Transfer RNA Biogenesis - Ralstonia pickettii 12D

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 Eukaryotic type
 
 Prokaryotic type
   5'processing factors
   3'processing and CCA adding factors
   tRNA spricing factors
   tRNA transport factors
   Aminoacyl-tRNA synthetases (AARSs)
   tRNA modification factors
     Deaminases
     Dihydorouridine synthases
     Methylthiotransferases
     Methyltransferases
     Psudouridine synthases
     Thiolation factors
     KEOPS/EKC complex
     Other tRNA modification factors
       Rpic12D_3198 glucose inhibited division protein A
       Rpic12D_2431 tRNA delta(2)-isopentenylpyrophosphate transferase
       Rpic12D_1538 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
       Rpic12D_2546 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
       Rpic12D_0731 exsB protein
       Rpic12D_1395 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
       Rpic12D_1394 conserved hypothetical protein
       Rpic12D_0339 7-cyano-7-deazaguanine reductase
       Rpic12D_2411 iron-sulfur cluster binding protein
       Rpic12D_2547 queuine tRNA-ribosyltransferase
       Rpic12D_1105 tRNA(Ile)-lysidine synthetase
       Rpic12D_1306 peptidase M22 glycoprotease
       Rpic12D_0484 Sua5/YciO/YrdC/YwlC family protein
       Rpic12D_2031 metalloendopeptidase, glycoprotease family
       Rpic12D_2410 protein of unknown function UPF0079
       Rpic12D_0792 UBA/THIF-type NAD/FAD binding protein
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] 
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] 
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] 
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] 
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] 
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] 
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] 
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] 
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] 
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB 
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] 
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE 
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase 
   tRNA degradation factors

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Last updated: February 29, 2024