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  Transcription Machinery - Cryptosporidium parvum

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AEukaryotic type B RNA polymerase II system C RNA polymerase II D Core subunits E cgd3_2620 DNA-directed RNA polymerase,possible RNA polymerase A/beta'/A'' subunit, long PHYSPTS repeat K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] E cgd7_3720 RNA polymerase beta subunit K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] E cgd1_2710 RNA polymerase II B3 subunit K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 E cgd7_4370 RNA polymerase II K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 D Pol II specific subunits E cgd3_4320 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 E cgd2_2970 DNA-directed RNA polymerase II K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E cgd3_1870 DNA-directed RNA polymerase 2 subunit K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 D Pol I, II, III common subunits E cgd2_980 DNA-directed RNA polymerase 2 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E cgd7_4770 DNA-directed RNA polymerase subunit K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E cgd1_2260 RNA polymerase II B8 subunit K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E cgd7_3240 transcription activator K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E cgd4_3260 DNA-directed RNA polymerases I, II, and III 8.3 kda polypeptide K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 D Pol IV and V specific subunits C Basal transcription factors D TFIIA E cgd5_4200 transcription initiation factor IIA K03123 TFIIA2; transcription initiation factor TFIIA small subunit D TFIIB E cgd8_880 transcription initiation factor TFIIB Sua7p; ZnR+2cyclins K03124 TFIIB; transcription initiation factor TFIIB D TFIID E cgd8_2030 TATA-box factor binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein E cgd4_650 ZnKn (C2HC)+Athook+bromo domain protein, Taf250, transcription initiation factor IID K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] E cgd1_2600 transcription factor TAF5p, TBP associated protein involved in transcription K03130 TAF5; transcription initiation factor TFIID subunit 5 D TFIIE D TFIIF D TFIIH E cgd3_3110 transcription factor TFIIH with a vWA domain K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E cgd6_5040 transcription factor K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E cgd2_2060 possible transcription factor TFIIH K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E cgd8_1940 RAD25, helicase involved in DNA repair K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E cgd7_820 RAD3'DEXDc+HELICc protein' K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E cgd7_430 cyclin-dependent kinase-related kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E cgd1_3300 ring domain protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1 E cgd1_3310 cyclin domain protein, possible cyclin H K06634 CCNH; cyclin H C Mediator complex D Head E cgd5_2520 hypothetical protein K15128 MED6; mediator of RNA polymerase II transcription subunit 6 D Middle E cgd1_2800 hypothetical protein K15148 MED7; mediator of RNA polymerase II transcription subunit 7 E cgd3_3300 SOH1 family protein K15153 MED31; mediator of RNA polymerase II transcription subunit 31 D Tail D CDK-module E cgd2_3890 Ser/Thr protein kinase K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] D Other mediators C Coactivators D SAGA/TFTC/STAGA complex E cgd3_3190 GCN5 like acetylase + bromodomain K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] E cgd6_1740 Tra1p-like; C-terminal FAT domain plus phoshoinositide 3-kinase domain; very large protein K08874 TRRAP; transformation/transcription domain-associated protein E cgd4_880 ADA2 ortholog with a ZZ finger, SANT domain and a SWIRM domain K11314 TADA2A; transcriptional adapter 2-alpha E cgd1_2600 transcription factor TAF5p, TBP associated protein involved in transcription K03130 TAF5; transcription initiation factor TFIID subunit 5 E cgd1_3670 CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX) K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] E cgd8_4340 ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase fold K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] E cgd8_4240 possible spliceosome factor K12830 SF3B3; splicing factor 3B subunit 3 D BAF/PBAF complex E cgd8_2300 brahma like protein with a HSA domain, SNF2 like helicase and a bromo domain K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] E cgd2_3700 SWI/SNF related transcriptional regulator ATpase K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] E cgd2_1740 RSC8 ortholog with a swirm domain, ZZ finger and Myb K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C E cgd3_840 RSC6/BAF60A ortholog with a SWIB domain K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D E cgd8_2200 BRG1/brm-associated factor 53A like actin K11340 ACTL6A; actin-like protein 6A D SWI/SNF complex D RSC complex D Others C Other transcription-related factors D Transcription elongation factors E cgd8_4400 transcription elongation factor TFIIS K03145 TFIIS; transcription elongation factor S-II E cgd2_2820 transcription factor K15171 SUPT4H1; transcription elongation factor SPT4 E cgd6_4650 5kows transcription initiation protein SPT5 K15172 SUPT5H; transcription elongation factor SPT5 E cgd6_5250 transcription elongation factor, SPT6-like K11292 SUPT6H; transcription elongation factor SPT6 D Transcription termination factor E cgd8_460 cleavage and polyadenylation specifity factor protein, CPSF metallobeta-lactamase K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E cgd6_1730 cleavage and polyadenylation specificity factor 4-like; 3x Zn C3H1 domains K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E cgd5_1070 CCCH RNA binding domain involved in RNA metabolism K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E cgd7_2670 serine/threonine protein phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E cgd8_2250 Rat1 Kar1/Rat1 like 5'-3' exonuclease