09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:las03030]
CLIBASIA_03545 dnaQ; DNA polymerase III subunit epsilon CLIBASIA_00510 holB; DNA polymerase III subunit delta' CLIBASIA_03475 holA; DNA polymerase III subunit delta CLIBASIA_01380 DNA polymerase III subunit chi CLIBASIA_01695 dnaA; DNA polymerase III subunit beta CLIBASIA_01085 dnaB; replicative DNA helicase CLIBASIA_05280 replicative DNA helicase CLIBASIA_03645 dnaG; DNA primase CLIBASIA_00330 single-strand binding protein (ssb) CLIBASIA_03435 rnhA; ribonuclease H CLIBASIA_04890 rnhB; ribonuclease HII CLIBASIA_05395 ligA; NAD-dependent DNA ligase LigA
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] K02316 dnaG; DNA primase [EC:2.7.7.101] K03111 ssb; single-strand DNA-binding protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] K03470 rnhB; ribonuclease HII [EC:3.1.26.4] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03410 Base excision repair [PATH:las03410]
CLIBASIA_01340 endonuclease III CLIBASIA_04880 uracil-DNA glycosylase CLIBASIA_01820 mutY; A/G-specific adenine glycosylase CLIBASIA_02560 fpg; formamidopyrimidine-DNA glycosylase CLIBASIA_03150 putative uracil-DNA glycosylase CLIBASIA_00865 xthA; exodeoxyribonuclease III protein CLIBASIA_04000 recJ; single-stranded-DNA-specific exonuclease protein CLIBASIA_05395 ligA; NAD-dependent DNA ligase LigA
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03420 Nucleotide excision repair [PATH:las03420]
CLIBASIA_04230 mdf; transcription-repair coupling factor CLIBASIA_00335 uvrA; excinuclease ABC subunit A CLIBASIA_04460 uvrB; excinuclease ABC subunit B CLIBASIA_02430 uvrC; excinuclease ABC subunit C CLIBASIA_04255 DNA helicase II CLIBASIA_05395 ligA; NAD-dependent DNA ligase LigA
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03430 Mismatch repair [PATH:las03430]
CLIBASIA_03185 mutS; DNA mismatch repair protein CLIBASIA_01420 mutL; DNA mismatch repair protein CLIBASIA_04255 DNA helicase II CLIBASIA_02740 sbcB; exonuclease I CLIBASIA_03410 xseA; exodeoxyribonuclease VII large subunit CLIBASIA_01760 exodeoxyribonuclease VII small subunit CLIBASIA_04000 recJ; single-stranded-DNA-specific exonuclease protein CLIBASIA_00330 single-strand binding protein (ssb) CLIBASIA_01695 dnaA; DNA polymerase III subunit beta CLIBASIA_03475 holA; DNA polymerase III subunit delta CLIBASIA_00510 holB; DNA polymerase III subunit delta' CLIBASIA_03545 dnaQ; DNA polymerase III subunit epsilon CLIBASIA_01380 DNA polymerase III subunit chi CLIBASIA_05395 ligA; NAD-dependent DNA ligase LigA
K03555 mutS; DNA mismatch repair protein MutS K03572 mutL; DNA mismatch repair protein MutL K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K03111 ssb; single-strand DNA-binding protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03440 Homologous recombination [PATH:las03440]
03450 Non-homologous end-joining
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:las03000]
03021 Transcription machinery [BR:las03021]
03019 Messenger RNA biogenesis [BR:las03019]
03041 Spliceosome
03011 Ribosome [BR:las03011]
03009 Ribosome biogenesis [BR:las03009]
03016 Transfer RNA biogenesis [BR:las03016]
03012 Translation factors [BR:las03012]
03110 Chaperones and folding catalysts [BR:las03110]
04131 Membrane trafficking [BR:las04131]
04121 Ubiquitin system
03051 Proteasome
03032 DNA replication proteins [BR:las03032]
CLIBASIA_03435 rnhA; ribonuclease H CLIBASIA_01915 ihfA; integration host factor subunit alpha CLIBASIA_03175 integration host factor, beta subunit CLIBASIA_02570 dnaA; chromosomal replication initiation protein CLIBASIA_01085 dnaB; replicative DNA helicase CLIBASIA_05280 replicative DNA helicase CLIBASIA_03645 dnaG; DNA primase CLIBASIA_00330 single-strand binding protein (ssb) CLIBASIA_01695 dnaA; DNA polymerase III subunit beta CLIBASIA_01380 DNA polymerase III subunit chi CLIBASIA_03475 holA; DNA polymerase III subunit delta CLIBASIA_00510 holB; DNA polymerase III subunit delta' CLIBASIA_03545 dnaQ; DNA polymerase III subunit epsilon CLIBASIA_04890 rnhB; ribonuclease HII CLIBASIA_05395 ligA; NAD-dependent DNA ligase LigA CLIBASIA_00325 gyrA; DNA gyrase subunit A CLIBASIA_03525 gyrB; DNA gyrase subunit B CLIBASIA_01190 parC; DNA topoisomerase IV subunit A CLIBASIA_00535 DNA topoisomerase IV subunit B CLIBASIA_00955 DNA topoisomerase I
