Linked Databases in DBGET

KEGG GENES

Source database (24 DBs)
Database	Number of links
Database	Total	Equivalent	Forward	Reverse	Indirect
`brite`	`28783827`			`28783827`
`compound`	`27695283`				`27695283`
`disease`	`11304`		`5658`	`5646`
`drug`	`24543`		`12275`	`12268`
`embl`	`2217832`	`2217832`
`enzyme`	`11900019`		`5955427`	`5944592`
`genbank`	`2222166`	`2217832`		`4334`
`genome`	`27136550`			`27136550`
`module`	`3629411`			`3629411`
`ncbi-geneid`	`18879064`	`9439532`		`9439532`
`ncbi-proteinid`	`51567442`	`25783721`		`25783721`
`network`	`9572`		`4784`	`4788`
`oc`	`24782092`		`24782092`
`omim`	`37516`	`15679`	`6099`	`15738`
`orthology`	`25446374`		`12723378`	`12722996`
`pathway`	`19730205`			`19730205`
`pdb`	`3`		`3`
`pfam`	`93377407`			`93377407`
`pubmed`	`4242`			`4242`
`reaction`	`9720794`				`9720794`
`refseq`	`25532510`	`24069682`		`1462828`
`swissprot`	`1506765`	`502152`	`502715`	`501898`
`unigene`	`561320`	`561320`
`uniprot`	`52171194`	`17550423`	`17020101`	`17600670`

Target database (92 DBs)
Database	Number of links
Database	Total	Equivalent	Forward	Reverse	Indirect
`animalqtldb`	`1`		`1`
`aphidbase`	`8581`		`8581`
`apidb_cryptodb`	`3805`		`3805`
`araport`	`32430`		`32430`
`asap`	`4459`		`4459`
`beebase`	`8503`		`8503`
`beetlebase`	`629`		`629`
`bgd-bta`	`14136`		`14136`
`brc-dna`	`128366`			`128366`
`brc-epd`	`22642`			`22642`
`brite`	`28783827`		`28783827`
`bsorf`	`4017`		`4017`
`cambridge`	`7264`		`7264`
`cgnc`	`20411`		`20411`
`compound`	`27695283`				`27695283`
`cyanobase`	`79966`		`79966`
`cyorf`	`103939`		`103939`
`dictybase`	`13243`		`13243`
`disease`	`11304`		`5646`	`5658`
`drug`	`24543`		`12268`	`12275`
`ecocyc`	`4212`		`4212`
`embl`	`2217832`	`2217832`
`ensembl`	`456642`		`456642`
`ensemblgenomes-gn`	`1198`		`1198`
`ensemblgenomes-tr`	`1198`		`1198`
`enzyme`	`11900019`		`5944592`	`5955427`
`flybase`	`201642`		`201642`
`genbank`	`2222166`	`2217832`	`4334`
`genedb`	`86105`		`86105`
`genes`	`70678`		`35339`	`35339`
`genome`	`27136550`		`27136550`
`genoscope`	`39580`		`39580`
`hgnc`	`26536`		`26536`
`imgt`	`1`		`1`
`inra`	`7496`		`7496`
`jamstec`	`3550`		`3550`
`jgi`	`852362`		`852362`
`kitasato`	`22787`		`22787`
`lncc_brazil`	`6567`		`6567`
`maizegdb`	`62`		`62`
`mips`	`32430`		`32430`
`mirbase`	`14912`		`14912`
`module`	`3629411`		`3629411`
`nagahama-h`	`1703`	`1703`
`nagahama-s`	`674`	`674`
`nasoniabase`	`8328`		`8328`
`ncbi-geneid`	`18879064`	`9439532`	`9439532`
`ncbi-proteinid`	`51567442`	`25783721`	`25783721`
`network`	`9572`		`4788`	`4784`
`nih_japan`	`7051`		`7051`
`nite`	`85399`		`85399`
`oc`	`24782092`			`24782092`
`omim`	`37516`	`15679`	`15738`	`6099`
`orcae`	`285`		`285`
`orthology`	`25446374`		`12722996`	`12723378`
`oryzabase`	`930`		`930`
`pasteur`	`43426`		`43426`
`pathogenesis`	`5629`		`5629`
`pathway`	`19730205`		`19730205`
`pdb`	`3`			`3`
`pfam`	`93377407`		`93377407`
`pgdbj`	`508978`	`508978`
`pharos`	`18769`		`18769`
`plasmodb`	`4812`		`4812`
`pombase`	`5110`		`5110`
`pronit`	`7591`	`7591`
`protherm`	`8313`	`8313`
`pubmed`	`4242`		`4242`
`rap-db`	`34709`		`34709`
`reaction`	`9720794`				`9720794`
`refgene`	`202571872`			`202571872`
`refseq`	`25532510`	`24069682`	`1462828`
`regulondb`	`4398`		`4398`
`rgd`	`32412`		`32412`
`rhizobase`	`93397`		`93397`
`roseobase`	`12472`		`12472`
`sgd`	`6292`		`6292`
`shibase_china`	`13953`		`13953`
`swissprot`	`1506765`	`502152`	`501898`	`502715`
`tair`	`27498`		`27498`
`tax`	`327028`		`327028`
`tgd`	`20934`		`20934`
`tuberculist`	`3916`		`3916`
`unam`	`1613`		`1613`
`unigene`	`561320`	`561320`
`uniprot`	`52171194`	`17550423`	`17600670`	`17020101`
`vectorbase`	`62710`		`62710`
`vega`	`57493`		`57493`
`vgnc`	`53191`		`53191`
`wormbase`	`39583`		`39583`
`xenbase`	`33377`		`33377`
`zfin`	`22278`		`22278`

