DNA Repair and Recombination Proteins - Geospiza fortis (medium ground-finch)

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     KO 
 Eukaryotic type

   SSBR (single strand breaks repair)

     Direct repair

     BER (base exicision repair)

       DNA glycosylases

       AP endonucleases

       Long Patch-BER factors

       Short Patch-BER factors

       Other BER factors

         102040820 TDP1; tyrosyl-DNA phosphodiesterase 1
         102042023 APTX; aprataxin
         102031676 APLF; aprataxin and PNKP like factor
         102043316 HMGB1; high mobility group box 1
         102040081 POLL; DNA polymerase lambda
         102041130 PARP1; poly(ADP-ribose) polymerase 1
         102033778 PARP3; poly(ADP-ribose) polymerase family member 3

K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] 
K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] 
K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-] 
K10802 HMGB1; high mobility group protein B1 
K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] 
K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30] 
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] 

     NER (nucleotide excision repair)

     MMR (mismatch excision repair)

   DSBR (double strand breaks repair)

   TLS (translesion DNA synthesis) factors

   Check point factors

   Other factors with a suspected DNA repair function

 





 Prokaryotic type













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Last updated: March 29, 2024