Sequence Similarity Search

BLAST Search

BLAST	FASTA	KEGG2

Enter query sequence:

Sequence data

>tr:A0A1Y4GNW3_9BACT [A0A1Y4GNW3] RecName: Full=Phage MuF C-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
MGIYDEVRSRTGNSGIMVGPALSADEAHALGLSSVNPLVDELERSYERYVTENPDEAAAR
AWNAERVGVPLWVQERSDKYANEAKKRLALLEKGTPDWKKLADASPVTASFMTGDGVMAS
AHDDVQGLADIEDVTHSLSYLRLNYKDKLAYLRNERIVPRLSVPTLDVKDRPGMLASLPL
LNPRAIGRGGWDGLSEEELVRLRDKPVSQTVAEAVRAIDSWASDTSFGKGITSGYEMSAI
GTEAHNLFLANSLGRGSEAQWVELEKRVLALDREKPEGWLSGMLYETGKFIGQQAQGAWT
SGLMSAAGAGLGAYAGSLGTAAFAGSVLNPVGGAVLAGAAAGWWLGTKAGVFTQASKTEM
GLDLIERRMMRGADGEYISNFAAGLGSLAVGAVNGALELTEWTVAGRPFTGVARRVVSPA
VMKSVSQNIASRLSALPSMGKYGQAARYWGSNVFAESMTEVFQELVPITVDEMQKHALLD
GYNARRLGDVTAELTDTFMSSLYSFALISAVGPVAGLAAGRFNGELTRREFEAAQTKLFN
MKMDNFKERIGASKVFKRFPSMSREHREAVLENADLSRAYIGAEKVETLFQQGLLPNYED
YGSAADWAQDYLGVTEDEYNESMQTGYEMELAAAKLFDAVESSDETKVNEIYDAIARDIR
FSRGGMTLAEAEAADKSISEIRREDFFNIGARTDEAREEEASARRVYEASRMQMEASGID
AETAAADSFIRSAAYRRLAGMYNSALDEKTRGNKKLLAEDMERMFPLVIEKDGTGNVTGL
TFQQTAWHGSPFRFDRFSTENIGTGEGAQAHGWGLYFAGDREVSEGYRKKLRSGRSRGQL
YKVDIPENDVLLDEQKNFAEQPETVRSALKAVYESFPAEKLALVRDELKALVRRDASLEE
EGDALRRERQKLLSRRSALNTVNAERPSENRGLFVEKGNTARFDRGVKYLHEMYYEEQIA
RLESDEAYLASEKDAVTDGLAEVTRKMEENERRIEEKRAEKKAAIDVASLDELLSRMDGR
MLYNGIVIMTDSPRAASETLNAHGVKGVTYEGELDGRSYVVFDDNDVDVMQTYYQAGALF
ERAKEAIKRVIDVAFSDKTKHRLEIISGVQQWLSDTVLQSRGLDIAGYRHCIDTSSVRHI
FKQHGDEKSERSRGQIPVTENDLLKIPEVIASPDFIVLGTKNRIGNEGIIYVKNMPNGST
FYVEEVRGKNKKQLVTDTMWIKAGTSDADSIRNTPTLYARSDTGTIDIIANPANNGGGNP
YLQPSRGSITFPQYQGAPITIHLGKDADRSTFVHEFAHLYFWHLRNLASLDTVQNTAAWE
GPEAEWNRDLKIVSRWWGENAENIARQAAQFVAEGERGGLSADGFREWLSSGMERRSAAG
AAYDRAAQEYFARGFERYLMEGKTPANSRELLSVFRRFKKWLCDIYRTLTELDVELSDEV
RSVFGRMVAADEAIEQLRAERQVDAVMAARREAAEAEARETDEANSAFAPVREPEPEYDI
AYDPYEDAKENLLGLLFSEDMPERRREMAERAEEIRPQVLQAVLAEPGYRALAMMEQAPE
LRLNPGAVVDMFSETVLSAMPEGSIADDGMTDIEFAARSLNFKSAHEMIDAMAGRRTIKE
EVDARVREIVAREFTDTFSSPAAMDAAAEAALYENDEHGERLAAEAEANFDDALELAARE
EEAEAEFRAIFEADEAARVENEDPVSRTNVVRWMRAHGRPRYSYVAREMGQEDAQALLKR
YGPSFFSKEGRGLNDIAQELDGMGIRVGGEAGLFNLLMSEAVPESPLDLAREEGRREVMD
EYRTRYKKHVAGQERRAARNAERIRRIEAKAEEKTGKAKARYKAAAERLKSQMKENHDKA
VALRKEIRARYQKRKTELEEKYKAMGERRRASFIEQKNKDWTRRALNRYLSGFRTHIEKS
