KEGG   Vitis vinifera (wine grape): 100264308
Entry
100264308         CDS       T01084                                 
Name
(RefSeq) endoribonuclease Dicer homolog 1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100264308
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    100264308
   microRNA pathway
    RISC loading complex
     100264308
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer dsrm PAZ DND1_DSRM DEAD Helicase_C ResIII Dicer_dsRBD Dicer_PBD SNF2-rel_dom Piwi
Other DBs
NCBI-GeneID: 100264308
NCBI-ProteinID: XP_010661522
Position
15:join(19579020..19580141,19580229..19580342,19583969..19584179,19584358..19584752,19584851..19585082,19585420..19585592,19585705..19585827,19585908..19586068,19586213..19586446,19586573..19586723,19586806..19586988,19588479..19588640,19588717..19588812,19588921..19589549,19589934..19590034,19590139..19590338,19590420..19591340,19591420..19591584,19591709..19592082,19592212..19592389)
AA seq 1974 aa
MEGEMMNKGVSGSEAYWLDACEDIPCDLDFPEFESNIVSESADAPSNPDGVGDFFGGIDR
ILDSIKNGTGLTPVVDEGTTGIPDCAVSQTWFQTENVAVGASNLQLHHSFGVSDVSPNDT
NGTKRRSDDDGCQFHEADNGKMSLDGKAESKLVHSPKGNGVKKHENRPNDASRDRDFDDQ
ERYSKRARLGDSKNDRHYSTRGQYQPRERSSCRKRSRNWEEFDRRDGDQIRRKEHYGSRR
ESRDREWRDREAKGYWERDRLGSKEMIFHLGSWEAERNREGKMGAEKNQECNGSVTERRL
EEPKEKLPEEQARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKL
LAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKHVLVMTAQI
LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVN
LKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATLWSLHEQ
IKQMELAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI
NYALGELGQWCAFKVAQSFLTALQNDERANYQLDVKFQESYLNKVVSLLQCQLSEGAVSD
KDKKVVDTETSVSVDGSAIEEIEEGELPNSHVVSGGEHVDVIIGAAVADGKVTPKVQSLV
KILLKYQQTEDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLIGHNNSQEMRTCQMQ
DTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL
MVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKGTSRLISVDTTPGTVYQVESTGA
IVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLE
GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARH
REFYPEGVANVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLF
GNELDAEVLSISMDLFIARTMVTKASLVFWGPIDITESQLASLKSFHVRLMSIVLDVDVE
PSTTPWDPAKAYLFVPVVGDKSEDPIRQIDWDIVERIIRTDGWSNPLQRARPDVYLGTNE
RTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQYDVVRASGLVPNRETIEMMKGED
LTKGKLMMAGTQTSAEDLVGRIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYS
SYADYYRQKYGVELIYKQQPLIRGRGVSYCKNLLSPRFEHSEAHEGESDETLDKTYYVFL
PPELCFVHPLPGSLVRSAQRLPSIMRRVESMLLAVQLKDVINYPVPAAKILEALTAASCQ
ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQS
YIQADRFAPSRWAAPGVLPVFDEDTKETESSLFDHERPFSETAPGNDRHGDGYDDDEMED
GELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQVEFDPEDIVCAT
GPCNVPESILRSVNFDTLEGALNIKFNNRGLLIEAITHASRPSSGVSCYQRLEFVGDAVL
DHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHIHLRHGSSALEKQIRDF
VKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPM
VTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQIGIAQNPQKKMAQK
LAARNALVVLKERETAEAKEGDDENGKKKKNGSQTFTRQTLNDICLRRNWPMPVYRCVNE
GGPAHAKRFTFAVRVNTNDKGWTDECIGEPMPSVKKAKDSAAVLLLELLNKWYT
