KEGG   Vitis vinifera (wine grape): 100256277
Entry
100256277         CDS       T01084                                 
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100256277
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vvi01007]
    100256277
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvi03016]
    100256277
Enzymes [BR:vvi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     100256277
Amino acid related enzymes [BR:vvi01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   100256277
Transfer RNA biogenesis [BR:vvi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100256277
 Prokaryotic type
    100256277
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon tRNA_SAD RPA_interact_M
Other DBs
NCBI-GeneID: 100256277
NCBI-ProteinID: XP_002270988
Position
12:complement(join(8776578..8776838,8776947..8777147,8777393..8777701,8778211..8778588,8778744..8778997,8779464..8779611,8779739..8779885,8780590..8780925))
AA seq 677 aa
MLLVLHRMAASHSLFASSLKLTSNQLLHHYRCPLKRIVSISGGFSRSRIRVLPLYHKAHG
LSTTSSAVATDSTDSTDSAVLADDKGLGEAPPEKIVLPTNESSERLLRIRHTCAHVMAMA
VQKLFPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLIREEVSRDE
AQRRIMAVNEPYKMEILDSIQEDPITIYHIGGEWWDLCAGPHVEYTGNINRKAVELESVA
GAYWRGDEKKQMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGG
GLVFWHPKGAIVRRIIEDSWKKIHIEHDYDLLYTPHVARADLWKTSGHLDFYRENMYSQI
TIEDELYQLRPMNCPYHILIYKRKLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFT
QDDAHIFCLEDQIKDEIRGVLDLTEEILLQFGFSKYEVNLSTRPEKAVGADDIWEKATSA
LRDALDDKGWSYRIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDS
NSEKQRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVTN
KLKANGIRAEVCHGERLPKLIRNSEKQRIPLMAVVGPKEVETQTVTVRSRFGGELGTMIV
EDFISRTKSATENRTSF
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgttgctagttcttcacagaatggccgcttctcattctctcttcgcctcctctctcaaa
ctcacttcgaaccaacttcttcatcattatcgatgtccgctaaagcgtatcgtttcgatt
tccggaggattcagtcggagccgaatcagggtgctgccgctttatcacaaggcccatgga
ctgtccactacatcttcggccgtggccactgattccactgattccactgattctgcggtt
ttggctgatgacaagggcttgggcgaggctccgcctgaaaaaattgttcttcccaccaat
gaatcgtctgagcgtctcctgaggattcgccatacgtgtgcacatgtaatggctatggct
gttcagaagctcttcccggatgcaaaagtgacaattggtccatggatagaaaatgggttt
tattatgattttgatatggagcctttgacagataaagatttgaagaggatcaagaaagag
atggatcgcatcattggtcgaaatttaccactgattagagaagaagtttccagagatgaa
gctcagagaagaataatggctgtcaatgaaccatataaaatggaaattttggatagcatc
caggaagatcccatcaccatctatcatattggtggtgaatggtgggacctttgtgctggg
cctcatgttgaatatactggaaatattaacaggaaagctgttgaacttgaatctgttgct
ggtgcttactggagaggggatgagaagaaacagatgctgcagagaatctatggcacagca
tgggagaatgaggaacaattgaaagcatatcttcacttcaaagaggaggcaaaacgccgg
gatcacagacgccttggacaagatcttgatctgttctctatacaggatgaagctggtgga
ggtctagtgttctggcatccaaagggtgccattgttaggcgtattatagaagattcatgg
aaaaaaatacatatagaacatgactatgatctgctgtatactccacatgttgctagggct
gatttatggaagaccagtggccatttggatttctacagagagaatatgtacagtcagata
acaattgaggatgaactctatcaactccgaccaatgaactgtccataccatattttgatt
tacaagaggaagctacactcctatcgagatttcccaatcagggttgcagagctgggaaca
gtgtacagatatgagctatccggaagcttgcatggcctttttcgtgtaagaggtttcaca
caggatgatgcacatatattttgcttagaagatcaaatcaaggatgaaatccggggagtc
cttgatctcactgaagaaatattactacaatttggttttagcaagtatgaggtgaacctc
tcaaccaggccagagaaagctgtgggagctgatgatatatgggaaaaagcaacatcagca
cttagagatgctttggatgataaggggtggagctatcgaattgatgaaggtggtggtgcc
ttttatggtcctaagattgatctcaagattgaggatgctcttggaaggaagtggcagtgc
tcaactatacaggttgatttcaatttgccacagcgatttgacattacatatgttgactca
aactcagaaaagcaacgacccatcatgatccatagagctgttcttggatccttggagcga
ttctttggagttctcatagagcattatgctggggattttccactatggctttctccaatc
caagctcgggttttaccagtgacggacacacagcttgagtactgcaatgaggtgaccaac
aaactgaaagctaatggtattcgggctgaagtttgtcatggtgagcgccttcctaagctc
attagaaattctgagaagcagagaatcccattaatggcagttgtgggccccaaagaagtt
gaaacacaaacagttacagttagatctaggtttggcggggagcttggaaccatgatagtt
gaagattttatcagcagaaccaagtctgctacagaaaacagaacatcattttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system