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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:lay03030]
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03410 Base excision repair [PATH:lay03410]
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03420 Nucleotide excision repair [PATH:lay03420]
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03430 Mismatch repair [PATH:lay03430]
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03440 Homologous recombination [PATH:lay03440]
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 LAB52_06380 single-stranded-DNA-specific exonuclease
LAB52_00040 single-stranded DNA-binding protein
LAB52_00020 recF; recombination protein F
LAB52_06085 DNA repair protein recO
LAB52_01850 recR; recombination protein RecR
LAB52_03285 recA; recombinase A
LAB52_07810 DNA polymerase I
LAB52_02005 ruvA; Holliday junction DNA helicase RuvA
LAB52_02010 ruvB; Holliday junction DNA helicase RuvB
LAB52_00680 putative transcriptional regulator
LAB52_06745 ATP-dependent DNA helicase RecG
LAB52_04120 exodeoxyribonuclease V subunit alpha
LAB52_04770 DNA polymerase III, alpha subunit
LAB52_06460 DNA polymerase III, alpha subunit
LAB52_00010 DNA polymerase III subunit beta
LAB52_01840 DNA polymerase III subunits gamma and tau
LAB52_04190 DNA polymerase III, delta subunit
LAB52_01870 DNA polymerase III, delta subunit
LAB52_03495 DNA polymerase III subunit alpha
LAB52_08260 DNA polymerase III
LAB52_06810 Primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:lay03000]
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03021 Transcription machinery [BR:lay03021]
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03019 Messenger RNA biogenesis [BR:lay03019]
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03041 Spliceosome
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03011 Ribosome [BR:lay03011]
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03009 Ribosome biogenesis [BR:lay03009]
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03016 Transfer RNA biogenesis [BR:lay03016]
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03012 Translation factors [BR:lay03012]
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03110 Chaperones and folding catalysts [BR:lay03110]
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04131 Membrane trafficking [BR:lay04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:lay03032]
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03036 Chromosome and associated proteins [BR:lay03036]
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03400 DNA repair and recombination proteins [BR:lay03400]
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LAB52_01255 S-methyltransferase
LAB52_00630 methylated-DNA-protein-cysteineS-methyltransferase
LAB52_03470 uracil-DNA glycosylase
LAB52_00615 putative 3-methyladenine DNA glycosylase
LAB52_05915 endonuclease III
LAB52_02170 mutator protein
LAB52_06055 putative mutator protein
LAB52_08070 hydrolase, MutT/Nudix family protein
LAB52_01675 dUTPase
LAB52_06610 Uracil-DNA glycosylase family protein
LAB52_00790 DNA-3-methyladenine glycosidase
LAB52_07805 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
LAB52_00235 Exodeoxyribonuclease III
LAB52_06380 single-stranded-DNA-specific exonuclease
LAB52_02700 DNA ligase
LAB52_07810 DNA polymerase I
LAB52_05610 excinuclease ATPase subunit
LAB52_03395 excinuclease ABC subunit A
LAB52_03390 excinuclease ABC subunit B
LAB52_04725 uvrC; excinuclease ABC subunit C
LAB52_02695 ATP-dependent helicase
LAB52_08395 ATP-dependent DNA helicase
LAB52_01405 rpoB; DNA-directed RNA polymerase subunit beta
LAB52_01410 DNA-directed RNA polymerase subunit beta'
LAB52_01570 DNA-directed RNA polymerase subunit alpha
LAB52_01195 DNA-directed RNA polymerase subunit delta
LAB52_06815 rpoZ; DNA-directed RNA polymerase subunit omega
LAB52_01345 transcription-repair coupling factor
LAB52_01995 DNA mismatch repair protein MutS
LAB52_02060 DNA mismatch repair protein MutS2
LAB52_02000 mutL; DNA mismatch repair protein
LAB52_06855 xseA; exodeoxyribonuclease VII large subunit
LAB52_06850 exodeoxyribonuclease VII small subunit
LAB52_04770 DNA polymerase III, alpha subunit
LAB52_06460 DNA polymerase III, alpha subunit
LAB52_00010 DNA polymerase III subunit beta
LAB52_04190 DNA polymerase III, delta subunit
LAB52_01870 DNA polymerase III, delta subunit
LAB52_03495 DNA polymerase III subunit alpha
LAB52_08260 DNA polymerase III
LAB52_01840 DNA polymerase III subunits gamma and tau
LAB52_00040 single-stranded DNA-binding protein
LAB52_04120 exodeoxyribonuclease V subunit alpha
LAB52_03285 recA; recombinase A
LAB52_02005 ruvA; Holliday junction DNA helicase RuvA
LAB52_02010 ruvB; Holliday junction DNA helicase RuvB
LAB52_06810 Primosomal protein N'
LAB52_01680 DNA repair protein RadA
LAB52_00020 recF; recombination protein F
LAB52_00680 putative transcriptional regulator
LAB52_06745 ATP-dependent DNA helicase RecG
LAB52_06085 DNA repair protein recO
LAB52_01850 recR; recombination protein RecR
LAB52_06835 DNA repair protein recn
LAB52_05905 recU; Holliday junction-specific endonuclease
LAB52_05940 ATP-dependent helicase/nuclease subunit A
LAB52_05945 ATP-dependent exonuclease subunit B
LAB52_05115 CRISPR-associated protein Cas1
LAB52_00030 DNA gyrase subunit A
LAB52_00025 gyrB; DNA gyrase subunit B
LAB52_04895 DNA topoisomerase I
LAB52_04840 DNA-binding protein II HB
LAB52_02025 DNA polymerase IV
LAB52_02615 Nucleotidyltransferase/DNA polymerase for DNA repair
LAB52_06600 LexA repressor
LAB52_03125 recX; recombination regulator RecX
LAB52_05935 ATP-dependent DNA helicase
LAB52_02300 ATP-dependent helicase
LAB52_02030 hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:lay03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Lactobacillus amylovorus GRL1118