KEGG   Vitis vinifera (wine grape): 100248563
Entry
100248563         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100248563
  KO
K11797  PH-interacting protein
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100248563
Ubiquitin system [BR:vvi04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100248563
SSDB
Motif
Pfam: WD40 Bromodomain NBCH_WD40 Auxin_resp
Other DBs
NCBI-GeneID: 100248563
NCBI-ProteinID: XP_010652239
Position
7:complement(join(4307891..4308086,4308664..4308722,4309322..4309891,4310012..4311946,4312025..4312428,4312538..4312592,4312967..4313026,4313129..4313225,4316543..4316613,4316703..4316783,4321507..4321577,4325469..4325637,4325934..4326012,4326177..4326254,4326335..4326438,4326585..4326715,4326803..4326897,4327134..4327240,4327321..4327398,4327534..4327643,4330072..4330311,4331145..4331299,4332489..4332835))
AA seq 1763 aa
MDFQKCKSSSEAPSLSMVPLSFSNKLHERPQCQERNTDHVVADVDIDLREVYFLIMHFLS
AGPCQKTFGQFWNELLEHELLPRRYHAWYSRSGACSGDENDNGFSFPLGYNNLVERYPHI
GKDHLVKLLKQLMLNTAPPLHGEVGGNAPSAVDVPTLLGTGSFSLLDCHKKKENKQVKPP
PDYLRWPHMQADQVRGLSLREIGGGFTKHHRAPSIRSACYAIAKPSTMVQRMQNMKKLRG
HRDAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNVLVA
SASNDFIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSSVYQLLSSSDDGSCRIWDARF
SQCSPRIYLPKPPDAVAGKNSVPSMNGTSSSNGPQSHQILCCAFNASGTVFVTGSSDTFA
RVWSACKSSTDDSEQPNHEIDVLSGHENDVNYVQFSACAGASRSSVSDTFKEESLPKFKN
SWFCHDNIVTCSRDGSAIIWIPRSRRYHGKVGRWTRAYHLKVPPPPMPPQPPRGGPRQRL
LPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHSASTYVLDVHPFNPR
IAMSAGYDGKTIVWDIWEGIPIRTYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQ
GESQKDAKYDQFFLGDYRPLIRDTIGNVLDQETQLAPHRRNIQDPLCDSSMIPYSEPYQT
MYQQRRLGALGIEWHPSSINLAVGPDFSLGQEYQMPPLADLDRVMEPLPELVDAVYWEPE
NEVISDDTDSEYNIAEEYSSEGEHGSLSAASSFSDPECSAEDTDVEHSHKDGLRRSRRKK
YRSEVEIMTSSGRRVKRRNLNECDGTSSRSRTKKSKNGRKVSKRNSSKIQSLRPQRAAKR
NALNMFSQITETSTEGDDEEGLEDDSSGSDPMIQDSNMQNTKSDRNLQNVQQKYQRGEQS
SLNEFENAIKFPESQSNAGNRRRLVLKFSLRDSKKSIPSEDTRPKCNTQADIVHSPSRPP
PKTVEEKETNLISEDPESSSMHAADLEQSQNHNRDDFIHKPRSEETEDHLDTSAGYKDNK
IRWGEVKARSSKRFRSGDFVASDACTGFDVSFDVHNGNGKDINGQTKPENGCGNSSPSEI
QNHAGELLEKLGRDVEPFGTGLENKDDVKNNELAPPGEANKSSSFQGLSLLDDHQKIDAS
AISSNGNLNKQHKGWSGSDEFRDCDSLEMDETVGINHSHDLKGNPPANSLKLRIRSKRIV
RDPNFPSKLKFVTGTEEPSNIGGDLMSRSHSRMEHNQISEVPEEDKVIEMPSSPHRSHSD
SDKQNYDAVHKRAKSYMARTNAEGYGGSMEESASNAGNYNYDSGIDFHEATTDAVHRTRS
MVRDTTSQEPNNVMSRFKVREETSKNAENYSKKTRDQLQSEEWMSSSRMRVRSRSTRYRR
GDYDNYLSPSAGRISNFSGRKVSWLMLSEHEEGYRYIPQQGDEVVYLRQGHQEYIEKLNL
RSEVGPWRSPKTNIRAVEICSVEDLVYASLAGSGDSCCKITLKFTDPLSSVFGRTFKLTL
PELINFSDFVVEKTRYDAAIGRNWTHRDKCLVWWRNGEDGGGSWWEGRILAVEAKSREFP
DSPWERYVVKYKGDAENNLHSPWELHDPDIQWEQPQIDFEIRDKLLSSFAKLESAHKIQD
YYGIQKFNQVAQKLDFLNRFPVPLYPELIQARLENNYYRTLEAVKHDIMVMLSNAQSYFG
RNAELSSKMKRLSDWFTRTLSKL
NT seq 5292 nt   +upstreamnt  +downstreamnt
