ID or terms query

Escherichia_coli.1379 (26 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 eco.1168 eco:b1285 pdeR; cyclic di-GMP phosphodiesterase PdeR; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecj.1057 ecj:JW1278 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecd.1186 ecd:ECDH10B_1402 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ebw.1103 ebw:BWG_1117 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecok.1028 ecok:ECMDS42_1083 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 eoj.1754 eoj:ECO26_1852 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 eoh.1454 eoh:ECO103_1449 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecoo.1677 ecoo:ECRM13514_1705 yciR; RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecoh.1657 ecoh:ECRM13516_1672 yciR; RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 eso.2295 eso:O3O_11720 RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 esm.2716 esm:O3M_13885 RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 esl.2718 esl:O3K_13910 RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecw.1434 ecw:EcE24377A_1489 sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 elh.1380 elh:ETEC_1389 putative signal transduction protein; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 eun.677 eun:UMNK88_1618 RNase II stability modulator protein; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecy.1356 ecy:ECSE_1337 conserved hypothetical protein; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecr.1251 ecr:ECIAI1_1310 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 eck.1371 eck:EC55989_1447 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 eko.2500 eko:EKO11_2565 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ekf.3228 ekf:KO11_16390 gmr; RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 edh.2288 edh:EcDH1_2361 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 edj.1215 edj:ECDH1ME8569_1227 gmr; RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 elw.1447 elw:ECW_m1380 gmr; modulator of Rnase II stability; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ell.1350 ell:WFL_06725 gmr; RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecoa.2017 ecoa:APECO78_10300 RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
OC.2286 Bacteria.542336 Proteobacteria.303080 Gammaproteobacteria.122753 Gammaproteobacteria___Enterobacteria.11996 Escherichia.3688 Escherichia_coli.1379 ecol.1287 ecol:LY180_06540 RNase II stability modulator; K14051 c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]

( plain text of OC.2286 )

Refinement of cluster

OC depth

KOs in cluster

    K14051 (26) c-di-GMP phosphodiesterase Gmr [EC:3.1.4...

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Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.2284 (1) OC.2285 (1) OC.2286 (204) OC.2287 (86) OC.2288 (10) OC.2289 (1) OC.2290 (4) OC.2291 (1)