Ribosome Biogenesis - Oryza sativa japonica (Japanese rice) (RAPDB)

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     KO
 Eukaryotic type
   Sno RNPs
   90S particles
   Pre-40S particles
   Pre-60S particles
     Helicases
     GTPases
     RNases
     Kinases
     Export and cytoplasmic maturation factors
     5-FMC complex
     Other pre-60S particles
       Os02t0591800-01 Os02g0591800; Brix domain containing protein.
       Os08t0564500-01 Os08g0564500; Zinc finger, U1-type domain containing protein.
       Os07t0475800-01 Os07g0475800; Eukaryotic rRNA processing family protein.
       Os07t0435400-01 Os07g0435400; Similar to WD40.
       Os04t0446500-01 Os04g0446500; Similar to OSIGBa0140O07.15 protein.
       Os09t0293900-01 Os09g0293900; Similar to FK506-binding protein 39 kDa.
       Os12t0615900-01 Os12g0615900; WD40/YVTN repeat-like domain containing protein.
       Os07t0270900-01 Os07g0270900; Mak16 protein family protein.
       Os07t0271600-00 Os07g0271600; Similar to MAK16 protein-related.
       Os09t0116400-01 Os09g0116400; CCAAT-binding factor domain containing protein.
       Os10t0456900-01 Os10g0456900; Similar to Midasin.
       Os07t0670600-01 Os07g0670600; Ribosome biogenesis factor, NIP7 domain containing protein.
       Os12t0163200-01 Os12g0163200; Uncharacterised protein family UPF0120 domain containing protein.
       Os10t0495500-01 Os10g0495500; Hypothetical conserved gene.
       Os06t0498500-01 Os06g0498500; CCAAT-binding factor domain containing protein.
       Os02t0724600-01 Os02g0724600; Similar to predicted protein.
       Os09t0551300-01 Os09g0551300; Similar to predicted protein.
       Os03t0824300-00 Os03g0824300; Hypothetical conserved gene.
       Os03t0801800-01 Os03g0801800; Nucleotide-binding, alpha-beta plait domain containing protein.
       Os03t0854300-01 Os03g0854300; Nucleotide-binding, alpha-beta plait domain containing protein.
       Os08t0412200-01 Os08g0412200; Nucleotide-binding, alpha-beta plait domain containing protein.
       Os05t0367100-01 Os05g0367100; Ribosome biogenesis protein Nop16 domain containing protein.
       Os05t0144200-01 Os05g0144200; Similar to glioma tumor suppressor-like protein.
       Os07t0506700-01 Os07g0506700; WD40 repeat-like domain containing protein.
       Os07t0673100-01 Os07g0673100; Ribosomal protein S8e domain containing protein.
       Os03t0699200-01 Os03g0699200; BRCT domain containing protein.
       Os03t0831100-01 Os03g0831100; Armadillo-like helical domain containing protein.
       Os01t0924300-01 Os01g0924300; WD40 repeat-like domain containing protein.
       Os05t0392100-01 Os05g0392100; Similar to glycine-rich protein.
       Os06t0109400-01 Os06g0109400; ATPase, AAA-type, core domain containing protein.
       Os06t0137500-01 Os06g0137500; Similar to predicted protein.
       Os01t0513800-01 Os01g0513800; Similar to Brix domain containing protein 1 homolog.
       Os05t0506900-01 Os05g0506900; Similar to Brix domain-containing protein 1.
       Os11t0134500-01 Os11g0134500; WD40 repeat-like domain containing protein.
       Os12t0132400-01 Os12g0132400; Similar to Grwd-pending-prov protein.
       Os04t0658600-01 Os04g0658600; Similar to OSIGBa0132E09-OSIGBa0108L24.7 protein.
       Os02t0593900-01 Os02g0593900; Methyltransferase-related domain containing protein.
       Os02t0782100-01 Os02g0782100; Uncharacterised domain NUC173 domain containing protein.
       Os01t0957900-01 Os01g0957900; Armadillo-type fold domain containing protein.
       Os03t0353500-01 Os03g0353500; Nucleolar protein 12 domain containing protein.
       Os06t0142050-00 Os06g0142050; Similar to H0913C04.9 protein.
       Os04t0685100-01 Os04g0685100; Ribosomal biogenesis regulatory protein family protein.
       Os10t0104500-01 Os10g0104500; Similar to Notchless-related.
       Os11t0594200-01 Os11g0594200; Similar to Notchless gene homolog.
       Os04t0630000-01 Os04g0630000; SDA1 domain containing protein.
       Os09t0445100-00 Os09g0445100; Ribosomal RNA methyltransferase RrmJ/FtsJ domain containing protein.
       Os05t0567400-01 Os05g0567400; Ribosomal RNA methyltransferase J domain containing protein.
       Os03t0343700-01 Os03g0343700; Brix domain containing protein.
       Os07t0600400-01 Os07g0600400; WD40/YVTN repeat-like domain containing protein.
K14820 BRX1; ribosome biogenesis protein BRX1 
K14821 BUD20; bud site selection protein 20 
K14823 EBP2; rRNA-processing protein EBP2 
K14824 ERB1; ribosome biogenesis protein ERB1 
K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] 
K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] 
K14830 MAK11; protein MAK11 
K14831 MAK16; protein MAK16 
K14831 MAK16; protein MAK16 
K14832 MAK21; ribosome biogenesis protein MAK21 
K14572 MDN1; midasin 
K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 
K14833 NOC2; nucleolar complex protein 2 
K14833 NOC2; nucleolar complex protein 2 
K14834 NOC3; nucleolar complex protein 3 
K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] 
K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] 
K14573 NOP4; nucleolar protein 4 
K14573 NOP4; nucleolar protein 4 
K14837 NOP12; nucleolar protein 12 
K14838 NOP15; nucleolar protein 15 
K14839 NOP16; nucleolar protein 16 
K14840 NOP53; nucleolar protein 53 
K14841 NSA1; ribosome biogenesis protein NSA1 
K14842 NSA2; ribosome biogenesis protein NSA2 
K14843 PES1; pescadillo 
K14844 PUF6; pumilio homology domain family member 6 
K14791 PWP1; periodic tryptophan protein 1 
K14845 RAI1; RAT1-interacting protein 
K14571 RIX7; ribosome biogenesis ATPase 
K14846 RPF1; ribosome production factor 1 
K14847 RPF2; ribosome production factor 2 
K14847 RPF2; ribosome production factor 2 
K14848 RRB1; ribosome assembly protein RRB1 
K14848 RRB1; ribosome assembly protein RRB1 
K14849 RRP1; ribosomal RNA-processing protein 1 
K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] 
K14794 RRP12; ribosomal RNA-processing protein 12 
K14794 RRP12; ribosomal RNA-processing protein 12 
K14851 RRP17; ribosomal RNA-processing protein 17 
K14852 RRS1; regulator of ribosome biosynthesis 
K14852 RRS1; regulator of ribosome biosynthesis 
K14855 RSA4; ribosome assembly protein 4 
K14855 RSA4; ribosome assembly protein 4 
K14856 SDA1; protein SDA1 
K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] 
K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] 
K14859 SSF1_2; ribosome biogenesis protein SSF1/2 
K14863 WDR12; ribosome biogenesis protein 
   Other ribosome biogenesis factors
 
 Prokaryotic type
 
 Related small nucleolar RNAs

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Last updated: April 8, 2019