Cucurbita pepo

Cucurbita pepo

Scientific Name	Cucurbita pepo [TAX:3663]
Lineage	cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Known viruses (19)

Scientific Name	Blackberry virus F [TAX:2560349]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Badnavirus; Badnavirus phirubi
RefSeq	NC_029303 Blackberry Virus F isolate BBV-3X, complete genome.
Evidence	Literature
Reference	PMID: 30682310
Authors	Shahid MS, Aboughanem-Sabanadzovic N, Sabanadzovic S, Tzanetakis IE
Title	Genomic Characterization and Population Structure of a Badnavirus Infecting Blackberry.
Journal	Plant Dis. 2017 Jan;101(1):110-115.
Comment	Labolatry host: Rubus, Beta vulgaris, Chenopodium quinoa , Vigna unguiculata, Cucumis melo, Cucumis sativus,Glycine max, Gomphrena globosa, Nicotiana rustica, Nicotiana tabacum, Pisum sativum, Cucurbita pepo, Solanum lycopersicum, Spinacia oleracea
DBLINKS	KEGG BRITE: NC_029303 ICTV: 202306642 ViralZone: family, genus

Scientific Name	Cucumber mosaic virus [TAX:12305]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Bromoviridae; Cucumovirus
RefSeq	NC_001440 Cucumber mosaic virus RNA 3, complete sequence. NC_002034 Cucumber mosaic virus RNA 1, complete sequence. NC_002035 Cucumber mosaic virus RNA 2, complete sequence.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001440 NC_002034 NC_002035 KEGG GENOME: T40215 ICTV: 202302772 Descriptions of Plant Viruses: 1, 213, 400

Scientific Name	Cucurbit yellow mosaic alphasatellite [TAX:1819678]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; unclassified Begomovirus-associated alphasatellites
RefSeq	NC_029907 Cucurbit yellow mosaic alphasatellite isolate 51SA, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_029907

Scientific Name	Kyuri green mottle mosaic virus [TAX:111970]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_003610 Kyuri green mottle mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 11765913
Authors	Yoon JY, Min BE, Choi SH, Ryu KH
Title	Completion of nucleotide sequence and generation of highly infectious transcripts to cucurbits from full-length cDNA clone of Kyuri green mottle mosaic virus.
Journal	Arch Virol. 2001;146(11):2085-96.
Comment	Generation of biologically active in vitro transcripts of the virus and its infectivity for systemic host plants was confirmed.
DBLINKS	KEGG BRITE: NC_003610 ICTV: 202305431

Scientific Name	Lettuce infectious yellows virus [TAX:31713]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Closteroviridae; Crinivirus
RefSeq	NC_003617 Lettuce infectious yellows virus RNA 1, complete genome. NC_003618 Lettuce infectious yellows virus RNA 2, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003617 NC_003618 KEGG GENOME: T40216 ICTV: 202303012 Descriptions of Plant Viruses: 369

Scientific Name	Melon chlorotic leaf curl virus-[Guatemala] [TAX:223286]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Melon chlorotic leaf curl virus
RefSeq	NC_004732 Melon chlorotic leaf curl virus-[Guatemala] component A, complete sequence. NC_028138 Melon chlorotic leaf curl virus-[Guatemala] nuclear shuttle protein (BV1) and movement protein (BC1) genes, complete cds.
Evidence	Literature
Reference	PMID: 18057231
Authors	Idris AM, Mills-Lujan K, Martin K, Brown JK
Title	Melon chlorotic leaf curl virus: characterization and differential reassortment with closest relatives reveal adaptive virulence in the squash leaf curl virus clade and host shifting by the host-restricted bean calico mosaic virus.
Journal	J Virol. 2008 Feb;82(4):1959-67.
DBLINKS	KEGG BRITE: NC_004732 NC_028138 ICTV: 202303287 ViralZone: genus, family

Scientific Name	Melon yellow spot virus [TAX:89471]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus meloflavi
RefSeq	NC_008300 Melon yellow spot virus segment S, complete sequence. NC_008306 Melon yellow spot virus segment L, complete sequence. NC_008307 Melon yellow spot virus segment M, complete sequence.
Evidence	Literature
Reference	Kato, K., Hanada, K., & Kameya Iwaki, M. (1999). Transmission mode, host range and electron microscopy of a pathogen causing a new disease of melon (Cucumis melo) in Japan. Annals of the Phytopathological Society of Japan (Japan). Kato, K., Hanada, K., & Kameya Iwaki, M. (1999). Transmission mode, host range and electron microscopy of a pathogen causing a new disease of melon (Cucumis melo) in Japan. Annals of the Phytopathological Society of Japan (Japan).
DBLINKS	KEGG BRITE: NC_008300 NC_008306 NC_008307 ICTV: 202306666 ViralZone: family, genus

Scientific Name	Papaya ringspot virus W [TAX:12207]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus papayanuli; Papaya ringspot virus
GenBank	AY010722 Papaya ringspot virus strain W, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Pepo aphid-borne yellows virus [TAX:1462681]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus
RefSeq	NC_030225 Pepo aphid-borne yellows virus isolate RSA BB Marrow, complete genome.
DBLINKS	KEGG BRITE: NC_030225 ICTV: 202305863 ViralZone: genus, family

