BLAST Search
BLAST
FASTA
KEGG2
Enter query sequence:
Sequence data
>NC_007287 (refseq) complement(528483..545312) /translation= MLEGHVAELLAMHLSRFIKDVNANQLRISLWSGNVVLHNVELRSDALERIAALLHGERSG VETTDAGASASGAAGAPSRSSKSHEGSLSTSTLSMRMLLAPFTVVKGVIRQLSITVPWAS LESEPVQVDVTGVELVLGPLRARPFNAKEEQEREQAIKQQQLERYEKERHRLSCEVAAET VSESTSKMTASTESGHVKRGHGSAVAGTNRASGASWFSWLWDFDRLSQIAVRNVRVNLQD VSMRCEFDYEGLHPSCASAFCVFVKQVQLTTTDEKFKDVFNKNLLTPLCKRIALSEVVVS AHAIRQSPRGASCSAREGRNNAVPSAVGEPASCAASYDTYASRWALSTAILRVHTLQLQV KLVPPECVSRNAIVEEMPMLSASSTELTVMTADSIEVDVCFGAVQVLESMWRSYQQSLPC ARYRKRLHMLRLTGRHATHTRALRQASEPNSASLPQDAATAWRSLAQQRWRFAIRCVLDD VRQHRQIFGLHEWKRCEVVEAMVQFGKLRRAYTAYWKRAKGVMWAPPLSALEEKRLKSME RQLSLWQVVFLRCFSRAQLVLEQESYARQQDYIEEARQRIKSGLLSSSGTGRGGTPTSFL WDWFFGRSARKNDTATLSRKSLASVAGCDGMGVISVPTYRGLCFRDLVALEWDLGRRYAP PHYARLAQPRAPQNRLPKLAAENKLYFTLRALFPKLILRLDPIYWPLTHDSSVPATPSAT PLQRVEQRLVVQLRAMELFYTTIPDDRPEKTSLSFFLGAASLTFEGALRSVLLQSKEQFG EDYVVVKRNAQRTHIHVWVAPQLVICQLTHEWAWWYAEVSAFVQWFRAVQQAFYVSGVPE ASPGAMPALAEGAQSDLHGAASAGSRTSASSSSTSTPRGQSAHTTTETTVPGASPVPRVL NVTIQSLDVCVPLFARDIESSDLEIFSRQPSAFSSAALPGSLPGTMPCDSTWKCGESQGQ LSTETASGDGDAGDGRPHDEAILQSGDAAPAALWLHTTDSIQSFPVDGDTDGAEYTESLC SSPSAGSGTFARVAPERCFLKNETCLVLSVSTTRLWTVAPPAKRYKGTENEYYLCIGDQS KAVRVFCQNGYNTHTHTTSRQLELLSFVAGEVRLNPKELTVLLNKGIDAVADPWVFALVN DALLKPTALAAADAHGQAVRALMAELRQAEYRWSGTRGAAVPWRLATSTCVELQVDSESP PVLREVPLDYARHILSALSAPLSIAASLATTVVHAISRGELATGVFGGRVCTVGVGVARL LIRSEANVDLGELVLVAPEHLPPATAPYREALSALGAEEPRAIELICNFADSQWHAVEQS SYDPLPLCPAREKVCPRLLLSIPDITMTTTAGRKLLTIEHLTLVQTCTAPTKPEAALTIQ TVSAFCDVVLVELLEVLIGTVCTMRSIKPPPQAAAYVVTGASRSDSAASEMPQSRFFGVL PIRVRVHTARFQTPLSRDDVVDAPYVEVTITIDDALCTLEPLTGGTGRGGKHVHLRFSVS EAMQLADYIGGEPEVRSLLSAYPWAACTGDGTAHALQCVADVTLPGSCVGDTDTSTSPRP GVPPSTTCRVELVGGAIHVYCPFLYFYAAAMKADERIVRLGELARSLLLRHGYTRAACFA DGTRRSRVVGGAWASREAALPLSLSVEATISDLDVVLATDAAVPIDMTKPNTFCVVHVEQ IVCGLQQTTSGSPGASATLETQTHASVDTNRVQLLDLLTARSRDVCLPDVKLRANRGVLL VPKEDLTGYTYQRGAPDDWAFLVGVHPASARSPQRAASVREAASSTASRPSDVTIHMSAQ QCRSLVCFFSHNVARLPIRSTRRTPRVGGGHLQHASTAPATVTFPMGGSNPLSSSRHGAE APSHQQAALSPSVTLLLTIPAVSILIDTDDYAAPDRSARQSTMPRSTKEDEGEFIAPAAP PTRLPSTRRVSYEVGLRRGGQLYSAVGECWSTSPVKNGQLSGVELVVREEMLENSTGGAD VTETTSTHVLLTIDLVGLALLERRAGRASREVDGDARNDAAVVKVAATVRHAHFRVPHIK WWLLLCSIFSGVCSAEGGRQSTAARTPGKSGSASTIARFGEAGQNGNEGASRLGSSAFGD HRGTSRGEYMDGNKAVWPTPQEHLASRQRRSRRLHGTVEITHTEVSFCTIGCANGDQQPL