K03469 rnhA; ribonuclease HI [EC:3.1.26.4] K04764 ihfA; integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta K02313 dnaA; chromosomal replication initiator protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] K02316 dnaG; DNA primase [EC:2.7.7.101] K03111 ssb; single-strand DNA-binding protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K03470 rnhB; ribonuclease HII [EC:3.1.26.4] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
03036 Chromosome and associated proteins [BR:las03036]
03400 DNA repair and recombination proteins [BR:las03400]
CLIBASIA_05385 deoxyribodipyrimidine photolyase CLIBASIA_04880 uracil-DNA glycosylase CLIBASIA_01820 mutY; A/G-specific adenine glycosylase CLIBASIA_01340 endonuclease III CLIBASIA_01050 mutT; mutator MutT protein CLIBASIA_04635 deoxyuridine 5 27-triphosphate nucleotidohydrolase CLIBASIA_03150 putative uracil-DNA glycosylase CLIBASIA_02560 fpg; formamidopyrimidine-DNA glycosylase CLIBASIA_00865 xthA; exodeoxyribonuclease III protein CLIBASIA_04000 recJ; single-stranded-DNA-specific exonuclease protein CLIBASIA_05395 ligA; NAD-dependent DNA ligase LigA CLIBASIA_00335 uvrA; excinuclease ABC subunit A CLIBASIA_04460 uvrB; excinuclease ABC subunit B CLIBASIA_02430 uvrC; excinuclease ABC subunit C CLIBASIA_04255 DNA helicase II CLIBASIA_00110 rpoB; DNA-directed RNA polymerase subunit beta CLIBASIA_00105 rpoC; DNA-directed RNA polymerase subunit beta' CLIBASIA_00610 rpoA; DNA-directed RNA polymerase subunit alpha CLIBASIA_04180 ropZ; DNA-directed RNA polymerase subunit omega CLIBASIA_04230 mdf; transcription-repair coupling factor CLIBASIA_03185 mutS; DNA mismatch repair protein CLIBASIA_01420 mutL; DNA mismatch repair protein CLIBASIA_02740 sbcB; exonuclease I CLIBASIA_03410 xseA; exodeoxyribonuclease VII large subunit CLIBASIA_01760 exodeoxyribonuclease VII small subunit CLIBASIA_01695 dnaA; DNA polymerase III subunit beta CLIBASIA_01380 DNA polymerase III subunit chi CLIBASIA_03475 holA; DNA polymerase III subunit delta CLIBASIA_00510 holB; DNA polymerase III subunit delta' CLIBASIA_03545 dnaQ; DNA polymerase III subunit epsilon CLIBASIA_00330 single-strand binding protein (ssb) CLIBASIA_00385 recA; recombinase A CLIBASIA_02200 ruvA; Holliday junction DNA helicase RuvA CLIBASIA_02195 ruvB; Holliday junction DNA helicase RuvB CLIBASIA_02205 ruvC; Holliday junction resolvase CLIBASIA_02530 priA; primosome assembly protein PriA CLIBASIA_01095 DNA repair protein RadA CLIBASIA_03285 recF; recombination protein F CLIBASIA_04220 ATP-dependent DNA helicase RecG CLIBASIA_04235 recO; DNA repair protein RecO CLIBASIA_03255 recR; recombination protein RecR CLIBASIA_05400 recN; DNA repair protein RecN CLIBASIA_03580 double-strand break repair protein AddB CLIBASIA_00325 gyrA; DNA gyrase subunit A CLIBASIA_03525 gyrB; DNA gyrase subunit B CLIBASIA_00955 DNA topoisomerase I CLIBASIA_01915 ihfA; integration host factor subunit alpha CLIBASIA_03175 integration host factor, beta subunit CLIBASIA_01945 ribonucleotide-diphosphate reductase subunit alpha CLIBASIA_03700 ribonucleotide-diphosphate reductase subunit beta CLIBASIA_04325 ribonucleotide-diphosphate reductase subunit beta
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03555 mutS; DNA mismatch repair protein MutS K03572 mutL; DNA mismatch repair protein MutL K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K04764 ihfA; integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:las03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Candidatus Liberibacter asiaticus psy62 KEGG Orthology (KO) - Candidatus Liberibacter asiaticus psy62