Nicotiana occidentalis

Nicotiana occidentalis

Scientific Name	Nicotiana occidentalis [TAX:200313]
Lineage	cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Known viruses (18)

Scientific Name	actinidia virus A [TAX:3240217]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus; Vitivirus alphactinidiae
RefSeq	NC_043087 Actinidia virus A isolate TP7-93A putative replicase (ORF1) gene, partial cds; and hypothetical protein (ORF2), movement protein (ORF3), coat protein (ORF4), and RNA-binding protein (ORF5) genes, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_043087 ICTV: 202302327

Scientific Name	actinidia virus B [TAX:3240218]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus; Vitivirus betactinidiae
RefSeq	NC_016404 Actinidia virus B, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_016404 ICTV: 202302328

Scientific Name	Artichoke Italian latent virus [TAX:46075]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus italiaense
RefSeq	NC_043684 Artichoke italian latent virus Replicase gene for polyprotein, p1 region, segment RNA1, isolate AILV-V, clone Elbeaino T. NC_043685 Artichoke italian latent virus gene for polyprotein, p2 region, segment RNA2, isolate AILV-V, clone Elbeaino T.
Evidence	Literature
Reference	PMID: 28247096
Authors	Elbeaino T, Belghacem I, Mascia T, Gallitelli D, Digiaro M
Title	Next generation sequencing and molecular analysis of artichoke Italian latent virus.
Journal	Arch Virol. 2017 Jun;162(6):1805-1809.
DBLINKS	KEGG BRITE: NC_043684 NC_043685 ICTV: 202302100 ViralZone: family, genus Descriptions of Plant Viruses: 176

Scientific Name	Black raspberry necrosis virus [TAX:367301]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Sadwavirus; Stramovirus; Sadwavirus rubi
RefSeq	NC_008182 Black raspberry necrosis virus RNA1, complete genome. NC_008183 Black raspberry necrosis virus RNA2, complete genome.
Evidence	Literature
Reference	PMID: 18942935
Authors	Halgren A, Tzanetakis IE, Martin RR
Title	Identification, Characterization, and Detection of Black raspberry necrosis virus.
Journal	Phytopathology. 2007 Jan;97(1):44-50.
DBLINKS	KEGG BRITE: NC_008182 NC_008183 KEGG GENOME: T40305 ICTV: 202302154 ViralZone: family, genus Plant Viruses Online: 100 Descriptions of Plant Viruses: 333

Scientific Name	Blueberry latent spherical virus [TAX:1071488]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus vaccinii
RefSeq	NC_038763 Blueberry latent spherical virus genomic RNA, segment: 2, complete sequence. NC_038764 Blueberry latent spherical virus genomic RNA, segment: 1, complete sequence.
Evidence	Literature
Reference	PMID: 22109710
Authors	Isogai M, Tatuto N, Ujiie C, Watanabe M, Yoshikawa N
Title	Identification and characterization of blueberry latent spherical virus, a new member of subgroup C in the genus Nepovirus.
Journal	Arch Virol. 2012 Feb;157(2):297-303.
DBLINKS	KEGG BRITE: NC_038763 NC_038764 ICTV: 202302104 ViralZone: family, genus

Scientific Name	Carnation vein mottle virus [TAX:82847]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus dianthi
GenBank	OM323987 Carnation vein mottle virus isolate DSMZ PV-0251 polyprotein gene, complete cds; and PIPO gene, partial cds.
Evidence	Literature
Reference	Detection of Important Viruses on Dianthus Caryophillus L. in Markazi Province, Iran, and Molecular Analysis of Carnation Vein Mottle Virus
DBLINKS	ViralZone: genus, family Descriptions of Plant Viruses: 78

Scientific Name	Cherry twisted leaf associated virus [TAX:1424279]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Quinvirinae; Robigovirus
RefSeq	NC_024449 Cherry twisted leaf associated virus isolate CTLV_8431, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 24737006
Authors	James D, Varga A, Lye D
Title	Analysis of the complete genome of a virus associated with twisted leaf disease of cherry reveals evidence of a close relationship to unassigned viruses in the family Betaflexiviridae.
Journal	Arch Virol. 2014 Sep;159(9):2463-8.
DBLINKS	KEGG BRITE: NC_024449 ICTV: 202302294

Scientific Name	Ethiopian tobacco bushy top virus satellite RNA [TAX:1538550]
Lineage	Viruses; Satellites; RNA satellites
RefSeq	NC_024807 Ethiopian tobacco bushy top virus satellite RNA isolate 18-2, complete sequence.
Evidence	Literature
Reference	PMID: 25119677
Authors	Abraham AD, Menzel W, Bekele B, Winter S
Title	A novel combination of a new umbravirus, a new satellite RNA and potato leafroll virus causes tobacco bushy top disease in Ethiopia.
Journal	Arch Virol. 2014 Dec;159(12):3395-9.
DBLINKS	KEGG BRITE: NC_024807

