| Module |
Name |
Phenotype |
| M00161 |
Photosystem II |
Photosynthetic organism |
| M00163 |
Photosystem I |
| M00597 |
Anoxygenic photosystem II |
| M00598 |
Anoxygenic photosystem I |
| M00165 |
Reductive pentose phosphate cycle (Calvin cycle) |
Carbon fixing organism |
| M00173 |
Reductive citrate cycle (Arnon-Buchanan cycle) |
| M00377 |
Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway) |
| M00376 |
3-Hydroxypropionate bi-cycle |
| M00374 |
Dicarboxylate-hydroxybutyrate cycle |
| M00375 |
Hydroxypropionate-hydroxybutylate cycle |
| M00595 |
Thiosulfate oxidation by SOX complex, thiosulfate => sulfate |
Sulfur oxidizing organism |
| K16952 |
sulfur oxygenase/reductase |
| M00596 |
Dissimilatory sulfate reduction, sulfate => H2S |
Sulfate reducing organism |
| M00567 |
Methanogenesis, CO2 => methane |
Methanogen |
| M00356 |
Methanogenesis, methanol => methane |
| M00357 |
Methanogenesis, acetate => methane |
| M00174 |
Methane oxidation, methanotroph, methane => formaldehyde |
Methanotroph |
| M00344 |
Formaldehyde assimilation, xylulose monophosphate pathway |
Methylotroph |
| M00345 |
Formaldehyde assimilation, ribulose monophosphate pathway |
| M00346 |
Formaldehyde assimilation, serine pathway |
| M00528 |
Nitrification, ammonia => nitrite |
Ammonia oxidizing organism |
Photosynthetic and Chemosynthetic Capacities