+D GENES KO #

  KEGG Orthology (KO) - Parasphaerochaeta coccoides

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:scc00010] D Spico_1061 Hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Spico_0094 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1622 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1786 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Spico_0010 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D Spico_1788 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Spico_0889 pyrophosphate-dependent phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D Spico_1607 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Spico_0925 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Spico_0473 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Spico_0471 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Spico_0086 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Spico_0472 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Spico_0087 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Spico_0424 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Spico_1187 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Spico_0349 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Spico_0628 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Spico_1653 Dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_1805 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Spico_1643 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Spico_0344 alcohol dehydrogenase AdhE; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Spico_1567 Butyrate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Spico_0968 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Spico_0176 HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D Spico_1017 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Spico_1316 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:scc00020] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_1443 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Spico_1442 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Spico_1310 Pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Spico_1316 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Spico_1653 Dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Spico_1805 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:scc00030] D Spico_1786 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Spico_0010 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D Spico_0606 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Spico_0121 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Spico_0122 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Spico_1077 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Spico_0036 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Spico_1255 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Spico_0021 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Spico_1510 metalloenzyme domain protein K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Spico_1017 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Spico_1046 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Spico_0041 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Spico_0042 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Spico_1227 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Spico_1607 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Spico_0925 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Spico_1788 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Spico_0889 pyrophosphate-dependent phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:scc00040] D Spico_0157 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Spico_1844 4-deoxy-L-threo-5-hexulose uronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D Spico_1205 Alpha-galactosidase K22933 lplD; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67] D Spico_0046 D-glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Spico_0048 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D Spico_0047 D-altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D Spico_1185 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Spico_1183 Mannitol 2-dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D Spico_0343 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Spico_0606 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Spico_0342 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D Spico_0155 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Spico_0017 Xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Spico_1261 Xylose isomerase domain-containing protein TIM barrel K01805 xylA; xylose isomerase [EC:5.3.1.5] D Spico_0156 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Spico_1647 Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D Spico_1665 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D Spico_0120 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:scc00051] D Spico_0946 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Spico_0280 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Spico_0956 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Spico_1665 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D Spico_0120 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Spico_1661 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D Spico_1647 Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D Spico_1061 Hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Spico_1788 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Spico_0889 pyrophosphate-dependent phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D Spico_1649 3-oxoacyl-(acyl-carrier-protein) reductase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D Spico_1648 Alcohol dehydrogenase zinc-binding domain protein K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D Spico_1261 Xylose isomerase domain-containing protein TIM barrel K01805 xylA; xylose isomerase [EC:5.3.1.5] D Spico_0156 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Spico_1607 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Spico_0925 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Spico_0473 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Spico_1077 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:scc00052] D Spico_0968 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Spico_1232 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Spico_0431 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Spico_0957 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Spico_1017 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Spico_1061 Hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Spico_0094 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1622 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_0718 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Spico_1613 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Spico_0769 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Spico_1068 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Spico_1788 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Spico_1069 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Spico_0768 Oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism [PATH:scc00053] D Spico_0343 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:scc00500] D Spico_1069 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Spico_0720 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Spico_0770 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Spico_0747 broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Spico_0936 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Spico_0935 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Spico_0657 (1->4)-alpha-D-glucan branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Spico_0240 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Spico_1050 Cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Spico_0768 Oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D Spico_1597 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Spico_0443 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Spico_0536 glycoside hydrolase family 57 K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Spico_1537 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D Spico_1538 Kojibiose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D Spico_1017 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Spico_1061 Hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Spico_0094 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1622 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1786 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Spico_0010 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D Spico_0946 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:scc00520] D Spico_0897 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Spico_1850 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Spico_0284 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Spico_1061 Hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Spico_0946 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Spico_0027 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Spico_0378 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Spico_0340 Alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Spico_0671 Xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Spico_0724 Xylan 1,4-beta-xylosidase K22268 xylA; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Spico_0094 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1622 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1017 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Spico_1232 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Spico_0431 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Spico_0957 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Spico_1786 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Spico_0010 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D Spico_0280 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Spico_0956 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Spico_0936 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:scc00620] D Spico_1567 Butyrate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Spico_1805 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Spico_1653 Dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_1550 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Spico_0344 alcohol dehydrogenase AdhE; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Spico_0875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Spico_1011 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Spico_0349 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Spico_1566 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Spico_1563 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Spico_1564 biotin carboxylase; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Spico_1565 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Spico_1643 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Spico_1581 Methylglyoxal reductase (NADPH-dependent) K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] D Spico_0292 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Spico_0452 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Spico_0088 Protein of unknown function DUF2088 K22373 larA; lactate racemase [EC:5.1.2.1] D Spico_1680 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Spico_0318 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Spico_1173 glutaconyl-CoA decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Spico_1310 Pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Spico_1443 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Spico_1442 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Spico_1316 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Spico_0628 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Spico_0322 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Spico_0323 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:scc00630] D Spico_1567 Butyrate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Spico_0266 Catalase K03781 katE; catalase [EC:1.11.1.6] D Spico_1018 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Spico_1031 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Spico_1782 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Spico_1082 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Spico_1215 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Spico_1214 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Spico_1217 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_1216 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Spico_1775 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Spico_0041 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:scc00640] D Spico_1567 Butyrate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Spico_0875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Spico_1011 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Spico_1651 Pyruvate dehydrogenase (acetyl-transferring) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Spico_1292 Pyruvate dehydrogenase (acetyl-transferring) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_1550 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Spico_1566 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Spico_1563 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Spico_1564 biotin carboxylase; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Spico_1565 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Spico_1643 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Spico_1581 Methylglyoxal reductase (NADPH-dependent) K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] C 00650 Butanoate metabolism [PATH:scc00650] D Spico_1558 reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Spico_0344 alcohol dehydrogenase AdhE; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Spico_0318 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Spico_1173 glutaconyl-CoA decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Spico_1550 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Spico_1805 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Spico_1615 Alcohol dehydrogenase (NADP(+)) K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80] D Spico_0328 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Spico_0320 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:scc00660] D Spico_0328 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Spico_0320 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Spico_0324 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Spico_0325 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Spico_0326 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:scc00562] D Spico_0082 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Spico_0085 2-keto-myo-inositol dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D Spico_0084 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D Spico_0083 myo-inositol catabolism IolB domain protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D Spico_0473 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:scc00190] D Spico_0757 V-type ATP synthase alpha chain K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Spico_0756 V-type ATP synthase beta chain K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Spico_0762 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Spico_0755 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Spico_0758 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Spico_0759 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Spico_0761 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Spico_0760 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:scc00710] D Spico_0472 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Spico_0087 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Spico_0471 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Spico_0086 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Spico_1607 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Spico_0925 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Spico_0121 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Spico_0122 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Spico_1077 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Spico_0473 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Spico_0606 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Spico_0628 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:scc00720] D Spico_1805 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Spico_0628 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Spico_1310 Pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Spico_1443 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Spico_1442 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Spico_1566 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Spico_1563 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Spico_1564 biotin carboxylase; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Spico_1565 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Spico_0271 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Spico_0483 5; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Spico_0503 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Spico_1011 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Spico_0875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Spico_1567 Butyrate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:scc00680] D Spico_1082 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Spico_1187 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Spico_1607 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Spico_0925 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Spico_1788 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Spico_0875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Spico_1011 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Spico_1567 Butyrate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Spico_0424 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Spico_0402 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Spico_0290 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D Spico_1555 malate dehydrogenase (NAD) K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337] C 00910 Nitrogen metabolism [PATH:scc00910] D Spico_0375 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Spico_1768 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Spico_1782 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Spico_0573 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Spico_0572 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Spico_1117 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Spico_0372 Glutamate synthase (NADPH) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:scc00920] D Spico_0677 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Spico_0795 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Spico_1008 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Spico_1758 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Spico_1472 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Spico_1380 Cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:scc00061] D Spico_1566 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Spico_1563 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Spico_1564 biotin carboxylase; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Spico_1565 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Spico_0519 Acyl carrier protein K02078 acpP; acyl carrier protein D Spico_1562 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Spico_1560 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Spico_1561 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Spico_1573 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Spico_1559 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Spico_1558 reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Spico_0884 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0899 