CRFTVPEARLTASPLPALQEGGRAHLNNAEYLYDEFVLEVPCCPELLLLCVSGEADGAAG LESQLSSGSSYASVLRRRPAEASSTASAAPVVKGSFWRQAAAAAVAPASKSPLLSAHSSE ACISLGLVSFSDAGSLRSLRYGRCYQVTDLTLHRTSVVQVRVQRMLLDIPVVPLFSLARE VVRQVMETQSIEGMRPHARAAPPDGRDAESPALTYIDMEAELTDVEVRLSAEATPLGEPA ASCDAGRDPVSWSVAVSSARLTTSVQLQSVLTSTRVPALLVGDGLSRGWRVQIWHMIPQL VVQDVVFSTNSDTQAWWRLSDVRIKASLPLTRRIICVRGKGAGGMVDELELSSSAEQLAL RWRHGSTANGFQMEPTAVTALNGLHYHVLASLHVDVGVESDGAVGTAPGHQAASVQVRLS TIFALASAAARLVALWRQTRHTCESSVAAAVNAGTTSRPAGWWRPDARQRHGLITWYEFE LGLSGRRVELIMDTAAATVSDKAASALTRDCVLCVSVDGAVTVQVDRGAGEEAVKRTTVS DIAQRDAGSDETMAECDGRVDDESAVAVALHTLFRLRTAPVHVHDRAGNLLLHVSAVPQG GMADAMVADYASAAARLDIDAGRVVIHASSLTAAAVVCWWKAYRALKRRWESAVTCMRQS SACPPEATRKSELSMGSERVCRWCWLQQINAEVRHIELVLAPAARVCAQRARITFSPTDV GIALDAAAALELRCEEVCVYSMLPQSRAAHETTPIVLARTVSPVLVITRAPKQRPLVQYR TPLVSIMNGDGHSWALCAFRIAKVVTGTVTALAARAEVTSLHTLESDPPTDGAAPSWVAW IPRAEVEIHRAELRCFAPHSKRTCSAASVVCLAARRAVFRCVESASQMDSSSVGTLVGIR MESSAVLSATYSSGLSTDVKAHPLLDDVTTTFALSSSSQSASDPVEVTFSAAAATEQNAV CLRVLAGDALEKTVAALWLLARQKLPRRYAQARAAKDSAAAGDKVRRGSGTLWHVRAAVP RVLLRCVVSSAAVSSSAQTLRHLCSISVDDVRVELYTRRGGSEGGDRQPHAEVWVGSVVG ETVVTDAAEELEERVMEMPWTFLELRPLVEPSGDRAPGTAPVTGGATRTRSNDRAGFSVV QRSLSLSTGGEEHDSAAQDIAADDATALVIRLHALHAHPSMTLLKTLMERVLRPFVTGIS AASADASLTHILDDLEDTVLRVESATAVLPASGALSRHAGRVRVVEVATDWHLDEDLRLG GEGGFQLHFCGTAGRSVITVRGGGAGGAGGEKLQGSAVTIFLCLPVGANGEVCPAIRVDP DLTVRFENVRVVVGEKAHAVRQDACVLEAYVELGERSLCLLPPPLVGVSASPSTVATDAQ VEEAAARVSQANSGAAASDTAVPQVPTTSLWAVSTIFSVNVAVGFDVSLTAGARRLAATG AVKGRYRFEEKRNPERTLRSEHEGECTIVLHTCVSESGPLTDTPVAATAQMCLAAAENQH LVVLDCGSTRWRLPLGHAHVLIELGRLAQQALCQTPFPSPPQRPWQPPAAGDALAHGPTR HATRLDVRANVPSWALTLTSDAGSALAILLVEHAGLQCCTDMDVADVVLTAEATVSLRDS IELDDESGEDQGATLRYAAERSSVASAMAARVLFSAQPHLSLSLTRFSPGCRSLSVSVHV DSVVATLPLVTAARLLRTSAREMDAGKLVFCNDSGVEMEVAESAQHAGAPLRSVSRWRLL AAPGRLLHTNIPPSCAVLMLTPVTAPVSDVSSTAGRKDGEGSGGVAVNLQALADGAVGRV SLPGYTSALGALDLVVRKSVRDRLEVVHLTSSVVLANVFYAVPADGSAAAPAAAGIVSVT AHGARLTVPPRSARYVPLPLLRECLTVELDGGAYAPVAKMLTWAMMADAMTLLADQAAGG GGETSGGSGNGGSASRKSGTAAGFMLYGNLDAQGRDRADNDNGYGGTLRAPAFCERVRAL DAFTLSFPMLLSPLTPAPMKPLCGDGAGDGDNDATFASAPARQSEAAVSSTENTARTGRV VQLTWRRRCSRLVAPLFSGRLSPSEYTVAVGPVWTLWNWTGCRLRLRLRTSRDGVVSSPV KAPQGTLSPPSSLLTSRSSDAVATAEVENGACFQWTPTTLDALQGTVFAFFQLMAPSLAG GSTTLPKSPSSTQWWSVAAPISLQERPPLYIRLQQGSNTTRGAVRIEQHGPSSVVVRCAA LLRSALARPVYLRDAEQSQPLLGAGAHGCVLPRQQVPLFYSEYVTTLAPHADLVGFTVVT