Scientific Name	Fig badnavirus 1 [TAX:1034096]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Badnavirus; Badnavirus fici
RefSeq	NC_017830 Fig badnavirus 1, complete genome.
Evidence	Literature
Reference	PMID: 22992110
Authors	Laney AG, Hassan M, Tzanetakis IE
Title	An integrated badnavirus is prevalent in fig germplasm.
Journal	Phytopathology. 2012 Dec;102(12):1182-9.
DBLINKS	KEGG BRITE: NC_017830 ICTV: 202302838 ViralZone: family, genus

Scientific Name	Grapevine Anatolian ringspot virus [TAX:223769]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus anatoliense
RefSeq	NC_018384 Grapevine Anatolian ringspot virus RNA 2, complete genome.
Evidence	Literature
Reference	PMID: 15830151
Authors	Ghanem-Sabanadzovic NA, Sabanadzovic S, Digiaro M, Martelli GP
Title	Complete nucleotide sequence of the RNA-2 of grapevine deformation and Grapevine Anatolian ringspot viruses.
Journal	Virus Genes. 2005 May;30(3):335-40.
DBLINKS	KEGG BRITE: NC_018384 ICTV: 202302113 ViralZone: family, genus

Scientific Name	Grapevine virus B [TAX:35289]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus
RefSeq	NC_003602 Grapevine virus B, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 7944948
Authors	Minafra A, Saldarelli P, Grieco F, Martelli GP
Title	Nucleotide sequence of the 3' terminal region of the RNA of two filamentous grapevine viruses.
Journal	Arch Virol. 1994;137(3-4):249-61.
DBLINKS	KEGG BRITE: NC_003602 ICTV: 202302330

Scientific Name	Okra mosaic virus [TAX:70822]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Tymoviridae; Tymovirus; Tymovirus abelmoschi
RefSeq	NC_009532 Okra mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 18049886
Authors	Stephan D, Siddiqua M, Ta Hoang A, Engelmann J, Winter S, Maiss E
Title	Complete nucleotide sequence and experimental host range of Okra mosaic virus.
Journal	Virus Genes. 2008 Feb;36(1):231-40.
DBLINKS	KEGG BRITE: NC_009532 ICTV: 202302371 Descriptions of Plant Viruses: 128

Scientific Name	Potato rough dwarf virus [TAX:106118]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus; Potato virus P
GenBank	EU020009 Potato rough dwarf virus isolate Arg, complete genome.
Evidence	GenBank

Scientific Name	Potato virus P [TAX:329164]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus
RefSeq	NC_009759 Potato rough dwarf virus, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 18663406
Authors	Massa GA, Portantier M, Segretin ME, Bravo-Almonacid FF, Feingold SE
Title	Comparison of complete sequences of potato rough dwarf virus and potato virus P and their relationships to other carlaviruses.
Journal	Arch Virol. 2008;153(9):1787-9.
DBLINKS	KEGG BRITE: NC_009759 ICTV: 202302273 Plant Viruses Online: 639

Scientific Name	Strawberry latent ringspot virus [TAX:28351]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Stralarivirus; Stralarivirus fragariae
RefSeq	NC_006964 Strawberry latent ringspot virus RNA1, complete sequence. NC_006965 Strawberry latent ringspot virus RNA2, complete sequence.
Evidence	Literature
Reference	PMID: 16837095
Authors	Tzanetakis IE, Postman JD, Gergerich RC, Martin RR
Title	A virus between families: nucleotide sequence and evolution of Strawberry latent ringspot virus.
Journal	Virus Res. 2006 Nov;121(2):199-204.
DBLINKS	KEGG BRITE: NC_006964 NC_006965 KEGG GENOME: T40295 ICTV: 202302156 ViralZone: family Descriptions of Plant Viruses: 126

Scientific Name	Strawberry mottle virus [TAX:167161]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Sadwavirus; Stramovirus; Sadwavirus fragariae
RefSeq	NC_003445 Strawberry mottle virus RNA1 gene for polyprotein, genomic RNA. NC_003446 Strawberry mottle virus RNA2 gene for polyprotein, genomic RNA.
Evidence	Literature
Reference	PMID: 11752720
Authors	Thompson JR, Leone G, Lindner JL, Jelkmann W, Schoen CD
Title	Characterization and complete nucleotide sequence of Strawberry mottle virus: a tentative member of a new family of bipartite plant picorna-like viruses.
Journal	J Gen Virol. 2002 Jan;83(Pt 1):229-39.
DBLINKS	KEGG BRITE: NC_003445 NC_003446 KEGG GENOME: T40298 ICTV: 202302157 ViralZone: family, genus Plant Viruses Online: 761

Scientific Name	Streptocarpus flower break virus [TAX:335187]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_008365 Streptocarpus flower break virus, complete genome.
Evidence	Literature
Reference	Verhoeven, J. T. J., Bouwen, I., & Roenhorst, J. W. (1995). A new flower breaking tobamovirus ofStreptocarpus. European journal of plant pathology, 101(3), 311-318.
DBLINKS	KEGG BRITE: NC_008365 ICTV: 202305443

Scientific Name	Sunflower mild mosaic virus [TAX:715480]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus helitenuitessellati
RefSeq	NC_021065 Sunflower mild mosaic virus isolate Entre Rios, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_021065 ICTV: 202304683 ViralZone: genus, family