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0978 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0277 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:scc00071] D Spico_0884 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0899 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0978 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0277 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0344 alcohol dehydrogenase AdhE; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:scc00561] D Spico_1775 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Spico_1557 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Spico_1328 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Spico_0433 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Spico_1853 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Spico_0304 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Spico_0769 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Spico_1068 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:scc00564] D Spico_1328 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Spico_0433 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Spico_1853 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Spico_1458 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Spico_0285 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Spico_0694 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Spico_0221 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Spico_1080 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Spico_0300 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Spico_1438 Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:scc00600] D Spico_0718 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Spico_1613 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Spico_0384 Galactosylceramidase K01202 GALC; galactosylceramidase [EC:3.2.1.46] D Spico_0361 sulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8] D Spico_0769 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Spico_1068 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Spico_0897 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:scc00230] D Spico_1307 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Spico_1510 metalloenzyme domain protein K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Spico_1017 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Spico_1046 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Spico_0862 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Spico_1245 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Spico_0863 Phosphoribosylamine--glycine ligase K13713 purCD; fusion protein PurCD [EC:6.3.2.6 6.3.4.13] D Spico_0857 phosphoribosylformylglycinamidine synthase subunit II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Spico_0859 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Spico_0858 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Spico_0861 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Spico_0860 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Spico_1299 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Spico_1767 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Spico_0625 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Spico_0964 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Spico_1231 Multifunctional protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Spico_1730 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Spico_0066 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Spico_1108 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Spico_1294 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Spico_0448 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Spico_0797 Nucleoside-triphosphatase rdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Spico_1794 molybdopterin dehydrogenase FAD-binding protein K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D Spico_1324 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Spico_1766 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Spico_1765 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Spico_0846 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Spico_0681 metal-dependent phosphohydrolase HD sub domain protein K01129 dgt; dGTPase [EC:3.1.5.1] D Spico_1076 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Spico_1296 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Spico_0117 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D Spico_1688 Conserved hypothetical protein CHP00282 K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Spico_0727 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:scc00240] D Spico_1731 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Spico_1732 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Spico_1029 aspartate carbamoyltransferase K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2] D Spico_1025 dihydroorotase, putative K01465 URA4; dihydroorotase [EC:3.5.2.3] D Spico_1026 dihydroorotate dehydrogenase family protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Spico_1028 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Spico_1027 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Spico_1056 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Spico_0689 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Spico_1784 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Spico_0612 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Spico_0906 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Spico_1228 AAA ATPase K00876 udk; uridine kinase [EC:2.7.1.48] D Spico_0967 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Spico_0964 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Spico_1231 Multifunctional protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Spico_1730 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Spico_0460 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Spico_0728 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Spico_1688 Conserved hypothetical protein CHP00282 K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Spico_0846 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Spico_1766 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Spico_1765 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Spico_1311 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Spico_0587 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Spico_0600 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Spico_0037 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Spico_1594 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:scc00250] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Spico_0270 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Spico_1551 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Spico_1769 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Spico_0711 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Spico_1052 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Spico_1296 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Spico_1299 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Spico_1029 aspartate carbamoyltransferase K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2] D Spico_0573 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Spico_0572 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Spico_1117 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Spico_0372 Glutamate synthase (NADPH) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Spico_0375 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Spico_1768 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Spico_1782 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Spico_1731 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Spico_1732 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Spico_0859 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Spico_0862 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:scc00260] D Spico_0268 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Spico_0429 Aspartate kinase., Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Spico_1319 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Spico_0290 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D Spico_0430 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Spico_1432 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Spico_1082 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Spico_1775 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Spico_0424 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Spico_0402 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Spico_1064 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Spico_1215 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Spico_1214 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Spico_1217 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_1216 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Spico_0076 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Spico_1620 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Spico_0870 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:scc00270] D Spico_1008 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Spico_1758 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Spico_1433 Cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Spico_0502 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Spico_0024 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Spico_1411 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Spico_0979 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Spico_0025 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Spico_0218 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Spico_1410 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Spico_0268 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Spico_0429 Aspartate kinase., Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Spico_1319 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Spico_1472 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Spico_1380 Cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Spico_1473 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Spico_1617 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_1331 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Spico_1643 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Spico_0076 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Spico_0402 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:scc00280] D Spico_1617 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_1331 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_1651 Pyruvate dehydrogenase (acetyl-transferring) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Spico_1292 Pyruvate dehydrogenase (acetyl-transferring) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:scc00290] D Spico_1620 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Spico_0324 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Spico_0325 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Spico_0326 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Spico_0328 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Spico_0320 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Spico_0321 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Spico_0327 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Spico_1617 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_1331 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_0322 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Spico_0323 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:scc00300] D Spico_0268 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Spico_0429 Aspartate kinase., Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Spico_1319 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Spico_0779 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Spico_0780 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Spico_1771 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Spico_0778 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Spico_0777 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Spico_0910 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Spico_0653 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:scc00310] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_1338 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D Spico_1043 protein of unknown function DUF849 K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:scc00220] D Spico_0229 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Spico_0711 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Spico_1052 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Spico_0859 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Spico_1782 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Spico_1731 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Spico_1732 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Spico_0375 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Spico_1768 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Spico_1773 N-acetylglutamate synthase; glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Spico_1772 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Spico_1774 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Spico_1771 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:scc00330] D Spico_1778 Hydantoinase/oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Spico_0914 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Spico_0919 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Spico_0920 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:scc00340] D Spico_1427 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Spico_1420 Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Spico_1422 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Spico_1423 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Spico_1421 Imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Spico_1424 Imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D Spico_1425 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Spico_1635 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Spico_1426 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:scc00350] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Spico_1425 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Spico_0344 alcohol dehydrogenase AdhE; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:scc00360] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Spico_1425 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:scc00380] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Spico_0266 Catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:scc00400] D Spico_0877 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Spico_1823 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Spico_0526 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Spico_0687 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D Spico_0683 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Spico_1431 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Spico_0684 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Spico_0870 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Spico_0550 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Spico_1425 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00430 Taurine and hypotaurine metabolism [PATH:scc00430] D Spico_1011 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Spico_0875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D Spico_1345 beta-lactamase domain protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:scc00450] D Spico_1380 Cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Spico_1433 Cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Spico_0502 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Spico_1761 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Spico_0934 thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Spico_0705 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:scc00460] D Spico_0720 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Spico_0770 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Spico_0747 broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Spico_0270 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Spico_1551 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Spico_1082 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:scc00470] D Spico_0911 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Spico_0859 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Spico_0703 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Spico_0777 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:scc00480] D Spico_1851 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:scc00511] D Spico_0718 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Spico_1613 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Spico_0897 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Spico_1282 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D Spico_0890 Beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D Spico_0365 glycoside hydrolase family 29 (alpha-L-fucosidase) K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis [PATH:scc00540] D Spico_1623 sugar isomerase (SIS) K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:scc00541] D Spico_0957 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Spico_1254 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Spico_0280 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Spico_0956 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00550 Peptidoglycan biosynthesis [PATH:scc00550] D Spico_0027 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Spico_0378 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Spico_0908 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Spico_0703 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Spico_0910 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Spico_0911 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Spico_0653 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Spico_0693 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Spico_0652 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Spico_0638 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Spico_0641 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:scc00552] D Spico_0304 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:scc00543] D Spico_1008 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:scc00730] D Spico_0525 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Spico_0524 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Spico_0454 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Spico_0158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Spico_0548 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Spico_0727 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:scc00740] D Spico_0597 FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Spico_1094 nitroreductase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] D Spico_1307 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:scc00750] D Spico_1059 Phosphomethylpyrimidine kinase type-1 K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D Spico_0402 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Spico_0430 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:scc00760] D Spico_0916 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Spico_0066 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Spico_1108 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Spico_0964 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Spico_1231 Multifunctional protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Spico_1730 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Spico_1000 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Spico_1349 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Spico_0486 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Spico_0661 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Spico_1504 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Spico_1503 NAD(P)(+) transhydrogenase-like protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Spico_1502 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:scc00770] D Spico_0328 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Spico_0320 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Spico_0321 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Spico_0327 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Spico_1085 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Spico_1314 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Spico_0623 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Spico_0517 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Spico_1343 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Spico_1454 Holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Spico_1617 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_1331 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:scc00780] D Spico_1560 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Spico_1561 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Spico_1573 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Spico_1559 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Spico_0441 serine palmitoyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Spico_1006 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:scc00785] D Spico_1213 lipoyltransferase and lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_1653 Dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Spico_1651 Pyruvate dehydrogenase (acetyl-transferring) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Spico_1292 Pyruvate dehydrogenase (acetyl-transferring) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Spico_1215 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Spico_1214 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Spico_1217 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Spico_1216 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:scc00790] D Spico_0158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Spico_0900 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Spico_0410 Radical SAM domain protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Spico_0411 Radical SAM domain protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] C 00670 One carbon pool by folate [PATH:scc00670] D Spico_0271 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Spico_0483 5; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Spico_1082 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Spico_1767 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Spico_1447 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Spico_1217 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Spico_1594 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Spico_0503 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Spico_1115 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:scc00860] D Spico_0982 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Spico_0855 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Spico_0112 hypothetical protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Spico_1370 hypothetical protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:scc00130] D Spico_0963 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Spico_0071 hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:scc00900] D Spico_0695 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Spico_1599 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Spico_0976 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Spico_1600 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Spico_0464 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Spico_0216 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Spico_0693 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Spico_0121 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Spico_0122 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D Spico_1254 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Spico_1254 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:scc00946] D Spico_0720 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Spico_0770 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Spico_0747 broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:scc00332] D Spico_0919 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Spico_0920 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:scc00261] D Spico_0268 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Spico_0429 Aspartate kinase., Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Spico_1319 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Spico_0779 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Spico_0780 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:scc00521] D Spico_1061 Hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Spico_0094 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1622 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1017 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Spico_0082 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Spico_1254 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis [PATH:scc00524] D Spico_1061 Hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Spico_0094 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Spico_1622 Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D Spico_1254 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:scc00401] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Spico_1425 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D Spico_1562 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Spico_1561 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Spico_1573 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Spico_0519 Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:scc00999] D Spico_0024 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Spico_0687 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D Spico_0720 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Spico_0770 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Spico_0747 broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D Spico_0318 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Spico_1173 glutaconyl-CoA decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:scc00625] D Spico_0344 alcohol dehydrogenase AdhE; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Spico_0892 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Spico_1429 HAD superfamily (subfamily IA) hydrolase, TIGR02254 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D Spico_1429 HAD superfamily (subfamily IA) hydrolase, TIGR02254 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:scc00626] D Spico_0344 alcohol dehydrogenase AdhE; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:scc03020] D Spico_1722 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Spico_1721 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Spico_1691 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Spico_0988 ATPase K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors D Spico_0685 helicase domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:scc03010] D Spico_0613 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1 D Spico_0690 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Spico_1710 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Spico_1692 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Spico_1699 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Spico_0702 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Spico_1719 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Spico_1702 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Spico_1191 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Spico_1717 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Spico_1693 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Spico_1720 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Spico_1694 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Spico_1703 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Spico_0598 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Spico_0510 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Spico_1707 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Spico_0700 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Spico_1712 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Spico_1238 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Spico_0398 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Spico_1725 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Spico_1713 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Spico_1716 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Spico_1715 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Spico_1704 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Spico_1701 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Spico_1723 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Spico_0698 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Spico_1724 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Spico_1726 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Spico_1192 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Spico_1706 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Spico_1697 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Spico_1709 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Spico_1690 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Spico_1700 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Spico_0514 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Spico_0929 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Spico_1003 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Spico_1711 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Spico_1714 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Spico_1705 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Spico_0973 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Spico_1002 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Spico_0428 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Spico_1708 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Spico_1698 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Spico_1233 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Spico_0518 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Spico_1729 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Spico_0005 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Spico_0928 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Spico_1695 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Spico_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0031 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Spico_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Spico_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Spico_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Spico_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Spico_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:scc00970] D Spico_R0049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Spico_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Spico_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Spico_R0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Spico_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0056 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0047 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0042 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Spico_R0007 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Spico_R0048 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Spico_R0043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Spico_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Spico_R0019 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Spico_R0026 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Spico_R0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Spico_R0014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Spico_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Spico_R0033 tRNA-His K14226 tRNA-His; tRNA His D Spico_R0003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Spico_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0035 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Spico_R0027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Spico_R0046 tRNA-Met K14230 tRNA-Met; tRNA Met D Spico_R0051 tRNA-Met K14230 tRNA-Met; tRNA Met D Spico_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met D Spico_R0045 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Spico_R0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Spico_R0009 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Spico_R0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Spico_R0057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Spico_R0058 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Spico_R0054 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Spico_R0055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Spico_R0053 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Spico_R0021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Spico_R0015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Spico_R0052 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Spico_R0018 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Spico_R0010 tRNA-Val K14237 tRNA-Val; tRNA Val D Spico_R0011 tRNA-Val K14237 tRNA-Val; tRNA Val D Spico_R0013 tRNA-Val K14237 tRNA-Val; tRNA Val D Spico_0982 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Spico_0948 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Spico_1103 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Spico_1301 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Spico_0126 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Spico_0886 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Spico_0981 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Spico_0219 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Spico_0915 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Spico_0379 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Spico_0705 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Spico_1447 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Spico_1492 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0387 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0420 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0089 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Spico_0522 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Spico_1489 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Spico_1005 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Spico_0119 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Spico_0528 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Spico_1289 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Spico_1288 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Spico_0980 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Spico_1376 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:scc03060] D Spico_1696 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Spico_1728 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Spico_0474 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Spico_0214 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Spico_0213 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Spico_0007 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D Spico_0639 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Spico_0509 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Spico_R0059 RNA component of signal recognition particle K01983 ffs; SRP RNA D Spico_0539 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Spico_0580 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Spico_0148 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:scc04122] D Spico_0525 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Spico_0283 tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Spico_0410 Radical SAM domain protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Spico_0411 Radical SAM domain protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Spico_0524 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:scc03018] D Spico_1330 DEAD/DEAH box helicase domain protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Spico_1187 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Spico_0599 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Spico_0305 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Spico_0432 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Spico_1234 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Spico_1689 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Spico_1788 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Spico_1678 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Spico_0212 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Spico_0529 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:scc03030] D Spico_0281 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Spico_1795 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Spico_0635 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_1840 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_1591 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Spico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Spico_0697 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Spico_0619 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Spico_0701 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_1055 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_0730 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Spico_0507 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Spico_1344 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Spico_1790 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:scc03410] D Spico_0856 DNA-(apurinic or apyrimidinic site) lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Spico_0843 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Spico_1824 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Spico_0977 Uracil-DNA glycosylase superfamily K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] D Spico_0288 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Spico_0358 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Spico_1497 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Spico_1452 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Spico_0748 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Spico_1344 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Spico_0397 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Spico_1790 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:scc03420] D Spico_0676 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Spico_0465 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Spico_0943 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Spico_1592 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D Spico_1194 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Spico_0744 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Spico_1344 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Spico_1790 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Spico_0685 helicase domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:scc03430] D Spico_0590 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D Spico_0455 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Spico_0405 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D Spico_1194 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Spico_0744 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Spico_1062 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Spico_0783 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Spico_0784 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Spico_0397 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Spico_0701 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_1055 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_1795 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Spico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Spico_0635 