NPVTGTGARNASLQESNAYYLKTPVVATLLSAQELAHCTRFYTVSAVSDAQFERPAATLH GKNDKDLGEQCVPAEALACLWTPEPPTVVQLSSLCRIRNTHVHRTLLAMPFDASAPSNAE GARPAPSMVTLIPPGEEREVTEFCRHAKEPEMQFCYSTIGGKAPAHAWSPPVRLLSLATA TQPLVLKHTCVPRDLQGVKSDAAAEEPRFIMNPVRRRVGETVALAVEHFRCLTVLSTMTS VSLCVSVGLQAAPPLKIVNRLNTTLQFAQCAVTTGSDLASSPARRGAVTTALCSCAPRPC SYVVAAGTMSCGCWEVPVLELPGLRVTLYSNVRQGFTVSQDVDLLRCAASPSSGARVGNT DAYVYVSLDHRRRQYTVTVAPSRQLEGRMLFQPRRLTQLEVYVHSCTVYVAAMTLPRAGP FARKSLIAQAARGRLRLRRGARSGESVNRDTVPLIATDEDVLTFLEGHELDVVLLRLLGF YGSATLTERHLMGSASLALLEVVDCTTVEAAYPVILRVGPRAGSGSATTMASNATVVPDA EAEQGHVSSPILPDVFGGAATLTSSTSVPHFKDPSWFALEVQLTRPGQAAGVDGVVMLPV PRLRVTVPPIVVRADDDLLFTLRATAERLGEEWASAAPSEQGGHAAERRGSLFSTPGAAA ADSTTHSSHRACNVFVYALQVSPIVAEVTYTRSGHWRYNPFQGLAQIPEQLIPSVEDLSI SLKEVRLQEVELRWSHSLFGIAKSFLWPLYRTQLLLQSYKVLGSLDVLGNPRALLGSWSR GVWDLVTNSSGQSRWTSTREFLRTTTSSTLHSVGVLARSIGNLAGTSPITVAPRLSCGSS SSDVIGHAVLAAPQRRGVLGEVLHEVGGGISDAVTKPIRGAREGGVSGFLIGIAAGVAGL AGRPVFGFFRGVSVTSEFYARLLGGLGALTEHEARHLGLQRNYLIVSTSARGAPVWEAAE DVEGQDSGTGAATHVNRVSRASLPRGQYILTHAMYDQVFADVPRWRRGEETNVRLAVGRV GIYNTALHTPYAALCTFLSPSEFRDALPCALTALLAGNIISLLACNCTVGGFRGSAVVEK GNDKAPDASDTGEGQGTQARLAYECERASYIKASLGMRASHTYVADEVFVQVCSLEEIEA VLKETEAQKKYSRALARAIGAAGERLLAP
Select program and database:
BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot
UniProt
RefSeq
PDBSTR
UniRef50
UniRef90
UniRef100
Virus-Host Database
BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
KEGG GENOME
Favorite
organism code or category
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
Ocean (MATOU)
EGENES
nr-nt (GenBank, EMBL and RefSeq)
dbEST
dbGSS
HTGs
dbSTS
RefSeq
Ribosomal Databases
SILVA (SSU, 16S/18S)
SILVA (LSU, 23S/28S)
PR2 (Protist Reference)
RDP (Prokaryotic 16S)
RDP (Fungal 28S)
EPD
Virus-Host Database
CDS
Genomes
Scoring matrix:
BLOSUM62
BLOSUM80
PAM30
PAM70
PAM250
(except for BLASTN)
Filter:
None
DUST in BLASTN, SEG in others
Output options:
Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:
Optional parameters:
(see
manual
for details)
E-value threshold
Alignment view:
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
Get ASN.1 for SeqAnnot
Get ASN.1 for the Blast Object
(except for BLASTX)
Additional options:
(delimited by whitespaces)
Feedback
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GenomeNet
Kyoto University Bioinformatics Center