KEGG   Vitis vinifera (wine grape): 100266816
Entry
100266816         CDS       T01084                                 
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
vvi  Vitis vinifera (wine grape)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DRMBL DNA_ligase_A_C RMMBL
Other DBs
NCBI-GeneID: 100266816
NCBI-ProteinID: XP_002266168
Position
14:join(19388289..19390722,19390840..19390957,19391109..19391190,19395461..19395563,19395666..19395762,19396515..19396617,19412638..19412766,19413059..19413106,19427963..19428060,19428158..19428223,19443609..19443768,19449354..19449461,19461649..19461698,19464472..19464506,19464592..19464653,19464725..19464883,19464983..19465071,19465560..19465659,19466426..19466734)
AA seq 1449 aa
MVRTVGDALAPSNLPTPNLCKHPPPLQLPETPMAAPQSSSSETMTLDSAHLFLNSHKSLS
QHQSPQPPPPPSLSFLSNHSPLPPIPTNFPQSKLIPKSRFVVDGFRCSGDYSVTYFLSHF
HSDHYSGLSPKWSNGIIFCSNTTARLLVEVLGVSSLFVYPLAVSQPVLIDGCEVALLDAN
HCPGAVQFLFKVPGVDGRFERYVHTGDFRFCESMKLEPCLGEFVGSEAVFLDTTYCNPKF
VFPSQDESVDYIVEAIERIGLENKGLMKSVLFLVATYVIGKERILLEISRRRNCKIHVDG
RKMSVLRVLGYEDGGVFTEDESKSDVHVVGWNVLGETWPYFRPNFVKMKEIMIERGYSKV
VGFVPTGWTYEVKRNKFAMRTKDSFEIHLVPYSEHSNYDELREYVKFLRPKRVIPTVGLD
IEKLDSKHANAMRKHFAGLVDEMAIKHEFLKGFQRGCLEADENVENNTRTVLNKELDAEK
HVTFSKRKTKESTESGFLAVSSSSMQEPGSRDSTLLNDKGSEEVIQELRDCLPIWVTQNQ
MLDLLSCSDGNVIEAVSNFYERETEFREQVIGHTNSVCTSQTSSLKDSVSLSKLGSVGSS
PQKMEDIHGSQSYSLLNIRSSMKSSSLSSGKRKKNLDKKSIKKGKVGSKPESGGSKQSTI
TRFFSKIASNDSQSGDGISEQLSDNENSFPSEAITSYEEQVEQFIKIVNVDESSRYYVSS
ILKKTKGDINMALDIYYSKPEGNLGENEERLVVSSKSIQPECCIQSCSSELEKKVSEKES
GNIVEAKGLSRDTIAATLVSLPLEKYSPIEHACWKLGQPAPYLHLARTFDLVEGEKGKIK
AASMLCNMFRSLLALSPEDVIPAVYLCTNKIAADHENMELNIGGSIVTSAMEEACGTSRS
KIRAMYNSLGDLGDVAQVCRQTQSFLAPPSPLLIKDVFSMLRNISVQTGSGSIVRKKSLI
LNLMRSCREKEIKFLVRTLVRNLRIGAMMRTVLPALAQAVVLHSSPNFYHKGTTENIKEK
LQCLSAAVVEAYNILPNLDLLIPSLLDKGIGFSSSSLSMVPGIPIKPMLAKITNGVPQAL
KLFQNKAFTCEYKYDGQRAQIHKLVDGSVRIFSRNGDETTSRFPDLVSVVRESCKPDALT
FILDAEVVAIDRKNGSKLMSFQELSSRERGSKDSLITLDSIKVDICVFVFDIMFANGKQL
LDIPLRQRRKYLKDLFNNQKLGYFEYAEETTVEADDASTNEATLTKINLFLEEAFRSSCE
GIMIKSLDIDAGYSPSKRTDTWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLM
ACYNPDTEEFQSVCRVMSGFSDNFYKEMKEFFNEDKILSKKPPYYQTAELPDMWFTPELI
WEIRGADFTVSPVHQAAIGLVHPSRGISVRFPRFIRPIMDRRPEECSTAADIADMFHFQT
RKMDVTHHN
NT seq 4350 nt   +upstreamnt  +downstreamnt
atggtacggacagtgggcgatgctttggcgccatccaacctccccactccgaacctctgt
aagcacccaccaccgcttcaactgccagaaaccccaatggcggctccccaatcttcctcc
tccgaaaccatgacgttagattccgctcacctttttctcaactcccacaaatcactctct
caacaccaatctccccaaccccctccacctccctccctctcttttctctccaatcactcc
cctctccccccaatccccaccaattttcctcagtccaagctcattcccaaatcccggttc
gttgtcgatgggtttcggtgctccggcgactactccgtcacctacttcctctctcacttc
cactccgatcactattccgggctcagccctaagtggtccaatggtattatattctgttca
aatacaactgcacgccttctcgttgaagtgcttggggtctcttctttgtttgtttatcct
ttggcggtgtcccaacccgttttgattgatggatgtgaagtggcgcttctcgatgcaaat
cactgccccggagcggtgcaatttttgttcaaggttcctggtgtggatggtaggtttgaa
aggtatgttcatactggtgattttaggttttgtgaatcgatgaaattggagccttgtttg
ggtgaatttgttggttctgaagcggtttttttggatacgacctattgtaatccaaagttt
gtatttccgtctcaagatgaatctgttgattatatagttgaggcgatagagagaattggc
cttgagaacaagggtttgatgaagtctgttttgtttcttgtagctacttatgttattgga
aaagagaggatattgcttgaaatatcaagaaggcgtaactgtaaaatacatgtagatggt
agaaaaatgtcggtgttgcgagttttagggtatgaggatggtggggtatttacagaggat
gagtctaagagtgatgttcatgttgttggatggaatgtattgggtgagacttggccttat
tttagacccaattttgtgaagatgaaggagattatgattgaaagagggtactcaaaagtt
gtgggctttgttcctacagggtggacgtatgaagtaaagcgcaacaagtttgccatgagg
