KEGG Orthology (KO) - Pseudomonas aeruginosa DK2

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:pdk03000]
     03021 Transcription machinery [BR:pdk03021]
     03019 Messenger RNA biogenesis [BR:pdk03019]
     03041 Spliceosome
     03011 Ribosome [BR:pdk03011]
     03009 Ribosome biogenesis [BR:pdk03009]
       PADK2_21840 rnc; ribonuclease III
       PADK2_25375 putative serine/threonine protein kinase
       PADK2_26245 oligoribonuclease
       PADK2_21835 era; GTPase Era
       PADK2_24260 obgE; GTPase CgtA
       PADK2_25085 suppressor protein DksA
       PADK2_29420 putative C4-type zinc finger protein, DksA/TraR family
       PADK2_25195 nusA; transcription elongation factor NusA
       PADK2_04065 nusB; transcription antitermination protein NusB
       PADK2_03295 nusG; transcription antitermination protein NusG
       PADK2_22045 putative pseudouridylate synthase
       PADK2_02985 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
       PADK2_00085 16S rRNA methyltransferase B
       PADK2_24580 ribosomal RNA small subunit methyltransferase C
       PADK2_01860 putative methyltransferase
       PADK2_02110 16S ribosomal RNA methyltransferase RsmE
       PADK2_29560 gidB; 16S rRNA methyltransferase GidB
       PADK2_23030 16S rRNA m(4)C1402 methyltransferase
       PADK2_23040 putative methyltransferase
       PADK2_05940 hypothetical protein
       PADK2_19840 rRNA methyltransferase
       PADK2_26170 putative rRNA methylase
       PADK2_25230 cell division protein FtsJ
       PADK2_05120 23S rRNA mA1618 methyltransferase
       PADK2_24525 hypothetical protein
       PADK2_04305 rRNA large subunit methyltransferase
       PADK2_01775 SAM-dependent methyltransferase
       PADK2_18675 methyltransferase
       PADK2_26590 hypothetical protein
       PADK2_17900 putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase
       PADK2_05295 hypothetical protein
       PADK2_16460 ribosomal RNA large subunit methyltransferase N
       PADK2_21040 rumA; 23S rRNA m(5)U1939 methyltransferase
       PADK2_08095 ribosomal large subunit pseudouridine synthase A
       PADK2_15435 putative pseudouridylate synthase
       PADK2_08440 putative pseudouridine synthase
       PADK2_09480 ribosomal large subunit pseudouridine synthase C
       PADK2_24145 pseudouridine synthase
       PADK2_04485 putative pseudouridine synthase
       PADK2_20130 hypothetical protein
       PADK2_24850 ribosomal-protein-alanine acetyltransferase
       PADK2_15995 ribosomal protein alanine acetyltransferase
       PADK2_27505 ribosomal protein S6 modification protein
       PADK2_08085 putative ribosomal-protein-serine acetyltransferase
       PADK2_05615 rimM; 16S rRNA-processing protein RimM
       PADK2_21125 rimO; ribosomal protein S12 methylthiotransferase
       PADK2_16005 hypothetical protein
       PADK2_25735 prmA; ribosomal protein L11 methyltransferase
       PADK2_17315 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
       PADK2_11510 hypothetical protein
       PADK2_09475 ribonuclease E
       PADK2_23315 ribonuclease G
       PADK2_02035 Holliday junction resolvase-like protein
       PADK2_02285 ATP-dependent RNA helicase DbpA
       PADK2_10175 putative ATP-dependent RNA helicase
       PADK2_26250 GTPase RsgA
       PADK2_05330 GTP-binding protein Der
       PADK2_26205 GTP-binding protein HflX
       PADK2_00110 putative translation factor
       PADK2_28425 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
       PADK2_25185 rbfA; ribosome-binding factor A
       PADK2_25200 ribosome maturation protein RimP
       PADK2_04300 hypothetical protein
       PADK2_04410 metal-binding heat shock protein
       PADK2_25235 putative RNA-binding protein
       PADK2_23295 hypothetical protein
       PADK2_09095 ribosome modulation factor
       PADK2_23245 putative ribosomal subunit interface protein
       PADK2_24820 GTP-binding protein YchF
       PADK2_09500 hypothetical protein
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; RNA polymerase-binding transcription factor
K06204 dksA; RNA polymerase-binding transcription factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
K02860 rimM; 16S rRNA processing protein RimM
K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K09889 yjgA; ribosome-associated protein
K03812 rmf; ribosome modulation factor
K05808 hpf; ribosome hibernation promoting factor
K06942 ychF; ribosome-binding ATPase
K07040 yceD; DUF177 domain-containing protein
     03016 Transfer RNA biogenesis [BR:pdk03016]
     03012 Translation factors [BR:pdk03012]
     03110 Chaperones and folding catalysts [BR:pdk03110]
     04131 Membrane trafficking [BR:pdk04131]
     04121 Ubiquitin system [BR:pdk04121]
     03051 Proteasome [BR:pdk03051]
     03032 DNA replication proteins [BR:pdk03032]
     03036 Chromosome and associated proteins [BR:pdk03036]
     03400 DNA repair and recombination proteins [BR:pdk03400]
     03029 Mitochondrial biogenesis [BR:pdk03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 24, 2024