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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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03060 Protein export [PATH:ecj03060]
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04141 Protein processing in endoplasmic reticulum
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04130 SNARE interactions in vesicular transport
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04120 Ubiquitin mediated proteolysis
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04122 Sulfur relay system [PATH:ecj04122]
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03050 Proteasome
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03018 RNA degradation [PATH:ecj03018]
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JW2798 nudH; nucleotide hydrolase
JW1071 rne; fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome
JW3753 rhlB; ATP-dependent RNA helicase
JW2750 eno; enolase
JW5851 pnp; polynucleotide phosphorylase/polyadenylase
JW0781 rhlE; RNA helicase
JW5741 rnr; exoribonuclease R, RNase R
JW5531 deaD; ATP-dependent RNA helicase
JW5855 recQ; ATP-dependent DNA helicase
JW3756 rho; transcription termination factor
JW3887 pfkA; 6-phosphofructokinase I
JW0013 dnaK; chaperone Hsp70, co-chaperone with DnaJ
JW4103 groL; Cpn60 chaperonin GroEL, large subunit of GroESL
JW4130 hfq; HF-I, host factor for RNA phage Q beta replication
JW2486 ppk; polyphosphate kinase, component of RNA degradosome
JW5808 pcnB; poly(A) polymerase I
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K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03628 rho; transcription termination factor Rho
K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
K04043 dnaK; molecular chaperone DnaK
K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
K03666 hfq; host factor-I protein
K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
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09124 Replication and repair
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ecj03000]
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03021 Transcription machinery [BR:ecj03021]
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03019 Messenger RNA biogenesis [BR:ecj03019]
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JW1071 rne; fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome
JW3216 rng; ribonuclease G
JW2551 rnc; RNase III
JW5741 rnr; exoribonuclease R, RNase R
JW5740 orn; oligoribonuclease
JW3753 rhlB; ATP-dependent RNA helicase
JW0781 rhlE; RNA helicase
JW5531 deaD; ATP-dependent RNA helicase
JW5855 recQ; ATP-dependent DNA helicase
JW2750 eno; enolase
JW5851 pnp; polynucleotide phosphorylase/polyadenylase
JW3756 rho; transcription termination factor
JW3887 pfkA; 6-phosphofructokinase I
JW0013 dnaK; chaperone Hsp70, co-chaperone with DnaJ
JW4103 groL; Cpn60 chaperonin GroEL, large subunit of GroESL
JW4130 hfq; HF-I, host factor for RNA phage Q beta replication
JW2486 ppk; polyphosphate kinase, component of RNA degradosome
JW5808 pcnB; poly(A) polymerase I
JW2798 nudH; nucleotide hydrolase
JW2666 csrA; pleiotropic regulatory protein for carbon source metabolism
JW3221 yhdA; conserved inner membrane protein
JW3900 rraA; ribonuclease E (RNase E) inhibitor protein
JW4212 yjgD; conserved hypothetical protein
JW3172 yhbJ; hypothetical protein with nucleoside triphosphate hydrolase domain
JWR0036 dsrA; regulatory antisense RNA
JWR0254 ryhA; small RNA
JWR0245 sroF; small RNA
JWR0257 ryiA; regulatory sRNA
JWR0259 sgrS; small antisense RNA
JWR0219 ryhB; regulatory sRNA
JWR0227 rybB; small RNA
JWR0246 sraD; small RNA
JWR0043 micF; regulatory sRNA
JWR0062 csrB; regulatory sRNA
JWR0214 csrC; regulatory sRNA
JWR0203 rprA; regulatory sRNA
JWR0243 ryeE; small RNA
JWR0247 gcvB; regulatory sRNA
JWR0248 rygA; small RNA
JWR0249 rygB; small RNA
JWR0097 spf; Spot 42 RNA
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K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
K03628 rho; transcription termination factor Rho
K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
K04043 dnaK; molecular chaperone DnaK
K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
K03666 hfq; host factor-I protein
K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
K03563 csrA; carbon storage regulator
K18765 csrD; RNase E specificity factor CsrD
K02553 rraA; regulator of ribonuclease activity A
K09893 rraB; regulator of ribonuclease activity B
K06958 rapZ; RNase adapter protein RapZ
K18502 dsrA; small regulatory RNA DsrA
K18504 arcZ; small regulatory RNA ArcZ
K15841 glmY; small regulatory RNA GlmY
K18505 glmZ; small regulatory RNA GlmZ
K18506 sgrS; small regulatory RNA SgrS
K18507 ryhB; small regulatory RNA RyhB
K18508 rybB; small regulatory RNA RybB
K18511 micA; small regulatory RNA MicA
K18513 micF; small regulatory RNA MicF
K18515 csrB; small regulatory RNA CsrB
K18516 csrC; small regulatory RNA CsrC
K18518 rprA; small regulatory RNA RprA
K18520 cyaR; small regulatory RNA CyaR
K18521 gcvB; small regulatory RNA GcvB
K18522 omrA; small regulatory RNA OmrA
K18523 omrB; small regulatory RNA OmrB
K18527 spf; small regulatory RNA Spot 42
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03041 Spliceosome
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03011 Ribosome [BR:ecj03011]
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03009 Ribosome biogenesis [BR:ecj03009]
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03016 Transfer RNA biogenesis [BR:ecj03016]
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03012 Translation factors [BR:ecj03012]
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03110 Chaperones and folding catalysts [BR:ecj03110]
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04131 Membrane trafficking [BR:ecj04131]
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04121 Ubiquitin system [BR:ecj04121]
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03051 Proteasome [BR:ecj03051]
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03032 DNA replication proteins [BR:ecj03032]
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03036 Chromosome and associated proteins [BR:ecj03036]
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03400 DNA repair and recombination proteins [BR:ecj03400]
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03029 Mitochondrial biogenesis [BR:ecj03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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