VSRKGLHDAAKTAARNQVAGMTVQQLYDVTGWVRVEKDSRAAADRALRNFDEKAFREARE
KELHAHEMIRAMYRARRRAEYIRSRLVKYSNRKQKQTFGMIPEFLYQLDMLLTRFDFTKR
TKKEVAALTPKDIVREAKSLSEFIKGQTDAGVPLMIPDWIAQSESQMKYEGLFVHQLENA
FNAVQNIMQTGRDEKKTIARAKNLELSGIEAAVVERAQGYFGKDKVDGDTHIKVARKDPN
VAADVLLDLNTIEAMCRGLDGFQDDGPMQDFFFRPVREAVSREYAELNRMFGEFRSLKLR
VYGKDFKADMTPKDIGIHEYKRETDRETGKVYHVPTKEKSFFTQENIICAALNMGNADNL
ARLKDGWGWTDADIEKIKEQMSQKDWEYVQGVWDLLDTMWPKIKKVHELMTGMTIEKVEA
KPVVTKYGTFRGGYYPIVTDLRYSETAAAQNEREEVFASAPLNFASKHTKSGHRKARAEN
VLGRPPLLSFSVLDNHVANVIHDYEMASVLRDAGKILRLDKVKSVITAVYGDRGYRNFRK
WLNDIAANTKNNGVASGSGDRIVNGIKSKTAMFALGGNLGGAVSQLLGYFPLAHRIGFVN
TALAILDGLNPGSRTYDFVREKSAFMREQMDDGNSEVRKLRQNWTTNDHGISRAADMFLS
IYPFFQNMCNVPGWAQCYKIGLKRYRSEAKAVAYADSVIRQTQSASTIADLTSFERSGTI
GQLTTMFYSWFRVMYQMQNEAVMRVKYEHGINRVKDLASYAFYILIAQSVAEALLRGNGP
EPEDGEDPMWSWAKWTTARVLLSPLSTVPFAREFGSAIDNNFKFGVQLTPAQGGLDALAR
LLKIAMRQGGNALSGEDIEWGDVAEGAATVAGYRYGVPNRKMIQAAKAFWAYYDEEEAIP
WAYLILGGGYKPKDE

Select program and database:

BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
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KEGG MGENES

	Environmental Organismal
	Favorite samples

Microbial Reference Genes

Ocean (OM-RGC) Human gut (IGC)

nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot UniProt RefSeq
PDBSTR
UniRef50 UniRef90 UniRef100
Virus-Host DB

BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

KEGG GENOME

	Favorite organism code or category

Microbial Reference Genes

	Ocean (OM-RGC) Human gut (IGC)
	Ocean (MATOU)

nr-nt (GenBank, EMBL and RefSeq)
     dbEST dbGSS HTGs dbSTS
     RefSeq
Ribosomal Databases
     SILVA (SSU, 16S/18S) SILVA (LSU, 23S/28S)
     PR2 (Protist Reference)
     RDP (Prokaryotic 16S) RDP (Fungal 28S)
EPD
Virus-Host DB Genes
     Genomes
Environmental Viral Genome

Scoring matrix:

(except for BLASTN)

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Output options:

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Optional parameters: (see manual for details)

E-value threshold
Alignment view:	(except for BLASTX)
Additional options:	(delimited by whitespaces)

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