NT seq 5925 nt   +upstreamnt  +downstreamnt
atggaaggtgagatgatgaataagggggtgtcggggagcgaagcttactggcttgatgcc
tgtgaggacattccctgcgaccttgatttccctgagtttgaaagtaatattgtttctgaa
tcggcggatgctccttccaatccggacggcgtgggtgatttctttggaggaattgatcgc
attcttgacagtataaaaaatggcaccggcctcactcctgttgttgatgaaggcacgact
ggaattcctgattgcgccgtttcccagacctggtttcagactgagaatgtcgcagttggg
gcttccaatttgcaacttcatcactcatttggtgtatctgatgtgtccccaaatgacact
aatggcactaaaaggcggtctgatgatgatgggtgccagtttcatgaagctgataatggg
aaaatgtcattggatggtaaagcagaatcgaaattggttcattctcccaagggaaatgga
gtaaaaaagcatgaaaatcggcctaatgatgcctcaagggatcgggattttgatgaccaa
gaaaggtatagcaaaagggctcgacttggtgactcaaagaatgataggcattattcaacc
agagggcaatatcaacccagggaaaggtcctcttgcaggaagagaagtcgcaattgggag
gagtttgatcggagagatggggatcaaattaggagaaaagaacattacggtagcaggagg
gaaagtagagacagggagtggagggacagagaagccaagggttattgggagagggatcgg
ttagggtctaaagagatgatttttcacctgggttcttgggaagctgaaaggaatagagaa
ggcaagatgggagcggagaaaaaccaggaatgcaatggaagtgtgacagagaggagactc
gaggagcctaaggagaaacttcctgaagagcaagcccgacagtatcaactggatgttctt
gaacaagcaaagaagagaaatacaatagcttttcttgagacaggggccgggaaaacgctt
attgctgtccttctcatcagaagtgttttcaatgatttgcaaggacaaaacaagaaattg
cttgctgtctttttggtaccaaaagttccacttgtttatcagcaagcagaagttattcga
gagcgaactggttaccaggtgggtcattactgtggtgaaatgggtcaagatttctgggat
gctcgaaggtggcagcgcgagtttgaaacaaaacatgttttagtgatgacagctcaaatt
ctgctgaacattctgaggcatagcataataaaaatggaagcgattaatcttctcattctg
gatgagtgtcatcatgcagtgaagaaacatccttattccttagtgatgtcggagttctat
catacaactccgaaggagaagaggccatctgtttttgggatgactgcttctcctgttaac
ttgaaaggtgtttccagccaagtggattgtgcaataaagattcgtaatcttgaaagcaaa
ctagattccatagtttgtacaataaaagaccgcaaagagttggaaaaacatgtgccaatg
ccctcagaaattgtggttgagtatgacaaagctgccaccttgtggtcccttcatgaacaa
ataaaacaaatggaactagcagttgaggaagctgctcaatctagttctaggagaagtaaa
tggcaatttatgggagccagagatgctggggcaaaggaagagctgcgccaagtttatggt
gtttctgaaagaaccgagagtgatggggctgctaatttgattcaaaagttgagggccatt
aactatgcacttggtgaactgggacagtggtgtgcgttcaaggttgctcaatctttcttg
acagctttacaaaatgatgagagggcaaactaccagcttgatgtcaagtttcaagaatcc
tacttgaataaagttgtatctctcttacaatgccaattatcagagggagctgtttctgac
aaggataaaaaagtagtggacactgagactagtgttagtgtggatgggagtgctattgaa
gagattgaggagggagagctgcctaacagtcatgttgtctctggtggagagcatgtggat
gtaataattggggctgccgtggcggatggaaaagtgactccaaaagtgcagtcactggtt
aaaatacttctgaagtatcaacagacagaggatttccgtgcaatcatctttgttgagcga
gtggtggctgcattggttcttcctaaggtttttgcagagcttccttctctaagttttatt
aagtgtgctagcctgattgggcacaataacagtcaggaaatgaggacttgccagatgcag
gacacgattgccaaattccgagatggacgtgtgacattattagttgccactagtgttgcc
gaggaaggacttgatattcggcaatgcaatgttgttattcgatttgaccttgcaaaaact
gtcttagcatacatccaatctaggggccgtgcaagaaagcctgggtctgattacatcttg
atggttgagaggggaaatttgtcacatggagcatttttgaggaatgctaggaatagtgag
gagaccttgcgaaaggaggcaattgagagaactgaccttagtcatcttaagggtacatca
aggttaatttcagtggatacaacaccaggtactgtctaccaggtggagtccactggtgct
attgtaagtttaaattctgctgttggacttatccatttctattgctctcagctacccagt
gacaggtattcaatacttcgtcctgagtttattatggagcggcatgagaaaccaggaggt
cctactgaatattcatgcaagcttcaactgccctgtaatgcaccatttgaaaaacttgag
ggtccagtatgcagttcaatgcgccttgcacaacaggctgtttgtttggctgcttgtaag
aagcttcatgagatgggggcatttactgacatgctcttgccagacaagggaagtggggaa
