KEGG   Vitis vinifera (wine grape): 100243826
Entry
100243826         CDS       T01084                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 35B
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100243826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100243826
Membrane trafficking [BR:vvi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    100243826
SSDB
Motif
Pfam: Vps35 CowN
Other DBs
NCBI-GeneID: 100243826
NCBI-ProteinID: XP_002272227
UniProt: F6H1M7
Position
18:complement(join(12660970..12661180,12661289..12661402,12661654..12661757,12661854..12661961,12662046..12662126,12662653..12662721,12663153..12663242,12666030..12666119,12667388..12667477,12667688..12667753,12667864..12668103,12668445..12668561,12682682..12682741,12682810..12682884,12683573..12683695,12683796..12683885,12683977..12684033,12684233..12684320,12686403..12686588,12688077..12688200,12688289..12688385,12688458..12688550))
AA seq 790 aa
MISNIAEDEDKWLAEGIAGIQHNAFYMHRSVDSNNLREVLKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEIFFKDESRHGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APPKDVLKDLVEMCRGIQHPIRGLFLRSYLSQVSRDKLPDIGSDYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQHQGPGRAKEKQEKERSELRDLVGKNLHVLSQIEGIDLEMYKDTVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLME
RLSNYAASSAEVLPDFLQVEAFAKLSSAIGKVIEAQVDMPVFGAITLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGKPKLEDSKATKQIVALLSAPLEKYNDIVTALTLSNYPRVMD
HLDNGTNKIMAMVIIQSIMKNSTCISTADKVEALFELIKGLIKDLDGFPVDELDEEDFKD
EQNSVARLIHMFYNDDPEEMLKIICTVKKHIMTGGLRRLPFTVPPLIFSALRLVRRLQGQ
EGDVVGEEEPATPKKIFQLLNQTIEALSSVPSPELALRLYLQCAEAANDCDLEPVAYEFF
TQAFILYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDGIKDGERVMLCLKRALRIANAAQQMATVARGSSGPVILFVEILN
KYIYFFEKGNSQVTSSAIQGLIELITSEMQSESTTPDPPSDAFFASTMRYIQFQKQKGGA
MGEKYDSIKA
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgatatcgaacatagcagaggacgaggataaatggcttgccgaagggatcgctgggatt
caacacaacgccttttatatgcatcgttctgtggactccaacaatctcagagaagtcctc
aagtactccgctcagatgctgtcggagcttcggacttctagactctctcctcacaaatac
tacgaactctatatgcgagcttttgatgaattgaggaagctggagatattctttaaggac
gaaagcaggcatggttgttctatcattgatctgtatgagctagttcagcatgccggaaac
atattgcctagactgtatctcttatgtacggtaggatctgtatatatcaaatcaaaggag
gctcctcctaaggatgtccttaaagatcttgtggaaatgtgccgtggtattcaacatcct
atacgtggacttttcttaagaagttacctttctcaagtcagtagagataaattacctgac
attggctctgactatgaaggagatgctgacactgtcatggatgctgtagaatttgtacta
cagaacttcacagagatgaataaactttgggttcgcatgcagcatcagggacctggccgg
gcaaaagagaaacaggaaaaggaaagaagtgaacttcgggatcttgttgggaagaatcta
catgttctcagtcagattgagggtattgaccttgaaatgtataaagatactgttcttccc
agggtcttagagcaggtggtcaactgtaaagatgagcttgcacaatattatttgatggat
tgcataattcaggtatttcctgatgagtaccacttgcagacacttgagacgttgttaggt
gcttgcccccaacttcagcctactgttgacatcaagacagtgttgtctcaactaatggag
agattatcaaactatgcagcttcaagtgcagaagtattacctgacttcctgcaagtagaa
gcttttgctaaattgagcagtgccattgggaaggtgatagaagcacaggttgacatgcct
gtttttggagcaataactttatatgtctctcttcttacatttactcttcgtgttcatcct
gatcggcttgattatgtggatcaagtactgggagcatgtgttaagaaactctctggcaag
ccaaagcttgaagatagtaaggcaacaaaacaaattgttgcacttttgagcgccccattg
gagaagtacaatgatattgtcacagccctgacactttctaattatccccgtgttatggac
catctcgataatggaacaaataaaatcatggcaatggttattattcaaagcattatgaaa
aacagtacttgtatttctactgctgacaaggttgaagccttatttgaattaataaaagga
ctgattaaggatttggatggatttcctgtggacgagcttgatgaggaggatttcaaggat
gaacaaaattctgtcgctcgtctcatacacatgttctacaatgatgaccccgaagaaatg
ttgaagattatatgcactgtgaagaagcatattatgactggagggttgaggcgcctacct
tttactgttcctcctcttattttttctgctctcagattggtcaggcgattgcaaggtcag
gaaggtgatgttgttggtgaagaagagcctgcaactcccaaaaaaatatttcaactttta
aatcagactattgaggctctttcatctgttccttcacctgaactggcattaaggttgtac
ctgcaatgtgctgaggctgctaatgactgtgatcttgagcctgttgcttatgaatttttc
actcaggcattcatattgtatgaagaagaaattgcggattccaaagctcaagtgactgca
attcatctaataattgggactctgcagaggatgaatgtttttggtgttgagaatagggat
acattaacgcacaaagccaccgggtattcagcaaagcttttaaagaaacctgatcaatgc
agagcagtttatgcatgttcccatcttttttgggttgacgatcaagatggcattaaggat
ggagaaagggtcatgctttgcctaaagcgtgcattaaggattgccaatgctgctcaacaa
atggccaccgttgcacggggtagcagtggaccggtcatactctttgtggagatactgaac
aagtacatttatttttttgagaaggggaactcacaggtcacaagttcagcaatccagggt
ttgatagaattaattacaagtgagatgcaaagcgagtccactaccccagatccaccttca
gatgctttctttgccagcacaatgcggtacattcagttccagaaacagaaaggtggtgcg
atgggtgagaaatatgattctatcaaagcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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