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_1840 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_1591 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Spico_0281 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Spico_1790 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Spico_0552 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:scc03440] D Spico_0397 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Spico_0701 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_1055 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_0003 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D Spico_0396 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Spico_1841 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Spico_0608 RecA protein K03553 recA; recombination protein RecA D Spico_1344 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Spico_0584 Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D Spico_0585 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Spico_0583 Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Spico_0133 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Spico_1161 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Spico_1797 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Spico_1142 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Spico_1795 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Spico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Spico_0635 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_1840 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_1591 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Spico_0281 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Spico_1451 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:scc02010] D Spico_0272 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Spico_0310 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Spico_0273 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Spico_0311 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Spico_0274 Polyamine-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Spico_0312 Polyamine-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Spico_0940 ABC transporter, periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein D Spico_0941 binding-protein-dependent transport systems inner membrane component K02063 thiP; thiamine transport system permease protein D Spico_0942 Fe(3+)-transporting ATPase K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D Spico_1297 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Spico_0850 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Spico_0849 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Spico_0848 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Spico_0847 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Spico_0269 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Spico_0893 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Spico_0259 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Spico_0895 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Spico_0260 carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Spico_0894 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Spico_0261 carbohydrate ABC transporter membrane protein 2, CUT1 family K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Spico_1210 extracellular solute-binding protein family 1 K10192 togB; oligogalacturonide transport system substrate-binding protein D Spico_1209 binding-protein-dependent transport systems inner membrane component K10193 togM; oligogalacturonide transport system permease protein D Spico_1208 carbohydrate ABC transporter membrane protein 2, CUT1 family K10194 togN; oligogalacturonide transport system permease protein D Spico_1279 extracellular solute-binding protein family 1 K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein D Spico_1280 binding-protein-dependent transport systems inner membrane component K17242 aguF; alpha-1,4-digalacturonate transport system permease protein D Spico_1281 binding-protein-dependent transport systems inner membrane component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein D Spico_0500 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0058 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0385 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0714 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_1072 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_1532 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0362 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0383 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Spico_0056 carbohydrate ABC transporter membrane protein 1, CUT1 family K17319 lplB; putative aldouronate transport system permease protein D Spico_0364 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Spico_0494 carbohydrate ABC transporter membrane protein 1, CUT1 family K17319 lplB; putative aldouronate transport system permease protein D Spico_0716 carbohydrate ABC transporter membrane protein 1, CUT1 family K17319 lplB; putative aldouronate transport system permease protein D Spico_1071 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Spico_1534 carbohydrate ABC transporter membrane protein 1, CUT1 family K17319 lplB; putative aldouronate transport system permease protein D Spico_0057 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Spico_0382 carbohydrate ABC transporter membrane protein 2, CUT1 family K17320 lplC; putative aldouronate transport system permease protein D Spico_0493 carbohydrate ABC transporter membrane protein 2, CUT1 family K17320 lplC; putative aldouronate transport system permease protein D Spico_0715 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Spico_1070 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Spico_1533 carbohydrate ABC transporter membrane protein 2, CUT1 family K17320 lplC; putative aldouronate transport system permease protein D Spico_0363 carbohydrate ABC transporter membrane protein 2, CUT1 family K17320 lplC; putative aldouronate transport system permease protein D Spico_0723 carbohydrate ABC transporter substrate-binding protein, CUT1 family K10240 cebE; cellobiose transport system substrate-binding protein D Spico_0722 carbohydrate ABC transporter membrane protein 1, CUT1 family K10241 cebF; cellobiose transport system permease protein D Spico_0721 carbohydrate ABC transporter membrane protein 2, CUT1 family K10242 cebG; cellobiose transport system permease protein D Spico_1112 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Spico_0062 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Spico_0064 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein D Spico_1110 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Spico_0065 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Spico_1109 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Spico_0063 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Spico_1111 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Spico_1629 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein D Spico_1644 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_0014 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_0078 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_1814 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_1403 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Spico_0097 bifunctional carbohydrate binding and transport protein K10439 rbsB; ribose transport system substrate-binding protein D Spico_1628 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_1645 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_0016 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_0079 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_1812 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_0099 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Spico_0100 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Spico_1626 monosaccharide-transporting ATPase K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_0081 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_0098 Monosaccharide-transporting ATPase K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_0015 Monosaccharide-transporting ATPase K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_1627 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_1646 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_1813 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_0335 monosaccharide ABC transporter substrate-binding protein, CUT2 family K23508 ytfQ; galactofuranose transport system substrate-binding protein D Spico_0338 monosaccharide ABC transporter membrane protein, CUT2 family K23509 ytfT; galactofuranose transport system permease protein D Spico_0337 monosaccharide ABC transporter membrane protein, CUT2 family K23509 ytfT; galactofuranose transport system permease protein D Spico_0336 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D Spico_1400 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10540 mglB; methyl-galactoside transport system substrate-binding protein D Spico_1404 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10540 mglB; methyl-galactoside transport system substrate-binding protein D Spico_1398 monosaccharide ABC transporter membrane protein, CUT2 family K10541 mglC; methyl-galactoside transport system permease protein D Spico_1399 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D Spico_1659 rhamnose-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D Spico_1657 inner-membrane translocator K10560 rhaP; rhamnose transport system permease protein D Spico_1656 inner-membrane translocator K10561 rhaQ; rhamnose transport system permease protein D Spico_1658 Monosaccharide-transporting ATPase K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D Spico_1039 sugar ABC transporter (sugar-binding protein) K17213 K17213; inositol transport system substrate-binding protein D Spico_1037 inner-membrane translocator K17214 K17214; inositol transport system permease protein D Spico_1038 monosaccharide ABC transporter ATP-binding protein, CUT2 family K17215 K17215; inositol transport system ATP-binding protein D Spico_1415 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Spico_1413 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Spico_1414 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Spico_0435 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Spico_0436 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Spico_0437 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Spico_0438 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Spico_1408 amino acid ABC transporter substrate-binding protein, PAAT family K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D Spico_1406 amino acid ABC transporter membrane protein 2, PAAT family K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D Spico_1407 amino acid ABC transporter membrane protein 1, PAAT family K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D Spico_1409 amino acid ABC transporter ATP-binding protein, PAAT family K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D Spico_0879 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_1092 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_1580 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_0107 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_0880 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Spico_1091 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Spico_1579 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Spico_0108 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Spico_0109 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_0881 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Spico_1090 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_1578 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_0882 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_1089 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_1577 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_0110 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_0111 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_0883 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_1088 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_1576 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_0227 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Spico_0226 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Spico_0225 Sulfate-transporting ATPase K02071 metN; D-methionine transport system ATP-binding protein D Spico_1201 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Spico_1196 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Spico_1197 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Spico_1198 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Spico_1199 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Spico_1668 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Spico_0223 ABC-3 protein K09816 znuB; zinc transport system permease protein D Spico_0224 Fe(3+)-transporting ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Spico_1007 BioY protein K03523 bioY; biotin transport system substrate-specific component D Spico_1114 cobalt transport protein K16783 bioN; biotin transport system permease protein D Spico_1113 Fe(3+)-transporting ATPase K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D Spico_1394 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Spico_1326 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Spico_0540 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Spico_0542 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Spico_0541 Phosphonate-transporting ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Spico_0601 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Spico_0602 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Spico_1585 Fe(3+)-transporting ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Spico_1536 Xenobiotic-transporting ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1535 Xenobiotic-transporting ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1273 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_0172 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1521 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_0171 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1520 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1272 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:scc02060] D Spico_1508 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Spico_1685 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Spico_1509 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Spico_1589 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Spico_0753 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Spico_1116 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:scc03070] D Spico_0214 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Spico_1728 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Spico_0474 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Spico_1696 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Spico_0213 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Spico_0007 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D Spico_0639 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Spico_0539 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Spico_0509 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:scc02020] D Spico_0421 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Spico_0393 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Spico_0422 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Spico_0158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Spico_0435 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Spico_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Spico_1745 citrate lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D Spico_1750 Citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D Spico_1749 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Spico_1748 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D Spico_1744 holo-ACP synthase CitX K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52] D Spico_1680 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Spico_1782 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Spico_1352 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Spico_1586 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Spico_1317 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Spico_1625 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_0178 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1382 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1402 multi-sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1740 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1624 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_0177 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1381 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1401 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1741 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1206 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_0157 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:scc02024] D Spico_1410 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Spico_0877 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Spico_0879 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_1092 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_1580 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_0107 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_0880 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Spico_1091 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Spico_1579 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Spico_0108 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Spico_0109 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_0881 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Spico_1090 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_1578 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_0882 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_1089 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_1577 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_0110 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_0111 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_0883 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_1088 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_1576 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_0884 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0899 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0978 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0277 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_1317 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Spico_0289 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Spico_1201 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Spico_1196 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Spico_1197 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Spico_1198 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Spico_1199 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Spico_1596 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Spico_0007 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D Spico_1728 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Spico_0474 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Spico_1696 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Spico_0213 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Spico_0639 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Spico_0539 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Spico_0509 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:scc02030] D Spico_1629 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein D Spico_1644 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_0014 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_0078 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_1814 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_1403 