KEGG   Vitis vinifera (wine grape): 100246671
Entry
100246671         CDS       T01084                                 
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    100246671
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:vvi04040]
    100246671
Ion channels [BR:vvi04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   100246671
SSDB
Motif
Pfam: Ion_trans cNMP_binding Ion_trans_2 IQ
Other DBs
NCBI-GeneID: 100246671
NCBI-ProteinID: XP_002278464
Position
11:complement(join(8110098..8110820,8111543..8111779,8125997..8126108,8126556..8126860,8127241..8127453,8132031..8132613,8134650..8134708))
AA seq 743 aa
MFDCGHKSQYMGVQREKFVRLDDLDSKLSISSDPGVNRCGFSIDGLSHVGLARSTSSRSL
KKGMRKGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQHKFLQLWNKLFVISCILA
VSVDPLFFYLPVIDSSSKCLGIDRKLAITATTLRTIIDAFYLIHMALQFRTAYIAPSSRV
FGRGELVIDPARIAKRYLRTYFIIDFLAVLPLPQIVVWRFLHSSDGSDVLSTKQALFFIV
LLQYIPRLFRMLPLSSELKRTSGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAVERND
SCWQRACAHSGNCKTDFLYCSNRHTEGYDAWLIDSDNVLNSNCSVEGDNPPFNYGIYTNA
LSSGIVSSKKFLSKYCYCLWWGLQNLSTLGQGLQTSIYPGEVIFSIALAILGLILFALLI
GNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEENL
VQSLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPSLFTENTFIVREGDPV
DEMLFIIRGRLESVTTGGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTVK
ALTEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRK
ILELRRKEEEEEEAAAAAAAEGLSGTNNNVRGGSYSLGATILASRFAANALRGVHRNRIT
KSARELVKLQKPPEPDFSADDAD
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgtttgattgtggtcataagtcacagtacatgggggtccaacgagagaagtttgtaagg
ttggatgacttggactccaaactatcgatttcttctgatccaggagttaatagatgcgga
ttcagtattgacgggttaagccatgttggtcttgcgagaagtacatcatctagatctttg
aagaaaggaatgagaaaaggatctgaaggactaaagtcaattggccgatcacttggattt
ggggtttctcgagcagtattcccagaagatcttaaagtgtcagaaaagaagatatttgac
cctcaacacaaattccttcagttgtggaataaactttttgtcatatcatgtattcttgca
gtatctgtggaccctctgttcttttatcttccagtcattgatagttcatcaaaatgcctt
ggtatagatcgtaagttagcaatcacagcgacaacattgcggacaattattgatgctttc
tatcttatccatatggctctccaattccgaacagcttatattgccccatcatctcgggtt
tttgggcgaggtgaacttgtgatagatcctgcaagaatagctaaacggtatttgcgaacg
tacttcatcattgattttcttgctgtgctgccactaccacagattgtggtctggagattt
cttcatagttcagatggttcagatgtattgtctacaaaacaagctctgttcttcatagtc
ttacttcaatacatccctaggctgtttcgaatgctacccttatcttcagaactgaaaagg
acttctggtgtctttgctgaaactgcttgggctggtgctgcatattatttgcttctgtac
atgcttgctagtcatatagttggggctttctggtacttactagctgtagaacgtaatgat
tcatgctggcagagggcttgtgctcatagcggaaattgcaagacagatttcttgtattgc
agtaacaggcacacggagggttatgatgcctggctcatagacagtgacaatgttcttaat
tcaaattgctctgtagaaggtgacaatccaccatttaattatggaatctataccaacgct
ctgtcatctggcattgtttcatccaagaagttcttatctaaatactgttactgtttgtgg
tggggtctacagaatttaagcacactcgggcaggggcttcaaaccagcatctatcctgga
gaagtaatattctctatagctcttgccatacttggtctcatactctttgcacttctgatt
ggcaacatgcagacctatcttcagtctcttaccatacggcttgaagagatgagggtcaaa
aggcgcgactcagagcagtggatgcatcatcgcttactcccacaagaactcagggaacgg
gttagacgatatgatcaatacaaatggttggaaacacgtggagtagatgaagaaaacttg
gttcaaagtctaccaaaggatctcagaagggatatcaaacgccacctctgtctggctttg
gtgaggagggttcctctatttgagaatatggatgagaggttgctggatgctatttgtgag
cgactgaaaccaagtttattcacagaaaataccttcattgtgcgagaaggagatccagtt
gatgagatgctgtttattatacggggtcgccttgagagcgtaaccactggtggtgggagg
agtggatttttcaaccgcagtttgctgaaagaaggggatttctgtggggaggaacttcta
acttgggcgctggatccaaaatcgggttctaaccttccatcttctacacggacagtgaag
gcccttacagaggtggaggcttttgctctaatagctgaggaattgaaatttgtggccagc
cagttcaggcgcctgcacagtagacaggttcaacacaccttccgtttttactcacagcaa
tggagaacttgggctgcgtgctttatccaagcagcatggcgccggtactccaagaggaag
attctggagcttcggcggaaggaagaagaagaggaagaagcagcagcagctgcggcagca
gaagggctgagcgggaccaacaataatgttcgaggaggctcatatagtctgggagccact
atcttagcttccaggtttgcagcaaatgctctaaggggggttcataggaaccgtatcact
aagagtgctagggaactggtgaagctacagaagcctccagagccagatttctctgctgat
gatgcagattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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