actaaggattcatttgagatccatcttgtaccatacagtgaacattcaaactatgatgag
ctcagagaatatgttaaatttttgagaccaaagcgtgttattcctacagtaggattggac
attgagaaacttgacagtaaacatgctaatgccatgagaaagcattttgctggtttggtt
gatgaaatggccatcaagcatgaattcttgaagggttttcaacgtgggtgcctggaagca
gatgaaaatgttgaaaataatacgagaactgtcctgaacaaggagctggatgcagagaaa
catgtgactttttccaaaaggaaaacgaaagaaagtacagaatcaggatttcttgcagta
tcttcatcttctatgcaagaacctggttcacgagattcaactttgctgaatgataaagga
tcagaggaagtcatacaagaacttcgtgattgcttgcccatctgggtcactcaaaaccag
atgttagatctccttagctgctcagatggaaatgtcattgaagcagtttctaatttctat
gagcgtgaaactgaatttcgtgagcaggtcattgggcatacaaattctgtatgtacatct
cagacaagctcactcaaagattctgtgtcactatctaaactgggttctgtggggagcagc
cctcagaaaatggaggatattcatggtagccaaagctacagtttactcaacattaggagt
tccatgaagagcagcagtctctcttctgggaaaaggaagaaaaaccttgacaaaaagtca
attaagaaaggaaaagttggttcaaaaccagaatctggtggctcaaaacaatctacaata
acaaggttcttcagtaagatagcgagtaatgattctcaaagtggggatggtatatctgaa
caactttctgataatgaaaattcatttccaagtgaggctatcacatcttatgaagaacag
gttgagcagttcattaagatagtaaatgttgatgaatcgtcaagatactatgtttcctcc
atcctgaagaagacgaaaggagatattaatatggctctggacatatactatagtaaacct
gagggtaaccttggtgagaatgaagagaggttggtggtcagtagcaaatcgattcaacct
gaatgctgtatccaaagttgcagttctgagctagagaaaaaagtatcagagaaggaatca
ggaaatatagttgaagctaaggggctatcaagagatactatagctgcaactcttgtatca
ttaccgctggaaaaatattctccaatagagcacgcatgctggaagcttgggcagcctgcc
ccatatttacatcttgctcggacttttgacctggttgagggtgagaagggcaagataaaa
gcagcttctatgctgtgcaatatgtttagaagtttgttggccttgtctcctgaggatgtg
atacctgctgtatatctctgcacaaataagattgctgctgaccatgaaaatatggaacta
aatattggtggaagtatagtcacatctgcaatggaagaggcatgtgggacaagcaggtct
aaaataagggccatgtacaatagcttaggtgatcttggtgatgttgctcaagtatgccga
caaacacagtcattccttgcccctccttcaccgctactaattaaagatgtgttttccatg
ctccgaaatataagtgtacaaacaggcagtggaagtattgttcgaaagaaaagccttatt
ttgaatctcatgcggtcctgtagagagaaggaaataaagtttcttgttagaactttggtt
aggaatttacgaattggggcaatgatgagaactgttctgcctgcattggctcaagctgtt
gtcctgcattcctctcctaacttttatcataaaggaacaacagaaaacataaaggagaag
cttcagtgtctttctgcagcagttgttgaagcatataatatacttcccaatttggatttg
ctcattccttctctcctggacaaaggcattggattttcttcatcaagtttgtctatggtt
ccaggaatacctattaagccaatgcttgcaaaaatcaccaatggagtccctcaagcttta
aagctcttccaaaataaagcttttacatgtgaatataaatatgatggtcagcgcgcccaa
attcacaaactagttgatggatcggtgcgtatcttttcaagaaatggggatgaaacgaca
tcaaggtttccagatttggttagtgtggtcagggaatcatgtaagcctgatgcattgact
ttcatactggatgctgaggtagttgcaattgatagaaagaatggcagcaagctcatgtcc
ttccaggaattatcttcacgagagagaggaagcaaagattccttgatcacattggatagc
ataaaggttgacatttgtgtctttgtctttgatatcatgtttgctaatggaaaacagctt
ttggatattcctctgcgtcaaagaagaaaatatttgaaggatttgtttaacaaccagaaa
ttgggttattttgaatatgcagaggaaacaacagtggaagcagatgatgcttcaaccaat
gaagccacattgactaaaataaatttgtttcttgaagaagcatttcgctcctcatgtgaa
ggaattatgattaaatctctagatattgatgctggatattctccatctaagcgtactgac
acatggttaaaggtcaagcgagattatgtggaaggattgaatgactcacttgatttagtc
ccaatcggtgcttggcatggcaatgggagaaaagcaggctggtatagtccattcctcatg
gcttgttacaaccctgacacagaggaattccaaagtgtatgtcgtgtcatgtcagggttc
tcagataatttctacaaagagatgaaagagttctttaatgaagacaagatattatccaaa
aagccaccttattatcagacagctgagctgcccgatatgtggtttactccagaacttatt
tgggaaataagaggggcagacttcactgtgtctccagttcatcaggcagccataggttta
gttcatccatcccgtggcatctcagtacgatttccaaggttcattcgacctataatggat
agaagaccagaggaatgtagcacagctgcagatatagctgatatgtttcattttcagacc
agaaagatggatgtaacacaccataattga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (53)   

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