BLAST Search
BLAST
FASTA
KEGG2
Enter query sequence:
Sequence data
>NC_071116 (refseq) complement(join(483582..483677,485227..485278, /translatio MAEGGEGEEEIQFVRTEDQVVLQCTATILKEQFKLCLSCEGFGNRLCFLETTSNAQNVPP DLAICVFILEQSLSVRALQEMLSHTSEDVDLDKWVYNSDFFSYSKSSQGGGHRTLLYGHA ILLRHTHSGMYLSCLTTSRSLTDKLAFDVGLQEDSTGEACWWTIHPASKQRSEGEKVRVG DDLILVSVSSERYLHLSYASGDLMVDASFMQTLWNMNPVSSGCELVEGFLTGGYVLRLFH GHMDECLAIPAADPGEERKNAHYEGGAVCSHARSLWRLEPLRIGWSGGHIKWGQPFRVRH ITTGRYLCLDDEKGLLVVDPEKANTKSSAFCFRASKEKTEVAQKRDVEGMGAPEIKYGES MCFVQHVATSLWLTYASVDAKSARLGPVKRKAILHQEGHMDDALTVARSQTEESQAARMI YSTAGLFAQFIKSLDSLNGKNKSSAPAPSSLPLESVVLSLQDLIFYFRPPEDELEHEEKQ SKLRSLKNRQNLFQEEGMITLVLDCIDRLNVYNTAAHFSEFAGEEAAESWREIVNLLYEL LASLIRGNRANCALFCDNLDWLVSKLDRLEASSGILEVLYCILIESPEVLNIIQENHIKS IIALLDKHGRNHKVLDVLCSLCVCNGVAVRSNQNLITENLLPRRDLLLQTQIINYVTSMR PNIFLGTCEGSTQYKKWYYELIVDDVEPFLTAQAGHLRVGWALTEGYSPYPGGGEGWGGN GVGDDLYSYGFDGLYLWSGRVPRHVASSNQHILAAEDVVSCCLDLSVPSISFRINGHPVQ GMFENFNLDGLFFPVVSFSAGIKVRFLLGGRQGDFKFVPPPGYAPCYEAVLPKDRLRIEP IKEYKNDLSNDVRNLLGPTQSLSHTAFTPNPVDTVQIVLPPHLERIREKLAENSHELWAV TRIEQGWTYGPFRDDNKKLHPCLVDFQSLPEPERNYNLAMSGETLKTLLALGCHVGMGDE KAEENLKKIKLPKTYTQSNGYKPAPLDLNHVKLTPNQNTLVERLAENGHNVWARDRVRQG WTYSIVQDIVNKRNPRLVPYNLLDEKTKKTNRDTVCAAVRTLIGYGYNIEPPDQESSGHV SNGSGNKIRVFRAEKSYAVTQGKWYFEFEAVTVGEMRVGWARPNVHADKELGADELAYAF NGCKAQRWHVGSEPFGRQWQPGDVVGCMIDLTEQNIMFTLNGEMLISDSGSEMAFKDIEI GEGFIPVCSLGLSQVGRINLGQNVSSLRYFTICGLQEGFEPFAINMKRDITMWFSKSLPQ FIPVSPDHPHIEVSRVDGTVDSAPCLKLNHRTFGSQNANTDLLFFRLSLPIEFHESFKVE AGATPLTRALTIPEDEALEVDPNSEYELLKKSATRREQEEKDKEASVPKEPPGTKEAENE KDTTTEKSKKRGFFSKAKKAAFITPPPVVPAVPRLVEDVVPDDRDDVDIISNTTTHYYSV RVFAGQEPSGVWAGWVTPDYHQYDPHFDISKVRNVTVTVGDDKGNIHHSMKRSNCYMVWG GEFSGSQQTRITQEDFVIGCLLDLATGLMTFTANGKEVNTFYQVEPNTKLFPAVFCLPSS QNMLQVELGKLKNIMPISAAMFRSDRKNPVPQCPPRLDVQMLTPVIWSRMPNRFLSPETS RVSERLGWMVQCTEPLIMMALHIPEENRCIDILELSECTDLLKFHHHTLKLYGSVCALGN NRVSHALCSHVDESQLFYAIENSYLPGPIRSGYYDLLISMHLESAKRNRLMTNQEFIVPM TDETRSITLTAHTLPAVGRSTCLRPTLQFSHTGFVGTNADLYTLSPHVPLQILKDHALSM LTEAVLDGGQAMRDPVGGSVEFHFVPILKLISTLLIMGVFEDEDVKHILKLIEPTVFRED REELEEEEEEGEEEEDQTEQEDEEEHTAPEKADREKAEHRGAEPKAEPEAGVTAMREEPK EEEEVGEGLLHMKLPESVKLQMCTLLQYFCDCELRHRVEAIVAFSDRFVTQVQSNQKLRY NDLMQAFTMTAAETARKTREFRSPPQEQVNMLMSFKNCPDEEDSPVPEKVRFDLQMFHND