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Spico_0097 bifunctional carbohydrate binding and transport protein K10439 rbsB; ribose transport system substrate-binding protein D Spico_1400 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10540 mglB; methyl-galactoside transport system substrate-binding protein D Spico_1404 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10540 mglB; methyl-galactoside transport system substrate-binding protein C 02040 Flagellar assembly [PATH:scc02040] D Spico_0618 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Spico_0629 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Spico_1586 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Spico_1187 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:scc01501] D Spico_1201 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Spico_1196 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Spico_1197 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Spico_1198 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Spico_1199 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Spico_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Spico_0641 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:scc01502] D Spico_0911 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Spico_0653 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Spico_0652 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Spico_0638 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:scc01503] D Spico_0917 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Spico_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:scc01000] C 01001 Protein kinases [BR:scc01001] D Spico_0421 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Spico_0393 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Spico_1625 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_0178 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1382 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1402 multi-sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1740 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:scc01009] D Spico_1788 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Spico_1820 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:scc01002] D Spico_0148 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Spico_0458 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D Spico_1324 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Spico_0862 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Spico_0573 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Spico_1769 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Spico_0876 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D Spico_1436 Abortive infection protein K07052 K07052; CAAX protease family protein D Spico_0418 Abortive infection protein K07052 K07052; CAAX protease family protein D Spico_0798 oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Spico_1351 peptidase M3A and M3B thimet/oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Spico_1457 peptidase M16 domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D Spico_1179 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Spico_0236 Gly-Xaa carboxypeptidase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-] D Spico_1461 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Spico_1851 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Spico_0489 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D Spico_0479 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Spico_1833 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Spico_0622 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Spico_0621 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Spico_0786 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Spico_0220 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Spico_0970 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Spico_0696 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Spico_1476 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Spico_0793 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Spico_0390 ATP dependent PIM1 peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Spico_1590 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Spico_0580 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Spico_1835 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Spico_0116 Peptidase S54, rhomboid domain protein K07059 K07059; rhomboid family protein D Spico_0644 ATP-dependent protease hslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Spico_1318 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Spico_0389 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Spico_0707 HflC protein K04087 hflC; modulator of FtsH protease HflC D Spico_0706 protease FtsH subunit HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:scc01003] D Spico_0304 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Spico_0935 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:scc01005] D Spico_1623 sugar isomerase (SIS) K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:scc01011] D Spico_0027 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Spico_0378 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Spico_0908 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Spico_0703 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Spico_0910 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Spico_0911 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Spico_0652 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Spico_0638 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Spico_0604 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Spico_0641 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Spico_0295 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Spico_1490 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Spico_0917 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:scc01004] D Spico_1562 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Spico_1560 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Spico_1561 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Spico_1573 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Spico_1559 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Spico_1558 reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Spico_1567 Butyrate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Spico_0884 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0899 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0978 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0277 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_1328 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Spico_0433 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Spico_1853 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:scc01006] D Spico_0693 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Spico_0904 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:scc01007] D Spico_1489 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Spico_0982 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Spico_0948 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Spico_0980 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Spico_1376 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Spico_0379 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Spico_1005 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Spico_0705 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Spico_0522 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Spico_1492 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0387 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0420 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0089 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Spico_0126 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Spico_0886 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Spico_0528 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Spico_0981 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Spico_0915 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Spico_0119 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Spico_0219 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Spico_1103 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Spico_1301 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Spico_1289 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Spico_1288 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Spico_1045 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Spico_0778 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Spico_1425 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Spico_1064 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Spico_0441 serine palmitoyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Spico_1433 Cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Spico_1771 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Spico_1617 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_1331 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Spico_0402 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:scc00194] B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:scc03000] D Spico_1654 transcriptional regulator, DeoR family K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D Spico_1556 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Spico_0101 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Spico_0341 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Spico_0077 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Spico_0492 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Spico_1260 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Spico_1542 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Spico_1575 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Spico_1663 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Spico_1815 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Spico_0717 transcriptional regulator, GntR family with LacI sensor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D Spico_0012 transcriptional regulator, GntR family with UTRA sensor domain K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D Spico_0022 transcriptional regulator, GntR family with UTRA sensor domain K03710 K03710; GntR family transcriptional regulator D Spico_0073 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Spico_1041 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Spico_0403 putative transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Spico_1274 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Spico_1317 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Spico_0425 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Spico_0574 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Spico_0575 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Spico_0712 regulatory protein ArsR K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Spico_0958 Iron dependent repressor, N-terminal protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Spico_1313 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Spico_1006 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Spico_0302 Trp repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D Spico_0013 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Spico_1471 Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor D Spico_0217 Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor D Spico_0179 hypothetical protein K07727 K07727; putative transcriptional regulator D Spico_0246 hypothetical protein K07727 K07727; putative transcriptional regulator D Spico_0167 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Spico_1862 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Spico_1598 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Spico_1785 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Spico_0141 Sigma 54 interacting domain protein K03974 pspF; psp operon transcriptional activator D Spico_0138 PspC domain protein K03973 pspC; phage shock protein C D Spico_0142 PspC domain protein K03973 pspC; phage shock protein C D Spico_0291 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Spico_0680 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR D Spico_0656 Protein mraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:scc03021] D Spico_0685 helicase domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D Spico_1691 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Spico_1722 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Spico_1721 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Spico_0988 ATPase K03048 rpoE; DNA-directed RNA polymerase subunit delta D Spico_0618 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Spico_0629 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Spico_0380 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Spico_1586 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Spico_0593 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Spico_0478 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Spico_1727 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Spico_0291 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Spico_1234 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:scc03019] D Spico_0520 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Spico_1689 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Spico_1330 DEAD/DEAH box helicase domain protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Spico_0305 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Spico_0432 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Spico_1187 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Spico_0599 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Spico_1234 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Spico_1788 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Spico_1678 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Spico_0212 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Spico_0529 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Spico_0527 protein of unknown function DUF1605 K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:scc03011] D Spico_0613 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1 D Spico_0690 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Spico_1710 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Spico_1692 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Spico_1699 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Spico_0702 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Spico_1719 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Spico_1702 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Spico_1191 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Spico_1717 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Spico_1693 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Spico_1720 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Spico_1694 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Spico_1703 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Spico_0598 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Spico_0510 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Spico_1707 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Spico_0700 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Spico_1712 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Spico_1238 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Spico_0398 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Spico_1725 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Spico_1713 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Spico_1716 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Spico_1715 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Spico_1704 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Spico_1701 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Spico_0698 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Spico_1724 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Spico_1726 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Spico_1723 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Spico_1192 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Spico_1706 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Spico_1697 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Spico_1709 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Spico_1690 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Spico_1700 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Spico_0514 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Spico_0929 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Spico_1003 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Spico_1711 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Spico_1714 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Spico_1705 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Spico_1002 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Spico_0428 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Spico_1708 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Spico_1698 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Spico_1233 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Spico_0518 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Spico_1729 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Spico_0005 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Spico_0928 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Spico_1695 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Spico_0973 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Spico_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Spico_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Spico_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Spico_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0031 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Spico_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Spico_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:scc03009] D Spico_0520 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Spico_0743 Fmu (Sun) domain protein K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] D Spico_1481 GTP-binding protein Era-like-protein K03595 era; GTPase D Spico_1001 GTPase obg K03979 obgE; GTPase [EC:3.6.5.