420 Nucleotide excision repair [PATH:cpm03420]
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03430 Mismatch repair [PATH:cpm03430]
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03440 Homologous recombination [PATH:cpm03440]
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 G5S_0500 recJ; single-stranded-DNA-specific exonuclease RecJ
G5S_0752 Single-strand binding protein
G5S_0793 DNA replication and repair protein recF
G5S_0465 recO; DNA repair protein RecO
G5S_0838 recR; recombination protein RecR
G5S_0283 recA; recA protein
G5S_0428 ruvA; Holliday junction DNA helicase RuvA
G5S_0748 ruvB; Holliday junction DNA helicase RuvB
G5S_0427 ruvC; crossover junction endodeoxyribonuclease RuvC
G5S_0305 recB; exodeoxyribonuclease V, beta subunit
G5S_0307 exodeoxyribonuclease v, gamma
G5S_1023 helicase, RecD/TraA family
G5S_0288 recD; exodeoxyribonuclease V, alpha subunit
G5S_0379 dnaE; DNA polymerase III alpha subunit
G5S_0795 dnaN; DNA polymerase III, beta subunit
G5S_0866 DNA-directed DNA polymerase III chain
G5S_0677 dnaH; DNA polymerase III, gamma subunit
G5S_0756 conserved hypothetical protein
G5S_0724 DNA polymerase III epsilon chain
G5S_0390 DNA polymerase III epsilon chain
G5S_0107 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:cpm03000]
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03021 Transcription machinery [BR:cpm03021]
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03019 Messenger RNA biogenesis [BR:cpm03019]
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03041 Spliceosome
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03011 Ribosome [BR:cpm03011]
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03009 Ribosome biogenesis [BR:cpm03009]
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03016 Transfer RNA biogenesis [BR:cpm03016]
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03012 Translation factors [BR:cpm03012]
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03110 Chaperones and folding catalysts [BR:cpm03110]
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04131 Membrane trafficking [BR:cpm04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:cpm03032]
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03036 Chromosome and associated proteins [BR:cpm03036]
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03400 DNA repair and recombination proteins [BR:cpm03400]
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G5S_0456 DNA methyltransferase
G5S_0269 ung; uracil-DNA glycosylase
G5S_0567 methylpurine-DNA glycosylase family protein
G5S_0736 adenine glycosylase
G5S_0205 putative endonuclease III
G5S_0685 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase
G5S_0311 DNA-(Apurinic or apyrimidinic site) lyase
G5S_0500 recJ; single-stranded-DNA-specific exonuclease RecJ
G5S_0993 ligA; DNA ligase, NAD-dependent
G5S_1051 uvrA; UvrABC system protein A
G5S_0241 uvrB; excinuclease ABC, B subunit
G5S_0097 uvrC; excinuclease ABC, C subunit
G5S_0271 ATP-dependent helicase PcrA
G5S_1066 rpoB; DNA-directed RNA polymerase, beta subunit
G5S_1065 rpoC; DNA-directed RNA polymerase, beta' subunit
G5S_0419 rpoA; DNA-directed RNA polymerase, alpha subunit
G5S_0142 mfd; transcription-repair coupling factor
G5S_0095 mutS; DNA mismatch repair protein MutS
G5S_0228 DNA mismatch repair protein mutL
G5S_0650 xseA; exonuclease VII large subunit
G5S_0649 xseB; exodeoxyribonuclease VII, small subunit
G5S_0379 dnaE; DNA polymerase III alpha subunit
G5S_0795 dnaN; DNA polymerase III, beta subunit
G5S_0756 conserved hypothetical protein
G5S_0724 DNA polymerase III epsilon chain
G5S_0390 DNA polymerase III epsilon chain
G5S_0866 DNA-directed DNA polymerase III chain
G5S_0677 dnaH; DNA polymerase III, gamma subunit
G5S_0752 Single-strand binding protein
G5S_0305 recB; exodeoxyribonuclease V, beta subunit
G5S_0307 exodeoxyribonuclease v, gamma
G5S_1023 helicase, RecD/TraA family
G5S_0288 recD; exodeoxyribonuclease V, alpha subunit
G5S_0283 recA; recA protein
G5S_0428 ruvA; Holliday junction DNA helicase RuvA
G5S_0748 ruvB; Holliday junction DNA helicase RuvB
G5S_0427 ruvC; crossover junction endodeoxyribonuclease RuvC
G5S_0107 primosomal protein N'
G5S_0679 radA; DNA repair protein RadA
G5S_0793 DNA replication and repair protein recF
G5S_0465 recO; DNA repair protein RecO
G5S_0838 recR; recombination protein RecR
G5S_0864 gyrA; DNA gyrase, A subunit
G5S_0327 DNA gyrase/topoisomerase IV, A subunit
G5S_0863 gyrB; DNA gyrase, B subunit
G5S_0328 DNA gyrase B
G5S_0275 DNA topoisomerase
G5S_0718 himA; Bacterial histone-like DNA-binding protein
G5S_0053 nrdA; ribonucleoside-diphosphate reductase, alpha subunit
G5S_0052 ribonucleoside-diphosphate reductase, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05788 ihfB; integration host factor subunit beta
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:cpm03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Chlamydia pecorum E58