atggatttccagaagtgcaaatcttctagtgaggcaccctctcttagtatggtacctttg
agtttttcgaataagttgcatgagaggcctcaatgccaggagagaaatactgatcatgtt
gtggcagatgtagatattgaccttagagaagtttactttttgattatgcattttctatca
gctggcccatgccagaaaacttttggacaattttggaatgagcttttggaacatgagctt
ctacctagaagataccatgcttggtattcaaggagtggagcatgcagtggggatgaaaat
gacaacggcttctcgttcccactaggttacaataatttggtggagaggtatccacacatt
ggaaaggatcacttggtaaagcttctgaagcaactgatgctgaatactgcccctccgttg
catggtgaggttggaggaaatgctccaagcgctgttgatgttcccacactgctcggaact
ggttccttttcacttctggattgtcataagaagaaggaaaataagcaagttaaacctcca
ccagattaccttcgttggccccacatgcaggctgatcaggtccgtggtttgagtttgagg
gagattggtggcggtttcacaaaacaccatcgggctccatctattcgctctgcatgttat
gccattgctaaaccatcaactatggtccaaaggatgcaaaatatgaagaagttaagagga
caccgtgatgctgtctattgtgccatcttcgatcgctcggggagatatgtaattactggt
tctgatgatcgccttgtcaagatttggtcaatggaaactgcattttgtttggccagctgc
cggggacatgaaggtgacattactgacttggctgtaagttcaaacaatgttctggtggca
tctgcttcaaatgacttcatcattcgagtttggcgcttgccagatgggttaccaatctct
gttttgcgggggcatactggagctgtcactgctattgcatttagccccaggcccagctct
gtatatcagcttttatcgtcatcagatgatggaagttgtcggatctgggatgctaggttc
tcccagtgcagtccacggatttacctgccaaagcctccagatgctgtcgctggaaagaac
agtgttccctcaatgaatggaacctcctcaagtaatggtcctcaaagccatcaaatatta
tgttgtgctttcaatgccagtggaactgtttttgtcactggtagctctgatacttttgca
agggtttggagtgcttgtaaatccagcacagatgattcagaacaaccaaatcatgagata
gatgtattatctggccatgaaaatgatgtcaattatgtgcaatttagtgcctgtgctggg
gcttcaaggtcttcagtgtctgacactttcaaggaggaaagccttccaaaatttaaaaat
tcctggttctgtcatgacaacatagtaacttgttctcgtgatggaagtgcaattatttgg
attccaagatcacgcagatatcatggaaaagttggacgttggacacgggcatatcatctc
aaagttcctcctcccccaatgccgcctcaacctcctcgaggaggcccacgacaaagattg
cttccaactcctcgtggtgttaatatgattgtgtggagcctggataatcgctttgtgctt
gctgctatcatggattgcagaatatgtgtttggaatgctgccgatggtagcctagtacat
tctttgactggccacagtgcatctacctatgttttggatgttcatcctttcaaccctcgg
attgctatgagtgctgggtatgatgggaaaaccatagtgtgggatatatgggagggcata
cctatcaggacatatgaaattggacgctttaagttggttgatggaaaattttctccggat
ggaacatcaattgtactttcagatgatgttggtcaaatatatttgctaaatacaggccaa
ggcgagtctcaaaaggatgccaaatatgaccagttctttcttggtgattatcgccccctt
attcgcgacaccattggaaatgttcttgatcaggagacacagcttgctccacatcgaagg
aatattcaagatcctctctgtgattctagtatgattccatattcagaaccttatcagact
atgtaccagcaacgtcggttaggagcactgggtattgagtggcatccttcttccataaac
cttgctgttggaccagatttcagtttaggccaagagtatcaaatgccacccttggcagac
ttggacagagtaatggaaccactaccagagcttgtcgatgctgtgtactgggaaccggaa
aatgaagtcataagtgatgatactgattctgagtacaatattgctgaggaatattctagt
gaaggtgaacatggaagtttaagtgctgcatcttcttttagtgatccagaatgcagtgca
gaagacactgatgttgaacacagtcataaagatggtcttcgtagatctagaaggaaaaaa
tacagatcagaagtggagatcatgacttcttctgggcggcgtgttaaaaggaggaatttg
aatgagtgtgatggcacttcgtccaggagtagaactaagaaatcaaagaatggccggaaa
gtttcaaagagaaattcctctaaaatacagtccctgagacctcagcgagctgctaaacgc
