Sequence Similarity Search

BLAST Search

BLAST	FASTA	KEGG2

Enter query sequence:

Sequence data

>bsu:BSU17200 K13613 bacillaene polyketide synthase PksM/BaeM | (RefSeq) pksM; polyketide synthase PksM (A)
MITEQLHISLNNPIMSNHKVYGQALLPGLAYIDLIYQVFQEHGYAYQELELKNLTIFYPL
IADESYDIALTIHVSERKEGTWSIIIDGQKQHGESLSDKRQYVTADMHRKEQTAFAESID
LNQWKSTADRILNLDEIYEQCRSQELVHTGMMKAEGQIYEAKEGAVIDLAVGQEALRHSD
AFLFHPTLIDGSGIGSSCLISDQTMYLPLYYESFSASERLQKGCTARILSSSVRQKKELT
YMTIEYFNSAGQKVAELKQFAGKSVRNMSAFHSAKEIQEERAAVSQNISRDYPAFEMYLR
QLLAKQLERPAEQMDIHAGYYELGLDSSSLLTVVQEIGDKVGADLAPTLLFEFTTIAELA
AHLADHYSIGEADDAVRQSPSPIDGVTSSPEIGEDIAIIGMAGRYPKAKNIQEFWEQLKA
GTDCITEIPNSRWEWKESDGLDSPAGKPLSKWGGFIEEADCFDPQFFRISPREAEMMDPQ
ERLFLETCWEAIEDAGYTPETIASPQGENKRQHVGVFAGVMHKDYSLIGAEALSEHNPFP
LSLNYAQIANRVSYYCNFHGPSMAVDTVCSSSLTAVHLAIESIRNGECEAALAGGVNLSL
HPAKYISYGSVGMHSSDGYCHTFGKGGDGYVSGEGVGTVLLKPLRKAEQDGDRIYAVIKG
SAINHVGKVSGITVPSPVAQADVIEACLEKTGIDPRTISYVEAHGTGTSLGDPIEVQGLV
KAFSRNTQDKQFCSIGSVKSNIGHAEAAAGISGLTKTVLQLHHKTLVPSLHSEELNPYLK
LDQTPFFVQHETKEWEQPSFTENGVDVTYPRRAGLSSFGASGSNAHLILEEYIPAESHSE
TILTKNEEIVIPLSARNKDRLQAYALKLLDFLSEDVNLLALAYTMQAGRVEMEERAAFIV
KDIKDLTAKLRAFANGEEEIEGCWTGRAKENQEAAGLASVNALNNNLIRDSEMMEMAKAW
VQGKRVTWDDLYGDRKPLKISVPTYPFARERYWISVPEMKTSTVNHILHPLVHRNTSDFT
EQRFSSVFTGTEFFLSDHVVQGQKILPGVAYLEMAREAAEKAAGDLDGEQRVVSLKDIVW
VRPITIESEPKEIHIGLFPEDNGDISFDIYSSSEHKEEALTIHCQGRAVISDEAETSILN
LSSIQTECSLDTVTSEQCYAAFRKIGLDYGEGYQGIEKVYVGKDQLLAKISLPAFLKNDK
QHFALHPSLMDSAFHATVGFIVSSVNAAGQAQTLSLPFALQEVDIFSPCPEKIWSYIRYS
SDSKAENKVRKYDIDLCDENGRVCVRMKGASMRALDGEQHSKPQLLTDSQLTGHTVMIPV
WEPVSLEAEDNASFAGKRAVLCGAAEADRTFIKHHYPQISFVDIRPADDIEAIADKLQAY
GSIDHVLWIAPSHRGSIGSDGQEEAVLHLFKLVKACLQLGYGEKQLEWSLVTVQAQPVTQ
HEAVQPAHASIHGLAGTMAKEYPHWKIRLLDLEKGCTWPVNHMFALPADRLGHAWAYRNQ
QWHQQQLIPYRSSLSGDTLYRKGGVYVVIGGAGYIGEAWSEYMIRRYQAQIVWIGRSQLN
AAIQSKIDRLSALGPEPFYIAADAADKHSLQQAYEQVKKRHPHIHGIVHSAMVLFEQSLE
KMKPEEFTAGLAAKIDVSIRMAQVFRQENVDFVLFFSSLVAHIKNVKQSHYASGCTFADA
FAHQLSQSWACPVKVMNWGYWGNSEAAEDEHYVQLMNQIGLGLIEPAEAMKALEALLSGP
VSQTAFIHTTKPVAVEGVNQNEFITLYPEQPSADAESLMERLPTTGRFQRVTHEELDDLL
YRLLLGQLQTAELFDGYTLSVERLQQYKTREFYGKWIRQSSEFLLQHGYLKKVGDSLVRK
DQAEDIELLWLEWNAKKEKWLKDSETKAMVVLAEAMLQALPDILTGKVPATDIMFPHSSM
ELVEGIYKHNQVADYFNKVLADTLLAYLDERLKHDPEASIRIMEIGAGTGGTSAGIFEKL
KPYQKHINEYCYTDLSKAFLLHAEKEYGAENPYLTYQLFDVEKPIDQQEFEAGGYDVVIA
ANVLHATKNIRQTLRHTKAVMKNNGMLLLNEMAGNSLFPHITFGLLEGWWLYEDPAVRIP
GCPGLHPDSWKAALESEGFESVFFPAEAAHDLSHQIVAASSNGLVRRMMKNVILPEKVVS
QASNQEPAYIHTIDSEEAGQSKHALLREKSTEYMKKLIGETLKIPAGKIESSEPLEKYGI
DSIVVVQLTNTLRKEFDHVSSTLFFEYQTIDALVEHFIKTKTEALMKLTGLDRQVQQHTP
AESRTQSSQKPDQAAKRTRRFRKLGFSGEKETPTNTLASRDVAVIGISGRYPQAETAEDF
WNNLKEGRNCIEEIPKDRWDWKAYYDKEKGKEGSIYTKWGGFIKDMDKFDPLFFQISPLE
AERMDPQERLFLQTAYASIEDAGYTPDSLCSSRKIGVFAGVMNKNYPTGYGYWSIANRIS
YLLNFQGPSLAVDTACSSSLTAIHLALESIYSGSSDCAIAGGVNLVVDPVHYQNLSVMNM
LSASDTCKSFGDDADGFVDGEGVGAIVLKPLQQAIADGDHIYGVIKASAINSGGKTNGYT
