09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:srn03030]
03410 Base excision repair [PATH:srn03410]
03420 Nucleotide excision repair [PATH:srn03420]
03430 Mismatch repair [PATH:srn03430]
03440 Homologous recombination [PATH:srn03440]
03450 Non-homologous end-joining [PATH:srn03450]
A4G23_03929 ykoV; putative DNA repair protein YkoV A4G23_03928 Putative DNA ligase-like protein
K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:srn03000]
03021 Transcription machinery [BR:srn03021]
03019 Messenger RNA biogenesis [BR:srn03019]
03041 Spliceosome
03011 Ribosome [BR:srn03011]
03009 Ribosome biogenesis [BR:srn03009]
03016 Transfer RNA biogenesis [BR:srn03016]
03012 Translation factors [BR:srn03012]
03110 Chaperones and folding catalysts [BR:srn03110]
04131 Membrane trafficking [BR:srn04131]
04121 Ubiquitin system [BR:srn04121]
03051 Proteasome [BR:srn03051]
03032 DNA replication proteins [BR:srn03032]
03036 Chromosome and associated proteins [BR:srn03036]
03400 DNA repair and recombination proteins [BR:srn03400]
A4G23_04904 ogt_4; Methylated-DNA--protein-cysteine methyltransferase A4G23_03298 ogt_2; Methylated-DNA--protein-cysteine methyltransferase A4G23_01172 ogt_1; Methylated-DNA--protein-cysteine methyltransferase A4G23_05086 phrB; Deoxyribodipyrimidine photo-lyase A4G23_00413 ung_1; Uracil-DNA glycosylase A4G23_00606 ung_2; Uracil-DNA glycosylase A4G23_01021 3-methyladenine DNA glycosylase A4G23_03140 mutY; A/G-specific adenine glycosylase A4G23_03018 pdg; Ultraviolet N-glycosylase/AP lyase A4G23_02400 hypothetical protein A4G23_02546 ndx1; Diadenosine hexaphosphate hydrolase A4G23_00994 Bifunctional NMN adenylyltransferase/Nudix hydrolase A4G23_03647 Bifunctional NMN adenylyltransferase/Nudix hydrolase A4G23_04327 Bifunctional NMN adenylyltransferase/Nudix hydrolase A4G23_05266 NUDIX domain protein A4G23_03726 hypothetical protein A4G23_02377 mutT4; Putative mutator protein MutT4 A4G23_01761 nudG; CTP pyrophosphohydrolase A4G23_04360 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase A4G23_03297 alkB; Alpha-ketoglutarate-dependent dioxygenase AlkB A4G23_00567 mug; G/U mismatch-specific DNA glycosylase A4G23_00195 bag_1; IgA FC receptor precursor A4G23_04903 alkA; DNA-3-methyladenine glycosylase 2 A4G23_03756 tag; DNA-3-methyladenine glycosylase 1 A4G23_04136 fpg1; Formamidopyrimidine-DNA glycosylase 1 A4G23_05211 fpg2; putative formamidopyrimidine-DNA glycosylase-like protein A4G23_04275 nei; Endonuclease 8 A4G23_01706 nei1; Endonuclease 8 1 A4G23_02202 exoA; Exodeoxyribonuclease A4G23_04873 xthA; Exodeoxyribonuclease III A4G23_01301 nfo; putative endonuclease 4 A4G23_05005 nfi; Endonuclease V A4G23_04061 ligA; DNA ligase A4G23_01194 polA_1; DNA polymerase I A4G23_01163 uvrA_1; UvrABC system protein A A4G23_01170 uvrB; UvrABC system protein B A4G23_01161 uvrC; UvrABC system protein C A4G23_03799 pcrA_2; ATP-dependent DNA helicase PcrA A4G23_03803 uvrD2; ATP-dependent DNA helicase UvrD2 A4G23_03469 uvrD1; ATP-dependent DNA helicase UvrD1 A4G23_03321 rpoB; DNA-directed RNA polymerase subunit beta A4G23_03322 rpoC; DNA-directed RNA polymerase subunit beta' A4G23_03395 rpoA; DNA-directed RNA polymerase subunit alpha A4G23_00722 rpoZ; DNA-directed RNA polymerase subunit omega A4G23_02137 mfd; Transcription-repair-coupling factor A4G23_03704 