ID or terms query


OC.257216 [Bradyrhizobium] (16 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110765 Bradyrhizobium.8682   bja.945 bja:bll2021 nodD2; transcriptional regulator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Bradyrhizobium.7207   bja.946 bja:bll2023 nodD1; transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Bradyrhizobium.7207 Bradyrhizobium_japonicum.6721 bju.7750 bju:BJ6T_78310 nodD1; transcriptional regulatory protein; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Bradyrhizobium.7207 Bradyrhizobium_japonicum.6721 bjp.7278 bjp:RN69_38010 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110765 Bradyrhizobium.8682 Bradyrhizobium_japonicum.8049 bjp.7280 bjp:RN69_38020 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.196562 Bradyrhizobium.23349   aol.5521 aol:S58_55840 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Bradyrhizobium.7207 Bradyrhizobium_sp_.22389 brc.5670 brc:BCCGELA001_28965 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.191103 Bradyrhizobium.7208 Bradyrhizobium_sp_.22390 brc.5671 brc:BCCGELA001_28970 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Bradyrhizobium.7207   bic.4698 bic:LMTR13_24855 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Bradyrhizobium.7207   bic.4700 bic:LMTR13_24865 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.191372 Bradyrhizobium.11458   bic.5758 bic:LMTR13_30790 hypothetical protein; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.195470 Bradyrhizobium.21410 Bradyrhizobium_sp_.29864 bro.1060 bro:BRAD285_1210 nodD1; Nodulation protein D1, lysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106468 Bradyrhizobium.21448 Bradyrhizobium_sp_.29921 bro.1121 bro:BRAD285_1333 nodD2; Nodulation transcriptional regulatory protein NodD2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.191372 Bradyrhizobium.11458 Bradyrhizobium_sp_.28717 brk.6207 brk:CWS35_32505 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Bradyrhizobium.7207   bot.563 bot:CIT37_02905 Nodulation protein D 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110765 Bradyrhizobium.8682   bot.565 bot:CIT37_02915 Nodulation protein D 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator

( plain text of OC.257216 [Bradyrhizobium] ) ( previous ver. )

Refinement of cluster

OC depth

KOs in cluster

    K14657 (15) LysR family transcriptional regulator, n...

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Organism selection


Distribution of taxonomic categories

sequence organism Bradyrhizobium KO

Neighbor clusters

OC.257180-257195 OC.257196 (20) OC.257197 (1) OC.257198 (10) OC.257199 (76) OC.257200 (428) OC.257201 (67) OC.257202-257211 OC.257212 (168) OC.257213 (159) OC.257214 (5) OC.257215 (1) OC.257216 (211) OC.257217 (2) OC.257218 (6) OC.257219 (22) OC.257220 (1) OC.257159-257195 OC.257221-257305