Lactuca sativa

Lactuca sativa

Scientific Name	Lactuca sativa [TAX:4236]
Lineage	cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
DBLINKS	KEGG GENOME: T05352

Known viruses (22)

Scientific Name	Beet black scorch virus [TAX:196375]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Betanecrovirus; Betanecrovirus betae
RefSeq	NC_004452 Beet black scorch virus, complete genome.
Evidence	Literature
Reference	PMID: 12491108
Authors	Cao Y, Cai Z, Ding Q, Li D, Han C, Yu J, Liu Y
Title	The complete nucleotide sequence of Beet black scorch virus (BBSV), a new member of the genus Necrovirus.
Journal	Arch Virol. 2002 Dec;147(12):2431-5.
DBLINKS	KEGG BRITE: NC_004452 ICTV: 202305220

Scientific Name	Beet ringspot virus [TAX:191547]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus betae
RefSeq	NC_003693 Beet ringspot virus RNA 1, complete sequence. NC_003694 Beet ringspot virus RNA 2, complete sequence.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003693 NC_003694 ICTV: 202302102 ViralZone: family, genus Plant Viruses Online: 823

Scientific Name	Beet western yellows virus [TAX:12042]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus
RefSeq	NC_004756 Beet western yellows virus, complete genome.
Evidence	Literature
Reference	PMID: 20565633
Authors	Stevens M, Freeman B, Liu HY, Herrbach E, Lemaire O
Title	Beet poleroviruses: close friends or distant relatives?
Journal	Mol Plant Pathol. 2005 Jan 1;6(1):1-9.
DBLINKS	KEGG BRITE: NC_004756 KEGG GENOME: T40213 ICTV: 202303776 ViralZone: genus, family Descriptions of Plant Viruses: 89

Scientific Name	Endive necrotic mosaic virus [TAX:73423]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus chichorii
RefSeq	NC_034273 Endive necrotic mosaic virus strain ENMV-FR, complete genome.
Evidence	Literature
Reference	Desbiez, C., Schoeny, A., Maisonneuve, B., Berthier, K., Bornard, I., Chandeysson, C., ... & Lot, H. (2016). Molecular and biological characterization of two potyviruses infecting lettuce in southeastern France. Plant Pathology.
DBLINKS	KEGG BRITE: NC_034273 ICTV: 202304611 ViralZone: genus, family

Scientific Name	Lettuce chlorosis virus [TAX:642478]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Closteroviridae; Crinivirus
RefSeq	NC_012909 Lettuce chlorosis virus RNA1, complete genome. NC_012910 Lettuce chlorosis virus RNA2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_012909 NC_012910 ICTV: 202303011

Scientific Name	Lettuce chordovirus 1 [TAX:2200955]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; unclassified Betaflexiviridae
RefSeq	NC_040627 Lettuce chordovirus 1 isolate JG1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_040627 ICTV: 202315088

Scientific Name	Lettuce infectious yellows virus [TAX:31713]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Closteroviridae; Crinivirus
RefSeq	NC_003617 Lettuce infectious yellows virus RNA 1, complete genome. NC_003618 Lettuce infectious yellows virus RNA 2, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003617 NC_003618 KEGG GENOME: T40216 ICTV: 202303012 Descriptions of Plant Viruses: 369

Scientific Name	Lettuce Italian necrotic virus [TAX:1688637]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus lactucaitalicense
RefSeq	NC_027706 Lettuce italian necrotic virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_027706 ICTV: 202304632 ViralZone: genus, family

Scientific Name	Lettuce mosaic virus [TAX:12202]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus lactucae
RefSeq	NC_003605 Lettuce mosaic virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_003605 KEGG GENOME: T40314 ICTV: 202304633 ViralZone: genus, family Descriptions of Plant Viruses: 399, 9