LLAHCGIHVEEEEEEEHVDTSLRGRFFRLLEKVKRLRKRKQDTEMKPEEEKKPSTLQELI SHTMIHWAQESFIQDPELVRLMFSLLHRQYDALGELIRALPKAYTINAVSMQDTMELLEC LSQIRSLLIVQMGPEEERLMIQSIGNIMSNRVFYQHPNLMRALGMHETVMEVMVNVLGGG DSKEIRFPRMVTNCCRFLCYFCRISRQNQRSMFDHLSYLLQNSGIGLGMRGSTPLDVAAA SCIDNNELALALQEQDLEKVVKYLAGCGLQSCPMLLSKGYPDIGWNPCGGEKYLDFLRFA VFVNGESVEENANVVVRLLIRRPECFGPALRGEGGNGLLAAIEEAIKISEDPARDGSTVK KDRRFPMFGGEEQHEESRVHLGNAIMSFYAALIDLLGRCAPEMHLIQAGKGEALRIRAIL RSLVPIEDLVGVISLSLQIPAFGKDNSIIEPKMSASFVPDHKAPMVLFLDRVYGIDNQDF LLHVLEVGFLPDMRAAASLDTAAFSTTEMALALNRYLCSAVLPLITKCAPLFAGTDHRAI MIDSMLHTIYRLSRGRSLTKAQRDVIEECLMSLCKYLRPSMLQHLLRRLVFDVPILNAYA KMPLKLLTNHYERCWKYYCLPNGWANFGVSSEEELHLTRKLFWGIFESLAHKKFDAELFK IAMPCICAIAGAIPPDYVDASYSSKTEKKASVDAEGNFDPKPVDTTNTIIPEKLDGFINR YAEYTHDKWAFEKIQNNWTFGEVLDEIAKTHPMLRPYKTFSEKDKEIYRWPIKESIKAMI AWEWTLDKARDGDEDKGEKKAARKISQTAQATYDPSHGYNPQPINVSGMTLSRELQSMAE QLAENYHNTWGRKKKVELQAKGGGTHPLLVPYDTLTAKEKARDREKAYELLRFLQLNGYA VTRGLKDMESDISSIEKRFAYGFLQKLLKWMDIAQEFIAHLEAVVSSGRVEKSPHEQEIK FFAKILMPLINQYFKNHCLYFLSTPAKILGSGGHASNKEKEMIASIFCKMSALVRHRVFL FGTDAPAIVNCLHILARSLDARTVMKSGPEIVKAGLRSFFESAADDIEKMVENLKLGKVS KGNQPVKGVSQNINYTTVALLPVLTSLFDHIAQHQFGDDVILDDLQMSCYRIMCSIYSLG TVKTPHAERHRPALGECLAHLAAAMPVAFLEPHLNEYNAFSVYTTKTPRERAILGLPNEV QELCLDIPELEVLMREISHLAESGARYTEMPHVIEVTLPMLCNYLPRWWERGVENHPELE GKLCTHVTSEQLNQLLGSIMKIVVNNLGIDEAPWMKRLAVFSQPIVSRAKPEMLKSHFIP TMEKLKKRTAKVVAEEEHLRMEGKMEGDKEEGTIRDEFAVLCRDLYALYPLLIRYVDNNR ARWLTCPDPDAEELFRMVGEVFIFWSKSHNFKREEQNFVVTNEINNMSFLTADSKSKMSK AGGSDVERTKKKRRGDRYSVQTSLIVAALKKMLPIGLNMCSPADHELINLAKFRYSLRDT NEEVREFLQGNLHLQGKVENPSMRWQMALYKMMAGKAEDADAPEKVVKRVQEVAAVLYHI EVTEHPYKSKKMVWHKLLSKQRRRAVVACFRMTPLYNLPSHRASNMFLDGYKRNWLHTEG LSFEDRMIDDLSKAMEEEEEEEEEKETKPDPLHQLILHFSRTALTEKSKLDMDYLYMAYA DIMAKSCHIGEEDEGGDEDQEGDQEEMSFEEKEMEKQRLLYQQSRLHNRGAAEMVLQMIS ACKGETGCMVSSTLKLGISILNGGNTDVQQKMLDYLKDKKDVGFFLSLQTLMQTCCVLDL NAFERQNKAEGLGMVSEEGTNMKLERGEKVMADDEFTCDLFRFLQLLCEGHNNDFQNYLR TQTGSTTTINIIICTVDYLLRLQESISDFYWYYSGKEIIDEPGKRNFSKAMTVAKQVFNT LTEYIQGPCTGNQQSLAHSRLWDAVVGFLHVFAHMMMKLAQDSSQIGLLKELLDLQKDMV VMLLSLLEGNIVNGTIARQMVDMLVESSSNVEMILKFFDMFLKLKDIVVSGAFRDYVTDP RGLISKKDFQKAMDSQKQYTPSEIQFLLSCSEADENEMINYEEYSSRFQEPAKDIGFNIA VLLTNLSEHVPHDTRLQNFLEQAESVLNYFRPFLGRIEIMGANRKIERIYFEISEVNRKQ WEMPQVRESKRQFIFDVVNEGGESEKMELFVNFCEDTIFEMNIASQISEQEEEEKGDDEE