-] D Spico_0291 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Spico_0593 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Spico_0478 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Spico_1727 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Spico_1013 Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Spico_1798 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Spico_1836 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Spico_1595 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Spico_1333 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Spico_0655 Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Spico_0144 Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Spico_1687 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Spico_1676 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Spico_0092 Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Spico_1019 PUA domain containing protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Spico_1359 Ribosomal RNA large subunit methyltransferase L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D Spico_1102 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Spico_1350 (Uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Spico_0611 pseudouridine synthase Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Spico_0787 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Spico_0451 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Spico_1816 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Spico_0512 Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM D Spico_1195 Ribosomal protein S12 methylthiotransferase rimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Spico_0305 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Spico_0454 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Spico_1684 GTP-binding protein engA K03977 engA; GTPase D Spico_1099 GTP-binding proten HflX K03665 hflX; GTPase D Spico_0546 SUA5/yciO/yrdC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Spico_1076 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Spico_0595 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Spico_0592 Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP D Spico_0997 iojap-like protein K09710 ybeB; ribosome-associated protein D Spico_0469 metalloprotease ybeY K07042 ybeY; probable rRNA maturation factor D Spico_0898 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Spico_1098 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:scc03016] D Spico_0543 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Spico_0521 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Spico_0982 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Spico_0119 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Spico_0522 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Spico_0089 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Spico_0705 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Spico_0948 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Spico_1005 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Spico_0126 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Spico_1103 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Spico_1301 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Spico_0886 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Spico_0981 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Spico_0219 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Spico_0915 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Spico_0379 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Spico_1492 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0387 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0420 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Spico_0528 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Spico_1289 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Spico_1288 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Spico_0980 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Spico_1376 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Spico_0607 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Spico_1285 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Spico_0675 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Spico_1453 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Spico_0596 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Spico_0525 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Spico_0546 SUA5/yciO/yrdC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Spico_0904 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Spico_1335 tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Spico_1334 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Spico_0677 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Spico_0006 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Spico_R0017 RNA component of RNaseP K01978 rnpB; M1 RNA D Spico_1315 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D Spico_1489 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Spico_1030 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Spico_1243 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Spico_0484 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Spico_1009 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Spico_0286 tRNA/rRNA methyltransferase (SpoU) K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Spico_0513 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Spico_0913 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Spico_0283 tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Spico_0586 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Spico_0298 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Spico_0603 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Spico_0524 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Spico_0971 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Spico_0933 universal protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Spico_0626 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Spico_0932 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Spico_0599 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:scc03012] D Spico_0594 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Spico_0927 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Spico_0688 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Spico_0691 Elongation factor Ts K02357 tsf; elongation factor Ts D Spico_1718 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Spico_0673 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Spico_0674 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Spico_1604 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Spico_1074 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D Spico_0692 ribosome recycling factor K02838 frr; ribosome recycling factor D Spico_1075 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Spico_0972 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Spico_1828 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Spico_1083 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Spico_1337 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Spico_1336 Lysine--tRNA ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D Spico_0537 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:scc03110] D Spico_0234 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Spico_0794 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Spico_0643 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Spico_1820 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG D Spico_1678 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Spico_0212 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Spico_1677 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D Spico_1846 heat shock protein DnaJ domain protein K05801 djlA; DnaJ like chaperone protein D Spico_1358 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Spico_1679 Protein grpE K03687 GRPE; molecular chaperone GrpE D Spico_1119 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Spico_0631 10 kDa chaperonin K04078 groES; chaperonin GroES D Spico_0970 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Spico_0897 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Spico_0852 peptidylprolyl isomerase FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Spico_1430 FKBP-type peptidyl-prolyl isomerase domain protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D Spico_0731 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Spico_0477 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Spico_1054 thioredoxin K03671 TXN; thioredoxin D Spico_1180 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:scc04131] D Spico_1282 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D Spico_1061 Hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Spico_1607 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Spico_0471 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Spico_0424 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Spico_0349 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Spico_1820 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG D Spico_0376 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:scc04121] C 03051 Proteasome [BR:scc03051] D Spico_1820 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:scc03032] D Spico_0730 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Spico_1237 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Spico_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Spico_0697 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Spico_0619 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Spico_0701 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_1055 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_1795 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Spico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Spico_1591 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Spico_0281 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Spico_0635 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_1840 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_0507 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Spico_1344 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Spico_1790 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Spico_0552 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Spico_1865 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Spico_1866 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Spico_1817 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Spico_1818 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Spico_1096 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Spico_0781 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:scc03036] D Spico_0520 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Spico_1607 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Spico_1237 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Spico_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Spico_0232 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein D Spico_0508 SMC domain protein K03529 smc; chromosome segregation protein D Spico_0609 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Spico_0610 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Spico_0649 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Spico_0641 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Spico_1332 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Spico_0650 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Spico_0651 cell cycle protein K03588 ftsW; cell division protein FtsW D Spico_0648 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Spico_0034 Tubulin/FtsZ GTPase K03531 ftsZ; cell division protein FtsZ D Spico_0917 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Spico_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Spico_0746 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Spico_1863 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Spico_1862 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Spico_1817 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Spico_1818 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Spico_1334 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Spico_1333 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Spico_0647 Tyrosine recombinase xerC K04763 xerD; integrase/recombinase XerD D Spico_1308 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Spico_0767 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Spico_1361 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Spico_0182 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Spico_0194 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] C 03400 DNA repair and recombination proteins [BR:scc03400] D Spico_0044 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Spico_0358 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Spico_0977 Uracil-DNA glycosylase superfamily K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] D Spico_0288 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Spico_0856 DNA-(apurinic or apyrimidinic site) lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Spico_0843 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Spico_1824 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Spico_0685 helicase domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D Spico_1218 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Spico_0032 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Spico_0600 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Spico_1452 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Spico_1497 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Spico_0748 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Spico_0397 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Spico_1790 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Spico_1344 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Spico_0465 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Spico_0943 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Spico_1592 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D Spico_1194 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Spico_0744 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Spico_1722 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Spico_1721 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Spico_1691 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Spico_0988 ATPase K03048 rpoE; DNA-directed RNA polymerase subunit delta D Spico_0676 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Spico_0590 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D Spico_0455 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Spico_0405 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D Spico_1062 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Spico_0783 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Spico_0784 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Spico_1795 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Spico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Spico_1591 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Spico_0281 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Spico_0635 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_1840 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Spico_0701 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_1055 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_0552 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Spico_0608 RecA protein K03553 recA; recombination protein RecA D Spico_0584 Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D Spico_0585 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Spico_0583 Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Spico_1451 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Spico_1860 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Spico_0003 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D Spico_0133 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Spico_1161 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Spico_1797 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Spico_1142 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Spico_0396 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Spico_1841 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Spico_0660 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Spico_1131 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Spico_1155 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Spico_1865 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Spico_1866 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Spico_1096 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Spico_1237 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Spico_0432 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Spico_0912 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Spico_1590 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Spico_1190 Regulatory protein recX K03565 recX; regulatory protein D Spico_0632 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Spico_1766 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Spico_1765 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Spico_0795 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:scc03029] D Spico_0594 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Spico_0927 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Spico_0691 Elongation factor Ts K02357 tsf; elongation factor Ts D Spico_1718 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Spico_0673 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Spico_0674 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Spico_1604 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Spico_1481 GTP-binding protein Era-like-protein K03595 era; GTPase D Spico_0980 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Spico_0089 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Spico_0126 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Spico_0981 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Spico_1005 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Spico_0743 Fmu (Sun) domain protein K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] D Spico_1437 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D Spico_0701 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_1055 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Spico_0589 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Spico_1678 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Spico_1679 Protein grpE K03687 GRPE; molecular chaperone GrpE D Spico_0212 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Spico_0631 10 kDa chaperonin K04078 groES; chaperonin GroES D Spico_1677 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D Spico_0525 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Spico_1308 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Spico_0007 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D Spico_1820 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:scc02000] D Spico_1536 Xenobiotic-transporting ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1535 Xenobiotic-transporting ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1273 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_0172 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1521 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_0171 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1520 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1272 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Spico_1329 Xenobiotic-transporting ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Spico_0272 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Spico_0310 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Spico_0273 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Spico_0311 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Spico_0274 Polyamine-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Spico_0312 Polyamine-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Spico_0940 ABC transporter, periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein D Spico_0941 binding-protein-dependent transport systems inner membrane component K02063 thiP; thiamine transport system permease protein D Spico_0942 Fe(3+)-transporting ATPase K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D Spico_1297 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Spico_0850 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Spico_0849 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Spico_0848 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Spico_0847 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Spico_0351 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Spico_0352 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Spico_0353 Fe(3+)-transporting ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Spico_0269 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Spico_0447 carbohydrate ABC transporter substrate-binding protein, CUT1 family K25086 musE; maltose transport system substrate-binding protein D Spico_1541 extracellular solute-binding protein family 1 K25086 musE; maltose transport system substrate-binding protein D Spico_0446 carbohydrate ABC transporter membrane protein 1, CUT1 family K25087 musF; maltose transport system permease protein D Spico_1540 carbohydrate ABC transporter membrane protein 1, CUT1 family K25087 musF; maltose transport system permease protein D Spico_0445 carbohydrate ABC transporter membrane protein 2, CUT1 family K25088 musG; maltose transport system permease protein D Spico_1539 carbohydrate ABC transporter membrane protein 2, CUT1 family K25088 musG; maltose transport system permease protein D Spico_0893 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Spico_0259 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Spico_0895 