Scientific Name	Squash chlorotic leaf spot virus [TAX:1810396]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Torradovirus; Torradovirus cucurbitae
RefSeq	NC_035215 Squash chlorotic leaf spot virus, RNA2, complete sequence. NC_035221 Squash chlorotic leaf spot virus, RNA1, complete sequence.
Evidence	Literature
Reference	PMID: 26935919
Authors	Lecoq H, Verdin E, Tepfer M, Wipf-Scheibel C, Millot P, Dafalla G, Desbiez C
Title	Characterization and occurrence of squash chlorotic leaf spot virus, a tentative new torradovirus infecting cucurbits in Sudan.
Journal	Arch Virol. 2016 Jun;161(6):1651-5.
DBLINKS	KEGG BRITE: NC_035215 NC_035221 ICTV: 202302150 ViralZone: family, genus

Scientific Name	Squash leaf curl virus [TAX:10829]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_001936 Squash leaf curl virus A component DNA, complete sequence. NC_001937 Squash leaf curl virus B component DNA, complete sequence.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001936 NC_001937 KEGG GENOME: T40260 ICTV: 202303373 ViralZone: genus, family Descriptions of Plant Viruses: 358

Scientific Name	Squash yellow mild mottle virus [TAX:1051966]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_003860 Squash yellow mild mottle virus DNA B, complete sequence. NC_003865 Melon chlorotic leaf curl virus DNA A, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_003860 NC_003865 ICTV: 202303287 ViralZone: genus, family

Scientific Name	Tomato leaf curl New Delhi betasatellite [TAX:478812]
Lineage	Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite
RefSeq	NC_005359 Tomato leaf curl New Delhi virus-associated DNA beta, complete genome.
Evidence	Literature
Reference	Juárez, M., Tovar, R., Fiallo-Olivé, E., Aranda, M. A., Gosálvez, B., Castillo, P., ... & Navas-Castillo, J. (2015). First detection of tomato leaf curl New Delhi virus infecting zucchini in Spain. Euphytica.
DBLINKS	KEGG BRITE: NC_005359

Scientific Name	Turnip yellows virus [TAX:131083]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus
RefSeq	NC_003743 Turnip yellows virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003743 ICTV: 202303790 ViralZone: genus, family

Scientific Name	Zucchini green mottle mosaic virus [TAX:111418]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_003878 Zucchini green mottle mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 18943088
Authors	Yoon JY, Min BE, Choi JK, Ryu KH
Title	Genome Structure and Production of Biologically Active In Vitro Transcripts of Cucurbit-Infecting Zucchini green mottle mosaic virus.
Journal	Phytopathology. 2002 Feb;92(2):156-63.
DBLINKS	KEGG BRITE: NC_003878 ICTV: 202305457

Scientific Name	Zucchini lethal chlorosis virus [TAX:83872]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus cucurbichlorosis
RefSeq	NC_031758 Zucchini lethal chlorosis virus isolate ZLCV-SP segment M, complete sequence. NC_031759 Zucchini lethal chlorosis virus isolate ZLCV-SP segment S, complete sequence. NC_031762 Zucchini lethal chlorosis virus isolate ZLCV-SP segment L, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27388209
Authors	Lima RN, De Oliveira AS, Leastro MO, Blawid R, Nagata T, Resende RO, Melo FL
Title	The complete genome of the tospovirus Zucchini lethal chlorosis virus.
Journal	Virol J. 2016 Jul 7;13:123.
DBLINKS	KEGG BRITE: NC_031758 NC_031759 NC_031762 ICTV: 202300189 ViralZone: family, genus

Scientific Name	Zucchini shoestring virus [TAX:1679239]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus peporesticulae
RefSeq	NC_043172 Zucchini shoestring virus polyprotein gene, complete cds; and PIPO gene, partial cds.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27216927
Authors	Ibaba JD, Laing MD, Gubba A
Title	Zucchini shoestring virus: a distinct potyvirus in the papaya ringspot virus cluster.
Journal	Arch Virol. 2016 Aug;161(8):2321-3.
DBLINKS	KEGG BRITE: NC_043172 ICTV: 202304719 ViralZone: genus, family

Scientific Name	Zucchini yellow fleck virus [TAX:390849]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus pepo
GenBank	ON456303 Zucchini yellow fleck virus isolate DSMZ PV-0379, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 35941394
Authors	Sareli K, Winter S, Chatzivassiliou EΚ, Knierim D, Margaria P
Title	High molecular diversity of full-length genome sequences of zucchini yellow fleck virus from Europe.
Journal	Arch Virol. 2022 Nov;167(11):2305-2310.
DBLINKS	ViralZone: genus, family

Scientific Name	Zucchini yellow mosaic virus [TAX:12232]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus cucurbitaflavitesselati
RefSeq	NC_003224 Zucchini yellow mosaic virus, complete genome.
Evidence	Literature
Reference	Complete genome sequence and genetic organization of a Taiwan isolate of Zucchini yellow mosaic virus Shih-Shun Lin, Roger F. Hou, and Shyi-Dong Yeh
Comment	Laboratory host: Cucurbita pepo
DBLINKS	KEGG BRITE: NC_003224 ICTV: 202304722 ViralZone: genus, family Descriptions of Plant Viruses: 282