ID or terms query


OC.257216 [Pseudomonas] (11 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282   pre.2604 pre:PCA10_25790 putative LysR family transcriptional regulator
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_putida.12855 ppu.3115 ppu:PP_3196 nodulation protein d1
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_putida.12855 ppx.3773 ppx:T1E_3801 nodD1; nodulation protein d1
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.175991 Pseudomonas.53972 Pseudomonas_fluorescens.1275 pfs.1888 pfs:PFLU_1947 nodD; nodulation protein D; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.175991 Pseudomonas.53972 Pseudomonas_fluorescens.1275 pfe.825 pfe:PSF113_0821 Nodulation protein D
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95130 Pseudomonas.67355   pazo.3855 pazo:AYR47_20540 nodulation protein NfeD
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_brassicacearum.3173 pba.1267 pba:PSEBR_a2129 putative transcription factor, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_brassicacearum.7907 pbc.3303 pbc:CD58_17595 nodulation protein NfeD
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_sp_.46257 psv.1946 psv:PVLB_09730 nodulation protein d1
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_sp_.34683 psk.2228 psk:U771_11410 nodulation protein NfeD
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282   pkc.2428 pkc:PKB_2371 nodD1; Nodulation protein D 1

( plain text of OC.257216 [Pseudomonas] ) ( previous ver. )

Refinement of cluster

OC depth

KOs in cluster

    K14657 (1) LysR family transcriptional regulator, n...

> Pathway search
> BRITE search

Organism selection


Distribution of taxonomic categories

sequence organism Pseudomonas KO

Neighbor clusters

OC.257180-257195 OC.257196 (20) OC.257197 (1) OC.257198 (10) OC.257199 (76) OC.257200 (428) OC.257201 (67) OC.257202-257211 OC.257212 (168) OC.257213 (159) OC.257214 (5) OC.257215 (1) OC.257216 (211) OC.257217 (2) OC.257218 (6) OC.257219 (22) OC.257220 (1) OC.257159-257195 OC.257221-257305