UniProt

Source database (15 DBs)
Database	Number of links
Database	Total	Equivalent	Forward	Reverse	Indirect
`embl`	`138992071`			`138992071`
`enzyme`	`15308932`			`15308932`
`epd`	`4740`		`4740`
`genes`	`52171194`	`17550423`	`17600670`	`17020101`
`interpro`	`328012546`			`328012546`
`ncbi-geneid`	`10967382`			`10967382`
`omim`	`20989`			`20989`
`orthology`	`7688364`			`7688364`
`pdb`	`377288`		`172179`	`205109`
`pfam`	`174505641`		`47957589`	`126548052`
`pmd`	`45006`		`45006`
`prosite`	`65107348`		`541050`	`64566298`
`pubmed`	`41247895`			`41247895`
`refseq`	`45751128`			`45751128`
`unigene`	`974074`			`974074`

Target database (40 DBs)
Database	Number of links
Database	Total	Equivalent	Forward	Reverse	Indirect
`all`	`7284`		`7284`
`brenda`	`22448`		`22448`
`cazy`	`138320`		`138320`
`chembl-up`	`7832`		`7832`
`dictybase`	`12199`		`12199`
`drugbank`	`19516`		`19516`
`embl`	`138992071`		`138992071`
`ensembl-up`	`5935090`		`5935090`
`enzyme`	`15308932`		`15308932`
`epd`	`4740`			`4740`
`flybase`	`214479`		`214479`
`genes`	`52171194`	`17550423`	`17020101`	`17600670`
`go`	`230477553`		`230477553`
`hgnc`	`72340`		`72340`
`interpro`	`328012546`		`328012546`
`maizegdb-up`	`509`		`509`
`mavd`	`13`		`13`
`mgi-mmu`	`79066`		`79066`
`ncbi-geneid`	`10967382`		`10967382`
`omim`	`20989`		`20989`
`orthology`	`7688364`		`7688364`
`pasteur-up`	`5204`		`5204`
`pdb`	`377288`		`205109`	`172179`
`pfam`	`174505641`		`126548052`	`47957589`
`pmd`	`45006`			`45006`
`prosite`	`65107348`		`64566298`	`541050`
`pubmed`	`41247895`		`41247895`
`refseq`	`45751128`		`45751128`
`rgd`	`29593`		`29593`
`sabio-rk-up`	`4579`		`4579`
`sgd-up`	`6746`		`6746`
`smart`	`30528636`		`30528636`
`tair`	`26363`		`26363`
`tc`	`14992`		`14992`
`tuberculist`	`3190`		`3190`
`unigene`	`974074`		`974074`
`vectorbase`	`581092`		`581092`
`wormbase`	`61883`		`61883`
`xenbase`	`39149`		`39149`
`zfin`	`57836`		`57836`