gaaggagaaaaggttgaccagaatgatgaaggagatccacttcctgggactgctaggcat
agggagttctatcctgaaggtgtggctaatgttctccagggagaatggattttattgggg
aaggatggttgcaacagctccagattggttcatttgtatatgtatgcagttaaatgtgta
aatttcggctcctcaaaagatccattcttaactcaagtttcagattttgtagtacttttc
ggcaatgagctggatgcagaggtgttatcgatctcgatggatctctttattgctcgaacc
atggtaacaaaggcatctcttgtcttctggggaccaatagatattacagagagtcagttg
gcatcccttaagagttttcatgtaagattgatgagcattgtactggatgtggatgttgag
ccttccaccactccatgggatccagcaaaagcatatttgtttgtccctgtggttggcgat
aagtccgaagatcctataagacaaattgattgggatattgttgaaagaataatcaggaca
gatggatggagcaatccccttcaaagagctcggccagatgtttaccttggcacaaatgag
cggacactaggtggagaccgaagggagtatggatttgggaaattgcgacatggcatggct
tttggacagaagtctcatcccacctatggtatcagaggagctgtagctcagtatgatgtc
gtgagagcttctggattggttccaaatcgggaaaccattgaaatgatgaagggtgaggat
ttgaccaaaggcaagctgatgatggctggtactcagaccagtgcagaagatctggtgggg
cgaattgtaacggctgcacactcaggaaagaggttttatgtggattctgtacggtatgat
atgacagcagagaactcattcccgaggaaagaaggttatcttggtcctttggagtacagc
tcatatgctgactactataggcagaaatacggtgtcgaattgatttataagcaacaacct
ctgataagaggacggggtgtttcatactgtaagaatctcctgtcccctcggtttgaacac
tcagaagcacatgaaggcgaatctgatgagactcttgacaaaacatactatgtattcctc
ccacctgagctgtgttttgtacatccacttcctggatcacttgttcgaagtgcccagaga
ttgccctcaataatgaggagggttgaaagtatgctgcttgcggtccagctaaaagatgta
attaattatcctgttcctgctgcaaagatcttggaagccttgactgctgcttcatgtcaa
gagacattctgctatgaaagagcagaacttctgggagatgcttacctgaagtgggttgtt
agtcgatttctatttcttaagtacccccagaaacacgagggacagctcactaggatgcga
caacaaatggtgagtaatatggtcctttatcagtctgcattgtgtaaaggacttcaatca
tacatccaagcagatcgctttgctccgtctagatgggctgctcctggggtgcttcctgtc
tttgatgaagataccaaagagacagaatcatccttatttgaccatgaaagaccattttct
gagactgcaccaggcaatgatcgtcatggtgatggatatgatgatgatgaaatggaagat
ggtgagcttgagagtgattcaagttcttatagggtcctctctagcaagacacttgcagat
gtagttgaagctctgattggagtttattatgttgaaggtgggaagaatgctgctaaccac
ctcatgaaatggattgggatccaagtagagtttgatcctgaggatatagtgtgcgcaact
gggccatgcaatgttccagagagcatactcaggagtgttaactttgatactttagaaggt
gccttaaacattaagtttaacaacagaggcctgttaatagaagccattactcatgcttca
cggccatcttctggagtctcctgttatcagcggttggagtttgttggagatgcagtcttg
gatcatctcattacaaggcacttgttcttcacatacacagacctgcccccaggccggttg
accgacttgcgggctgctgccgtaaacaatgaaaactttgctcgtgtcgcagttaaacat
aagctccacattcaccttcggcatgggtcgagtgcccttgaaaaacagattcgggacttt
gtgaaggaagttcaagatgaattatcaaaaccagggttcaactcctttggtttgggagat
tgcaaagctccaaaagttcttggtgatattgttgaatctattgctggtgctattttcctc
gacagtggacgtgatactgctgtggtctggaaggttttccaacctttgttgcatccaatg
gttactccagaaacactcccaatgcatcctgtgagggagctgcaagaaagatgccaacaa
caggctgagggcttggagtacaaagccactcgaagtggcaatttggctactgttgaagta
ttcattgatggtgtccagattgggattgctcagaatccacagaagaagatggcacagaaa
ctagctgctagaaatgctcttgttgttttaaaagaaagggaaacagctgaagctaaggag
ggtgatgatgagaatgggaagaaaaagaagaatggtagccaaacatttacaagacaaaca
ttgaatgatatctgcttgcgaagaaattggcccatgccagtctaccggtgtgtgaatgag
ggcggtcctgcacatgccaagagatttacatttgctgtgagggtgaatacaaatgataag
ggatggacggatgaatgcataggagagccaatgcccagtgtgaagaaggccaaggactct
gctgcggttctgcttttggaacttctaaataaatggtacacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (13)   
   Pfam (13)   
All databases (50)   

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