xseA; Exodeoxyribonuclease 7 large subunit A4G23_03705 xseB; Exodeoxyribonuclease 7 small subunit A4G23_01248 dnaE; DNA polymerase III subunit alpha A4G23_02738 dnaN_2; DNA polymerase III subunit beta A4G23_01626 hypothetical protein A4G23_03044 dnaX_2; DNA polymerase III subunit tau A4G23_01063 dnaQ; DNA polymerase III subunit epsilon A4G23_00779 DNA polymerase III subunit epsilon A4G23_04674 polC; DNA polymerase III PolC-type A4G23_02637 dnaX_1; DNA polymerase III subunit tau A4G23_01746 ssb1; Single-stranded DNA-binding protein 1 A4G23_02766 ssb2; Single-stranded DNA-binding protein 2 A4G23_00552 vsr; Very short patch repair protein A4G23_01788 recD2_2; ATP-dependent RecD-like DNA helicase A4G23_04288 recombinase A A4G23_00763 ruvA; Holliday junction ATP-dependent DNA helicase RuvA A4G23_00762 ruvB; Holliday junction ATP-dependent DNA helicase RuvB A4G23_00764 ruvC; Crossover junction endodeoxyribonuclease RuvC A4G23_00719 priA_1; Primosomal protein N' A4G23_00022 sbcC_1; Nuclease SbcCD subunit C A4G23_00580 sbcC_2; Nuclease SbcCD subunit C A4G23_05533 sbcC_3; Nuclease SbcCD subunit C A4G23_00581 sbcD_2; Nuclease SbcCD subunit D A4G23_00023 sbcD_1; Nuclease SbcCD subunit D A4G23_05532 sbcD_3; Nuclease SbcCD subunit D A4G23_03144 hypothetical protein A4G23_02736 recF; DNA replication and repair protein RecF A4G23_04129 recG; ATP-dependent DNA helicase RecG A4G23_03937 Divergent AAA domain protein A4G23_01599 recO; DNA repair protein RecO A4G23_02993 recR; Recombination protein RecR A4G23_01008 recN; DNA repair protein RecN A4G23_04619 ygbT; CRISPR-associated endonuclease Cas1 A4G23_03929 ykoV; putative DNA repair protein YkoV A4G23_03928 Putative DNA ligase-like protein A4G23_02733 gyrA_1; DNA gyrase subunit A A4G23_04336 gyrA_2; DNA gyrase subunit A A4G23_02734 gyrBR; DNA gyrase subunit B, novobiocin-resistant A4G23_04334 gyrB; DNA gyrase subunit B A4G23_03042 topA; DNA topoisomerase 1 A4G23_00222 Eukaryotic DNA topoisomerase I, catalytic core A4G23_04117 hypothetical protein A4G23_01973 hup; DNA-binding protein HU A4G23_00325 recQ_1; ATP-dependent DNA helicase RecQ A4G23_04637 recQ_3; ATP-dependent DNA helicase RecQ A4G23_04321 recQ_2; ATP-dependent DNA helicase RecQ A4G23_00627 dinB_1; DNA polymerase IV A4G23_04310 lexA; LexA repressor A4G23_00968 dnaE2; Error-prone DNA polymerase A4G23_04289 recX; Regulatory protein RecX A4G23_00275 polX_2; DNA polymerase/3'-5' exonuclease PolX A4G23_04309 dinG; putative ATP-dependent helicase DinG A4G23_04277 putative ATP-dependent helicase Lhr A4G23_03481 nudF_2; ADP-ribose pyrophosphatase A4G23_01002 nudF_1; ADP-ribose pyrophosphatase A4G23_04312 nrdJ; Vitamin B12-dependent ribonucleotide reductase A4G23_03842 nrdZ; Ribonucleoside-diphosphate reductase NrdZ A4G23_03841 nrdB; Ribonucleoside-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K03546 sbcC; DNA repair protein SbcC/Rad50 K03546 sbcC; DNA repair protein SbcC/Rad50 K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K15342 cas1; CRISP-associated protein Cas1 K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K02347 polX; DNA polymerase (family X) K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:srn03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Streptomyces rubrolavendulae KEGG Orthology (KO) - Streptomyces rubrolavendulae