Sequence Similarity Search

BLAST Search

BLAST	FASTA	KEGG2

Enter query sequence:

Sequence data

>sly:101256472 K12662 U4/U6 small nuclear ribonucleoprotein PRP4 | (RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein (N)
atggatgctatggatgctgaggatgaggttcctgtttcaacttcagaaacttcaactcta
gttgatgataattcaactgtggttaatgctacaggtgcagttaatcttcaaccagttcca
gctgtcattccaccagttgttccgacggctatccttcctcctgtcgtgcctgcaattgct
ccaaggcttgcagttcctccccctattcctcccccattagctccgttgcctgttcgtcca
cctgtccttaggcctccggtagcacagaatggagaaatgcaagagaatgattcagattca
gaccttgaagaaatggtatccggtcgtggtgctgcgggctccacgcaagaatatgagatc
tctgaggagagtagaattgtccgagagaggcaggagaaggccctgcaggagcttctcatg
aagagacgtgctgctgcgcttgcagttcccacaaatgatatggccgttcgagctcgactg
cgaaggcttggcgaacccataactctctttggagaaagggagatggaaagaagggatcga
ctgcggatgcttatggcaaggcttgatgcagaagggcagctggaaaagctgatgaaagct
catgaggatgaagaagctgcagcttctgcagcaccagcagaggaggaagatattcaatac
cctttttacacagaaggatcgaaagcacttttagatgctagggtagaaatcgcaaagtat
tccttagttaagtcagctttacgtctccatcgcgcaaggaggaaaagggatgatccagat
gaagatgtggatgcagaggttgattgggctttaaagcaagcagggagcctggcccttgat
tgcagtgaaattggagacgatagacccctttttggatgctcgctttcacatgatggaaaa
atgcttgcgacctgttctctgagtggaatagcaaagatatggagtatgcctcaagtgcaa
aaggtttccactctaaaaggtcacactgaacgagctactgatgttgtgttctctccgaca
agcaattatttagctactgcatctgctgacaagaccgcaaggttatggaactcagaaggt
tctctcctcagaacttttgaggggcatttggaccgtctagctcggattgcttttcatcct
tctggaaaatacttgggcacagctagcttcgacaaaacttggagattatggaatgtggag
agtggtgaagagctgcttttgcaagaaggtcacagtaggagtgtttatggattgtctttt
caccatgatggttcattagtggcatcatgcgggttggatgcacttgttcgagtgtgggat
ttaaggactgggcgaagtattcttgctctagaaggccacgtaaaaccggttcttggtgtc
agtttttcaccgaatggttatcatttggctagtggtggtgaagataatacctgtcgtatt
tgggacttgcggcagagaagatcttcttacatcataccagctcactccaatcttatctct
caagttaaatttgagcctcaggagggatactttttggctacagcttcgtatgatatgact
gctaaggtatggtcatcaagagatttcaaacctgtaaaaacactttctggtcatgaagca
aaaatcatgtcattggatgttgcatcagatggacaattcattacaaccgtgtcttatgat
cgaacaatcaagctatggtcaagcaaaaacattgagaaggaagagaaaatggatatggac
tag

Select program and database:

BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
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KEGG MGENES

	Environmental Organismal
	Favorite samples

Microbial Reference Genes

Ocean (OM-RGC) Human gut (IGC)

nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot UniProt RefSeq
PDBSTR
UniRef50 UniRef90 UniRef100
Virus-Host Database

BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

KEGG GENOME

	Favorite organism code or category

Microbial Reference Genes

	Ocean (OM-RGC) Human gut (IGC)
	Ocean (MATOU)

EGENES
nr-nt (GenBank, EMBL and RefSeq)
     dbEST dbGSS HTGs dbSTS
     RefSeq
Ribosomal Databases
     SILVA (SSU, 16S/18S) SILVA (LSU, 23S/28S)
     PR2 (Protist Reference)
     RDP (Prokaryotic 16S) RDP (Fungal 28S)
EPD
Virus-Host Database
     CDS Genomes

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