PathPred: Pathway Prediction server

PathPred	KEGG2

About PathPred

PathPred is a web-based server to predict plausible enzyme-catalyzed reaction pathways from a query compound using the information of RDM patterns and chemical structure alignments of substrate-product pairs. This server provides plausible reactions and transformed compounds, and displays all predicted reaction pathways in tree-shaped graph.

- PathPred help

Reference pathway:

Biosynthesis of Secondary Metabolites (Plants)

Enter initial compound: (

optional input form)

	KEGG Compound ID	(Ex) C06594
	MOL File Name
	MOL File Text
	SMILES	(Ex) c1(=O)(ccc2(c(o1)cc(O)cc2))

Enter final compound: (in one of the four forms)

	KEGG Compound ID	(Ex) C00160
	MOL File Name
	MOL File Text
	SMILES	(Ex) C1(=C(C(=CC2=C1OC(=O)C=C2)OC)OC)O

Options:

	E-mail address
	Simcomp Threshold	(0.1 - 0.9)
	Prediction cycle	cycles ( >= 0 )

Pathway Prediction server

Feedback	KEGG	GenomeNet	Kyoto University Bioinformatics Center