aatgctctgaatatgttctctcaaattactgaaacttctacagaaggagatgatgaagaa
ggtttagaagatgattcatcaggcagtgacccaatgatccaggattcaaacatgcaaaac
actaagtctgacagaaacttgcagaatgtgcaacagaaatatcaaagaggtgaacaatcc
tccttaaatgagtttgagaatgcaatcaagtttcctgaatcccagtctaatgctgggaac
agaaggagattggttcttaagttttcacttcgtgattctaagaagtctattccttcagag
gataccagacccaaatgtaacactcaggctgatatagtgcattcaccttctagaccacct
cctaaaactgttgaagaaaaggaaaccaacttaatctctgaggatccagagtcatcttcc
atgcatgcagctgatttggaacaatctcaaaaccacaacagagatgatttcatacataaa
ccacgatctgaagagactgaggatcatttggatacatctgcgggttacaaggataataaa
atcagatggggagaggtcaaagcacgctcatcaaagcgtttcagatcaggagatttcgtt
gcatcagatgcatgcacaggatttgatgtgagttttgatgttcataatggaaatgggaaa
gatattaatgggcaaactaaacctgagaatggatgtggaaattcttcaccttcagaaatc
caaaatcatgcaggtgagttgttagaaaagttgggcagggatgtggaaccatttggaact
ggattagagaataaggatgatgtaaaaaataatgagcttgctcctcctggagaagcaaat
aaatcttcctcatttcaggggttgtctctgcttgatgaccatcagaaaattgatgcttct
gccatttcttctaacggaaatctcaacaagcaacataaaggttggtctggatcagatgaa
ttcagagattgtgactcactagaaatggatgaaactgttggcataaaccactcccacgat
ctgaaagggaatcctcctgccaactcacttaaattaagaattagatcaaaaaggattgtg
agggaccctaacttcccttccaagctaaagtttgttactggcacagaagagccaagtaat
attggaggtgatttgatgtctagaagccactcaaggatggagcataatcaaatttcagaa
gtaccagaagaggataaagtgattgagatgccaagttctccacataggtcacattcagat
tcagataaacaaaattatgatgctgttcataaaagagcaaaatcatatatggctagaacc
aatgctgaagggtatggtggcagcatggaagaaagtgcttcaaatgctggcaactataat
tatgactcaggaattgattttcatgaagctacaactgatgcagtacatagaacaagatct
atggtgagggatacaacttcacaggagccaaataatgtaatgagtagatttaaagtgagg
gaggagacatcgaagaatgctgagaactattccaagaaaacaagggatcagcttcagtct
gaagaatggatgtccagttcaagaatgagagttagatcaaggtctactagatataggcga
ggtgattatgataattacctgagtccttcagctggaaggatttcaaatttctctggaaga
aaagtttcatggctgatgttgtcagagcatgaagagggttaccgatatattcctcagcaa
ggtgatgaggtggtgtacttgagacagggccatcaggagtacatagaaaaattgaatctg
aggtcagaagtaggtccttggagatcaccgaagacaaacataagagctgttgaaatatgt
tcagttgaagaccttgtttatgcctcgcttgcaggttctggagatagctgctgtaaaatc
acacttaaattcacagatccactgtccagtgtgtttggtagaacattcaaattgactctg
cctgaactgattaatttctctgactttgttgttgagaaaacgcggtatgatgctgcgatt
ggaagaaactggacccatagggataagtgcctggtctggtggaggaatggagaagatggt
ggtggcagttggtgggaaggtcggattcttgctgtagaggccaaatctcgagagttccct
gacagcccttgggaaagatatgttgttaagtacaagggtgatgctgaaaacaatctacat
agtccttgggaacttcatgatcctgatatccaatgggagcaaccccagattgactttgag
atcagagacaagttgctttcttcttttgcgaaattggagtcagctcacaaaattcaggat
tattatgggattcagaaatttaatcaagttgctcagaaattggacttccttaacaggttt
ccagttccattatatcctgaactgatccaggcaaggttagagaacaactattatcggaca
ttagaagcagtgaagcatgacatcatggtaatgttgtcgaacgcccaatcatactttggg
agaaatgcagagctatcgagcaagatgaagcggctgtcagattggttcacaaggacatta
tcaaagttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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