Scientific Name	Lettuce necrotic leaf curl virus [TAX:1358807]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Torradovirus; Torradovirus lactucae
RefSeq	NC_035214 Lettuce necrotic leaf curl virus, RNA1, complete sequence. NC_035219 Lettuce necrotic leaf curl virus, RNA2, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 24142269
Authors	Verbeek M, Dullemans AM, van Raaij HM, Verhoeven JT, van der Vlugt RA
Title	Lettuce necrotic leaf curl virus, a new plant virus infecting lettuce and a proposed member of the genus Torradovirus.
Journal	Arch Virol. 2014 Apr;159(4):801-5.
DBLINKS	KEGG BRITE: NC_035214 NC_035219 ICTV: 202302148 ViralZone: family, genus

Scientific Name	Lettuce necrotic yellows virus [TAX:32612]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae; Cytorhabdovirus; Cytorhabdovirus lactucanecante
RefSeq	NC_007642 Lettuce necrotic yellows virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_007642 KEGG GENOME: T40219 ICTV: 202301672 ViralZone: genus, family Descriptions of Plant Viruses: 343, 26

Scientific Name	Lettuce ring necrosis virus [TAX:274495]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Milneviricetes; Serpentovirales; Aspiviridae; Ophiovirus; Ophiovirus lactucae
RefSeq	NC_006051 Lettuce ring necrosis virus RNA 1, complete genome. NC_006052 Lettuce ring necrosis virus RNA 2, complete genome. NC_006053 Lettuce ring necrosis virus RNA 3, complete genome. NC_006054 Lettuce ring necrosis virus RNA 4, complete genome.
Evidence	Literature
Reference	Andret-Link, P., Schmitt-Keichinger, C., Demangeat, G., & Komar, V. (2009). AM Vaira and RG Milne, Istituto di Virologia Vegetale, CNR, Turin, Italy. Desk Encyclopedia of Plant and Fungal Virology, 76, 243.
Comment	The virus is closely associated with lettuce ring necrosis disease.
DBLINKS	KEGG BRITE: NC_006051 NC_006052 NC_006053 NC_006054 ICTV: 202303949 ViralZone: family, genus

Scientific Name	Lettuce secovirus 1 [TAX:2035396]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Sadwavirus; Stramovirus; Sadwavirus lactucae
RefSeq	NC_078766 Lettuce secovirus 1 isolate LSV-1 segment RNA1 polyprotein (QK772_sRNA1gp1) gene, partial cds. NC_078767 Lettuce secovirus 1 isolate LSV-1 segment RNA2 polyprotein (QK772_sRNA2gp1) gene, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_078766 NC_078767 ICTV: 202313823 ViralZone: family, genus

Scientific Name	Lettuce star mosaic virus [TAX:2749300]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Sequivirus; Sequivirus stellatum
RefSeq	NC_076896 Lettuce star mosaic virus isolate JG1-B, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_076896 ICTV: 202313824 ViralZone: family, genus

Scientific Name	Lettuce virus X [TAX:447171]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Alphaflexiviridae; Potexvirus
RefSeq	NC_010832 Lettuce virus X, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_010832 ICTV: 202302207

Scientific Name	Lettuce yellow mottle virus [TAX:471285]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae; Cytorhabdovirus; Cytorhabdovirus lactucamaculante
RefSeq	NC_011532 Lettuce yellow mottle virus, complete genome.
Evidence	Literature
Reference	PMID: 17943394
Authors	Heim F, Lot H, Delecolle B, Bassler A, Krczal G, Wetzel T
Title	Complete nucleotide sequence of a putative new cytorhabdovirus infecting lettuce.
Journal	Arch Virol. 2008;153(1):81-92.
DBLINKS	KEGG BRITE: NC_011532 ICTV: 202301673 ViralZone: genus, family

