ID or terms query

OC.312574 [Listeria] (45 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmo.2245 lmo:lmo2244 ribosomal large subunit pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmn.2434 lmn:LM5578_2447 hypothetical protein; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmy.2391 lmy:LM5923_2398 hypothetical protein; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmt.1526 lmt:LMRG_01588 ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmoc.2313 lmoc:LMOSLCC5850_2312 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmoe.2508 lmoe:BN418_2697 Uncharacterized RNA pseudouridine synthase YhcT; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmob.2515 lmob:BN419_2700 Uncharacterized RNA pseudouridine synthase YhcT; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmod.2298 lmod:LMON_2320 Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmow.1063 lmow:AX10_05515 ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmoq.2976 lmoq:LM6179_3024 Pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmr.2333 lmr:LMR479A_2358 Pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmom.2587 lmom:IJ09_13690 pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmf.2253 lmf:LMOf2365_2277 ribosomal large subunit pseudouridine synthase, RluA family; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmc.2212 lmc:Lm4b_02271 Putative ribosomal large subunit pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmog.2274 lmog:BN389_22750 yhcT; Uncharacterized RNA pseudouridine synthase YhcT; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmp.2230 lmp:MUO_11515 ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmol.2262 lmol:LMOL312_2263 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmoj.1408 lmoj:LM220_12652 pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmoz.1482 lmoz:LM1816_10432 RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmox.1712 lmox:AX24_09320 pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmh.293 lmh:LMHCC_0298 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmq.2345 lmq:LMM7_2346 rluD; ribosomal large subunit pseudouridine synthase,RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lml.2305 lml:lmo4a_2305 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmg.62 lmg:LMKG_00063 ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lms.824 lms:LMLG_0904 ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmj.889 lmj:LMOG_00966 ribosomal large subunit pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmw.2311 lmw:LMOSLCC2755_2312 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmx.2311 lmx:LMOSLCC2372_2312 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmz.2311 lmz:LMOSLCC2482_2310 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmon.2202 lmon:LMOSLCC2376_2202 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmos.2223 lmos:LMOSLCC7179_2222 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmoo.2312 lmoo:LMOSLCC2378_2312 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmoy.2309 lmoy:LMOSLCC2479_2309 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmot.2341 lmot:LMOSLCC2540_2343 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmoa.2307 lmoa:LMOATCC19117_2307 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmok.2216 lmok:CQ02_11640 pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_monocytogenes.1573 lmv.789 lmv:Y193_04265 pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471   lin.2160 lin:lin2346 similar to putative ribosomal large subunit pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471   lwe.2244 lwe:lwe2261 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471   lsg.2206 lsg:lse_2224 ribosomal large subunit pseudouridine synthase, RluD subfamily; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_ivanovii.2990 liv.2121 liv:LIV_2228 Putative ribosomal large subunit pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_ivanovii.2990 lii.2192 lii:JL52_11690 pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_ivanovii.2990 liw.2267 liw:AX25_11885 ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_ivanovii.1363 lia.2230 lia:JL58_11885 pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
OC.312574 Bacteria.262073 Firmicutes.5621 Firmicutes___Bacilli.20239 Listeria.471 Listeria_ivanovii.1363 lio.2317 lio:JL53_12375 pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

( plain text of OC.312574 [Listeria] ) ( previous ver. )

Refinement of cluster

OC depth

KOs in cluster

    K06180 (45) 23S rRNA pseudouridine1911/1915/1917 syn...

> Pathway search
> BRITE search

Organism selection


Distribution of taxonomic categories

sequence organism Listeria KO

Neighbor clusters

OC.312544 (1) OC.312545-312563 OC.312564-312567 OC.312568 (6) OC.312569 (19) OC.312570 (22) OC.312571 (1) OC.312572 (13) OC.312573 (1) OC.312574 (249) OC.312575 (1) OC.312576 (3) OC.312577 (59) OC.312578-312633 OC.312634 (3) OC.312635 (467) OC.312636 (46) OC.312637 (20) OC.312638 (113) OC.312475-312543 OC.312639-312663