+D #

  Transfer RNA Biogenesis - Serratia liquefaciens

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors C CCA adding factors D M495_21580 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D M495_17585 gltX; glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D M495_19590 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D M495_02850 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D M495_05390 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D M495_07380 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D M495_05530 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D M495_14025 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D M495_20300 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D M495_13965 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D M495_03555 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D M495_16220 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D M495_08175 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D M495_10615 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D M495_07985 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D M495_05080 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D M495_02130 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D M495_18590 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D M495_10635 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D M495_10640 pheT; phenylalanyl-tRNA synthetase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D M495_11035 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D M495_23185 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D M495_06495 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D M495_24395 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors D M495_09265 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D M495_21050 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D M495_19585 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] C Psudouridine synthases D M495_17130 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D M495_01790 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D M495_03480 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors D M495_18675 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D M495_22760 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D M495_01475 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D M495_24865 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D M495_24575 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D M495_13640 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors D M495_01590 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D M495_24875 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] B 3'processing and CCA adding factors C 3'processing factors D M495_10930 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D M495_24320 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D M495_13170 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D M495_13850 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] C CCA adding factors D M495_21580 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors D M495_20790 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] B tRNA transport factors C tRNA export factors D M495_02715 heme ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D M495_05390 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D M495_19590 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D M495_11035 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D M495_23185 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D M495_06495 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D M495_10615 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D M495_02850 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D M495_20300 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D M495_03555 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D M495_16220 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D M495_02130 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D M495_07380 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D M495_07985 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D M495_13965 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D M495_00175 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D M495_00180 glyS; glycyl-tRNA synthetase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D M495_05080 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D M495_17585 gltX; glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D M495_05530 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D M495_14025 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D M495_10635 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D M495_10640 pheT; phenylalanyl-tRNA synthetase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D M495_18590 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D M495_08175 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D M495_20805 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] C Trans-editing factors D M495_24395 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D M495_04990 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] B tRNA modification factors C Deaminases D M495_18810 adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases D M495_22420 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D M495_22270 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D M495_06075 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] C Methylthiotransferases D M495_05455 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] C Methyltransferases D M495_13990 rRNA cytosine-C5-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D M495_13995 tRNA methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D M495_08130 S-adenosyl-L-methionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D M495_02770 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D M495_23930 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D M495_21050 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D M495_03630 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D M495_24865 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D M495_19500 methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D M495_24365 tRNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D M495_18685 tRNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D M495_24150 rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D M495_19585 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D M495_19195 tRNA (adenine-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] C Psudouridine synthases D M495_17130 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D M495_01790 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D M495_19780 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D M495_03480 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D M495_20570 RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D M495_03005 23S rRNA/tRNA pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] C Thiolation factors D M495_09900 mnmA; thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D M495_13010 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D M495_00865 sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D M495_22990 sulfur transfer complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D M495_22995 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D M495_23000 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D M495_08345 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D M495_18665 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein D M495_18675 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D M495_20360 ygfZ; global regulator K06980 ygfZ; tRNA-modifying protein YgfZ C KEOPS/EKC complex C Other tRNA modification factors D M495_24575 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D M495_01475 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D M495_02110 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D M495_17285 mnmC; tRNA methyltransferase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D M495_04525 queA; S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D M495_04735 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D M495_03400 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D M495_03395 coenzyme PQQ biosynthesis protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D M495_21110 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D M495_01450 iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D M495_13440 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D M495_13640 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D M495_13635 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D M495_04530 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D M495_04630 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D M495_19625 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D M495_18070 methionine tRNA cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D M495_13865 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D M495_22760 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D M495_21615 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D M495_01460 ADP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D M495_19860 sulfur acceptor protein CsdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase B tRNA degradation factors C M495_01515 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C M495_01800 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C M495_18310 twitching motility protein PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024