Sequence Similarity Search

BLAST Search

BLAST	FASTA	KEGG2

Enter query sequence:

Sequence data

>mtu:Rv0236c K16648 arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] | (RefSeq) aftD; alpha-(1->3)-arabinofuranosyltransferase (N)
gtggcgccgttgtctcgcaaatggctgccggtggtcggcgcggtagcgttggcgctgacg
ttcgcccaatcccccggacaagtctcccccgacaccaagctggacctcaccgccaacccg
ctgcgcttcctggcgcgtgcgaccaacctgtggaacagcgacctgccgttcgggcaggcg
cagaaccaggcctacgggtatctgtttccgcacggcaccttcttcgtgatcggtcacctg
ctgggagtgcccggctgggtcactcagcggctgtggtgggcggtgttgctcacggtcggc
ttctggggcctgctgcgggtagccgaggcgctgggcgtcggcggcccgtcctcgcgggtg
gtcggcgccgtggcgttcgcgctgtcaccacgggtgctgaccacactcgggtcgatctcg
tcggaaaccttgccgatgatgctggcgccgtgggtgctgctgcccacgatcctggcgctg
cgggggacttctggccgctcggtgcgcgcgctggccgcccaagccgggctggcggtggcg
ctgatgggcgcggtcaacgccatcgcgacgctggccggttgcctgccggcggtgatctgg
tgggcctgtcaccggccgaatcggttgtggtggcgctacaccgcgtggtggctgttggcg
atggccctggcgacactgtggtgggtaatggcgctgacgcagctgcacggggtcagtccg
ccgtttctggacttcatcgaatcttccggcgtgaccacgcaatggtcctcgctggtggag
gtgctgcgcggcaccgacagctggacgccgttcgtggcgccgaacgcgaccgcgggcgcg
ccgttggtcaccggatcggcggccatcctgggcacctgcctggtcgcagcggccgggctg
gccggactgactagcccggcgatgccggcgcgcggccggctggtgacgatgctgttggtc
ggggtggtgctgctggccgttggccaccgcggcgggctggcttcgccggtcgcccacccg
gtgcaggcgttcctggacgccgccggcacccccctgcgcaacgtacacaaggtggggcct
gtgatccggctgcccctggtgctgggcttggcgcagctgctgagccgagttccgctgcca
ggcagcgcgccgaggccggcgtggctgcgcgcgttcgcgcaccccgagcgggacaagcga
gtagcggtggcggtggtagccctgaccgcgctgatggtcagcacctcgctggcgtggacc
ggccgggtcgccccgcccggcacgttcggtgcgcttccccagtactggcaggaggccgcc
gactggctgcgcacacaccatgccgcgacgcccactcccgggcgggtgctggtggtcccg
ggcgccccgttcgccacccaggtgtggggcaccagccacgacgagccgctgcaggtgctc
ggcgacggcccgtggggcgtgcgcgactccattccgctgaccccgccgcagaccattcga
gcgctggactccgtgcaacgcctgttcgccgccggacgaccgtcggcggggctggccgat
acccttgcccgccaaggcatttcctatgtgctggtacgcaacgatctggatcccgagacg
tcgcgctcggcacgaccgattctgctgcaccgtagcatcgcagggtcgcccgggctagcg
aagctggcggagttcggcgcgccggtgggtcctgatccgctggcgggtttcgtcaacgac
agcggcctgcgaccccgatatcccgcgattgagatctaccgggtgagcgcgcccgccaac
cccggtgcgccctacttcgccgcgaccgaccagctcgcccgcgtcgacggcggacccgag
gtcctgctgcgtctggacgaacgacgccggctgcagggccagcccccgctgggtccggtg
ctgatgaccgcggacgctcgagctgccggcttgccggtgccccaggtcgccgtcaccgac
accccggtggcccgcgagaccgattacggccgggtggaccaccactcgtcggcgatccgg
gcacccggcgacgcccggcacacctacaaccgggtgcctgactacccggtgccgggcgcg
gagccggtcgtcggtggatggaccggcggccggatcaccgtgtcgagctcctcggcggat
gccaccgccatgcccgacgtcgccccggcgagcgcacccgcggccgccgtcgacggtgac
ccggcgaccgcttgggtgtccaacgcgctgcaggccgccgttgggcagtggctgcaggtg
gatttcgaccgtccggtgaccaatgccgtcgtcaccctgacacccagcgcgaccgcggtc
ggcgcccaggtccgacgcatcctgatcgagaccgtcaacggcagcaccaccctgcggttc
gatgaggcgggcaaaccgctcaccgccgcactgccctacggcgaaaccccctgggtgcgg
tttaccgcggccgccaccgacgacgggtcggccggtgtgcagttcggcatcaccgatctg