Scientific Name	Mirafiori lettuce big-vein virus [TAX:200255]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Milneviricetes; Serpentovirales; Aspiviridae; Ophiovirus; Ophiovirus mirafioriense
GenBank	AF525933 Mirafiori lettuce big-vein virus isolate LS301-O putative RNA polymerase and 25K protein genes, complete cds. AF525934 Mirafiori lettuce big-vein virus isolate LS301-O 10K protein and 55K protein genes, complete cds. AF525935 Mirafiori lettuce big-vein virus isolate LS301-O nucleocapsid gene, complete cds. AF525936 Mirafiori lettuce big-vein virus isolate LS301-O 10.6K protein and 37K protein genes, complete cds.
Evidence	Literature
Reference	PMID: 12388823
Authors	van der Wilk F, Dullemans AM, Verbeek M, van den Heuvel JF
Title	Nucleotide sequence and genomic organization of an ophiovirus associated with lettuce big-vein disease.
Journal	J Gen Virol. 2002 Nov;83(Pt 11):2869-77.
DBLINKS	ICTV: 202303950 ViralZone: family, genus

Scientific Name	Pepper chlorotic spot virus [TAX:1414655]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus capsicimaculaflavi
RefSeq	NC_033772 Pepper chlorotic spot virus isolate 14YV733 segment S, complete sequence. NC_033773 Pepper chlorotic spot virus isolate 14YV733 segment M, complete sequence. NC_033774 Pepper chlorotic spot virus isolate 14YV733 segment L, complete sequence.
Evidence	Literature
Reference	PMID: 28526964
Authors	Zheng K, Chen TC, Yeh SD, Rahman MS, Su X, Wu K, Li T, Zhang Z, Dong J
Title	Characterization of a new isolate of pepper chlorotic spot virus from Yunnan province, China.
Journal	Arch Virol. 2017 Sep;162(9):2809-2814.
DBLINKS	KEGG BRITE: NC_033772 NC_033773 NC_033774 ICTV: 202307250 ViralZone: family, genus

Scientific Name	Sonchus yellow net nucleorhabdovirus [TAX:11307]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae; Betanucleorhabdovirus; Betanucleorhabdovirus retesonchi
RefSeq	NC_001615 Sonchus yellow net virus complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001615 ICTV: 202301749 ViralZone: genus, family Plant Viruses Online: 730

Scientific Name	Tomato black ring virus [TAX:12275]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus nigranuli
RefSeq	NC_004439 Tomato black ring virus RNA 1, complete sequence. NC_004440 Tomato black ring virus RNA 2, complete sequence.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004439 NC_004440 ICTV: 202302131 ViralZone: family, genus Descriptions of Plant Viruses: 38

Scientific Name	Turnip yellows virus [TAX:131083]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus
RefSeq	NC_003743 Turnip yellows virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003743 ICTV: 202303790 ViralZone: genus, family

Scientific Name	Varicosavirus lactucae [TAX:1985698]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae; Varicosavirus
RefSeq	NC_011558 Lettuce big-vein associated virus RNA 1, complete genome. NC_011568 Lettuce big-vein associated virus segment 2, complete genome.
Evidence	Literature
Reference	PMID: 11369898
Authors	Sasaya T, Ishikawa K, Koganezawa H
Title	Nucleotide sequence of the coat protein gene of Lettuce big-vein virus.
Journal	J Gen Virol. 2001 Jun;82(Pt 6):1509-15.
Evidence	Literature
Reference	PMID: 12083827
Authors	Sasaya T, Ishikawa K, Koganezawa H
Title	The nucleotide sequence of RNA1 of Lettuce big-vein virus, genus Varicosavirus, reveals its relation to nonsegmented negative-strand RNA viruses.
Journal	Virology. 2002 Jun 5;297(2):289-97.
Evidence	Literature
Reference	PMID: 15302964
Authors	Sasaya T, Kusaba S, Ishikawa K, Koganezawa H
Title	Nucleotide sequence of RNA2 of Lettuce big-vein virus and evidence for a possible transcription termination/initiation strategy similar to that of rhabdoviruses.
Journal	J Gen Virol. 2004 Sep;85(Pt 9):2709-17.
DBLINKS	KEGG BRITE: NC_011558 NC_011568 ICTV: 202301787 ViralZone: genus, family