KEGG   Vitis vinifera (wine grape): 100251263
Entry
100251263         CDS       T01084                                 
Name
(RefSeq) oligoribonuclease isoform X1
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100251263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100251263
   03009 Ribosome biogenesis [BR:vvi03009]
    100251263
Messenger RNA biogenesis [BR:vvi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     100251263
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    100251263
SSDB
Motif
Pfam: RNase_T DUF6604 Rv2179c-like
Other DBs
NCBI-GeneID: 100251263
NCBI-ProteinID: XP_002271328
UniProt: D7T1F5
Position
6:complement(join(17083404..17083525,17084336..17084426,17103747..17103833,17107518..17107573,17107734..17107815,17109935..17110011,17125147..17125281,17126515..17126602))
AA seq 245 aa
MEKLSNIFSVLQLDADDDQLHMPDSSSTTDKKEKKGKSSSNLVPSKNEKNCEQDSMIPSE
QYRLPLVWIDLEMTGLNVEVDRILEIACIITDGNLIKSVEGPDLVIHQTKECLDNMGEWC
QSHHSASGLTKKVLRSTISEQEAEKQVIEFVKRNVGTYTPLLAGNSVYMDFLFLKKYMPD
LASLFSHVLVDVSSIKALCIRWYPRDSKKAPSKENKHRAMDDIRESIRELKYYRENIFKA
SKSKK
NT seq 738 nt   +upstreamnt  +downstreamnt
atggaaaagctgtccaatatcttctcggtgctacagcttgacgctgacgatgatcagctt
catatgcccgactcctcttctactacagataagaaggagaagaaaggtaaaagctcgagt
aacttggtgccctcaaaaaatgagaaaaactgtgaacaagattcaatgatcccttcagaa
cagtacaggttaccacttgtgtggattgatttagaaatgactggtctaaatgttgaagtt
gatcgaatactggagattgcttgtataattacagatggcaatttgatcaaatcagttgag
ggtcctgatttggttatccatcaaactaaagagtgtttagacaacatgggagaatggtgt
caaagtcatcactcagctagtgggctgacaaaaaaagtgcttcgaagtaccatcagtgaa
caagaagctgaaaagcaggtcatagaatttgtcaagagaaatgttggtacatacacccct
cttctggcaggaaattcagtttatatggattttctctttttaaagaaatatatgccagat
ttggctagtcttttctctcatgttcttgttgatgttagcagtattaaagctttatgcatc
cgatggtatcctcgagactcgaaaaaggctccttcaaaggaaaataaacacagagccatg
gatgatatcagagaaagcataagggaactcaaatactaccgggagaatatattcaaagca
tccaagtccaagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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