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09100 Metabolism
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:pdk03000]
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03021 Transcription machinery [BR:pdk03021]
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03019 Messenger RNA biogenesis [BR:pdk03019]
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03041 Spliceosome
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03011 Ribosome [BR:pdk03011]
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03009 Ribosome biogenesis [BR:pdk03009]
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PADK2_21840 rnc; ribonuclease III
PADK2_25375 putative serine/threonine protein kinase
PADK2_26245 oligoribonuclease
PADK2_21835 era; GTPase Era
PADK2_24260 obgE; GTPase CgtA
PADK2_25085 suppressor protein DksA
PADK2_29420 putative C4-type zinc finger protein, DksA/TraR family
PADK2_25195 nusA; transcription elongation factor NusA
PADK2_04065 nusB; transcription antitermination protein NusB
PADK2_03295 nusG; transcription antitermination protein NusG
PADK2_22045 putative pseudouridylate synthase
PADK2_02985 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
PADK2_00085 16S rRNA methyltransferase B
PADK2_24580 ribosomal RNA small subunit methyltransferase C
PADK2_01860 putative methyltransferase
PADK2_02110 16S ribosomal RNA methyltransferase RsmE
PADK2_29560 gidB; 16S rRNA methyltransferase GidB
PADK2_23030 16S rRNA m(4)C1402 methyltransferase
PADK2_23040 putative methyltransferase
PADK2_05940 hypothetical protein
PADK2_19840 rRNA methyltransferase
PADK2_26170 putative rRNA methylase
PADK2_25230 cell division protein FtsJ
PADK2_05120 23S rRNA mA1618 methyltransferase
PADK2_24525 hypothetical protein
PADK2_04305 rRNA large subunit methyltransferase
PADK2_01775 SAM-dependent methyltransferase
PADK2_18675 methyltransferase
PADK2_26590 hypothetical protein
PADK2_17900 putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase
PADK2_05295 hypothetical protein
PADK2_16460 ribosomal RNA large subunit methyltransferase N
PADK2_21040 rumA; 23S rRNA m(5)U1939 methyltransferase
PADK2_08095 ribosomal large subunit pseudouridine synthase A
PADK2_15435 putative pseudouridylate synthase
PADK2_08440 putative pseudouridine synthase
PADK2_09480 ribosomal large subunit pseudouridine synthase C
PADK2_24145 pseudouridine synthase
PADK2_04485 putative pseudouridine synthase
PADK2_20130 hypothetical protein
PADK2_24850 ribosomal-protein-alanine acetyltransferase
PADK2_15995 ribosomal protein alanine acetyltransferase
PADK2_27505 ribosomal protein S6 modification protein
PADK2_08085 putative ribosomal-protein-serine acetyltransferase
PADK2_05615 rimM; 16S rRNA-processing protein RimM
PADK2_21125 rimO; ribosomal protein S12 methylthiotransferase
PADK2_16005 hypothetical protein
PADK2_25735 prmA; ribosomal protein L11 methyltransferase
PADK2_17315 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
PADK2_11510 hypothetical protein
PADK2_09475 ribonuclease E
PADK2_23315 ribonuclease G
PADK2_02035 Holliday junction resolvase-like protein
PADK2_02285 ATP-dependent RNA helicase DbpA
PADK2_10175 putative ATP-dependent RNA helicase
PADK2_26250 GTPase RsgA
PADK2_05330 GTP-binding protein Der
PADK2_26205 GTP-binding protein HflX
PADK2_00110 putative translation factor
PADK2_28425 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
PADK2_25185 rbfA; ribosome-binding factor A
PADK2_25200 ribosome maturation protein RimP
PADK2_04300 hypothetical protein
PADK2_04410 metal-binding heat shock protein
PADK2_25235 putative RNA-binding protein
PADK2_23295 hypothetical protein
PADK2_09095 ribosome modulation factor
PADK2_23245 putative ribosomal subunit interface protein
PADK2_24820 GTP-binding protein YchF
PADK2_09500 hypothetical protein
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K03685 rnc; ribonuclease III [EC:3.1.26.3]
K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; RNA polymerase-binding transcription factor
K06204 dksA; RNA polymerase-binding transcription factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
K02860 rimM; 16S rRNA processing protein RimM
K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K09889 yjgA; ribosome-associated protein
K03812 rmf; ribosome modulation factor
K05808 hpf; ribosome hibernation promoting factor
K06942 ychF; ribosome-binding ATPase
K07040 yceD; DUF177 domain-containing protein
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03016 Transfer RNA biogenesis [BR:pdk03016]
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03012 Translation factors [BR:pdk03012]
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03110 Chaperones and folding catalysts [BR:pdk03110]
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04131 Membrane trafficking [BR:pdk04131]
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04121 Ubiquitin system [BR:pdk04121]
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03051 Proteasome [BR:pdk03051]
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03032 DNA replication proteins [BR:pdk03032]
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03036 Chromosome and associated proteins [BR:pdk03036]
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03400 DNA repair and recombination proteins [BR:pdk03400]
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03029 Mitochondrial biogenesis [BR:pdk03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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