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Spico_0260 carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Spico_0894 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Spico_0261 carbohydrate ABC transporter membrane protein 2, CUT1 family K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Spico_0723 carbohydrate ABC transporter substrate-binding protein, CUT1 family K10240 cebE; cellobiose transport system substrate-binding protein D Spico_0722 carbohydrate ABC transporter membrane protein 1, CUT1 family K10241 cebF; cellobiose transport system permease protein D Spico_0721 carbohydrate ABC transporter membrane protein 2, CUT1 family K10242 cebG; cellobiose transport system permease protein D Spico_1210 extracellular solute-binding protein family 1 K10192 togB; oligogalacturonide transport system substrate-binding protein D Spico_1209 binding-protein-dependent transport systems inner membrane component K10193 togM; oligogalacturonide transport system permease protein D Spico_1208 carbohydrate ABC transporter membrane protein 2, CUT1 family K10194 togN; oligogalacturonide transport system permease protein D Spico_1279 extracellular solute-binding protein family 1 K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein D Spico_1280 binding-protein-dependent transport systems inner membrane component K17242 aguF; alpha-1,4-digalacturonate transport system permease protein D Spico_1281 binding-protein-dependent transport systems inner membrane component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein D Spico_0500 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0058 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0385 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0714 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_1072 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_1532 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0362 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Spico_0383 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Spico_0056 carbohydrate ABC transporter membrane protein 1, CUT1 family K17319 lplB; putative aldouronate transport system permease protein D Spico_0364 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Spico_0494 carbohydrate ABC transporter membrane protein 1, CUT1 family K17319 lplB; putative aldouronate transport system permease protein D Spico_0716 carbohydrate ABC transporter membrane protein 1, CUT1 family K17319 lplB; putative aldouronate transport system permease protein D Spico_1071 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Spico_1534 carbohydrate ABC transporter membrane protein 1, CUT1 family K17319 lplB; putative aldouronate transport system permease protein D Spico_0057 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Spico_0382 carbohydrate ABC transporter membrane protein 2, CUT1 family K17320 lplC; putative aldouronate transport system permease protein D Spico_0493 carbohydrate ABC transporter membrane protein 2, CUT1 family K17320 lplC; putative aldouronate transport system permease protein D Spico_0715 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Spico_1070 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Spico_1533 carbohydrate ABC transporter membrane protein 2, CUT1 family K17320 lplC; putative aldouronate transport system permease protein D Spico_0363 carbohydrate ABC transporter membrane protein 2, CUT1 family K17320 lplC; putative aldouronate transport system permease protein D Spico_1400 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10540 mglB; methyl-galactoside transport system substrate-binding protein D Spico_1404 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10540 mglB; methyl-galactoside transport system substrate-binding protein D Spico_1398 monosaccharide ABC transporter membrane protein, CUT2 family K10541 mglC; methyl-galactoside transport system permease protein D Spico_1399 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D Spico_1659 rhamnose-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D Spico_1657 inner-membrane translocator K10560 rhaP; rhamnose transport system permease protein D Spico_1656 inner-membrane translocator K10561 rhaQ; rhamnose transport system permease protein D Spico_1658 Monosaccharide-transporting ATPase K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D Spico_1629 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein D Spico_1644 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_0014 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_0078 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_1814 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Spico_1403 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Spico_0097 bifunctional carbohydrate binding and transport protein K10439 rbsB; ribose transport system substrate-binding protein D Spico_1628 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_1645 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_0016 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_0079 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_1812 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein D Spico_0099 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Spico_0100 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Spico_1626 monosaccharide-transporting ATPase K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_0081 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_0098 Monosaccharide-transporting ATPase K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_0015 Monosaccharide-transporting ATPase K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_1627 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_1646 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_1813 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Spico_0335 monosaccharide ABC transporter substrate-binding protein, CUT2 family K23508 ytfQ; galactofuranose transport system substrate-binding protein D Spico_0338 monosaccharide ABC transporter membrane protein, CUT2 family K23509 ytfT; galactofuranose transport system permease protein D Spico_0337 monosaccharide ABC transporter membrane protein, CUT2 family K23509 ytfT; galactofuranose transport system permease protein D Spico_0336 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D Spico_1039 sugar ABC transporter (sugar-binding protein) K17213 K17213; inositol transport system substrate-binding protein D Spico_1037 inner-membrane translocator K17214 K17214; inositol transport system permease protein D Spico_1038 monosaccharide ABC transporter ATP-binding protein, CUT2 family K17215 K17215; inositol transport system ATP-binding protein D Spico_1415 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Spico_1413 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Spico_1414 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Spico_0869 extracellular solute-binding protein family 1 K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein D Spico_0669 extracellular solute-binding protein family 1 K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein D Spico_0868 carbohydrate ABC transporter membrane protein 1, CUT1 family K25677 yesP; pectin-derived oligosaccharide transport system permease protein D Spico_0667 carbohydrate ABC transporter membrane protein 1, CUT1 family K25677 yesP; pectin-derived oligosaccharide transport system permease protein D Spico_0867 carbohydrate ABC transporter membrane protein 2, CUT1 family K25678 yesQ; pectin-derived oligosaccharide transport system permease protein D Spico_0668 carbohydrate ABC transporter membrane protein 2, CUT1 family K25678 yesQ; pectin-derived oligosaccharide transport system permease protein D Spico_1112 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Spico_0062 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Spico_0064 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein D Spico_1110 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Spico_0065 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Spico_1109 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Spico_0063 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Spico_1111 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Spico_0173 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Spico_1049 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Spico_1383 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Spico_1487 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Spico_1739 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Spico_1737 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein D Spico_0174 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein D Spico_1048 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Spico_1368 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Spico_1384 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein D Spico_1486 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein D Spico_1367 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Spico_0175 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein D Spico_1047 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Spico_1385 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein D Spico_1485 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein D Spico_1736 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein D Spico_1259 monosaccharide ABC transporter substrate-binding protein, CUT2 family K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D Spico_1670 monosaccharide ABC transporter membrane protein, CUT2 family K02057 ABC.SS.P; simple sugar transport system permease protein D Spico_1671 monosaccharide ABC transporter membrane protein, CUT2 family K02057 ABC.SS.P; simple sugar transport system permease protein D Spico_1256 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein D Spico_1257 monosaccharide ABC transporter membrane protein, CUT2 family K02057 ABC.SS.P; simple sugar transport system permease protein D Spico_1672 monosaccharide ABC transporter ATP-binding protein, CUT2 family K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D Spico_1258 monosaccharide ABC transporter ATP-binding protein, CUT2 family K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D Spico_0435 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Spico_0436 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Spico_0437 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Spico_0438 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Spico_1408 amino acid ABC transporter substrate-binding protein, PAAT family K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D Spico_1406 amino acid ABC transporter membrane protein 2, PAAT family K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D Spico_1407 amino acid ABC transporter membrane protein 1, PAAT family K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D Spico_1409 amino acid ABC transporter ATP-binding protein, PAAT family K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D Spico_0879 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_1092 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_1580 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_0107 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Spico_0880 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Spico_1091 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Spico_1579 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Spico_0108 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Spico_0109 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_0881 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Spico_1090 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_1578 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Spico_0882 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_1089 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_1577 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_0110 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Spico_0111 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_0883 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_1088 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_1576 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Spico_0227 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Spico_0226 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Spico_0225 Sulfate-transporting ATPase K02071 metN; D-methionine transport system ATP-binding protein D Spico_0991 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Spico_0992 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Spico_0993 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Spico_0994 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein D Spico_0995 Phosphonate-transporting ATPase K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D Spico_0736 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Spico_0317 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Spico_0737 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Spico_0316 amino acid ABC transporter membrane protein, PAAT family K02029 ABC.PA.P; polar amino acid transport system permease protein D Spico_0739 amino acid ABC transporter membrane protein, PAAT family K02029 ABC.PA.P; polar amino acid transport system permease protein D Spico_0315 amino acid ABC transporter ATP-binding protein, PAAT family K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Spico_0740 amino acid ABC transporter ATP-binding protein, PAAT family K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Spico_1201 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Spico_1196 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Spico_1197 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Spico_1198 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Spico_1199 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Spico_1596 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Spico_1124 periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D Spico_1122 transport system permease protein K25283 yclO; iron-siderophore transport system permease protein D Spico_1121 transport system permease protein K25284 yclN; iron-siderophore transport system permease protein D Spico_1123 Iron-chelate-transporting ATPase K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D Spico_0072 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Spico_1668 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Spico_0223 ABC-3 protein K09816 znuB; zinc transport system permease protein D Spico_0224 Fe(3+)-transporting ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Spico_1007 BioY protein K03523 bioY; biotin transport system substrate-specific component D Spico_1114 cobalt transport protein K16783 bioN; biotin transport system permease protein D Spico_1113 Fe(3+)-transporting ATPase K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D Spico_1396 protein of unknown function DUF1393 K16924 mtsT; energy-coupling factor transport system substrate-specific component D Spico_1394 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Spico_1326 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Spico_1395 Monosaccharide-transporting ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Spico_1327 ABC transporter related protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Spico_0601 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Spico_0602 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Spico_1585 Fe(3+)-transporting ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Spico_0540 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Spico_0542 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Spico_0541 Phosphonate-transporting ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Spico_1496 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein D Spico_1494 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein D Spico_1495 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein D Spico_0249 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Spico_0709 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Spico_1203 Polyamine-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Spico_0710 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Spico_0565 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Spico_1609 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Spico_0250 Polyamine-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Spico_1354 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Spico_0161 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Spico_1355 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Spico_0160 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Spico_1764 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Spico_1012 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Spico_0996 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Spico_1849 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Spico_1548 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Spico_0369 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Spico_0376 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family D Spico_1508 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Spico_1685 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Spico_1509 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Spico_1589 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Spico_0753 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Spico_1116 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Spico_0091 formate/nitrite transporter K02598 nirC; nitrite transporter D Spico_1360 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D Spico_1819 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Spico_1021 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Spico_0162 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Spico_0589 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Spico_1584 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D Spico_0470 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein D Spico_1339 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter D Spico_1222 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Spico_0165 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Spico_0289 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Spico_1854 Na+/glutamate symporter-like protein K03312 gltS; glutamate:Na+ symporter, ESS family D Spico_1175 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein D Spico_1177 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Spico_1174 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Spico_1176 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Spico_1605 Xanthine/uracil/vitamin C permease K02824 uraA; uracil permease D Spico_0921 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Spico_1779 TRAP C4-dicarboxylate transport system permease DctM subunit K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D Spico_0604 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Spico_1219 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Spico_0772 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Spico_0773 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Spico_0678 protein of unknown function DUF165 K09125 yhhQ; queuosine precursor transporter D Spico_0391 protein of unknown function DUF165 K09125 yhhQ; queuosine precursor transporter D Spico_0301 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein D Spico_0651 cell cycle protein K03588 ftsW; cell division protein FtsW D Spico_0426 Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Spico_0318 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Spico_1173 glutaconyl-CoA decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Spico_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Spico_0959 FeoA family protein K04758 feoA; ferrous iron transport protein A D Spico_0960 FeoA family protein K04758 feoA; ferrous iron transport protein A D Spico_0961 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Spico_1480 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:scc02044] D Spico_1796 protein of unknown function YGGT K02221 yggT; YggT family protein D