|
KO |
Eukaryotic type
|
|
|
Prokaryotic type
|
SSBR (single strand breaks repair)
|
DSBR (double strand breaks repair)
|
HR (homologous recombination)
|
RecBC pathway proteins
|
lpg1801 recA; RecA bacterial DNA recombination protein
lpg1288 ruvA; Holliday junction DNA helicase RuvA
lpg1576 ruvB; Holliday junction DNA helicase RuvB
lpg1287 ruvC; crossover junction endodeoxyribonuclease RuvC
lpg2866 primosomal protein N'
|
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
|
RecFOR pathway proteins
|
lpg1801 recA; RecA bacterial DNA recombination protein
lpg2326 radA; DNA repair protein RadA
lpg0003 DNA recombination and repair protein ATPase RecF
lpg2033 recG; ATP dependent DNA helicase RecG
lpg2559 recG; ATP-dependent DNA helicase
lpg1461 recJ; single stranded DNA specific exonuclease RecJ
lpg0943 recO; DNA repair protein RecO
lpg2756 recR; recombinational DNA repair protein RecR
lpg2824 recN; DNA repair protein RecN
lpg1187 rdgC; exonuclease involved in removal of stalled replication fork
lpg1288 ruvA; Holliday junction DNA helicase RuvA
lpg1576 ruvB; Holliday junction DNA helicase RuvB
lpg1287 ruvC; crossover junction endodeoxyribonuclease RuvC
|
K03553 recA; recombination protein RecA
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
|
AddAB pathway proteins
|
Other HR factor
|
Archaeal homologous recombinant proteins
|
NHEJ (non-homologous end-joining)
|
TLS (translesion DNA synthesis) factors
|
Other factors with a suspected DNA repair function
|