KEGG Orthology (KO) - Escherichia coli K-12 W3110

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
     03060 Protein export [PATH:ecj03060]
     04141 Protein processing in endoplasmic reticulum
     04130 SNARE interactions in vesicular transport
     04120 Ubiquitin mediated proteolysis
     04122 Sulfur relay system [PATH:ecj04122]
     03050 Proteasome
     03018 RNA degradation [PATH:ecj03018]
       JW2798 nudH; nucleotide hydrolase
       JW1071 rne; fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome
       JW3753 rhlB; ATP-dependent RNA helicase
       JW2750 eno; enolase
       JW5851 pnp; polynucleotide phosphorylase/polyadenylase
       JW0781 rhlE; RNA helicase
       JW5741 rnr; exoribonuclease R, RNase R
       JW5531 deaD; ATP-dependent RNA helicase
       JW5855 recQ; ATP-dependent DNA helicase
       JW3756 rho; transcription termination factor
       JW3887 pfkA; 6-phosphofructokinase I
       JW0013 dnaK; chaperone Hsp70, co-chaperone with DnaJ
       JW4103 groL; Cpn60 chaperonin GroEL, large subunit of GroESL
       JW4130 hfq; HF-I, host factor for RNA phage Q beta replication
       JW2486 ppk; polyphosphate kinase, component of RNA degradosome
       JW5808 pcnB; poly(A) polymerase I
K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03628 rho; transcription termination factor Rho
K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
K04043 dnaK; molecular chaperone DnaK
K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
K03666 hfq; host factor-I protein
K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
 
   09124 Replication and repair
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ecj03000]
     03021 Transcription machinery [BR:ecj03021]
     03019 Messenger RNA biogenesis [BR:ecj03019]
       JW1071 rne; fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome
       JW3216 rng; ribonuclease G
       JW2551 rnc; RNase III
       JW5741 rnr; exoribonuclease R, RNase R
       JW5740 orn; oligoribonuclease
       JW3753 rhlB; ATP-dependent RNA helicase
       JW0781 rhlE; RNA helicase
       JW5531 deaD; ATP-dependent RNA helicase
       JW5855 recQ; ATP-dependent DNA helicase
       JW2750 eno; enolase
       JW5851 pnp; polynucleotide phosphorylase/polyadenylase
       JW3756 rho; transcription termination factor
       JW3887 pfkA; 6-phosphofructokinase I
       JW0013 dnaK; chaperone Hsp70, co-chaperone with DnaJ
       JW4103 groL; Cpn60 chaperonin GroEL, large subunit of GroESL
       JW4130 hfq; HF-I, host factor for RNA phage Q beta replication
       JW2486 ppk; polyphosphate kinase, component of RNA degradosome
       JW5808 pcnB; poly(A) polymerase I
       JW2798 nudH; nucleotide hydrolase
       JW2666 csrA; pleiotropic regulatory protein for carbon source metabolism
       JW3221 yhdA; conserved inner membrane protein
       JW3900 rraA; ribonuclease E (RNase E) inhibitor protein
       JW4212 yjgD; conserved hypothetical protein
       JW3172 yhbJ; hypothetical protein with nucleoside triphosphate hydrolase domain
       JWR0036 dsrA; regulatory antisense RNA
       JWR0254 ryhA; small RNA
       JWR0245 sroF; small RNA
       JWR0257 ryiA; regulatory sRNA
       JWR0259 sgrS; small antisense RNA
       JWR0219 ryhB; regulatory sRNA
       JWR0227 rybB; small RNA
       JWR0246 sraD; small RNA
       JWR0043 micF; regulatory sRNA
       JWR0062 csrB; regulatory sRNA
       JWR0214 csrC; regulatory sRNA
       JWR0203 rprA; regulatory sRNA
       JWR0243 ryeE; small RNA
       JWR0247 gcvB; regulatory sRNA
       JWR0248 rygA; small RNA
       JWR0249 rygB; small RNA
       JWR0097 spf; Spot 42 RNA
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
K03628 rho; transcription termination factor Rho
K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
K04043 dnaK; molecular chaperone DnaK
K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
K03666 hfq; host factor-I protein
K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
K03563 csrA; carbon storage regulator
K18765 csrD; RNase E specificity factor CsrD
K02553 rraA; regulator of ribonuclease activity A
K09893 rraB; regulator of ribonuclease activity B
K06958 rapZ; RNase adapter protein RapZ
K18502 dsrA; small regulatory RNA DsrA
K18504 arcZ; small regulatory RNA ArcZ
K15841 glmY; small regulatory RNA GlmY
K18505 glmZ; small regulatory RNA GlmZ
K18506 sgrS; small regulatory RNA SgrS
K18507 ryhB; small regulatory RNA RyhB
K18508 rybB; small regulatory RNA RybB
K18511 micA; small regulatory RNA MicA
K18513 micF; small regulatory RNA MicF
K18515 csrB; small regulatory RNA CsrB
K18516 csrC; small regulatory RNA CsrC
K18518 rprA; small regulatory RNA RprA
K18520 cyaR; small regulatory RNA CyaR
K18521 gcvB; small regulatory RNA GcvB
K18522 omrA; small regulatory RNA OmrA
K18523 omrB; small regulatory RNA OmrB
K18527 spf; small regulatory RNA Spot 42
     03041 Spliceosome
     03011 Ribosome [BR:ecj03011]
     03009 Ribosome biogenesis [BR:ecj03009]
     03016 Transfer RNA biogenesis [BR:ecj03016]
     03012 Translation factors [BR:ecj03012]
     03110 Chaperones and folding catalysts [BR:ecj03110]
     04131 Membrane trafficking [BR:ecj04131]
     04121 Ubiquitin system [BR:ecj04121]
     03051 Proteasome [BR:ecj03051]
     03032 DNA replication proteins [BR:ecj03032]
     03036 Chromosome and associated proteins [BR:ecj03036]
     03400 DNA repair and recombination proteins [BR:ecj03400]
     03029 Mitochondrial biogenesis [BR:ecj03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 23, 2024