VPNPHAQAQVIKEAIERADIPARTISYLEAHGTGTALGDPIEIAGLTKAFEKDTQEKQFC
AIGSSKSNIGHCESAAGIAGLTKILFQFKYGQIAPSLHAQRLNPNIEFSHTPFVVQQQLG
EWKRPVIGGQEVPRRAGLSSFGAGGSNAHIILEEYIPRTGAQTPKDHPPALIVLSAKNME
RLQEKAEQLLTAIKQKRYCETDLIRIAYTLQTGREAMEERLAFIAESLEDLERKLNDFIE
NKADSLYLDRIDDNKKALAVLSADEDTEKIIEAWMSKGKYTKLLDLWVKGLSFDWGMLYG
TQTPVRISLPAYPFAKERYWAPGAAKAPVSIEQDHDQQTEEPFKVMTFQEVWKEEPATLT
SKRIKTLICFLTEREKQNAFASALKNVDQDTKVIFISQGEVYSKQSEYSYQIVRQEPVTF
EKAFQSIKEELGEPDAILYMWPMEDKRCIKDHSCIVYLLQGMSAAKLHPSRLLLAGCFED
SLDRSYLESWIGFERSLGLVLPHTKVTGIFQPAEQGSMDDWTRKVWAELQASTEQTVLYQ
NLKRYVNHIEQTTIQPDNSKLKSGGTYLITGGVGGLGYLFAKHLAKNYAANLILTGRSPF
NDEKQKQIKELKDLGGEAMYAEADVSDPIAMGDCVKRGKDRFGAINGVIHAAGIESDSAI
FDKKIESFQRIIEPKINGTIALDEWLKNEDLDFMCYFSSSSAVLGDFGCCDYAIGNRFQM
AYAQYRNELHNGKTFVINWPVWKDGGMKIGDEETTDMYLKSSGQRFLEAEEGIRMFEHIL
AQQDAQHLVIAGQPSRVSRFLGMTEPAIPEPATQAPLAQENKDEVKTLSIEKRLEHDLKE
HIHTLLKISKDKLNLNKNWADFGFDSIYLAKFSNVLSKHFNIEVTPALFFGYSTLQELIS
FFLTDHKELIEAFYRDDASEAQKPPEAYAVIPVALEPEASKKSIRQVHDEPIAIIGMSGR
FPQADSVHELWDNLKNGKSCISDIPGERRDWGRANRDPEKAVPRWGAFLKDIDRFDPLFF
QISPKEAESMDPRQRIFLEEAWHTFEDAGYMGDRIKGKSCGVYVGVEEGEYAHLTGDTDY
INGTQNATLSARIAYALDLKGPNMALTAACSSGLVAIHQACSALRQGDCEMALAGGVSLN
ISHMSFEALTRAEMLSPNGQCKVFDQDANGLVPGEAVAAVLLKPLSKAIEDKDHIYGCIK
ASGVNYDGKTNGITAPNPFSQAELIENIYEKNEINPLDIQYVMAHSTGSNLGDPLEVQAL
TSVFSKYTKQKQFCMISSIKPLIGHTFAASGTVALISMLMAMKNQIIPATHHCESENPYI
PFKESPFVLCKENRSWIKKNQKPRMGTISTTGISGTNAHAVIEEYIPDDQPSTQRHQGSP
QIFVISAQNDDRLQDAACRMIAYLEQNHNLSLPDVAYTLQVGRKAMEARLAIVANNQEQL
VRKLKEYVEAMKNGGVSGQQRSLYTGYTEGILEEQDEAVLQALAKERNLENIAECWVKGY
QIPWELLHDGDDVRMVSLPGYPFARERYWISSGTQQSEAVKQHSQDMKTEIDEPNGKTHI
QKIIVQFLARELGISEDRINFKRNFLDYGMDSILGRKLMRHIEKTTQLKMAGREILECQT
VQALSDHLALKAEKQNHSAAAHHIKGTYTDEQIIGLMQEVALGKLDFKSVQNIIEGSKSY
ES

Select program and database:

BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

Microbial Reference Genes

Ocean (OM-RGC) Human gut (IGC)

nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot UniProt RefSeq
PDBSTR
UniRef50 UniRef90 UniRef100
Virus-Host DB

BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

KEGG GENOME

	Favorite organism code or category

Microbial Reference Genes

	Ocean (OM-RGC) Human gut (IGC)
	Ocean (MATOU)

nr-nt (GenBank, EMBL and RefSeq)
     dbEST dbGSS HTGs dbSTS
     RefSeq
Ribosomal Databases
     SILVA (SSU, 16S/18S) SILVA (LSU, 23S/28S)
     PR2 (Protist Reference)
     RDP (Prokaryotic 16S) RDP (Fungal 28S)
EPD
Virus-Host DB Genes
     Genomes
Environmental Viral Genome

Scoring matrix:

(except for BLASTN)

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Output options:

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Optional parameters: (see manual for details)

E-value threshold
Alignment view:	(except for BLASTX)
Additional options:	(delimited by whitespaces)

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