IDEGNEGGGGGADDEDGKKNSQSESSSAFADFLTSVVHFLGMFTFRNLRRQYRRLRKMTV KEIVFGIATFIWTILLGVLHFIFSVCKGFFLIVWHTLFGGSLVEGAKNITVTELLASMPD PTQDEVHGDLPGEAGSGEEQEAGGVTDSTEAAQGEEEDEDSTEQDVGKIPGIDTPGGLGD MGDTTPVDPPTPEGSPLTKRKMQPEEGGTEQAAAPEEPAPEPEKADTENVEKTEKEAEQK TEEPQENVKVQKPSKAKKEKKTTRDSGFELWNELDVQRNKFMNYLSRNFYNLRFLALFIA FALNFILLFYRVSDTPPGDEEHEGSGLFDGSGLFEGSDGQMDGSGAKDVGGDDDDDEEGP VYYFLEESTGYMQPTLSFLAIIHTIISFICIIGYNCLKIPLVIFKREKELARKLEFDGLY ITDQPEDDDIKGQWDRLVINTPSYPNNYWDKFVKRKVLDKYGDIYGRERIAELLGMDLAS LDVSKQQTDKKPKEPDNSMLAWIAATDIKYQIWKFGVVFTDNTFLYLVWYTVMSLLGHYN NFFFACHLLDIAMGVKTLRTILSSVTHNGKQLMMTVGLLAVVVYLYTVVAFNFFRKFYNK SEDEDEPDMKCDDMMTCYLFHMYVGVRAGGGIGDEIEDPAGDEYELYRVVFDITFFFFVI VILLAIIQGLIIDAFGELRDQQEQVKEDMETKCFICGIGSDYFDATPHGFETHTLEEHNL ANYLFFLMYLINKEETEHTGQESYVWKMYQERCWDFFPAGDCFRKQYEDQLG
Select program and database:
BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot
UniProt
RefSeq
PDBSTR
UniRef50
UniRef90
UniRef100
Virus-Host DB
Environmental Viral Genome (predicted proteins)
All
Aylward_2021 (PMID:34705818)
Gaia_2023 (PMID:37076623)
Backstrom_2019 (PMID:30837339)
Buscaglia_2024 (PMID:39178288)
Fang_2024 (doi:10.1101_2024.07.08.602415)
Liang_2024 (PMID:39039586)
Minch_2024 (doi:10.1101_2024.07.26.605358)
Monir_2020 (PMID:32249765)
Piedade_2024 (PMID:39448562)
Zhang_2024 (PMID:39312489)
Schulz_2020 (PMID:31968354)
Zayed_2022 (PMCID:PMC10990476)
Hou_2024 (PMID:39389057)
Roux_2016 (PMID:27654921)
Gregory_2019 (PMID:31031001)
IMGVR_2022 (PMCID:PMC9825611)
IMGVR_2023 (PMCID:PMC10767988)
Camarillo-Guerrero_2021 (PMCID:PMC7895897)
Gregory_2020 (PMCID:PMC7443397)
Sheam_2025 (PMCID:PMC12192438)
Graham_2024 (PMCID:PMC11222151)
Ma_2024 (PMID:38383853)
Wu_2024 (PMCID:PMC11310336)
Medvedeva_2026 (PMID:41315738)
Yutin_2024 (PMCID:PMC11253617)
Gaia_2025 (doi:10.1101_2024.03.23.586382)
BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
KEGG GENOME
Favorite
organism code or category
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
Ocean (MATOU)
nr-nt (GenBank, EMBL and RefSeq)
dbEST
dbGSS
HTGs
dbSTS
RefSeq
Ribosomal Databases
SILVA (SSU, 16S/18S)
SILVA (LSU, 23S/28S)
PR2 (Protist Reference)
RDP (Prokaryotic 16S)
RDP (Fungal 28S)
EPD
Virus-Host DB Genes
Genomes
Environmental Viral Genome
