KEGG   Vitis vinifera (wine grape)

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Genome information

T numberT01084
Org_codevvi
NameVitis vinifera (wine grape)
Annotationyes
TaxonomyTAX: 29760
    LineageEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
BriteKEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: plants [BR:br08613]
Data sourceRefSeq (Assembly: GCF_030704535.1 Complete Genome)
BioProject: 1013121
Original DBGenoscope
KeywordsPhotosynthesis
Chromosome1
    SequenceRS: NC_081805
    Length27822162
Chromosome2
    SequenceRS: NC_081806
    Length20941263
Chromosome3
    SequenceRS: NC_081807
    Length21317290
Chromosome4
    SequenceRS: NC_081808
    Length25934928
Chromosome5
    SequenceRS: NC_081809
    Length26899771
Chromosome7
    SequenceRS: NC_081811
    Length31654362
Chromosome8
    SequenceRS: NC_081812
    Length23763023
Chromosome9
    SequenceRS: NC_081813
    Length24372199
Chromosome10
    SequenceRS: NC_081814
    Length27504061
Chromosome11
    SequenceRS: NC_081815
    Length20048508
Chromosome12
    SequenceRS: NC_081816
    Length24706008
Chromosome13
    SequenceRS: NC_081817
    Length29842242
Chromosome14
    SequenceRS: NC_081818
    Length30475315
Chromosome15
    SequenceRS: NC_081819
    Length23565456
Chromosome16
    SequenceRS: NC_081820
    Length27608946
Chromosome17
    SequenceRS: NC_081821
    Length19942836
Chromosome18
    SequenceRS: NC_081822
    Length36684271
Chromosome19
    SequenceRS: NC_081823
    Length27218600
ChromosomeMT; Circular
    SequenceRS: NC_012119
    Length773279
ChromosomeCP; Circular
    SequenceRS: NC_007957
    Length160928
StatisticsNumber of nucleotides: 471235448
Number of protein genes: 25187
Number of RNA genes: 1238
Created2009
ReferencePMID: 37213686
    AuthorsShi X, Cao S, Wang X, Huang S, Wang Y, Liu Z, Liu W, Leng X, Peng Y, Wang N, et al.
    TitleThe complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding.
    JournalHortic Res 10:uhad061 (2023)
DOI: 10.1093/hr/uhad061
ReferencePMID: 17721507
    AuthorsJaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, et al.
    TitleThe grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
    JournalNature 449:463-7 (2007)
DOI: 10.1038/nature06148
ReferencePMID: 16603088
    AuthorsJansen RK, Kaittanis C, Saski C, Lee SB, Tomkins J, Alverson AJ, Daniell H
    TitlePhylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids.
    JournalBMC Evol Biol 6:32 (2006)
DOI: 10.1186/1471-2148-6-32