| Order | Family | Genus | Species |
|---|---|---|---|
| Cercomonadida | 2 | 10 | 263 |
| Cryomonadida | 2 | 5 | 39 |
| Euglyphida | 6 | 16 | 74 |
| Glissomonadida | 5 | 15 | 62 |
| Marimonadida | 0 | 2 | 6 |
| Phaeocalpida | 3 | 5 | 10 |
| Phaeoconchia | 2 | 3 | 7 |
| Phaeocystida | 2 | 4 | 8 |
| Phaeodendrida | 0 | 0 | 0 |
| Phaeogromida | 2 | 6 | 19 |
| Phaeogymnocellida | 2 | 2 | 6 |
| Phaeosphaerida | 3 | 4 | 13 |
| Spongomonadida | 1 | 1 | 10 |
| Tectofilosida | 1 | 7 | 24 |
| Thaumatomonadida | 1 | 10 | 69 |
| Ventricleftida | 1 | 2 | 12 |