All
Aylward_2021 (PMID:34705818)
Gaia_2023 (PMID:37076623)
Backstrom_2019 (PMID:30837339)
Buscaglia_2024 (PMID:39178288)
Fang_2024 (doi:10.1101_2024.07.08.602415)
Liang_2024 (PMID:39039586)
Minch_2024 (doi:10.1101_2024.07.26.605358)
Monir_2020 (PMID:32249765)
Piedade_2024 (PMID:39448562)
Zhang_2024 (PMID:39312489)
Schulz_2020 (PMID:31968354)
Zayed_2022 (PMCID:PMC10990476)
Hou_2024 (PMID:39389057)
Roux_2016 (PMID:27654921)
Gregory_2019 (PMID:31031001)
IMGVR_2022 (PMCID:PMC9825611)
IMGVR_2023 (PMCID:PMC10767988)
Camarillo-Guerrero_2021 (PMCID:PMC7895897)
Gregory_2020 (PMCID:PMC7443397)
Sheam_2025 (PMCID:PMC12192438)
Graham_2024 (PMCID:PMC11222151)
Ma_2024 (PMID:38383853)
Wu_2024 (PMCID:PMC11310336)
Medvedeva_2026 (PMID:41315738)
Yutin_2024 (PMCID:PMC11253617)
Gaia_2025 (doi:10.1101_2024.03.23.586382)
Environmental Viral Genome (predicted CDS)
All
Aylward_2021 (PMID:34705818)
Gaia_2023 (PMID:37076623)
Backstrom_2019 (PMID:30837339)
Buscaglia_2024 (PMID:39178288)
Fang_2024 (doi:10.1101_2024.07.08.602415)
Liang_2024 (PMID:39039586)
Minch_2024 (doi:10.1101_2024.07.26.605358)
Monir_2020 (PMID:32249765)
Piedade_2024 (PMID:39448562)
Zhang_2024 (PMID:39312489)
Schulz_2020 (PMID:31968354)
Zayed_2022 (PMCID:PMC10990476)
Hou_2024 (PMID:39389057)
Roux_2016 (PMID:27654921)
Gregory_2019 (PMID:31031001)
IMGVR_2022 (PMCID:PMC9825611)
IMGVR_2023 (PMCID:PMC10767988)
Camarillo-Guerrero_2021 (PMCID:PMC7895897)
Gregory_2020 (PMCID:PMC7443397)
Sheam_2025 (PMCID:PMC12192438)
Graham_2024 (PMCID:PMC11222151)
Ma_2024 (PMID:38383853)
Wu_2024 (PMCID:PMC11310336)
Medvedeva_2026 (PMID:41315738)
Yutin_2024 (PMCID:PMC11253617)
Gaia_2025 (doi:10.1101_2024.03.23.586382)
Scoring matrix:
BLOSUM62
BLOSUM80
PAM30
PAM70
PAM250
(except for BLASTN)
Filter:
None
DUST in BLASTN, SEG in others
Output options:
Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:
Optional parameters:
(see
manual
for details)
E-value threshold
Alignment view:
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
Get ASN.1 for SeqAnnot
Get ASN.1 for the Blast Object
(except for BLASTX)
Additional options:
(delimited by whitespaces)
Feedback
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GenomeNet
Kyoto University Bioinformatics Center
