ID or terms query

OC.257216 [Rhizobium] (42 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106466 Rhizobium.6691 Rhizobium_etli.905 ret.4813 ret:RHE_PD00275 nod transcriptional regulator protein, LysR family; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Rhizobium.9471 Rhizobium_etli.933 ret.4848 ret:RHE_PD00316 nod transcriptional regulator protein, LysR family; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.155801 Rhizobium.9472 Rhizobium_etli.935 ret.4850 ret:RHE_PD00318 nod transcriptional regulator protein, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106466 Rhizobium.6691 Rhizobium_etli.905 rec.5010 rec:RHECIAT_PB0000311 nodD1; nod transcriptional regulator protein, LysR family; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Rhizobium.9471 Rhizobium_etli.933 rec.5050 rec:RHECIAT_PB0000358 nodD2; nod transcriptional regulator protein, LysR family; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.155801 Rhizobium.9472 Rhizobium_etli.935 rec.5052 rec:RHECIAT_PB0000360 nodD3; nod transcriptional regulator protein, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.1440 Rhizobium_etli.11493 rel.5521 rel:REMIM1_PE00372 nodD-1; transcriptional regulator nodulation protein NodD 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.8923 Rhizobium_etli.5447 rel.90 rel:REMIM1_PE00477 transcriptional regulator nodulation NodD-like protein; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.8923 Rhizobium_etli.5447 rel.90 rel:REMIM1_PE00505 nodD-2; transcriptional regulator nodulation protein NodD 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106466 Rhizobium.6691 Rhizobium_etli.16430 rep.5173 rep:IE4803_PB00421 nodD-1; transcriptional regulator nodulation protein NodD 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Rhizobium.9471 Rhizobium_etli.933 rep.5213 rep:IE4803_PB00472 nodD-2; transcriptional regulator nodulation protein NodD 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.155801 Rhizobium.9472 Rhizobium_etli.935 rep.5216 rep:IE4803_PB00475 nodD-3; transcriptional regulator nodulation protein NodD 3; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.8923 Rhizobium_sp_.14222 rei.4668 rei:IE4771_PB00124 nodD-1; transcriptional regulator nodulation protein NodD 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.1440 Rhizobium_sp_.14224 rei.4670 rei:IE4771_PB00126 nodD-2; transcriptional regulator nodulation protein NodD 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106469 Rhizobium.10659 Rhizobium_leguminosarum.5985 rle.4865 rle:pRL100184 nodD; Nodulation protein D (LysR type regulator); K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106469 Rhizobium.10659 Rhizobium_leguminosarum.5985 rlt.22 rlt:Rleg2_5026 transcriptional regulator, LysR family; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106469 Rhizobium.10659 Rhizobium_leguminosarum.5985 rlt.22 rlt:Rleg2_5035 transcriptional regulator, LysR family; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106469 Rhizobium.10659 Rhizobium_leguminosarum.5985 rlg.4841 rlg:Rleg_4915 transcriptional regulator, LysR family; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106469 Rhizobium.10659 Rhizobium_leguminosarum.5985 rlb.638 rlb:RLEG3_03055 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106469 Rhizobium.10659 Rhizobium_leguminosarum.5985 rlu.125 rlu:RLEG12_00510 LysR family transcriptional regulator; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.12322   rtr.54 rtr:RTCIAT899_PB00560 nodD5; transcriptional regulator NodD5; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.12322   rtr.54 rtr:RTCIAT899_PB00640 nodD3; transcriptional regulator NodD3; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.260895 Rhizobium.37577   rtr.4046 rtr:RTCIAT899_PB01070 nodD2; transcriptional regulator NodD2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.1441   rtr.4083 rtr:RTCIAT899_PB01295 nodD1; transcriptional regulator NodD; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.11971   rtr.4131 rtr:RTCIAT899_PB01560 nodD4; transcriptional regulator NodD; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106469 Rhizobium.30145 Rhizobium_sp_.26488 rir.5056 rir:BN877_p0276 nodD2; Nodulation protein D2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Rhizobium.9471 Rhizobium_sp_.26556 rir.5124 rir:BN877_p0346 nodD1; Nodulation protein D1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.31340   rga.4307 rga:RGR602_PB00146 nodD-1; transcriptional regulator nodulation protein NodD 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.1440   rga.4314 rga:RGR602_PB00153 nodD-2; transcriptional regulator nodulation protein NodD 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106465 Rhizobium.11971   rga.4342 rga:RGR602_PB00183 nodD-3; transcriptional regulator nodulation protein NodD 3; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106466 Rhizobium.6691 Rhizobium_sp_.4304 rhn.4917 rhn:AMJ98_PC00324 nodD-1; transcriptional regulator nodulation protein NodD 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Rhizobium.9471 Rhizobium_sp_.4334 rhn.4956 rhn:AMJ98_PC00369 nodD-2; transcriptional regulator nodulation protein NodD 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.155801 Rhizobium.9472 Rhizobium_sp_.4335 rhn.4957 rhn:AMJ98_PC00370 nodD-3; transcriptional regulator nodulation protein NodD 3; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106466 Rhizobium.6691   rpha.5197 rpha:AMC79_PC00298 nodD-1; transcriptional regulator nodulation protein NodD 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Rhizobium.9471   rpha.5234 rpha:AMC79_PC00340 nodD-2; transcriptional regulator nodulation protein NodD 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.155801 Rhizobium.9472   rpha.5235 rpha:AMC79_PC00341 nodD-3; transcriptional regulator nodulation protein NodD 3; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106466 Rhizobium.6691 Rhizobium_sp_.24569 rhx.4863 rhx:AMK02_PC00316 nodD-1; transcriptional regulator nodulation protein NodD 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Rhizobium.9471 Rhizobium_sp_.4334 rhx.4899 rhx:AMK02_PC00358 nodD-2; transcriptional regulator nodulation protein NodD 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.155801 Rhizobium.9472 Rhizobium_sp_.4335 rhx.4900 rhx:AMK02_PC00359 nodD-3; transcriptional regulator nodulation protein NodD 3; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.106466 Rhizobium.6691 Rhizobium_sp_.4304 rhk.4696 rhk:Kim5_PA00399 nodD-1; transcriptional regulator nodulation protein NodD 1; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.110103 Rhizobium.9471 Rhizobium_sp_.4334 rhk.4748 rhk:Kim5_PA00466 nodD-2; transcriptional regulator nodulation protein NodD 2; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Alphaproteobacteria.155801 Rhizobium.9472 Rhizobium_sp_.4335 rhk.4750 rhk:Kim5_PA00468 nodD-3; transcriptional regulator nodulation protein NodD 3; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator

( plain text of OC.257216 [Rhizobium] ) ( previous ver. )

Refinement of cluster

OC depth

KOs in cluster

    K14657 (40) LysR family transcriptional regulator, n...

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Organism selection


Distribution of taxonomic categories

sequence organism Rhizobium KO

Neighbor clusters

OC.257180-257195 OC.257196 (20) OC.257197 (1) OC.257198 (10) OC.257199 (76) OC.257200 (428) OC.257201 (67) OC.257202-257211 OC.257212 (168) OC.257213 (159) OC.257214 (5) OC.257215 (1) OC.257216 (211) OC.257217 (2) OC.257218 (6) OC.257219 (22) OC.257220 (1) OC.257159-257195 OC.257221-257305