Spico_1311 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Spico_0499 beta-lactamase domain protein K02238 comEC; competence protein ComEC D Spico_0639 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Spico_0214 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Spico_1728 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Spico_0474 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Spico_1696 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Spico_0509 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Spico_0539 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Spico_0213 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Spico_0007 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:scc02042] D Spico_0162 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:scc02022] D Spico_0421 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Spico_0393 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Spico_0422 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Spico_0394 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Spico_1352 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Spico_1625 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_0178 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1382 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1402 multi-sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1740 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Spico_1624 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_0177 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1381 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1401 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1741 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1206 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Spico_1783 ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:scc02035] D Spico_0642 GTP-binding signal recognition particle SRP54 G-domain protein K02404 flhF; flagellar biosynthesis protein FlhF C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:scc04812] D Spico_0648 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Spico_0034 Tubulin/FtsZ GTPase K03531 ftsZ; cell division protein FtsZ D Spico_0649 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Spico_0746 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Spico_1863 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Spico_1862 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:scc04147] D Spico_1820 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG D Spico_1607 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Spico_1187 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Spico_0471 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Spico_0472 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Spico_0087 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Spico_0349 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Spico_1179 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Spico_0212 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Spico_1678 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Spico_1786 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Spico_0448 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Spico_1718 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Spico_1285 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Spico_1643 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Spico_0884 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0899 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0978 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0277 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Spico_0727 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Spico_0625 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Spico_1052 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Spico_0711 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Spico_0365 glycoside hydrolase family 29 (alpha-L-fucosidase) K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Spico_1232 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Spico_0431 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Spico_1557 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Spico_1782 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Spico_0158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Spico_1767 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Spico_1652 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Spico_0473 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Spico_0424 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:scc02048] D Spico_1131 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Spico_1155 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Spico_1132 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 D Spico_1125 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Spico_1154 CRISPR-associated helicase Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Spico_1126 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA D Spico_1127 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB D Spico_1129 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC D Spico_1130 CRISPR-associated protein Cas5 family K19125 casD; CRISPR system Cascade subunit CasD D Spico_1128 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE D Spico_1153 CRISPR-associated protein, Csy1 family K19127 csy1; CRISPR-associated protein Csy1 D Spico_1152 CRISPR-associated protein, Csy2 family K19128 csy2; CRISPR-associated protein Csy2 D Spico_1151 CRISPR-associated protein, Csy3 family K19129 csy3; CRISPR-associated protein Csy3 D Spico_1150 CRISPR-associated protein, Csy4 family K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D Spico_0553 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D Spico_0552 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Spico_0247 Site-specific DNA-methyltransferase (adenine-specific) K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Spico_0193 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D Spico_0185 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D Spico_0138 PspC domain protein K03973 pspC; phage shock protein C D Spico_0142 PspC domain protein K03973 pspC; phage shock protein C D Spico_1160 hypothetical protein K19165 phd; antitoxin Phd D Spico_0195 hypothetical protein K19165 phd; antitoxin Phd D Spico_0648 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Spico_0034 Tubulin/FtsZ GTPase K03531 ftsZ; cell division protein FtsZ D Spico_1817 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Spico_1818 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Spico_0982 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Spico_0525 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:scc01504] D Spico_0369 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Spico_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:scc00537] D Spico_0158 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Spico_1179 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:scc03100] D Spico_R0049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Spico_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Spico_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Spico_R0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Spico_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0056 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0047 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Spico_R0042 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Spico_R0007 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Spico_R0048 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Spico_R0043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Spico_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Spico_R0019 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Spico_R0026 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Spico_R0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Spico_R0014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Spico_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Spico_R0033 tRNA-His K14226 tRNA-His; tRNA His D Spico_R0003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Spico_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Spico_R0035 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Spico_R0027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Spico_R0046 tRNA-Met K14230 tRNA-Met; tRNA Met D Spico_R0051 tRNA-Met K14230 tRNA-Met; tRNA Met D Spico_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met D Spico_R0045 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Spico_R0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Spico_R0009 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Spico_R0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Spico_R0057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Spico_R0058 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Spico_R0054 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Spico_R0055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Spico_R0053 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Spico_R0021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Spico_R0015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Spico_R0052 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Spico_R0018 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Spico_R0010 tRNA-Val K14237 tRNA-Val; tRNA Val D Spico_R0011 tRNA-Val K14237 tRNA-Val; tRNA Val D Spico_R0013 tRNA-Val K14237 tRNA-Val; tRNA Val D Spico_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0031 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Spico_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Spico_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Spico_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Spico_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Spico_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Spico_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Spico_R0059 RNA component of signal recognition particle K01983 ffs; SRP RNA D Spico_R0017 RNA component of RNaseP K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Spico_1845 Gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D Spico_1247 NADP-dependent oxidoreductase domain protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D Spico_1519 Alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D Spico_1220 NADPH dehydrogenase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D Spico_1221 Peptide methionine sulfoxide reductase msrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Spico_1286 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Spico_1570 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Spico_0663 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Spico_0354 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D Spico_1118 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Spico_0845 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Spico_1549 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Spico_0115 glycyl-radical enzyme activating protein family K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Spico_1057 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Spico_0104 glycyl-radical enzyme activating protein family K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-] D Spico_1236 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Spico_0497 Sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D Spico_1834 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Spico_0945 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Spico_0210 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182] D Spico_1456 Conserved hypothetical protein CHP00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Spico_1588 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Spico_0983 hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D Spico_0136 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Spico_1568 thioesterase superfamily protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Spico_0776 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Spico_0468 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Spico_1242 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Spico_0924 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Spico_0713 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D Spico_1283 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Spico_0059 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Spico_0866 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Spico_1735 glycosyl hydrolase family 88 K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180] D Spico_0498 hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225] D Spico_1448 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Spico_1483 glycoside hydrolase family 57 K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Spico_0865 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Spico_0938 YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Spico_0400 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Spico_1664 RbsD or FucU transport K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D Spico_1655 L-rhamnose 1-epimerase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D Spico_0532 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Spico_0531 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Spico_1637 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Spico_0672 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D Spico_1377 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D Spico_1087 CBS domain containing membrane protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D Spico_0533 FMN-binding domain protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Spico_0534 RnfA-Nqr electron transport subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Spico_0535 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Spico_1760 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Spico_0449 protein of unknown function UPF0001 K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Spico_0303 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism D Spico_1553 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation D Spico_0752 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Spico_0792 Trigger factor K03545 tig; trigger factor D Spico_0578 SsrA-binding protein K03664 smpB; SsrA-binding protein D Spico_0664 magnesium chelatase ChlI subunit K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D Spico_0765 Resolvase domain protein K07450 K07450; putative resolvase D Spico_1838 Resolvase domain protein K07450 K07450; putative resolvase D Spico_1418 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Spico_0228 RmuC-domain protein K09760 rmuC; DNA recombination protein RmuC D Spico_0515 UPF0102 protein yraN K07460 yraN; putative endonuclease D Spico_0646 hypothetical protein K04096 smf; DNA processing protein D Spico_1104 SMF family protein K04096 smf; DNA processing protein D Spico_0791 Recombination protein MgsA K07478 ycaJ; putative ATPase D Spico_0738 Integrase catalytic region K07482 K07482; transposase, IS30 family D Spico_0764 transposase, IS605 OrfB family K07496 K07496; putative transposase D Spico_1837 transposase, IS605 OrfB family K07496 K07496; putative transposase D Spico_0833 hypothetical protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Spico_0140 phage shock protein A, PspA K03969 pspA; phage shock protein A D Spico_0143 phage shock protein A, PspA K03969 pspA; phage shock protein A B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Spico_1067 major facilitator superfamily MFS_1 K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Spico_1747 citrate/H+ symporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D Spico_0164 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Spico_1527 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D Spico_0049 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D Spico_0008 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein D Spico_0975 septation protein spoVG K06412 spoVG; stage V sporulation protein G C 99993 Cell motility C 99995 Signaling proteins D Spico_0749 GTP-binding protein TypA K06207 typA; GTP-binding protein D Spico_1543 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Spico_0467 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D Spico_0640 Peptidase M23 K06194 nlpD; lipoprotein NlpD D Spico_0287 protein of unknown function UPF0118 K11744 tqsA; AI-2 transport protein TqsA C 99994 Others D Spico_0439 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Spico_1808 CutC family protein K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D Spico_0637 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Spico_1446 Patatin K07001 K07001; NTE family protein D Spico_0297 Patatin K07001 K07001; NTE family protein D Spico_1683 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Spico_1763 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB D Spico_1762 SufBD protein K09015 sufD; Fe-S cluster assembly protein SufD D Spico_1513 aryldialkylphosphatase K07048 PTER; phosphotriesterase-related protein D Spico_1223 ribonuclease BN K07058 K07058; membrane protein D Spico_0256 protein PhnB K04750 phnB; PhnB protein D Spico_0205 LemA family protein K03744 lemA; LemA protein D Spico_1800 SlyX family protein K03745 slyX; SlyX protein C 99997 Function unknown D Spico_0118 Ankyrin K06867 K06867; uncharacterized protein D Spico_1755 Radical SAM domain protein K06871 K06871; uncharacterized protein D Spico_0408 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Spico_1634 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein D Spico_1757 hypothetical protein K06889 K06889; uncharacterized protein D Spico_0789 protein of unknown function UPF0005 K06890 K06890; uncharacterized protein D Spico_0620 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Spico_1020 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Spico_0511 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein D Spico_1034 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein D Spico_1484 amidohydrolase 2 K07045 K07045; uncharacterized protein D Spico_1093 Nucleotidyltransferase K07074 K07074; uncharacterized protein D Spico_1528 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Spico_1756 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Spico_1225 metallophosphoesterase K07095 K07095; uncharacterized protein D Spico_0373 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Spico_0480 phosphoribosyl transferase domain protein K07101 K07101; uncharacterized protein D Spico_1295 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Spico_1746 membrane protein AbrB duplication K07120 K07120; uncharacterized protein D Spico_0267 hypothetical protein K07133 K07133; uncharacterized protein D Spico_0974 uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein D Spico_1445 Radical SAM domain protein K07139 K07139; uncharacterized protein D Spico_0235 protein of unknown function DUF554 K07150 K07150; uncharacterized protein D Spico_0617 protein of unknown function DUF164 K07164 K07164; uncharacterized protein D Spico_0966 UPF0161 protein yidD K08998 K08998; uncharacterized protein D Spico_1544 UPF0210 protein K09157 K09157; uncharacterized protein D Spico_1230 hypothetical protein K09160 K09160; uncharacterized protein D Spico_0947 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein D Spico_0067 protein of unknown function DUF985 K09705 K09705; uncharacterized protein D Spico_0888 UPF0178 protein yaiI K09768 K09768; uncharacterized protein D Spico_0735 acid phosphatase/vanadium-dependent haloperoxidase related protein K09775 K09775; uncharacterized protein D Spico_0368 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Spico_1306 protein of unknown function DUF541 K09807 K09807; uncharacterized protein D Spico_1390 protein of unknown function DUF1006 K09927 K09927; uncharacterized protein D Spico_1632 putative ABC transporter permease K01163 K01163; uncharacterized protein D Spico_0163 putative phosphate transport regulator K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024