K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D PAF1 complex E cgd4_2010 hypothetical protein K15175 CDC73; parafibromin E cgd5_3010 hypothetical protein K15178 RTF1; RNA polymerase-associated protein RTF1 D NELF complex D Super elongation complex (SEC) D Little elongation complex (LEC) D Brd4/P-TEFb complex D BUR kinase complex D CTDK-I complex D 7SK RNP complex D DBIRD complex D Others E cgd8_4810 RNA pol II carboxy terminal domain phosphatase of the HAD superfamily with a BRCT domain at the C-terminus K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] E cgd7_4250 RNA pol II carboxy terminal domain phosphatase of the HAD superfamily with a BRCT domain at the C-terminus K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] E cgd2_3810 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] E cgd5_1150 iwsip-like protein K17498 SPN1; transcription factor SPN1 E cgd3_3390 hypothetical protein K20826 RPAP1; RNA polymerase II-associated protein 1 E cgd5_1900 XPA binding protein 1 K24104 GPN; GPN-loop GTPase E cgd6_4270 MinD type ATpase K24104 GPN; GPN-loop GTPase E cgd7_80 XPA1 binding protein-like GTpase K24104 GPN; GPN-loop GTPase B RNA polymerase III system C RNA polymerase III D Core subunits E cgd6_3290 DNA-directed RNA polymerase III C1 subunit K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] E cgd8_170 DNA-directed RNA polymerase beta subunit K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] E cgd8_300 RNA polymerase III C5 subunit K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 E cgd4_3200 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 D Pol III specific subunits E cgd6_4580 RNA polymerase III C34 subunit; rpc34p ortholog K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 E cgd1_1960 RPB7 subunit of the RNA polymerase III, OB fold K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 E cgd7_510 RNA polymerase III subunit C11 K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 E cgd7_505 hypothetical protein K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 D Pol I, II, III common subunits E cgd2_980 DNA-directed RNA polymerase 2 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E cgd7_4770 DNA-directed RNA polymerase subunit K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E cgd1_2260 RNA polymerase II B8 subunit K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E cgd7_3240 transcription activator K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E cgd4_3260 DNA-directed RNA polymerases I, II, and III 8.3 kda polypeptide K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 C Basal transcription factors D TFIIIA E cgd2_1150 hypothetical protein K09191 GTF3A; general transcription factor IIIA D TFIIIB E cgd8_2030 TATA-box factor binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein E cgd5_3540 cyclin domain protein K15196 BRF1; transcription factor IIIB 90 kDa subunit E cgd4_1270 transcription factor TFIIIB, SANT domain K15198 BDP1; transcription factor TFIIIB component B'' D TFIIIC E cgd5_1280 tfc4p like TFIIIC subunit; TPR repeat containing basal transcription factor K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) E cgd2_730 RNA polymerase III transcription factor (TF)IIIC subunit tau/Tfc1p K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) D TFIIIC, fungi type E cgd2_730 RNA polymerase III transcription factor (TF)IIIC subunit tau/Tfc1p K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) E cgd5_1280 tfc4p like TFIIIC subunit; TPR repeat containing basal transcription factor K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) C Other transcription-related factors D snRNA-activating protein complex (SNAPc) E cgd7_1050 hypothetical protein K15210 SNAPC3; snRNA-activating protein complex subunit 3 D Octamer transcription factors D Others B RNA polymerase I system C RNA polymerase I D Core subunits E cgd5_730 DNA-directed RNA polymerase I K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] E cgd1_2770 RNA polymerase 1 beta subunit K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] E cgd8_300 RNA polymerase III C5 subunit K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 E cgd4_3200 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 D Pol I specific subunits E cgd1_1620 RPB7 like OB fold RNA polymerase subunit K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 D Pol I, II, III common subunits E cgd2_980 DNA-directed RNA polymerase 2 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E cgd7_4770 DNA-directed RNA polymerase subunit K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E cgd1_2260 RNA polymerase II B8 subunit K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E cgd7_3240 transcription activator K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E cgd4_3260 DNA-directed RNA polymerases I, II, and III 8.3 kda polypeptide K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 C Basal transcription factors D SL1/TIF-1B E cgd8_2030 TATA-box factor binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein C Other transcription-related factors D UBF D Transcription initiation factors E cgd6_2810 hypothetical protein K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 D Transcription elongation factors E cgd2_2820 transcription factor K15171 SUPT4H1; transcription elongation factor SPT4 E cgd6_4650 5kows transcription initiation protein SPT5 K15172 SUPT5H; transcription elongation factor SPT5 D NoRC (nucleolar remodeling complex) E cgd6_3860 SNF2 helicase K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] D CTDK-I complex D Transcription termination factors D Others # AProkaryotic type B Bacterial type C RNA polymerase D Core subunits D Sigma factors C Other transcription-related factors D RNA polymerase-associated proteins D Transcription elongation factors D Transcription termination factor B Archaeal type C RNA polymerase D Core subunits C Basal transcription factors D TFB E cgd8_880 transcription initiation factor TFIIB Sua7p; ZnR+2cyclins K03124 TFIIB; transcription initiation factor TFIIB D TFE D TFS ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024