gccatcacccaatacgatgcgtccggtttcgcccatccggttcagctgcgacacaccgtg
ctggtgcccgggccgccgccgggttcggcgatcgcgggctgggacctgggatccgaactg
ctgggcagaccgggctgcgccccgggacccgacggcgtgcgctgcgccgcctcgatggcc
ctggcacccgaggaaccggccaatctcagccgcacactgaccgtaccccgcccggtgtcg
gtgaccccgatggtgtgggtgcgaccacggcagggcccgaagctggccgacttgatcgcc
gcgccttccaccacccgggccagcggtgattccgaccttgtcgacatcctcggctcggcg
tacgcggccgccgacggcgatccggccaccgcctggaccgcgccgcagcgggtggtgcaa
cacaaaaccccgccgacgctgacgctgaccctgccgcggcccaccgtggtgaccgggctg
cggctggccgccagccggtcgatgttgccggcccatccgacggtggtggccatcaacctg
ggcgacggcccccaggtccgacaactgcaggtcggcgagctaacgacgctatggctgcat
ccccgggtgaccgacacggtgtcggtcagcctgctggactgggacgatgtcatcgatcgc
aacgcgctgggcttcgaccagctcaagccgccggggctggccgaagtggtggtgcttagc
gccggcggcgccccgattgcgccggccgacgccgcccgcaaccgcgcgcgtgcgctcacc
gtggattgcgatcacggcccggtcgtcgccgtcgcgggccggttcgtgcacacctcgatc
cgaaccacggtgggcgccttgctggacggtgaaccggtcgccgcgctcccgtgtgaacgc
gagccgatagcgctgccggcgggacagcaggaattgctgatcagccccggcgccgcgttc
gtggtcgacggtgcccagttgtcaactcccggtgctggattgtcaagcgcgacagttact
tctgctgaaacgggtgcgtggggtcccacccaccgcgaagttcgggttcccgagtcggcc
acttcccgggtgctggtggtacccgaaagcatcaactcgggctgggtggcccgcacgagc
accggggcccggctgacaccgatcgccgtcaacgggtggcagcaggcctgggtggtgccc
gccgggaaccccggcaccatcacgctgacattcgcaccgaactcgctgtatcgggcgagc
ctggcgatagggctggccctgctgcccctgctagctctgctggcgttctggcggaccggg
cgacggcagctcgccgaccggcccacaccaccctggaggcccggagcctgggcggcggcc
ggggtgctggcggccggggcggtgatcgccagcatcgccggggtcatggtgatgggcacg
gccctcggtgtgcggtatgcactgcgccgccgggagcgactacgtgaccgggtcaccgtc
ggactggctgcgggcgggctgatcctggccggcgctgcgctgtcccggcatccgtggcgg
tcggtcgacggatacgccgggaactgggccagtgtgcaactgctggcactgatttcggtt
tccgtggtggcggcatcggtggtcgccacatcagagtctcgtggtcaagaccgcatgcaa
tag

Select program and database:

BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

Microbial Reference Genes

Ocean (OM-RGC) Human gut (IGC)

nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot UniProt RefSeq
PDBSTR
UniRef50 UniRef90 UniRef100
Virus-Host DB

BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

KEGG GENOME

	Favorite organism code or category

Microbial Reference Genes

	Ocean (OM-RGC) Human gut (IGC)
	Ocean (MATOU)

nr-nt (GenBank, EMBL and RefSeq)
     dbEST dbGSS HTGs dbSTS
     RefSeq
Ribosomal Databases
     SILVA (SSU, 16S/18S) SILVA (LSU, 23S/28S)
     PR2 (Protist Reference)
     RDP (Prokaryotic 16S) RDP (Fungal 28S)
EPD
Virus-Host DB Genes
     Genomes
Environmental Viral Genome

Scoring matrix:

(except for BLASTN)

Filter:

Output options:

Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:

Optional parameters: (see manual for details)

E-value threshold
Alignment view:	(except for BLASTX)
Additional options:	(delimited by whitespaces)

Feedback	KEGG	GenomeNet	Kyoto University Bioinformatics Center